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Alignment for radish unigene UN17709

               1      -     51
UN17709        --> GGGCCGCCAAGGACCGAGCTTCGTCTTCAGGTTCCTCGAGAAAGAACAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727798       <-- ..................................................
FD544899       <-- ..................................................
FD566954       <-- ..................................................
FD575013       <-- ..................................................
EY937326       <-- ..................................................
FD960776       <-- ..................................................
EY911269       <-- ..................................................
EY915419       --> GGGCCGCCAAGGACCGAGCTTCGTCTTCAGGTTCCTCGAGAAAGAACAGT
FD964892       --> ..................................................
FD571133       --> ..................................................
FD548756       --> ..................................................
FD964216       --> ..................................................
EY941828       --> ..................................................

               51     -    101
UN17709        --> TCGAGCCGACGACGAACAGAACCTACGGTTCTATCTTGAGTAACCTGACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727798       <-- ..................................................
FD544899       <-- ..................................................
FD566954       <-- ..................................................
FD575013       <-- ..................................................
EY937326       <-- ..................................................
FD960776       <-- ..................................................
EY911269       <-- ..................................................
EY915419       --> TCGAGCCGACGACGAACAGAACCTACGGTTCTATCTTGAGTAACCTGACT
FD964892       --> ..................................................
FD571133       --> ..................................................
FD548756       --> ..................................................
FD964216       --> ..................................................
EY941828       --> ..................................................

               101    -    151
UN17709        --> TTTGTAAAGACGTTTGCTTCAGGGATCATTGTCCCCAAGTCTTACGTGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727798       <-- ..................................................
FD544899       <-- ..................................................
FD566954       <-- ..................................................
FD575013       <-- ..................................................
EY937326       <-- ..................................................
FD960776       <-- ..................................................
EY911269       <-- ..................................................
EY915419       --> TTTGTAAAGACGTTTGCTTCAGGGATCATTGTCCCCAAGTCTTACGTGTT
FD964892       --> ..................................................
FD571133       --> ..................................................
FD548756       --> ..................................................
FD964216       --> ..................................................
EY941828       --> ..................................................

               151    -    201
UN17709        --> GCCACTCGATGACAAGCAGTACTTGCTTCCCGCCACATCTTTGGTTCAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727798       <-- ..................................................
FD544899       <-- ..................................................
FD566954       <-- ..................................................
FD575013       <-- ..................................................
EY937326       <-- ..................................................
FD960776       <-- ..................................................
EY911269       <-- ..................................................
EY915419       --> GCCACTCGATGACAAGCAGTACTTGCTTCCCGCCACATCTTTGGTTCAAG
FD964892       --> ..................................................
FD571133       --> ..................................................
FD548756       --> ..................................................
FD964216       --> ..................................................
EY941828       --> ..................................................

               201    -    251
UN17709        --> ATGCACACTGAGCAGGGCTTGAAGTGTTTGTGTCAGGGTTTGCAAATGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727798       <-- ..................................................
FD544899       <-- ..................................................
FD566954       <-- ..................................................
FD575013       <-- ..................................................
EY937326       <-- ..................................................
FD960776       <-- ..................................................
EY911269       <-- ..................................................
EY915419       --> ATGCACACTGAGCAGGGCTTGAAGTGTTTGTGTCAGGGTTTGCAAATGAT
FD964892       --> ..................................................
FD571133       --> ..................................................
FD548756       --> ..................................................
FD964216       --> ..................................................
EY941828       --> ..................................................

               251    -    301
UN17709        --> GTCGATATCGCACACGACTACAGTTTTGATCCGGTCTCTGAGTATCTGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727798       <-- ..................................................
FD544899       <-- ..................................................
FD566954       <-- ..................................................
FD575013       <-- ..................................................
EY937326       <-- ..................................................
FD960776       <-- ..................................................
EY911269       <-- ..................................................
EY915419       --> GTCGATATCGCACACGACTACAGTTTTGATCCGGTCTCTGAGTATCTGTC
FD964892       --> ..................................................
FD571133       --> ..................................................
FD548756       --> ..................................................
FD964216       --> ..................................................
EY941828       --> ..................................................

               301    -    351
UN17709        --> TTTTATGGACTATGGCAACTTCTCTGTCGATGGTGTGCTCTCTGACTTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727798       <-- ..................................................
FD544899       <-- ..................................................
FD566954       <-- ..................................................
FD575013       <-- ..................................................
EY937326       <-- ..................................................
FD960776       <-- ..................................................
EY911269       <-- ..................................................
EY915419       --> TTTTATGGACTATGGCAACTTCTCTGTCGATGGTGTGCTCTCTGACTTTC
FD964892       --> ........acaATGGCAACTTCTCTGTCGATGGTGTGCTCTCTGACTTTC
FD571133       --> .............GGCAACTTCTCTGTAGATGGTGTGCTCTCTGACTTTC
FD548756       --> ..................................................
FD964216       --> ..................................................
EY941828       --> ..................................................

