1      -     51
UN17711        --> AGGATAAGCAATCATCTCATTAGCTTCACGAACTACAT--CTAATGGTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY915912       <-- ..................................................
EV529009       <-- ..................................................
FD535280       <-- ..................................................
FY433908       <-- ..................................................
FY438841       <-- ..................................................
EY915215       <-- ..................................................
EY948006       <-- ..................................................
FD576654       <-- ..................................................
FD938175       <-- ..................................................
EW734007       <-- ..................................................
FD568646       <-- ..................................................
FD580032       <-- ..................................................
EV547864       <-- ..................................................
EX897303       <-- ..................................................
EV531326       --> AGGATAAGCAATCATCTCATTAGCTTCACGAACTACAT--CTAATGGTGA
FD572956       --> .....................gGCTTCACGAACTACATATCTAATGGTGA
FD581106       --> ................................................gc
FD934618       --> ................................................gg
EV532857       --> ..................................................
FD529852       --> ..................................................
FD530973       --> ..................................................
EY911106       --> ..................................................
EX901088       --> ..................................................
EW739210       --> ..................................................
EY943793       --> ..................................................

               51     -    101
UN17711        --> AACAAATCAAAAGCCCCTTGTACCACAATCATAATCAACATTCACATAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY915912       <-- ttttctcttttAGCCCCTTGTACCACAATCATAATCAACATTCACATAAA
EV529009       <-- ..................................................
FD535280       <-- ..................................................
FY433908       <-- ..................................................
FY438841       <-- ..................................................
EY915215       <-- ..................................................
EY948006       <-- ..................................................
FD576654       <-- ..................................................
FD938175       <-- ..................................................
EW734007       <-- ..................................................
FD568646       <-- ..................................................
FD580032       <-- ..................................................
EV547864       <-- ..................................................
EX897303       <-- ..................................................
EV531326       --> AACAAATCAAAAGCCCCTTGTACCACAATCATAATCAACATTCACATAAA
FD572956       --> AACAAATCAAAAGCCC-TTGTACCACAATCATAATCAACATTCACATAAA
FD581106       --> AACAAATCAAAAGCCC-TTGTACCACAATCATAATCAACATTCACATAAA
FD934618       --> AACAAATCAAAAGCCC-TTGTACCACAATCATAATCAACATTCACATAAA
EV532857       --> .......CAAAAGCCCCTTGTACCACAATCATAATCAACATTCACATAAA
FD529852       --> .......CAAAAGCCCCTTGTACCACAATCATAATCAACATTCACATAAA
FD530973       --> .......CAAAAGCCCCTTGTACCACAATCATAATCAACATTCACATAAA
EY911106       --> ...................GTACCACAATCATAATCAACATTCACATAAA
EX901088       --> .....................gCCACAATCATAATCAACATTCACATAAA
EW739210       --> .....................gaCACAATCATAATCAACATTCACATAAA
EY943793       --> ..........................................gACATAAA

               101    -    151
UN17711        --> CATCATTCTCCTGATTCACTCACCAGTCCAATGCATGTAATTATAACGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY915912       <-- CATCATTCTCCTGATTCACTC-----ACCAATGCATGTAATTATAACGCT
EV529009       <-- ...........................................TAACGCT
FD535280       <-- ..................................................
FY433908       <-- ..................................................
FY438841       <-- ..................................................
EY915215       <-- ..................................................
EY948006       <-- ..................................................
FD576654       <-- ..................................................
FD938175       <-- ..................................................
EW734007       <-- ..................................................
FD568646       <-- ..................................................
FD580032       <-- ..................................................
EV547864       <-- ..................................................
EX897303       <-- ..................................................
EV531326       --> CATCATTCTCCTGATTCACTCACCAGTCCAATGCATGTAATTATAACGCT
FD572956       --> CATCATTCTCCTGATTCACTCACCAGTCCAATGCATGTAATTATAACGCT
FD581106       --> CATCATTCTCCTGATTCACTCACCAGTCCAATGCATGTAATTATAACGCT
FD934618       --> --TCATTCTCCTGATTCACTCACCAGTCCAATGCATGTAATTATAACGCT
EV532857       --> CATCATTCTCCTGATTCACTCACCAGTCCAATGCATGTAATTATAACGCT
FD529852       --> CATCATTCTCCTGATTCACTCACCAGTCCAATGCGTGTAATTATAACGCT
FD530973       --> CATCATTCTCCTGATTCACTCACCAGTCCAATGCATGTAATTATAACGCT
EY911106       --> CATCATTCTCCTGATTCACTCACCAGTCCAATGCATGTAATTATAACGCT
EX901088       --> CATCATTCTCCTGATTCACTCACCAGTACAATGCATGTAATTATAACGCT
EW739210       --> CATCATTCTCCTGATTCACTCACCAGTCCAATGCACGTAATTATAACGCT
EY943793       --> CATCATTCTTCTGATTCACTCACCAGTCCAATGCACTTAATTGTAACGCT

               151    -    201
UN17711        --> ACTATTGACCCTAA-CTACCACTCAAACATAGAGTTTTTGCACCAAATCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY915912       <-- ACTATTGACCCTAA-CTACCACTCAAACATAGAGTTTTTGCACCAAATCT
EV529009       <-- ACTATTGACCCTAA-CTACCACTCAAACATAGAGTTTTTGCACCAAATCT
FD535280       <-- ..................................................
FY433908       <-- ..................................................
FY438841       <-- ..................................................
EY915215       <-- ..................................................
EY948006       <-- ..................................................
FD576654       <-- ..................................................
FD938175       <-- ..................................................
EW734007       <-- ..................................................
FD568646       <-- ..................................................
FD580032       <-- ..................................................
EV547864       <-- ..................................................
EX897303       <-- ..................................................
EV531326       --> ACTATTGACCCTAA-CTACCACTCAAACATAGAGTTTTTGCACCAAATCT
FD572956       --> ACTATTGACCCTAA-CTACCACTCAAACATAGAGTTTTTGCACCAGATCT
FD581106       --> ACTATTGACCCTAA-CTACCACTCAAACATAGAGTTTTTGCACCAAATCT
FD934618       --> ACTATTGACCCTAA-CTACCACTCAAACATAGAGTTTTTGCACCAAATCT
EV532857       --> ACTATTGACCCTAA-CTACCACTCAAACATAGAGTTTTTGCACCAAATCT
FD529852       --> ACTATTGACCCTAA-CTACCACTCAAACATAGAGTTTTTGTACCAAATCT
FD530973       --> ACTATTGACCCTAA-CTACCACTCAAACATAGAGTTTTTGCACCAAATCT
EY911106       --> ACTACTGACCCTAA-CTACCACTCAAACATAGAGTTTTTGCACCAAATCT
EX901088       --> ACTATTGACCCTAA-CTACCACTCAAACATAGAGTTTTTGCACCAAATCT
EW739210       --> ACTATTGACCCTAA-CTACCACTCAAACATAGAGTTTTTGCACCAAATCT
EY943793       --> ACTATTGACCCTAAACTACCACTCAAACAGAGAGTTTTTGCACCAAATCT