               351    -    401
UN17709        --> CCATAACTGCATCTGCATCCATCGAATGCTTCTCCCACGTGGCCAGAAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727798       <-- ..................................................
FD544899       <-- ..................................................
FD566954       <-- ..................................................
FD575013       <-- ..................................................
EY937326       <-- ..................................................
FD960776       <-- ..................................................
EY911269       <-- ..................................................
EY915419       --> CCATAACTGCATCTGCATCCATCGAATGCTTCTCCCACGTGGCCAGAAAC
FD964892       --> CCATAACTGCATCTGCATCAGTTGAATGCTTCTCCCACGTGGCCAGAAAC
FD571133       --> CCATAACTGCATCTGCATCCATCGAATGCTTCTCCCACGTGGCCAGAAAC
FD548756       --> ..................................................
FD964216       --> ..................................................
EY941828       --> ..................................................

               401    -    451
UN17709        --> GCAACAAAACAAGTGGATTTTCTTGTGATATCAAAAAACGGTGCGAGTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727798       <-- ..................................................
FD544899       <-- ..................................................
FD566954       <-- ..................................................
FD575013       <-- ..................................................
EY937326       <-- ..................................................
FD960776       <-- ..................................................
EY911269       <-- ..................................................
EY915419       --> GCAACAAAACAAGTGGATTTTCTTGTGATATCAAAAAACGGTGCGAGTGG
FD964892       --> GCAACAAAACAAGTGGATTTTCTTGTGATATCAAAAAATGGTGCGAGTGG
FD571133       --> GCAACAAAACAAGTGGATTTTCTTGTGATATCAAAAAACGGTGCGAGTGG
FD548756       --> ..................................................
FD964216       --> ..................................................
EY941828       --> ..................................................

               451    -    501
UN17709        --> AGACTATCCAGGATGTACAAACTTGGCATACGAGAAGGCAATCAACGATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727798       <-- ..................................................
FD544899       <-- ..................................................
FD566954       <-- ..................................................
FD575013       <-- ..................................................
EY937326       <-- ..................................................
FD960776       <-- ..................................................
EY911269       <-- ..................................................
EY915419       --> AGACTATCCGGGATGTACAAACTTGGCATACGAGAAGGCAATCAACGATG
FD964892       --> AGACTATCCAGGATGTACAAACTTGGCATACGAGAAGGCAATCAATGATG
FD571133       --> AGACTATCCAGGATGTACAAACTTGGCATACGAGAAGGCAATCAACGATG
FD548756       --> ..................................................
FD964216       --> ..................................................
EY941828       --> ..................................................

               501    -    551
UN17709        --> GTGCTGATGTCATCGACTGCTCGGTCCAAATGTCCAGCGACGGTAAACCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727798       <-- ..................................................
FD544899       <-- ..................................................
FD566954       <-- ..................................................
FD575013       <-- ..................................................
EY937326       <-- ..................................................
FD960776       <-- ..................................................
EY911269       <-- ..................................................
EY915419       --> GTGCTGATGTCATCGACTGCTCGGTCCAAATGTCCAGCGACGGTAAACCT
FD964892       --> GTGCTGATGTCATCGACTGCTCGGTCCAAATGTCCAGCGACGGTAAACCT
FD571133       --> GTGCTGATGTCATCGACTGCTCGGTCCAAATGTCCAGCGACGGTAAACCT
FD548756       --> ..................................................
FD964216       --> ..................................................
EY941828       --> ..................................................

               551    -    601
UN17709        --> TTTTGTTTAAGTTCTATCGATCTCGGGAACACCACGACGGTCGCTCAATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727798       <-- ..................................................
FD544899       <-- ..................................................
FD566954       <-- ..................................................
FD575013       <-- ..................................................
EY937326       <-- ..................................................
FD960776       <-- ..................................................
EY911269       <-- ..................................................
EY915419       --> TTTTGTTTAAGTTCTATCGATCTCGGGAACACCACGACGGTCGCTCAATC
FD964892       --> TTTTGTTTAAGTTCTATCGATCTCGGGAACACCACGACGGTCGCTCAATC
FD571133       --> TTTTGTTTAAGTTCTATCGATCTCGGGAACACCACGACGGTCGCTCAATC
FD548756       --> .........................GGAACACCACGACGGTCGCTCAATC
FD964216       --> ..................................................
EY941828       --> ..................................................

               601    -    651
UN17709        --> TCCTCTCAGAAACCGTTCTACAAGTGTTCCTGAGTTTAGCTCAGTTAATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727798       <-- ..................................................
FD544899       <-- ..................................................
FD566954       <-- ..................................................
FD575013       <-- ..................................................
EY937326       <-- ..................................................
FD960776       <-- ..................................................
EY911269       <-- ..................................................
EY915419       --> TCCTCTCAGAAACCGTTCTACAAGTGTTCCTGAGTTTAGCTCAGTTAATG
FD964892       --> TCCTCTCAGAAACCGTTCTACAAGTGTTCCTGAGTTTAGCTCAGTTAATG
FD571133       --> TCCTCTCAGAAACCGTTCAACAAGTGTTCCTGAGTTTAGCTCAGTTAATG
FD548756       --> TCCTCTCAGAAACCGTTCTACAAGTGTTCCTGAGTTTAGCTCAGTTAACG
FD964216       --> ..................................................
EY941828       --> ..................................................

               651    -    701
UN17709        --> GAATATATACTTTTAGTCTCACATGGCCTGAGATCCAGACCTTGACTCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727798       <-- ..................................................
FD544899       <-- ..................................................
FD566954       <-- ..................................................
FD575013       <-- ..................................................
EY937326       <-- ..................................................
FD960776       <-- ..................................................
EY911269       <-- ..................................................
EY915419       --> GAATATATACTTTTAGTCTCACATGGCCTGAGATCCAGACCTTGACTCCT
FD964892       --> GGATATATACTTTTAGTCTCACATGGCCTGAGATCCAGACCTTGACTCCT
FD571133       --> GAATATATACTTTTAGTCTCACATGGCCTGAGATCCAGACCTTGACTCCT
FD548756       --> GAATATATACTTTTAGTCTCACATGGCCTGAGATCCAGACCTTGACTCCT
FD964216       --> ..................................................
EY941828       --> ..................................................

               701    -    751
UN17709        --> GCTATTTCAAACCCCTACAGCAGTCTATACCAGATATTTAGGAATCCAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727798       <-- ..................................................
FD544899       <-- ..................................................
FD566954       <-- ..................................................
FD575013       <-- ..................................................
EY937326       <-- ..................................................
FD960776       <-- ..................................................
EY911269       <-- ..................................................
EY915419       --> GCTATTTCAAGCCCCTACAGCAGTCTATACCAGAT...............
FD964892       --> GCTATTTCAAACCCCTACAGCAGTCTATACCAGATATTTAGGAATCCAAA
FD571133       --> GCTATTTCAAACCCCTACAGCAGTCTATACCAGATATTTAGGAATCCAAA
FD548756       --> GCTATTTCAAACTCCTACAGCAGTCTATACCAGATATTTAGGAATCCAAA
FD964216       --> ..................................................
EY941828       --> ..................................................

               751    -    801
UN17709        --> CGAGAGAAACTCTGGCAAGTTTCTTTCGCTTTCTGAGTTCCTGAACTTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727798       <-- ..................................................
FD544899       <-- ..................................................
FD566954       <-- ..................................................
FD575013       <-- ..................................................
EY937326       <-- ..................................................
FD960776       <-- ..................................................
EY911269       <-- ..................................................
EY915419       --> ..................................................
FD964892       --> CGAGAGAAACTCTGGCAAGTTTCTTTCGCTTTCTGAGTTCCTAAACTTGG
FD571133       --> CGAGAGAAACTCTGGCAAGTTTCTTTCGCTGTCTGAGTTCCTGAACTTGG
FD548756       --> CGAGAGAAACTCTGGCAAGTTTCTTTCGCTTTCTGAGTTCCTGAACTTGG
FD964216       --> ..................................................
EY941828       --> ..................................................

               801    -    851
UN17709        --> CAAAGAACTCCACCACTCTCTCCGGTGTTTTGATCAGTGTTGAGAATGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727798       <-- ..................................................
FD544899       <-- ..................................................
FD566954       <-- ..................................................
FD575013       <-- ..................................................
EY937326       <-- ..................................................
FD960776       <-- ..................................................
EY911269       <-- ..................................................
EY915419       --> ..................................................
FD964892       --> CAAAGAACTCCACCACTCTCTCCGGTGTTTTGATCAGTGTTGAGAATGCA
FD571133       --> CAAAGAACTCCACCACTCTCTCCGGTGTTTTGATCAGTGTTGAGAATGCA
FD548756       --> CAAAGAACTCCACCACTCTCTCCGGTGTTTTGATCAGTGTTGAGAATGCA
FD964216       --> ..................................................
EY941828       --> ..................................................

               851    -    901
UN17709        --> GCATACCTGAGAGAGAAGCAAGGGCTCGACGTGGTCAAAGCGGTTCTTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727798       <-- ..................................................
FD544899       <-- ..................................................
FD566954       <-- ..................................................
FD575013       <-- ..................................................
EY937326       <-- ..................................................
FD960776       <-- ..................................................
EY911269       <-- ..................................................
EY915419       --> ..................................................
FD964892       --> GCATACCTGAGAGAGAAGCAAGGGCTCGACGTGGTCAAAGCGGTTCTTGA
FD571133       --> GCATACCTGAGAGAGAAGCAAGGGCTCGACGTGGTCAAAGCGGTTCTTGA
FD548756       --> GCATACCTGAGAGAGAAGCAAGGGCTCGACGTGGTCAAAGCGGTTCTTGA
FD964216       --> ...............................gGGTCAAAGCGGTTCTTGA
EY941828       --> ..................................................

               901    -    951
UN17709        --> TGCACTCACAGAGACTGGTTACAGCAATAGAACAACCACAAA-GGTCATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727798       <-- .....................CAGCAATAGAACAACCACAAAAGGTCATG
FD544899       <-- ..................................................
FD566954       <-- ..................................................
FD575013       <-- ..................................................
EY937326       <-- ..................................................
FD960776       <-- ..................................................
EY911269       <-- ..................................................
EY915419       --> ..................................................
FD964892       --> TGCACTCACAGAGACTGGTTACAGCAATAGAACAACCACAAA-GGTCATG
FD571133       --> TGCACTCACAGAGACTGGATACAGCAATAGAACAACCACAAA-GGTCATG
FD548756       --> TGCACTCACAGAGACTGGATACAGCAATAGAACAACCACAAA-GGTCATG
FD964216       --> TGCACTCACAGAGACTGGTTACAGCAACAGAACAACCACAAA-GGTCATG
EY941828       --> ..................................................