               201    -    251
UN17711        --> CAAATACTTATCAACAACGAAACATAGGAACCTGAAATTT-CACCCAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY915912       <-- CAAATACTTATCAACAACGAAACATAGGAACCTGAAATTT-CACCCAGAA
EV529009       <-- CAAATACTTATCAACAACGAAACATAGGAACGTGAAATTT-CACCCAGAA
FD535280       <-- ...................................AATTT-CACCCAGAA
FY433908       <-- ..................................................
FY438841       <-- ..................................................
EY915215       <-- ..................................................
EY948006       <-- ..................................................
FD576654       <-- ..................................................
FD938175       <-- ..................................................
EW734007       <-- ..................................................
FD568646       <-- ..................................................
FD580032       <-- ..................................................
EV547864       <-- ..................................................
EX897303       <-- ..................................................
EV531326       --> CAAATACTTATCAACAACGAAACATAGGAACCTGAAATTT-CACCCAGAA
FD572956       --> CAAATACTTATCAACAACGAAACATAGGAACCTGAAATTT-CACCCAGAA
FD581106       --> CAAATACTTATCAACAACGAAACATAGGAACCTGAAATTT-CACCCAGAA
FD934618       --> CAAATACTTATCAACAACGAAACATAGGAACCTGAAATTT-CACCCAGAA
EV532857       --> CAAATACTTATCAACAACGAAACATAGGAACCTGAAATTT-CACCCAGAA
FD529852       --> CAAATACTTATCAACAACGAAACATAGGAACCTGAAATTT-CACCCAGAA
FD530973       --> CAAATACTTATCAACAACGAAACATAGGAACCTGAAATTT-CACCCAGAA
EY911106       --> CAAATACTTATCAACAACGAAACATAGGAACCTGAAATTT-CACCCAGAA
EX901088       --> CAAATACTTATCAACAACGAAACATAGGAACCTGAAATTT-CACCCAGAA
EW739210       --> CAAATACTTATCAACAACGAAACACAGGAACCTGAAATTT-CACCCAGAA
EY943793       --> CAAATACTTATCAACAACGAAACATAGGAACCTGAAATTTTCACCCAGAA

               251    -    301
UN17711        --> CACATCTAAA--CCA------CAGACTGATTCTCCAAGAAATGCAAGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY915912       <-- CACATCTAAA--CCA------CAGACTGATTCTCCAAGAAATGCAAGAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV529009       <-- CACATCTAAA--CCA------CAGACTGATTCTCCAAGAAATGCAAGAGA  Raphanus raphanistrum subsp. maritimus
FD535280       <-- CACATCTAAA--CCA------CAGACTGATTCTCCAAGAAATGCAAGAGA  Raphanus raphanistrum subsp. maritimus
FY433908       <-- ..................................................  Raphanus sativus cv GSK3-1
FY438841       <-- ..................................................  Raphanus sativus cv GSK3-1
EY915215       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY948006       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD576654       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD938175       <-- ..................................................  Raphanus sativus var. oleiformis
EW734007       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD568646       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD580032       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV547864       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX897303       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV531326       --> CACATCTAAA--CCA------CAGACTGATTCTCCAAGAAATGCAAGAGA  Raphanus raphanistrum subsp. maritimus
FD572956       --> CACATCTAAA--CCA------CAGACTGATTCTCCAAGAAGTGCAAGAAA  Raphanus sativus cv Early Scarlet Globe
FD581106       --> CACATCTAAA--CCA------CAGACTGATTCTCCAAGAAGTGCAAGAGA  Raphanus sativus cv Rat-Tail Radish #3870
FD934618       --> CACATCTAAA--CCA------CAGACTGATTCTCCAAGAAGTGCAAGAAA  Raphanus sativus var. oleiformis
EV532857       --> CACATCTAAA--CCA------CAGACTGATTCTCCAAGAAATGCAAGAGA  Raphanus raphanistrum subsp. maritimus
FD529852       --> CACATCTAAA--CCA------CAGACTGATTCTCCAAGAAATGCAAGAGA  Raphanus raphanistrum subsp. maritimus
FD530973       --> CACATCTAAA--CCA------CAGACTGATTCTCCAAGAAATGCAAGAGA  Raphanus raphanistrum subsp. maritimus
EY911106       --> CACATCTAAA--CCA------CAGACTGATTCTCCAAGAAATGCAAGAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX901088       --> CACATCTAAA--CCA------CAGACTGATTCTCCAAGAAGTGCAAGAGA  Raphanus sativus cv Early Scarlet Globe
EW739210       --> CACATCTAAA--CCA------CAGACTGATTCTCCAAGAAATGCAAGAGA  Raphanus sativus cv Rat-Tail Radish #3870
EY943793       --> CACATCTAAAACCCAGAGAACCAGACTGATTCTCCAAGAAATGCAAGAGA  Raphanus sativus cv Rat-Tail Radish #3870

               301    -    351
UN17711        --> GATAGATAAACTAGTTAAAAGACCCTACATGAAGCTGAACTTTAGGACAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY915912       <-- GATAGATAAACTAGTTAAAAGACCCTACATGAAGCTGAACTTTAGGACAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV529009       <-- GATAGATAAACTAGTTAAAAGACCCTACATGAAGTTGAACTTTAGGACAT  Raphanus raphanistrum subsp. maritimus
FD535280       <-- GATAGATAAACTAGTTAAAAGACCCTACATGAAGTTGAACTTTAGGACAT  Raphanus raphanistrum subsp. maritimus
FY433908       <-- ..................................CTGAACTTTAGGACAT  Raphanus sativus cv GSK3-1
FY438841       <-- ..................................................  Raphanus sativus cv GSK3-1
EY915215       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY948006       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD576654       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD938175       <-- ..................................................  Raphanus sativus var. oleiformis
EW734007       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD568646       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD580032       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV547864       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX897303       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV531326       --> GATAGATAAACTAGTTAAAAGACCCTACATGGAGCTGAACTTTAGGACAT  Raphanus raphanistrum subsp. maritimus
FD572956       --> GATAGATAAACTAGTTAAAAGACCCTACATGAAACTGAACTTTAGGACAT  Raphanus sativus cv Early Scarlet Globe
FD581106       --> GATAGATAAACTAGTTAAAAGACCCTACATGAAACTGAACTTTAGGACAT  Raphanus sativus cv Rat-Tail Radish #3870
FD934618       --> GATAGATAAACTAGTTAAAAGACCCTACATGAAACTGAACTTTAGGACAT  Raphanus sativus var. oleiformis
EV532857       --> GATAGATAAACTAGTTAAAAGACCCTACATGAAGTTGAACTTTAGGACAT  Raphanus raphanistrum subsp. maritimus
FD529852       --> GATAGATAAACTAGTTAAAAGACCCTACATGAAGCTGAACTTTAGGACAT  Raphanus raphanistrum subsp. maritimus
FD530973       --> GATAGATAAACTAGTTAAAAGACCCTACATGAAGTTGAACTTTAGGACAT  Raphanus raphanistrum subsp. maritimus
EY911106       --> GATAGATAAACTAGTTAAAAGACCCTACATGAAACTGAACTTTAGGACAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX901088       --> GATAGATAAACTAGTTAAAAGACCCTACATGAAACTGAACTTTAGGACAT  Raphanus sativus cv Early Scarlet Globe
EW739210       --> GATAGATAAACTAGTTAAAAGACCCTACATGAAACTGAACTTTAGGACAT  Raphanus sativus cv Rat-Tail Radish #3870
EY943793       --> GATAGATAAACTAGTTAAAAGACCCTAAATGAAGCTGAACTTTAGGACAT  Raphanus sativus cv Rat-Tail Radish #3870