               951    -   1001
UN17709        --> ATTCAGTCAACAAACAGCTCGGTTCTAGTTGACTTCAAGAAGCAGAGCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727798       <-- ATTCAGTCAACAAACAGCTCGGTTCTAGTTGACTTCAAGAAGCAGAGCAA
FD544899       <-- ...............AGCTCGGT-CTAGT-GACTTCAAGAAGCAGAGCCG
FD566954       <-- ..................................................
FD575013       <-- ..................................................
EY937326       <-- ..................................................
FD960776       <-- ..................................................
EY911269       <-- ..................................................
EY915419       --> ..................................................
FD964892       --> ATTCAGTCAACAAACAGCTCGGTTCTAGTTGACTTCAAGAAGCA......
FD571133       --> ATTCAGTCAACAAACAGCTCGGTTCTAGTTGACTTCA-GAAGCAGAGCAA
FD548756       --> ATTCAGTCAACAAACAGCTCGGTTCTAGTTGACTTCAAGAAGCAGAGCCG
FD964216       --> ATTCAGTCAACAAACAGCTCGGTTCTAGTTGACTTCAAGAAGCAGAGCAA
EY941828       --> ..................................................

               1001   -   1051
UN17709        --> GTACGAGACTGTGTACAAAGTTGAAGAAACCATCCGTGATATTCTCGACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727798       <-- GTACGAGACTGTGTACAAAGTTGAAGAAACCATCCGTGATATTCTCGACT
FD544899       <-- GTACGAGACTGTGTACAAAGTTGAAGAAACCATCCGTGATATTCTCGACT
FD566954       <-- ..................................................
FD575013       <-- ..................................................
EY937326       <-- ..................................................
FD960776       <-- ..................................................
EY911269       <-- ..................................................
EY915419       --> ..................................................
FD964892       --> ..................................................
FD571133       --> GTACGAGACTGTGT....................................
FD548756       --> GTACGAGACTGTGTACAAAGTTGAAGAAACCATCCGTGATATTCTCGACT
FD964216       --> GTACGAGACTGTGTACAAAGTTGAAGAAACCATCCGTGATATTCTCGACT
EY941828       --> ...........................gACCATCCGTGATATTCTCGACT

               1051   -   1101
UN17709        --> CTGCTATCGAAGACATTAAGAAGTTCGCTAATGCTGTTGTCCTTGTGAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727798       <-- CTGCTATCGAAGACATTAAGAAGTTCGCTAATGCTGTTGTCCTTGTGAAA
FD544899       <-- CTGCTATCGAAGACATTAAGAAGTTTGCTAATGCTGTTGTCCTTGTGAAA
FD566954       <-- .............................................TGAAA
FD575013       <-- ..................................................
EY937326       <-- ..................................................
FD960776       <-- ..................................................
EY911269       <-- ..................................................
EY915419       --> ..................................................
FD964892       --> ..................................................
FD571133       --> ..................................................
FD548756       --> CTGCTATCGAAGACATTAAGAAGTTTGCTAATGCTGTTGTCCTTGTGAAA
FD964216       --> CTGCTATCGAAGACATTAAGAAGTTCGCTAATGCTGTTGTCCTTGTGAAA
EY941828       --> CTGCTATCGAAGACATTAAGAAGTTCGCTAATGCTGTTGTCCTTGTGAAA

               1101   -   1151
UN17709        --> AAATCAGTCTTTCCGGTCGTTGGTGGGTTCGTCACAGGGCAAACAAATGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727798       <-- AAATCAGTCTTTCCGGTCGTTGGTGGGTTCGTCACAGGGCAAACAAATGT
FD544899       <-- AAATCAGTCTTTCCGGTCGTTGGTGGGTTCGTCACAGGGCAAACAAATTT
FD566954       <-- AAATCAGTCTTTCCGGTCGTTGGTGGGTTCGTCACAGGGCAAACAAATGT
FD575013       <-- ................................CACAGGGCAAACAAATGT
EY937326       <-- .......................................CAAACAAATGT
FD960776       <-- ..................................................
EY911269       <-- ..................................................
EY915419       --> ..................................................
FD964892       --> ..................................................
FD571133       --> ..................................................
FD548756       --> AAATCAGTCTTTCCGGTCGTTGGTGGGTTCGTCACAGGGCAAACAAATTT
FD964216       --> AAATCAGTCTTTCCGGTCGTTGGTGGGTTCGTCACTGGGCAAACAAATGT
EY941828       --> AAATCAGTCTTTCCGGTCGTTGGTGGGTTCGTCACAGGGCAAACAAATGT