               351    -    401
UN17711        --> CAGATAGCTTTTTTTGTAGTGTGTCAAACGTACTGATTGACGCGGAAGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY915912       <-- CAGATAGCTTTTTTTGTAGTGTGTCAAACGTACTGATTGACGCGGAAGGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV529009       <-- CAGATAGCTTTTTTTGTAGTGTGTCAAACGTACTGATTGACGCGGAAGGC  Raphanus raphanistrum subsp. maritimus
FD535280       <-- CAGATAGCTTTTTTTGTAGTGTGTCAAACGTACTGATTGACGCGGAAGGC  Raphanus raphanistrum subsp. maritimus
FY433908       <-- CAGATAGCTTTTTTTGTAGTGTGTCAAACGTACTGATTGACGCGGAAGGC  Raphanus sativus cv GSK3-1
FY438841       <-- ..............................................AGGC  Raphanus sativus cv GSK3-1
EY915215       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY948006       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD576654       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD938175       <-- ..................................................  Raphanus sativus var. oleiformis
EW734007       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD568646       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD580032       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV547864       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX897303       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV531326       --> CAGATAGCTTTTTTTGTAGTGTGTCAAACGTACTGATTGACGCGGAAGGC  Raphanus raphanistrum subsp. maritimus
FD572956       --> CAGATAGCTTTTTT-GTAGTGTTTCAAACGTACTGATTGACGCGGAAGGC  Raphanus sativus cv Early Scarlet Globe
FD581106       --> CAGATAGCTTTTTT-GTAGTGTTTCAAACGTGCTGATTGACGCGGAAGGC  Raphanus sativus cv Rat-Tail Radish #3870
FD934618       --> CAGATAGCTTTTTT-GTAGTGTTTCAAACGTACTGATTGACGCGGAAGGC  Raphanus sativus var. oleiformis
EV532857       --> CAGATAGCTTTTTTTGTAGTGTGTCAAACGTACTGATTGACGCGGAAGGC  Raphanus raphanistrum subsp. maritimus
FD529852       --> CAGATAGCTTTTTTTGTAGTGTGTCAAACGTACTGATTGACGCGGAAGGC  Raphanus raphanistrum subsp. maritimus
FD530973       --> CAGATAGCTTTTTTTGTAGTGTGTCAAACGTACTGATTGACGCGGAAGGC  Raphanus raphanistrum subsp. maritimus
EY911106       --> CAGATAGCTTTTTT-GTAGTGTTTCAAACGTACTGATTGACGCGGAAGGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX901088       --> CAGATAGCTTTTTT-GTAGTGTTTCAAACGTACTGATTGACGAGGAAGGC  Raphanus sativus cv Early Scarlet Globe
EW739210       --> CAGATAGCTTTTTT-GTAGTGTTTCAAACGTACTGATTGACGCGGAAGGC  Raphanus sativus cv Rat-Tail Radish #3870
EY943793       --> CAGATAGCTTTTTTTGTAGTGTGTCAAACGTACTGATTGACGCGGAAGGC  Raphanus sativus cv Rat-Tail Radish #3870

               401    -    451
UN17711        --> AGTGACTTTCAGAACGAAATCTCGAGTTTTGAGTAGCTCAAACACACAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY915912       <-- AGTGACTTTTAGAACGAAATCTCGAGTTTTGAGTAGCTCAAACACACAAA
EV529009       <-- AGTGACTTTCAGAACGAAATCTCGAGTTTTGAGTAGCTCAAACACACAAA
FD535280       <-- AGTGACTTTCAGAACGAAATCTCGAGTTTTGAGTAGCTCAAACACACAAA
FY433908       <-- AGTGACTTTCAGAATGAAATCTCGAGTTTTGAGTAGCTCAAACACACAAA
FY438841       <-- AGTGACTTTCAGAATGAATTCTCGAGTTTTGAGTAGCTCAAACACACAAA
EY915215       <-- ..................................................
EY948006       <-- ..................................................
FD576654       <-- ..................................................
FD938175       <-- ..................................................
EW734007       <-- ..................................................
FD568646       <-- ..................................................
FD580032       <-- ..................................................
EV547864       <-- ..................................................
EX897303       <-- ..................................................
EV531326       --> AGTGACTTTCAGAACGAAATCTCGAGTTTTGAGTAGCTCAAACACACAAA
FD572956       --> AGTGACTTTCAGAACGAAATCTCGAGTTTTGAGTAGCTCAAACACACAAA
FD581106       --> AGTGACTTTCAGAACGAAATCTCGAGTTTTGAGTAGCTCAAACACACAAA
FD934618       --> AGTGACTTTCAAAACGAAATCTCGAGTTTTGAGTAGCTCAAACACACAAA
EV532857       --> AGTGACTTTCAAAACGAAATCTCGAGTTTTGAGTAGCTCAAACACACAAA
FD529852       --> AGTGACTTCCAGAACGAAATCTCGAGTTTTGAGTAGCTCAAACACACAAA
FD530973       --> AGTGACTTTCAAAACGAAATCTCGAGTTTTGAGTAGCTCAAACACACAAA
EY911106       --> AGTGACTTTCAGAACGAAATCTCGAGTTTTGAGTAGCTCAAACAAACAAA
EX901088       --> AGTGACTTTCAGAACGAAATCTCGAGTTTTGAGTAGCTCAAACACACAAA
EW739210       --> AGTGACTTTCAGAACGAAATCTCGAGTTTTGAGTAGCTCAAACACACAAA
EY943793       --> AGTGACTTTCAGAATGAAATCTCGAGTTTTGAGTAGCTCAAACACACAAA

               451    -    501
UN17711        --> CATCTCCTTCCCCTATATTGTTCTCGAGTGTGAACTCATACCATCCTTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY915912       <-- CATCTCCTTCCCCTATATTGTTCTCGAGTGTGAACTCATACCATCCTTGG
EV529009       <-- CATCTCCTTCCCCTATATTGTTCTCGAGTGTGAACTCATACCATCCTTGG
FD535280       <-- CATCTCCTTCCCCTATATTGTTCTCGAGTGTGAACTCATACCATCCTTGG
FY433908       <-- CATCTCCTTCCCCTATATTGTTCTCGAGTGTGAACTCATACCATCCTTGG
FY438841       <-- CATCTCCTTCCCCTATATTGTTCTCGAGTGTGAACTCATACCATCCTTGG
EY915215       <-- ..................................................
EY948006       <-- ..................................................
FD576654       <-- ..................................................
FD938175       <-- ..................................................
EW734007       <-- ..................................................
FD568646       <-- ..................................................
FD580032       <-- ..................................................
EV547864       <-- ..................................................
EX897303       <-- ..................................................
EV531326       --> CATCTCCTTCCCCTATATTGTTCTCGAGTGTGAACTCATACCATCCTTGG
FD572956       --> CATCTCCTTCCCCTATATTGTTCTCGAGTGTGAACTCATACCATCCTTGG
FD581106       --> CATCTCCTTCCCCTATATTGTTCTCGAGTGTGAACTCATACCATCCTTGG
FD934618       --> CATCTCCTTCCCCTATATTGTTCTCGAGTGTGAACTCATACCATCCTTGG
EV532857       --> CATCTCCTTCCCCTATATTGTTCTCGAGTGTGAACTCATACCATCCTTGG
FD529852       --> CATCTCCTTCCCCTATATTGTTCTCGAGTGTGAACTCATACCATCCTTGG
FD530973       --> CATCTCCTTCCCCTATATTGTTCTCGAGTGTGAACTCATACCATCCTTGG
EY911106       --> CATCTCCTTCCCCTATATTGTTCTCGAGTGTGAACTCATACCATCCTTGG
EX901088       --> CATCTCCTTCCCCTATATTGTTCTCGAGTGTGAACTCATACCATCCTTGG
EW739210       --> CATCTCCTTCCCCTATATTGTTCTCGAGTGTGAACTCATACCATCCTTGG
EY943793       --> CATCTCCTTCCCCTATATTGTTCTCGAGTGTGAACTCATACCATCCTTGG