               1151   -   1201
UN17709        --> GGTGGAGAGGCTACAGAAGTCTCGGCTCCCAGTTTACGTGGAGCTGTTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727798       <-- GGTGGAGAGGCTACAGAAGTCTCGGCTCCCAGTTTACGTGGAACTGTTCC  Raphanus sativus cv Early Scarlet Globe
FD544899       <-- GGTGGAGAGGCTACAGAAGTCTCGGCTCCCAGTTTACGTGGAGCTGTTCC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD566954       <-- GGTGGAGAGGCTGCAGAAGTCTCGGCTCCCAGTATACGTGGAGCTGTTCC  Raphanus sativus var. oleiformis
FD575013       <-- GGTGGAGAGGCTACAGAAGTCTCGGCTCCCAGTTTACGTGGAACTGTTCC  Raphanus sativus cv Early Scarlet Globe
EY937326       <-- GGTGGAGAGGCTACAGAAGTCTCGGCTCCCAGTTTACGTGGAACTGTTCC  Raphanus sativus cv Early Scarlet Globe
FD960776       <-- .....AGAGGCTGCAGAAGTCTCGGCTCCCAGTATACGTGGAGCTGTTCC  Raphanus raphanistrum subsp. maritimus
EY911269       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY915419       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD964892       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD571133       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD548756       --> GGTGGAGAGGCTACAGAAGTCTCGGCTCCCAGTTTACGTGGAGCTGTTCC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD964216       --> GGTGGAGAGGCTACAGAAGTCTCGGCTCCCAGTTTACGTGGAGCTGTTCC  Raphanus raphanistrum subsp. maritimus
EY941828       --> GGTGGAGAGGCTACAGAAGTCTCGGCTCCCAGTTTACGTGGAACTGTTCC  Raphanus sativus cv Early Scarlet Globe

               1201   -   1251
UN17709        --> AGAATGAGTTTATATCTCAACCGTATGACTTCTTCTCTGACGCAACTGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727798       <-- AGAATGAGTTTATATCTCAACCGTATGACTTCTTCTCTGACGCAACTGTT
FD544899       <-- AGAATGAGTTTATATCTCAACCGTATGACTTCTTCTCTGACGCAACTGTT
FD566954       <-- AGAACGAGTTTATATCTCAACCATATGACTTCTTCTCTGACGCAACTGTT
FD575013       <-- AGAATGAGTTTATATCTCAACCGTATGACTTCTTCTCTGACGCAACTGTT
EY937326       <-- AGAATGAGTTTATATCTCAACCGTATGACTTCTTCTCTGACGCAACTGTT
FD960776       <-- AGAACGAGTTTATATCTCAACCATATGACTTCTTCTCTGACGCAACTGTT
EY911269       <-- ..................................................
EY915419       --> ..................................................
FD964892       --> ..................................................
FD571133       --> ..................................................
FD548756       --> AGAATGAGTTTATATCTCAACCGTATGACTTCTTCTCTGACGCAACTGTT
FD964216       --> AGAATGAGTTTATATCTCAACCGTATGACTTCTTCTCTGACGCAACTGTT
EY941828       --> AGAATGAGTTTATATCTCAACCGTATGACTTCTTCTCTGACGCAACTGTT

               1251   -   1301
UN17709        --> GAGATAAACTCGTATGTCACTGGACCCGGTATAAATGGAACCATCACCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727798       <-- GAGATAAACTCGTATGTCACTGGACCCGGTATAAATGGAACCATCACCGA
FD544899       <-- GAGATAAACTCGTATGTCACTGGACCCGGTATAAATGGAACCATCACCGA
FD566954       <-- GAGATAAACTCGTATGTCACTGGACCCGGTATAAATGGAACCATCACCGA
FD575013       <-- GAGATAAACTCGTATGTCACTGGACCCGGTATAAATGGAACCATCACCGA
EY937326       <-- GAGATAAACTCGTATGTCACTGGACCCGGTATAAATGGAACCATCACCGA
FD960776       <-- GAGATAAACTCGTATGTCACTGGACCCGGTATAAATGGAACCATCACCGA
EY911269       <-- ................TCACTGGACCCGGTATAAATGGAACCATCACCGA
EY915419       --> ..................................................
FD964892       --> ..................................................
FD571133       --> ..................................................
FD548756       --> GAGATAAACTCGTATGTCACTGGACCCGGTATAAATGGAACCATCACCGA
FD964216       --> GAGATAAACTCGTATGTCACTGGACCCGGTATAAATGGAACCATCACCGA
EY941828       --> GAGATAAACTCGTATGTCACTGGACCCGGTATAAATGGAACCATCACCGA