               501    -    551
UN17711        --> CTAAACTTAGCTCTCCCTGCTTTGTAAAGGCACCTCACTGGCCATTGTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY915912       <-- CTc...............................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV529009       <-- CTAAACTTAGCCCTCCCTGCTTTGTAAAGGCACCTCACTGGCCATTGTTT  Raphanus raphanistrum subsp. maritimus
FD535280       <-- CTAAACTTAGCCCTCCCTGCTTTGTAAAGGCACCTCACTGGCCATTGTTT  Raphanus raphanistrum subsp. maritimus
FY433908       <-- CTAAACTTAGCTCTCCCTGCTTTGTAAAGGCACCTCACTGGCCATTGTTT  Raphanus sativus cv GSK3-1
FY438841       <-- CTAAACTTAGCTCTCCCTGCTTTGTAAAGGCACCTCACTGGCCATTGTTT  Raphanus sativus cv GSK3-1
EY915215       <-- ...........gCTCTCTGCTT-GTAAAG-CA-CTCACTGGCCAT-G-TT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY948006       <-- ....................TTTGTAAAGGCAC-TCACTGGCCATTGTTT  Raphanus sativus cv Rat-Tail Radish #3870
FD576654       <-- ........................TAAAGGCACCTCACTGGCCATTGTTT  Raphanus sativus cv Rat-Tail Radish #3870
FD938175       <-- .............................................ttTTT  Raphanus sativus var. oleiformis
EW734007       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD568646       <-- ................................aagcactcactgccatgt  Raphanus sativus cv Early Scarlet Globe
FD580032       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV547864       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX897303       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV531326       --> CTAAACTTAGCCCTCCCTGCTTTGTAAAGGCACCTCACTGGCCATTGTTT  Raphanus raphanistrum subsp. maritimus
FD572956       --> CTAAACTTAGCTCTCCCTGCTTTGTAAAGGCACCTCACTGGCCATTGTTT  Raphanus sativus cv Early Scarlet Globe
FD581106       --> CTAAACTTAGCTCTCCCTGCTTTGTAAAGGCACCTCACTGGCCATTGTTT  Raphanus sativus cv Rat-Tail Radish #3870
FD934618       --> CTAAACTTAGCTCTCCCTGCTTTGTAAAGGCACCTCACTGGCCATTGTTT  Raphanus sativus var. oleiformis
EV532857       --> CTAAACTTAGCCCTCCCTGCTTTGTAAAGGCACCTCACTGGCCATTGTTT  Raphanus raphanistrum subsp. maritimus
FD529852       --> CTAAACTTAGCCCTCCCTGCTTTGTAAAGGCACCTCACTGGCCATTGTTT  Raphanus raphanistrum subsp. maritimus
FD530973       --> CTAAACTTAGCCCTCCCTGCTTTGTAAAGGCACCTCACTGGCCATTGTTT  Raphanus raphanistrum subsp. maritimus
EY911106       --> CTAAACTTAGCTCTCCCTGCTTTGTAAAGGCACCTCACTGGCCATTGTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX901088       --> CTAAACTTAGCTCTCCCTGCTTTGTAAAGGCACCTCACTGGCCATTGTTT  Raphanus sativus cv Early Scarlet Globe
EW739210       --> CTAAACTTAGCTCTCCCTGCTTTGTAAAGGCACCTCACTGGCCATTGTTT  Raphanus sativus cv Rat-Tail Radish #3870
EY943793       --> CTAAACTTAGCTCTCCCTGCTTTGTAAAGGCACCTCACTGGCCATTGTTT  Raphanus sativus cv Rat-Tail Radish #3870

               551    -    601
UN17711        --> CTCCCCGAGCTGGAGCTTGATGAAACCAGCTATCCC-GGTTAGGTACTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY915912       <-- ..................................................
EV529009       <-- CTCCCCGAGCTGGAGCTTGATGAAACCAGCTATCCC-GGTTAGGTACTTC
FD535280       <-- CTCCCCGAGCTGGAGCTTGATGAAACCAGCTATCCC-GGTTAGGTACTTC
FY433908       <-- CTCCCCGAGCTGGAGCTTGATGAAACCAGCTATCCC-GGTTAGGTACTTC
FY438841       <-- CTCCCCGAGCTGGAGCTTGATGAAACCAGCTATCCC-GGTTAGGTACTTC
EY915215       <-- CTCCCCGAGCTGGAGCTTGATGAAACCAGCTATCCC-GGTTAGGTACT-C
EY948006       <-- CTCCCCGAGCTGGAGCTTGATGAAACCAGCTATCCCCGGTTAGGTACTTC
FD576654       <-- CTCCC-GAGCTGGAGCTTGATGAAACCAGCTATCCC-GGTTAGGTACTTC
FD938175       <-- CTCCCCGAGCTGGAGCTTGATGAA-CCAGCTATCCC-GGTTAGGTACTTC
EW734007       <-- CTCCCCGAGCTGGAGCTTGATGAAACCAGCTATCCC-AGTTAGGTACTTC
FD568646       <-- tctCCCGAGCTG-AGC-TGATGAAACCAGCTATCCC-GGTTAGGTACT-C
FD580032       <-- .....CGAGCTGGAGCTTGATGAAACCAGCTATCCC-GGTTAGGTACTTC
EV547864       <-- ...................ATGAAACCAGCTATCCC-GGTTAGGTACTTC
EX897303       <-- ............................GCTATCCC-GGTTAGGTACTTC
EV531326       --> CTCCCCGAGCTGGAGCTTGATGAAACCAGCTATCCC-GGTTAGGTACTTC
FD572956       --> CTCCCCGAGCTGGAGCTTGATGAAACCAGCTATCCC-GGTTAGGTACTTC
FD581106       --> CTCCCCGAGCTGGAGCTTGATGAAACCAGCTATCCC-GGTTAGGTACTTC
FD934618       --> CTCCCCGAGCTGGAGCTTGATGAAACCAGCTATCCC-GGTTAGGTACTTC
EV532857       --> CTCCCCGAGCTGGAGCTTGATGAAACCAGCTATCCC-GGTTAGGTACTTC
FD529852       --> CTCCCCGAGCTGGAGCTTGATGAAACCAGCTATCCC-GGTTAGGTACTTC
FD530973       --> CTCCCCGAGCTGGAGCTTGATGAAACCAGCTATCCC-GGTTAGGTACTTC
EY911106       --> CTCCCCGAGCTGGAGCTTGATGAAACCAGCTATCCC-GGTTAGGTACTTC
EX901088       --> CTCCCCGAGCTGGAGCTTGATGAAACCAGCTATCCC-GGTTAGGTACTTC
EW739210       --> CTCCCCGAGCTGGAGCTTGATGAAACCAGCTATCCC-AGTTAGGTACTTC
EY943793       --> CTCCCCGAGCTGGAGCTTGATGAAACCAGCTATCCC-GGTTAGGTACTTC

               601    -    651
UN17711        --> TCAGCAAA-CCCAGAAGGCAAGTACATGATGCAGCCTCGGTAGAGATAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY915912       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV529009       <-- TCAGCAAA-CCCAGAAGGCAAGTACATGATGCAGCCTCGGTAGAGATACG  Raphanus raphanistrum subsp. maritimus
FD535280       <-- TCAGCAAA-CCCAGAAGGCAAGTACATGATGCAGCCTCGGTAGAGATACG  Raphanus raphanistrum subsp. maritimus
FY433908       <-- TCAGCAAA-CCCAGAAGGCAAGTACATGATGCAGCCTCGGTAGAGATAAG  Raphanus sativus cv GSK3-1
FY438841       <-- TCAGCAAA-CCCAGAAGGCAAGTACATGATGCAGCCTCGGTAGAGATAAG  Raphanus sativus cv GSK3-1
EY915215       <-- TCAGCAAA-CCCAGAAGGCAAGTACATGATGCAGCCTCTGTACAGATAGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY948006       <-- TCAGCAAA-CCCAGAAGGCAAGTACATGATGCAGCCTCGGTAGAGATAAG  Raphanus sativus cv Rat-Tail Radish #3870
FD576654       <-- TCAGCAAA-CCCAGAAGGCAAGTACATGATGCAGCCTCTGTACAGATAGG  Raphanus sativus cv Rat-Tail Radish #3870
FD938175       <-- TCAGCAAA-CCCAGAAGGCAAGTACATGATGCAGCCTCTGTACAGATAGG  Raphanus sativus var. oleiformis
EW734007       <-- TCAGCAAA-CCCAGAAGGCAAGTACATGATGCAGCCTCTGTACAGATAGG  Raphanus sativus cv Rat-Tail Radish #3870
FD568646       <-- TCAGCAAA-CCCAGAAGGCAAGTACATGATGCAGCCTCTGTACAGATAGG  Raphanus sativus cv Early Scarlet Globe
FD580032       <-- TCAGCAAAACCCAGAAGGCAAGTACATGATGCAGCCTCGGTAGAGATAAG  Raphanus sativus cv Rat-Tail Radish #3870
EV547864       <-- TCAGCAAA-CCCAGAAGGCAAGTACATGATGCAGCCTCGGTAGAGATACG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX897303       <-- TCAGCAAA-CCCAGAAGGCAAGTACATGATGCAGCCTCTGTACAGATAGG  Raphanus sativus cv Early Scarlet Globe
EV531326       --> TCAGCAAA-CCCAGAAGGCAAGTACATGATGCAGTCTCGGTAGAGATACG  Raphanus raphanistrum subsp. maritimus
FD572956       --> T.................................................  Raphanus sativus cv Early Scarlet Globe
FD581106       --> TCAGCAAA-CCCAGAAGGCAAGTACATGATGCAGCCTCTGTACAGATAGG  Raphanus sativus cv Rat-Tail Radish #3870
FD934618       --> TCAGCAAA-CCCAGAAGGCAAGTACATGATGCAGCCTCTGTACAGATAGG  Raphanus sativus var. oleiformis
EV532857       --> TCAGCAAA-CCCAGAAGGCAAGTACATGATGCAGCCTCGGTAGAGATACG  Raphanus raphanistrum subsp. maritimus
FD529852       --> TCAGCAAA-CCCAGAAGGCAAGTACATGATGCAGCCTCGGTAGAGATACG  Raphanus raphanistrum subsp. maritimus
FD530973       --> TCAGCAAA-CCCAGAAGGCAAGTACATGATGCAGCCTCGGTAGAGATACG  Raphanus raphanistrum subsp. maritimus
EY911106       --> TCAGCAAA-CCCAGAAGGCAAGTACATGATGCAGCCTCTGTACAGATAGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX901088       --> TCAGCAAA-CCCAGAAGGCAAGTACATGATGCAGCCTCTGTACAGATAGG  Raphanus sativus cv Early Scarlet Globe
EW739210       --> TCAGCAAA-CCCAGAAGGCAAGTACATGATGCAGCCTCTGTACAGATAGG  Raphanus sativus cv Rat-Tail Radish #3870
EY943793       --> TCAGCAAA-CCCAGAAGGCAAGTACATGATGCAGCCTCGGTAGAGATAAG  Raphanus sativus cv Rat-Tail Radish #3870

               651    -    701
UN17711        --> ATGGTCGCAGAACAACTCTAAAGAACGGATTGGTTGGCTCGTAGGTTTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY915912       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV529009       <-- ATGGTCGCAGAACAACTCTAAAGAACGGATTGGTTGGCTCGTAGGTTTTG  Raphanus raphanistrum subsp. maritimus
FD535280       <-- ATGGTCGCAGAACAACTCTAAAGAACGGATTGGTTGGCTCGTAGGTTTTG  Raphanus raphanistrum subsp. maritimus
FY433908       <-- ATGGTCGCAGAACAACTCTAAAGAAAGGATTGGTTGGCTCGTAGGTTTTG  Raphanus sativus cv GSK3-1
FY438841       <-- ATGGTCGCAGAACAACTCTAAAGAAAGGATTGGTTGGCTCGTAGGTTTTG  Raphanus sativus cv GSK3-1
EY915215       <-- ACGGTCGCAGAACAACTCTAAAGAACGGATTGGTTGGCTCGTAGGTTTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY948006       <-- ATGGTCGCAGAACAACTCTAAAGAAAGGATTGGTTGGCTCGTAGGTTTTG  Raphanus sativus cv Rat-Tail Radish #3870
FD576654       <-- ACGGTCGCAGAACAACTCTAAAGAACGGATTGGTTGGCTCGTAGGTTTTG  Raphanus sativus cv Rat-Tail Radish #3870
FD938175       <-- ACGGTCGCAGAACAACTCTAAAGAACGGATTGGTTGGCTCGTAGGTTTTG  Raphanus sativus var. oleiformis
EW734007       <-- ACGGTCGCAGAACAACTCTAAAGAACGGATTGGTTGGCTCGTAGGTTTTG  Raphanus sativus cv Rat-Tail Radish #3870
FD568646       <-- ACGGTCGCAGAACAACTCTAAAGAACGGATTGGTTGGCTCGTAGGTTT-G  Raphanus sativus cv Early Scarlet Globe
FD580032       <-- ATGGTCGCAGAACAACTCTAAAGAAAGGATTGGTTGGCTCGTAGGTTTTG  Raphanus sativus cv Rat-Tail Radish #3870
EV547864       <-- ATGGTCGCAGAACAACTCTAAAGAACGGATTGGTTGGCTCGTAGGTTTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX897303       <-- ACGGTCGCAGAACAACTCTAAAGAACGGATTGGTTGGCTCGTAGGTTTTG  Raphanus sativus cv Early Scarlet Globe
EV531326       --> ATGGTCGCAGAACAACTCTAAAGAACGGATTGGTTGGCTCGTAAGTTTTG  Raphanus raphanistrum subsp. maritimus
FD572956       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD581106       --> ACGGTCGCAGAACAACTCTAAAGAACGGATTGGTTGGCTCGTAGGTTTTG  Raphanus sativus cv Rat-Tail Radish #3870
FD934618       --> Acgg..............................................  Raphanus sativus var. oleiformis
EV532857       --> ATGGTCGCAGAACAACTCTAAAGAACGGATTGGTTGGCTCGTAGGTTTTG  Raphanus raphanistrum subsp. maritimus
FD529852       --> ATGGTCGCAGAACAACTCTAAAGAACGGATTGGTTGGCTCGTAGGTTTTG  Raphanus raphanistrum subsp. maritimus
FD530973       --> ATGGTCGCAAAACAACTCTAAAGAACGGATTGGTTGGCTCGTAGGTTTTG  Raphanus raphanistrum subsp. maritimus
EY911106       --> ACGGTCGCAGAACAACTCTAAAGAACGGATTGGTTGGCTCGTAGGTTTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX901088       --> ACGGTCGCAGAACAACTCTAAAGAACGGATTGGTTGGCTCGTAAGTTTTG  Raphanus sativus cv Early Scarlet Globe
EW739210       --> ACGGTCGCAGAACAACTCTAAAGAACGGATTGGTTGGCTCGTAGGTTTTG  Raphanus sativus cv Rat-Tail Radish #3870
EY943793       --> ATGGTCGCAGAACAACTCTAAAGAAAGGATTGGTTGGCTCGTAGGTTTTG  Raphanus sativus cv Rat-Tail Radish #3870