               1301   -   1351
UN17709        --> GTTCCCATTCACAGCTGCAAGATACAGAAGGAATATATGTTTGGCCAGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727798       <-- GTTCCCATTCACAGCTGCAAGATACAGAAGGAATATATGTTTGGCCAGCA  Raphanus sativus cv Early Scarlet Globe
FD544899       <-- GTTCCCATTCACAGCTGCAAGATACAGAAGGAATAAATGTTTGGCCAGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD566954       <-- GTTCCCATTCACAGCTGCAAGATACAGAAGGAATCGATGTTTGGCCAGCA  Raphanus sativus var. oleiformis
FD575013       <-- GTTCCCATTCACAGCTGCAAGATACAGAAGGAATATATGTTTGGCCAGCA  Raphanus sativus cv Early Scarlet Globe
EY937326       <-- GTTCCCATTCACAGCTGCAAGATACAGAAGGAATATATGTTTGGCCAGCA  Raphanus sativus cv Early Scarlet Globe
FD960776       <-- GTTCCCATTCACAGCTGCAAGATACAGAAGGAATCGATGTTTGGCCAGCA  Raphanus raphanistrum subsp. maritimus
EY911269       <-- GTTCCCATTCACAGCTGCAAGATACAGAAGGAATAAATGTTTGGCCAGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY915419       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD964892       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD571133       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD548756       --> GTTCCCATTCACAGCTGCA-GATACAGAAGGAATAAATG...........  Raphanus raphanistrum subsp. raphanistrum (NY)
FD964216       --> GTTCCCATTCACAGCTGCAAGATACAGAAGGAATCGATGTTTGGCCAGCA  Raphanus raphanistrum subsp. maritimus
EY941828       --> GTTCCCATTCACAGCTGCAAGATACAGAAGGAATATATGTTTGGCCAGCA  Raphanus sativus cv Early Scarlet Globe

               1351   -   1401
UN17709        --> AAGAAACGCTACCTTACATGGCCCCTGTCCAACCCGGTGGCCTCTTACAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727798       <-- AAGAAACGCTACCTTACATGGCCCCTGTCCGACCCGGTGGCCTCTTACAA
FD544899       <-- AAGAAACGCTACCTTACATGGCCCCTGTCCAACCCGGTGGCCTCTTACAA
FD566954       <-- AAGAAACTCCATCTTACATGGCCCCTGTCGAACCCGGTGGCCTCTTAAAA
FD575013       <-- AAGAAACGCTACCTTACATGGCCCCTGTCCAACCCGGTGGCCTCTTACAA
EY937326       <-- AAGAAACGCTACCTTACATGGCCCCTGCCCAACCCGGTGGCCTCTTACAA
FD960776       <-- AAGAAACTCCATCTTACATGGCCCCTGTCGAACCCGGTGGCCTCTTAAAA
EY911269       <-- AAGAAACGCTACCTTACATGGCCCCTGTCCAACCCGGTGGCCTCTTACAA
EY915419       --> ..................................................
FD964892       --> ..................................................
FD571133       --> ..................................................
FD548756       --> ..................................................
FD964216       --> AAGAAACTCCATCTTACATGGCCCCTGTCGAACCCGGTGGCCTCTTAAAA
EY941828       --> AAGAAACGCTACCTTACATGGCCCCTGCCCAACCCGGTGGCCTCTTACAA

               1401   -   1451
UN17709        --> GTTGTGAATCCTGCGGCCTTGCCTCCAGCTCAAGCTCCAAACCCTGTATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727798       <-- GTTGTGAATCCTGCGGCCTTGCCTCCAGCTCAAGCTCCAAACCCTGTATT
FD544899       <-- GTTGTGAGTCCTGCGGCCTTGCCTCCAGCTCAAGCTCCAAACCCTGTATT
FD566954       <-- GTTGTGAATCCTGCGGCCTTGCCTCCAGCTCAAGCTCCAAACCCTGTTTT
FD575013       <-- GTTGTGAATCCTGCGGCCTTGCCTCCAGCTCAAGCTCCAAACCCTGTATT
EY937326       <-- GTTGTGAATCCTGCGGCCTTGCCTCCAGCTCAAGCTCCAAACCCTGTATT
FD960776       <-- GTTGTGAATCCTGCGGCCTTGCCTCCAGCTCAAGCTCCAAACCCTGTTTT
EY911269       <-- GTTGTGAGTCCTGCGGCCTTGCCTCCAGCTCAAGCTCCAAACCCTGTATT
EY915419       --> ..................................................
FD964892       --> ..................................................
FD571133       --> ..................................................
FD548756       --> ..................................................
FD964216       --> GTTGTGAATCCTGCGGCCTTGCCTC-AGCTCAAGCTCCAAACCCTGTTTT
EY941828       --> GTTGTGAATCCTGCGGCCTTGCCTCCAGCTCAAGCTCCAAACCCTGTATT

               1451   -   1501
UN17709        --> CACAGATGCTGATGTCACTGAGCCACCACTACCTCCGGTTACAGCAAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727798       <-- CACAGATGCTGATGTCACTGAGCCACCACTACCTCCGGTTACAGCAAAAG
FD544899       <-- CACAGATGCTGATGTCACTGAGCCACCACTACCTCCGGTTACAGCAAAAG
FD566954       <-- CACAGATGCCGATGTCACTGAGCCACCACTACCTCCGGTTACAGCAAAAT
FD575013       <-- CACAGATGCTGATGTCACTGAGCCACCACTACCTCCGGTTACAGCAAAAG
EY937326       <-- CACAGATGCTGATGTCACTGAGCCACCACTACCTCCGGTTACAGCAAAAG
FD960776       <-- CACAGATGCCGATGTCACTGAGCCACCACTACCTCCGGTTACAGCAAAAT
EY911269       <-- CACAGATGCTGATGTCACTGAGCCACCACTACCTCCGGTTACAGCAAAAG
EY915419       --> ..................................................
FD964892       --> ..................................................
FD571133       --> ..................................................
FD548756       --> ..................................................
FD964216       --> CACAGATGCCGATGTCACTGAGTCACCACTACCTCCGGTTACA.......
EY941828       --> CACAGATGCTGATGTCACTGAGCCACCACTACCTCCGGTTACAGCAAAAG