               701    -    751
UN17711        --> GCTGCACTGATGGCTCTCTCTCTTTCCTCAGCAGTTACAGTTCTCTTTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY915912       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV529009       <-- GCTGCACTGATGGCTCTCTCTCTTTCCTCAGTAGTTACAGTTCTTTTTCT  Raphanus raphanistrum subsp. maritimus
FD535280       <-- GCTGCACTGATGGCTCTCTCTCTTTCCTCAGTAGTTACAGTTCTTTTTCT  Raphanus raphanistrum subsp. maritimus
FY433908       <-- GCTGCACTGATGGCTCTCTCTCTTTCCTCTGCAGTTACAGTTCTCTTTCT  Raphanus sativus cv GSK3-1
FY438841       <-- GCTGCACTGATGGCTCTCTCTCTTTCCTCTGCAGTTACAGTTCTCTTTCT  Raphanus sativus cv GSK3-1
EY915215       <-- GCTGCACTGATGGCTCTCTCTCTTTCCTCAGCAGTTACAGTTCTCTTTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY948006       <-- GCTGCACTGATGGCTCTCTCTCTTTCCTCTGCAGTTACAGTTCTCTTTCT  Raphanus sativus cv Rat-Tail Radish #3870
FD576654       <-- GCTGCACTGATGGCTCTCTCTCTTTCCTCAGCAGTTACAGTTCTCTTTCT  Raphanus sativus cv Rat-Tail Radish #3870
FD938175       <-- GCTGCACTGATGGCTCTCTCTCTTTCCTCAGCAGTTACAGTTCTCTTTCT  Raphanus sativus var. oleiformis
EW734007       <-- GCTGCACTGATGGCTCTCTCTCTTTCCTCAGCAGTTACAGTTCTCTTTCT  Raphanus sativus cv Rat-Tail Radish #3870
FD568646       <-- GCTGCACTGATGGCTCTCTCTCTTTCCTCAGCAGTTACGGTTCTCTTTCT  Raphanus sativus cv Early Scarlet Globe
FD580032       <-- GCTGCACTGATGGCTCTCTCTCTTTCCTCTGCAGTTACAGTTCTCTTTCT  Raphanus sativus cv Rat-Tail Radish #3870
EV547864       <-- GCTGCACTGATGGCTCTCTCTCTTTCCTCAGTAGTTACAGTTCTTTTTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX897303       <-- GCTGCACTGATGGCTCTCTCTCTTTCCTCAGCAGTTACAGTTCTCTTTCT  Raphanus sativus cv Early Scarlet Globe
EV531326       --> GCTGCACTGATGGCCCTCTCTCTTTCCTCAGTAGTTACAGTTCTTTTTCT  Raphanus raphanistrum subsp. maritimus
FD572956       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD581106       --> GCTGCACTGATGGCTCTCTCTCTTTCCTCAGCAGTTACAGTTCTCTTTCT  Raphanus sativus cv Rat-Tail Radish #3870
FD934618       --> ..................................................  Raphanus sativus var. oleiformis
EV532857       --> GCTGCACTGATGGCTCTCTCTCTTTCCTCAGTAGTTACAGTTCTTTTTCT  Raphanus raphanistrum subsp. maritimus
FD529852       --> GCTGCACTGATGGCTCTCTCTCTTTCCTCAGTAGTTACAGTTCT......  Raphanus raphanistrum subsp. maritimus
FD530973       --> GCTGCACTGATGGCTCTCTCTCTTTCCTCAGTAGTTACAGTTCTTTTTCT  Raphanus raphanistrum subsp. maritimus
EY911106       --> GCTGCACTGATGGCTCTCTCTCTTTCCTCAGCAGTTACAGTTCTCTTTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX901088       --> GCTGCACTGATGGCTCTCTCTCTTTCCT......................  Raphanus sativus cv Early Scarlet Globe
EW739210       --> GCTGCACTGATGGCTCTCTCTCTTTCCTCAGCAGTTACAGTTCTCTTTCT  Raphanus sativus cv Rat-Tail Radish #3870
EY943793       --> GCTGCACTGATGGCTCTCTCTCTTTCCTCTGCAGTTACAGTTCTCTTTCT  Raphanus sativus cv Rat-Tail Radish #3870

               751    -    801
UN17711        --> ATCAGAAGCACTCTTGTAGAACTTTGAGCTGTTCTCCGGAGTCGTCGACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY915912       <-- ..................................................
EV529009       <-- ATCAGAAGCACTCTTGTAGAACTTTGAGCTGTTCTCCGGAGTCGTCGACG
FD535280       <-- ATCAGAAGCACTCTTGTAGAACTTTGAGCTGTTCTCCGGAGTCGTCGACG
FY433908       <-- ATCAGAAGCACTCTTGTAGAACTTTGAGCTGTTCTCCGGAGTCGTCGACG
FY438841       <-- ATCAGAAGCACTCTTGTAGAACTTTGAGCTGTTCTCCGGAGTCGTCGACG
EY915215       <-- ATCAGAAGCACTCTTGTAGAACTTTGAGCTGTTCTCCGGAGTCGTCGACG
EY948006       <-- ATCAGAAGCACTCTTGTAGAACTTTGAGCTGTTCTCCGGAGTCGTCGACG
FD576654       <-- ATCAGAAGCACTCTTGTAGAACTTTGAGCTGTTCTCCGGAGTCGTCGACG
FD938175       <-- ATCAGAAGCACTCTTGTAGAACTTTGAGCTGTTCTCCGGAGTCGTCGACG
EW734007       <-- ATCAGAAGCACTCTTGTAGAACTTTGAGCTGTTCTCCGGAGTCGTCGACG
FD568646       <-- ATCAGAAGCACTCTTGTAGAACTTTGAGCTGTTCTCCGGAGTCGTCGACG
FD580032       <-- ATCAGAAGCACTCTTGTAGAACTTTGAGCTGTTCTCCGGAGTCGTCGACG
EV547864       <-- ATCAGAAGCACTCTTGTAGAACTTTGAGCTGTTCTCCGGAGTCGTCGACG
EX897303       <-- ATCAGAAGCACTCTTGTAGAACTTTGAGCTGTTCTCCGGAGTCGTCGACG
EV531326       --> ATCAGAAGCACTCTTGTAGAACTTTGAGCTGTTCTCCc............
FD572956       --> ..................................................
FD581106       --> ATCAGAAGCACTCTTGTAGAACTTTGAGCTGTTCTCCGGAGTCGTCGACG
FD934618       --> ..................................................
EV532857       --> ATCAGAAGCACTCTTGTAGAACTTTGAGCTGTTCTCCGGAGTCGTCGACG
FD529852       --> ..................................................
FD530973       --> ATCAGAAGCACTCTTGTAGAACTTTGAGCTGTTCTCCGGAGTCGTCGACG
EY911106       --> ATCAGAAGCACTCTTGTAGAACTTTGAGCTGTTCTCCGGAGTCGTCGACG
EX901088       --> ..................................................
EW739210       --> ATCAGAAGCACTCTTGTAGAACTTTGAGCTGTTCTCCGGAGTCGTCGACG
EY943793       --> ATCAGAAGCACTCTTGTAGAACTTTGAGCTGTTCTCCGGAGTCGTCGACG

               801    -    851
UN17711        --> AGCTCATATCCTCGGGATTAGGATTCTTCTTCTTCCTTCCTCTCTTCTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY915912       <-- ..................................................
EV529009       <-- AGCTCATATCCTCGGGATTAGGATTCTTCTTCTTCCTTCCTCTCTTCTTA
FD535280       <-- AGCTCATATCCTCGGGATTAGGATTCTTCTTCTTCCTTCCTCTCTTCTTA
FY433908       <-- AGCTCATATCCTCGGGATTAGGATTCTTCTTCTTCCTTCCTCTCTTCTTA
FY438841       <-- AGCTCATATCCTCGGGATTAGGATTCTTCTTCTTCCTTCCTCTCTTCTTA
EY915215       <-- AGCTCATATCCTCGGGATTAGGATTCTTCTTCTTCATTCCTCTCTTCTTA
EY948006       <-- AGCTCATATCCTCGGGATTAGGATTCTTCTTCTTCCTTCCTCTCTTCTTA
FD576654       <-- AGCTCATATCCTCGGGATTAGGGTTCTTCTTCTTCCTTCCTCTCTTCTTA
FD938175       <-- AGCTCATATCCTCGGGATTAGGATTCTTCTTCTTCCTTCCTCTCTTCTTA
EW734007       <-- AGCTCATATCCTCGGGATTAGGATTCTTCTTCTTCCTTCCTCTCTTCTTA
FD568646       <-- AGCTCATATCCTCGGGATTAGGATTCTTCTTCTTCCTTCCTCTCTTCTTA
FD580032       <-- AGCTCATATCCTCGGGATTAGGATTCTTCTTCTTCCTTCCTCTCTTCTTA
EV547864       <-- AGCTCATATCCTCGGGATTAGGATTCTTCTTCTTCCTTCCTCTATTCTTA
EX897303       <-- AGCTCATATCCTCGGGATTAGGATTCTTCTTCTTCCTTCCTCTCTTCTTA
EV531326       --> ..................................................
FD572956       --> ..................................................
FD581106       --> AGCTCATATCCTCGG...................................
FD934618       --> ..................................................
EV532857       --> AGCTCATATCCTCGGGATTAGGATTCTTCTTCTTCCTTCCTCTCTTC...
FD529852       --> ..................................................
FD530973       --> AGCTCATATCCTCGGGATTAGGATTCTTCTT...................
EY911106       --> AGCTCATATCCTCGGGATTAGGATTCTTCTTCTTCATTCCTCTCTTCTTA
EX901088       --> ..................................................
EW739210       --> AGCTCATATCCTCGGGATTAGGATTCTTCTTCTTCCTTCCTCTCTTCTTA
EY943793       --> AGCTCATATCCTCGGGATTAGGATTCTTCTTCTTCCTTCCTCTCTTCTTA