               1501   -   1551
UN17709        --> CCCCAACCGCAACTCCTGGAACACCATCAACCACTGCACCGCCACCTAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727798       <-- CCCCAACCGCAACTCCTGGAACACCATCAACCACTGCACCGCCACCTAGT
FD544899       <-- CCCCAACCGCAACTCCTGGAACACCATCAACCACTGCACCGCCACCTAGT
FD566954       <-- CCCCAACCGCAAGTCCTGGAACACCATCAACCACTGCACCGCCACCTAGT
FD575013       <-- CCCCAACCGCAACTCCTGGAACACCATCAACCACTGCACCGCCACCTAGT
EY937326       <-- CCCCAACCGCAACTCCTGGAACACCATCAACCACTGCACCGCCACCTAGT
FD960776       <-- CCCCAACCGCAAGTCCTGGAACACCATCAACCACTGCACCGCCACCTAGT
EY911269       <-- CCCCAACCGCAACTCCTGGAACACCATCAACCACTGCACCACCACCTAGT
EY915419       --> ..................................................
FD964892       --> ..................................................
FD571133       --> ..................................................
FD548756       --> ..................................................
FD964216       --> ..................................................
EY941828       --> CCCCAACCGCAACTCCTGGAACACCATCAACCACTGCACCGCCACCTAGT

               1551   -   1601
UN17709        --> GGACAAACCAGACTCGCTCTATCTCTTCTCCTTTCTGTTTTTGCAATGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727798       <-- GGACAAACCAGACTCGCTCTATCTCTTCTCCTTTCTGTTTTTGCAATGGT
FD544899       <-- GGACAAACCAGACTCGCTCTATCTCTT-TCCTCTCTGTTTTTGCAATGGT
FD566954       <-- GGACAAACCAGACTCGCTCTATCTCTTCTCCTTTCTGTTTTTGCAATGGT
FD575013       <-- GGACAAACCAGACTCGCTCTATCTCTTCTCCTTTCTGTTTTTGCAATGGT
EY937326       <-- GGACAAACCAGACTCGCTCTATCTCTTCTCCTTTCTGTTTTTGCAATGGT
FD960776       <-- GGACAAACCAGCCTCGCTCTATCTCTTCTCCTTTCTGTTTTTGCAATGGT
EY911269       <-- GGACAAACCAGACTCGCTCTATTTTTTTTCCTCTCTGTTTTTGCTATGGT
EY915419       --> ..................................................
FD964892       --> ..................................................
FD571133       --> ..................................................
FD548756       --> ..................................................
FD964216       --> ..................................................
EY941828       --> GGACAAACCAGACTCGCTCTATCTCTTCTCCTTTCTGTTTTTGCAATGGT

               1601   -   1651
UN17709        --> TTTTGCCTCTCTTCTACTTATGTGATCACATCTTCTCGCTGTTGATAATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727798       <-- TTTTGCCTCTCTTCTACTTATGTGATCACATCTTCTCGCTGTTGATAATG
FD544899       <-- TTTTGCCTCTCTTCTACTTATGTGATCACATCTTCTCGCTGTTGATAATG
FD566954       <-- TTTTGCCTCTCTTCTACTTATGTGATCACATCTTCTCGCTGTTGATAATG
FD575013       <-- TTTTGCCTCTCTTCTACTTATGTGATCACATCTTCTCGCTGTTGATAATG
EY937326       <-- TTTTGCCTCTCTTCTACTTATGTGATCACATCTTCTCGCTGTTGATAATG
FD960776       <-- TTTTGCCTCTCTTCTACTTATGTGATCACATCTTCTCGCTGTTGATAATG
EY911269       <-- TTTTGCCTCTTTTCTACTTATGTGATCACATCTTCTCGCTGTTGATAATG
EY915419       --> ..................................................
FD964892       --> ..................................................
FD571133       --> ..................................................
FD548756       --> ..................................................
FD964216       --> ..................................................
EY941828       --> TTTTGCCTCTCTTCTACTTATGTGATCACATCTTCTCGCTGTTGATAATG

               1651   -   1701
UN17709        --> TCTTTTCCTGGGCGTGACTCAGTCAATATCTTAACAGCCGGAACCGTAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727798       <-- TCTTTTCCTGGGCGTGACTCAGGCAATATCTTAACAGCCGGAACCGTAAA
FD544899       <-- TCTTTTCCTGGGCGTGACTCAGTCAATATCTTAACAGCCGGAACCGTAAA
FD566954       <-- TCTTTTCCTGGGCGTGCCTCAGTCAAAATCTTAACAGCCGGAACCGTAAA
FD575013       <-- TCTTTTCCTGGGCGTGACTCAGTCAATATCTTAACAGCCGGAACCGTAAA
EY937326       <-- TCTTTTCCTGGGCGTGACTCAGTCAATATCTTAACAGCCGGAACCGTAAA
FD960776       <-- TCTTTTCCTGGGCGTGCCTCAGTCAAAATCTTAACAGCCGGAACCGTAAA
EY911269       <-- TCTTTTCCTGGGCGTGACTCAGTCAATATCTTAACAGCCGGAACCGTAAA
EY915419       --> ..................................................
FD964892       --> ..................................................
FD571133       --> ..................................................
FD548756       --> ..................................................
FD964216       --> ..................................................
EY941828       --> TCTTTTCCTGGGCGTGACTCAGTCAATATCTTAACAGCCGGAACCGTAAA

               1701   -   1751
UN17709        --> TTCTTTT-CCTGTTTATATTCTTAGTTCTGTCCAAAAGAACAGGAGATTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727798       <-- TTCTTTT-CCTGTTTATATTCTTAGTTCTGTCCAAAAGAACAGGAGATTC
FD544899       <-- TTCTTTT-CCTGTTTATATTCTTAGTTCTGTCCAAAAGAACAGGAGATTC
FD566954       <-- TTCTTTTTCCTGTTTATATTCTTAGTTCTGTCCAAAAGAACAGGAGATTC
FD575013       <-- TTCTTTT-CCTGTTTATATTCTTAGTTCTGTCCAAAAGAACAGGAGATTC
EY937326       <-- TTCTTTT-CCTGTTTATATTCTTAGTTCTGTCCAAAAGAACAGGAGATTC
FD960776       <-- TTCTTTTTCCTGTTTATATTCTTAGTTCTGTCCAAAAGAACAGGAGATTC
EY911269       <-- TTCTTTT-CCTGTTTATATTTTTAGTTCTGTCCAAAAGAACAGGAGATTC
EY915419       --> ..................................................
FD964892       --> ..................................................
FD571133       --> ..................................................
FD548756       --> ..................................................
FD964216       --> ..................................................
EY941828       --> TTCTTTT-CCTGTTTATATTCTTAGTTCTGTCCAAA-G-ACA-GAGATTC

               1751   -   1801
UN17709        --> TTGGAGTGTTGTAACTTTTCCGCATATTCATTTGTTGTTGTAACATAATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727798       <-- TTGGAGTGTTGTAACTTTTCCGCATATTCATTTGTTGTTGTAACATAATA
FD544899       <-- TTGGAGTGTTGTAACTTTTCCGCATATTCATTTGTTGTTGT.........
FD566954       <-- TTGGAGTGTTGTAACTTTTCCGCATATTCATTTGTTGTTGTAACATAATA
FD575013       <-- TTGGAGTGTTGTAACTTTTCTGCATATTCATTTGTTGTTGTAACATAATA
EY937326       <-- TTGGAGTGTTGTAACTTTTCCGCATATTCATTTGTTGTTGTAACATAATA
FD960776       <-- TTGGAGTGTTGTAACTTTTCCGCATATTCATTTGTTGTTGTAACATAATA
EY911269       <-- TTGGAGTGTTGTAACTTTTCCGCATATTCATTTGTTGTTGTAACATAATA
EY915419       --> ..................................................
FD964892       --> ..................................................
FD571133       --> ..................................................
FD548756       --> ..................................................
FD964216       --> ..................................................
EY941828       --> TTGGAGTGTTGTA-C-TTTCCGCATATTCATTTGTTGT-GT-ACAT-ATA

               1801   -   1851
UN17709        --> CTCTTGCATTGTGTCTTGTACTATTTATGAGATTGTATCTATTCTTAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727798       <-- CTCTTGCATTGTGTCTTGTACTATTTATGAGATTGTATCTATTCgt....
FD544899       <-- ..................................................
FD566954       <-- CTCTTGCATTGTGTATTGTACTATTTATGAGATaaagacgtagtaatc..
FD575013       <-- CTCTTTCATTGTGTCTTGTACTATTTATGAGATTGTATCTATTCcc....
EY937326       <-- CTCTTGCATTGTGTCTTGTACTATTTATGAGATTGTATCTATTCTTAAAG
FD960776       <-- CTCTTGCATTGTGTATTGTACTATTTATGAGATaaagacgtagtaact..
EY911269       <-- CTCTTGCATTGTGTCTTGTACTATTTATGAGATTGTATCTATTCTT....
EY915419       --> ..................................................
FD964892       --> ..................................................
FD571133       --> ..................................................
FD548756       --> ..................................................
FD964216       --> ..................................................
EY941828       --> CTCTTGCAT-GTGTCT-GTACTA...........................

               1851   -   1901
UN17709        --> ACGTAGTAATCAATTTCGTATTCCACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727798       <-- ...........................
FD544899       <-- ...........................
FD566954       <-- ...........................
FD575013       <-- ...........................
EY937326       <-- ACGTAGTAATCAATTTCGTATTCCACT
FD960776       <-- ...........................
EY911269       <-- ...........................
EY915419       --> ...........................
FD964892       --> ...........................
FD571133       --> ...........................
FD548756       --> ...........................
FD964216       --> ...........................
EY941828       --> ...........................