               851    -    901
UN17711        --> GGTACTTTCGGGGTCTCTTCAGGTTTAGAATCAGTGAACAAGCTCTGGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY915912       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV529009       <-- GGTACTTTCGGGGTCTCTTCAGGTTTAGAATCc.................  Raphanus raphanistrum subsp. maritimus
FD535280       <-- GGTACTTTCGGGGTCTCTTCAGGTTTAGAATCc.................  Raphanus raphanistrum subsp. maritimus
FY433908       <-- GGTACTTTCGGTGTCTCTTCAGGTTTAGAATCAGTGAACAAGCTCTGGGT  Raphanus sativus cv GSK3-1
FY438841       <-- GGTACTTTCGGTGTCTCTTCAGGTTTAGAATCAGTGAACAAGCTCTGGGT  Raphanus sativus cv GSK3-1
EY915215       <-- GGTACTTTCGGGGTCTCTTCAGGTTTAGAATCAGTGAACAAGCTCTGGGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY948006       <-- GGTACTTTCGGTGTCTCTTCAGGTTTAGAATCAGTGAACAAGCTCTGGGT  Raphanus sativus cv Rat-Tail Radish #3870
FD576654       <-- GGTACTTTCGGGGTCTCTTCAGGTTTAGAATCAGTGAACAAGCTCTGGGT  Raphanus sativus cv Rat-Tail Radish #3870
FD938175       <-- GGTACTTTCGGGGTCTCTTCAGGTTTAGAATCAGTGAACAAGCTCTGGGT  Raphanus sativus var. oleiformis
EW734007       <-- GGTACTTTCGGGGTCTCTTCAGGTTTAGAATCAGTGAACAAGCTCTGGGT  Raphanus sativus cv Rat-Tail Radish #3870
FD568646       <-- GGTACTTTCGGGGTCTCTTCAGGTTTAGAATCAGTGAACAAGCTCTGGGT  Raphanus sativus cv Early Scarlet Globe
FD580032       <-- GGTACTTTCGGTGTCTCTTCAGGTTTAGAATCAGTGAACAAGCTCTGGGT  Raphanus sativus cv Rat-Tail Radish #3870
EV547864       <-- GGTACTTTCGGGGTCTCTTCAGGTTTAGAATCAGTGAACAAGCTCTGGGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX897303       <-- GGTACTTTCGGGGTCTCTTCAGGTTTAGAATAAGTGAACAAGCTCTGGGT  Raphanus sativus cv Early Scarlet Globe
EV531326       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD572956       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD581106       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD934618       --> ..................................................  Raphanus sativus var. oleiformis
EV532857       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD529852       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD530973       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY911106       --> G-TACTTT..........................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX901088       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EW739210       --> G-TACTTTCGGG-TCTCT................................  Raphanus sativus cv Rat-Tail Radish #3870
EY943793       --> GGTACTTTCGGTGTCTCTTCAG-TTTAGAATCAGTGAACAAGCTCTGGGT  Raphanus sativus cv Rat-Tail Radish #3870

               901    -    951
UN17711        --> GGGGTTAGAACCGTCATACCCTTCATTAGATTCAGGGATCAATGGCTGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY915912       <-- ..................................................
EV529009       <-- ..................................................
FD535280       <-- ..................................................
FY433908       <-- GGGGTTAGAACCGTCATACCCTTCATTAGATTCAGGGATCAATGGCTGAG
FY438841       <-- GGGGTTAGAACCGTCATACCCTTCATTAGATTCAGGGATCAATGGCTGAG
EY915215       <-- GGGGTTAGAACCGTCATACCCTTCATTAGATTCAGGGATCAATGGCTGAG
EY948006       <-- GGGGTTAGAACCGTCATACCCTACATTAGATTCAGGGATCAATGGCTGAG
FD576654       <-- GGGGTTAGAACCGTCATACCCTTCATTAGATTCAGGGATCAATGGCTGAG
FD938175       <-- GGGGTTAGAACCGTCATACCCTTCATTAGATTCAGGGATCAATGGCTGAG
EW734007       <-- GGGGTTAGAACCGTCATACCCTTCATTAGATTCAGGGATCAATGGCTGAG
FD568646       <-- GGGGTTAGAACCGTCATACCCTTCATTAGATTCAGGGATCAATGGCTGAG
FD580032       <-- GGGGTTAGAACCGTCATACCCTTCATTAGATTCAGGGATCAATGGCTGAG
EV547864       <-- GGGGTTAGAACCGTCATACCCTTCATTAGATTCAGGGATCAATGGCTGAG
EX897303       <-- GGGGTTAGAACCGTCATACCCTTCATTAGATTCAGGGATCAATGGCTGAG
EV531326       --> ..................................................
FD572956       --> ..................................................
FD581106       --> ..................................................
FD934618       --> ..................................................
EV532857       --> ..................................................
FD529852       --> ..................................................
FD530973       --> ..................................................
EY911106       --> ..................................................
EX901088       --> ..................................................
EW739210       --> ..................................................
EY943793       --> GGGGTTAGA-CCGTCATACCCTACATTAGATTCAGG-ATCAATGGCTGAG

               951    -   1001
UN17711        --> TGTCCCTAGTGCCTTCTATTTGACGGTCTTCAAACAATCGAGCGCGTTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY915912       <-- ..................................................
EV529009       <-- ..................................................
FD535280       <-- ..................................................
FY433908       <-- TGTCCCTAGTGCCTTCTATTTGACGGTCTTCAAACAATCGAGCGCGTTTG
FY438841       <-- TGTCCCTAGTGCCTTCTATTTGACGGTCTTCAAACAATCGAGCGCGTTTG
EY915215       <-- TGTCCCTAGTGCCTTCTATTTGACGGTCTTCAAACAATCGAGCGCGTTTG
EY948006       <-- TGTCCCTAGTGCCTTCTATTTGACGGTCTTCAAACAATCGAGCGCGTTTG
FD576654       <-- TGTCCCTAGTGCCTTCTATTTGACGGTCTTCAAACAATCGAGCGCGTTTG
FD938175       <-- TGTCCCTAGTGCCTTCTATTTGACGGTCTTCAAACAATCGAGCGCGTTTG
EW734007       <-- TGTCCCTAGTGCCTTCTATTTGACGGTCTTCAAACAATCGAGCGCGTTTG
FD568646       <-- TGTCCCTAGTGCCTTCTATTTGACGGTCTTCAAACAATCGAGCGCGTTTG
FD580032       <-- TGTCCCTAGTGCCTTCTATTTGACGGTCTTCAAACAATCGAGCGCGTTTG
EV547864       <-- TGTCCCTAGTGCCTTCTATTTGACGGTCTTCAAACAATCGAGCGCGTTTG
EX897303       <-- TGTCCCTAGTGCCTTCTATTTGACGGTCTTCAAACAATCGAGCGCGTTTG
EV531326       --> ..................................................
FD572956       --> ..................................................
FD581106       --> ..................................................
FD934618       --> ..................................................
EV532857       --> ..................................................
FD529852       --> ..................................................
FD530973       --> ..................................................
EY911106       --> ..................................................
EX901088       --> ..................................................
EW739210       --> ..................................................
EY943793       --> TGTCCCTAGTGCCTT...................................

               1001   -   1051
UN17711        --> TTGTTGAACACGTCGTGTGCAGAATCCATGTTCATAAGAGTACTTGAACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY915912       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV529009       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD535280       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FY433908       <-- TTGTTGAACACATCGTGTGCAGAATCCATGTTCACAAGAGTACTTGAACG  Raphanus sativus cv GSK3-1
FY438841       <-- TTGTTGAACACATCGTGTGCAGAATCCATGTTCACAAGAGTACTTGAACG  Raphanus sativus cv GSK3-1
EY915215       <-- TTGTTGAACACGTCGTGTGCAGAATCCATGTTCATAAGAGTACTTGAACG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY948006       <-- TTGTTGAACACATCGTGTGCAGAATCCATGTTCACAAGAGTACTTGAACG  Raphanus sativus cv Rat-Tail Radish #3870
FD576654       <-- TTGTTGAACACGTCGTGTGCAGAATCCATGTTCATAAGAGTACTTGAACG  Raphanus sativus cv Rat-Tail Radish #3870
FD938175       <-- TTGTTGAACACGTCGTGTGCAGAATCCATGTTCATAAGAGTACTTGAACG  Raphanus sativus var. oleiformis
EW734007       <-- TTGTTGAACACGTCGTGTGCAGAATCCATATTCATAAGAGTACTTGAACG  Raphanus sativus cv Rat-Tail Radish #3870
FD568646       <-- TTGTTGAACACGTCGTGTGCAGAATCCATGTTCATAAGAGTACTTGAACG  Raphanus sativus cv Early Scarlet Globe
FD580032       <-- TTGTTGAACACATCGTGTGCAGAATCCATGTTCACAAGAGTACTTGAACG  Raphanus sativus cv Rat-Tail Radish #3870
EV547864       <-- TTGTTGAACACATCGTGTGCAGAATCCATGTTCATAAGAGTACTTGAACG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX897303       <-- TTGTTGAACACGTCGTGTGCAGAATCCATGTTCATAAGAGTACTTGAACG  Raphanus sativus cv Early Scarlet Globe
EV531326       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD572956       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD581106       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD934618       --> ..................................................  Raphanus sativus var. oleiformis
EV532857       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD529852       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD530973       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY911106       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX901088       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EW739210       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY943793       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870

               1051   -   1101
UN17711        --> GTGGATGATCTCAGATTGAAATGTGAATTATCTGAAAACGGAAAGGAAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY915912       <-- ..................................................
EV529009       <-- ..................................................
FD535280       <-- ..................................................
FY433908       <-- GTGGATGATCTCAGATTGAAATGTGAATTATCTGAAAACGGAAAGGAAGT
FY438841       <-- GTGGATGATCTCAGATTGAAATGTGAATTATCTGAAAACGGAAAGGAAGT
EY915215       <-- GTGGATGATCTCAGATTGAAATGTGAATTATCTGAAAACGGAAAGGAAGT
EY948006       <-- GTGGATGATCTCAGATTGAAATGTGAAT--TCTGAAAACGGAAAGGAAGT
FD576654       <-- GTGGATGATCTCAGATTGAAATGTGAATTATCTGAAAACGGAAAGGAAGT
FD938175       <-- GTGGATGATCTCAGATTGAAATGTGAATTATCTGAAAACGGAAAGGAAGT
EW734007       <-- GTGGATGATCTCAGATTGAAATGTGAATTATCTGAAAACGGAAAGGAAGT
FD568646       <-- GTGGATGATCTCAGATTGAAATGTGAATTATCTGAAAACGGAAAGGAAGT
FD580032       <-- GTGGATGATCTCAGATTGAAATGTGAATTATCTGAAAACGGAAAGGAAGT
EV547864       <-- GTGGATGATCTCAGATTGAAATGTGAATTATCTGAAAACGGAAAGGAAGT
EX897303       <-- GTGGATGATCTCAGATTGAAATGTGAATTATCTGAAAACGGAAAGGAAGT
EV531326       --> ..................................................
FD572956       --> ..................................................
FD581106       --> ..................................................
FD934618       --> ..................................................
EV532857       --> ..................................................
FD529852       --> ..................................................
FD530973       --> ..................................................
EY911106       --> ..................................................
EX901088       --> ..................................................
EW739210       --> ..................................................
EY943793       --> ..................................................

               1101   -   1151
UN17711        --> GGATCTAACTAACTAGAGTAATGTGGTCAGCTTTCCTTAGCCCCTAATGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY915912       <-- ..................................................
EV529009       <-- ..................................................
FD535280       <-- ..................................................
FY433908       <-- GGATCTAACTAACTAGAGTAATGTGGTCAGCTTTCCTTAGCCCCTAATGG
FY438841       <-- GGATCTAACTAACTAGAGTAATGTGGTCAGCTTTCCTTAGCCCCTAATGG
EY915215       <-- GGATCTAACTAACTAGAGTAATGTGGTCAGCTTTCCTTAGCCCCTAATGG
EY948006       <-- GGATCTAACTAACTAGAGTAATGTGGTCAGCTTTCCTTAGCCCCTAATGG
FD576654       <-- GGATCTAACTAACTAGAGTAATGTGGTCAGCTTTCCTTAGCCCCTAATGG
FD938175       <-- GGATCTAACTAACTAGAGTAATGTGGTCAGCTTTCCTTAGCCCCTAATGG
EW734007       <-- GGATCTAACTAACTAGAGTAATGTGGTCAGCTTTCCTTAGCCCCTAATGG
FD568646       <-- GGATCTAACTAACTGGAGTAATGTGGTCAGCTTTCCTTAGCCCCTAATGG
FD580032       <-- GGATCTAACTAACTAGAGTAATGTGGTCAGCTTTCCTTAGCCCCTAATGG
EV547864       <-- GGATCTAACTAACTAGAGTAATGTGGTCAGCTTTCCTTAGCCCCTAATGG
EX897303       <-- GGATCTAACTAACTAGAGTAATGTGGTCAGCTTTCCTTAGCCCCTAATGG
EV531326       --> ..................................................
FD572956       --> ..................................................
FD581106       --> ..................................................
FD934618       --> ..................................................
EV532857       --> ..................................................
FD529852       --> ..................................................
FD530973       --> ..................................................
EY911106       --> ..................................................
EX901088       --> ..................................................
EW739210       --> ..................................................
EY943793       --> ..................................................

               1151   -   1201
UN17711        --> CTTTAGTCGAGGAGGATAAGGTTGAGGAAGAAAAGGCGTCGTGACATATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY915912       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV529009       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD535280       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FY433908       <-- CTTTAGTCGAGGAGGATAAGGTTGAGGAAGAAAAGGCGTCGTGACATATT  Raphanus sativus cv GSK3-1
FY438841       <-- CTTTAGTCGAGGAGGATAAGGTTGAGGAAGAAAAGGCGTCGTGACATATT  Raphanus sativus cv GSK3-1
EY915215       <-- CCTTAGTCGAGGAGGATAAGGTTGAGGAAGAAAGGGCGTCGTGACATATT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY948006       <-- CTTTAGTCGAGGAGGATAAGGTTGAGGAAGAAAAGGCGTCGTcc......  Raphanus sativus cv Rat-Tail Radish #3870
FD576654       <-- CTTTAGTCGAGGAGGATAAGGTTGAGGAAGAAAGGGCGTCGTGACATATT  Raphanus sativus cv Rat-Tail Radish #3870
FD938175       <-- CTTTAGTCGAGGAGGATAAGGTTGAGGAAGAAAAGGCGTCGTGACATATT  Raphanus sativus var. oleiformis
EW734007       <-- CTTTAGTCGAGGAGGATAAGGTTGAGGAAGAAAGGGCGTCGTGACATATT  Raphanus sativus cv Rat-Tail Radish #3870
FD568646       <-- CTTTAGTCGAGGAGGATAAGGTTGAGGAAGAAAGGGCGTCGTGACATATT  Raphanus sativus cv Early Scarlet Globe
FD580032       <-- CTTTAGTCGAGGAGGATAAGGTTGAGGAAGAAAAGGCGTCGTGACATATT  Raphanus sativus cv Rat-Tail Radish #3870
EV547864       <-- TTTTAGTCGAGGAGGATAAGGTTGAGGAAGAAAAGGCGTCGTGACATATT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX897303       <-- CTTTAGTCGAGGAGGATAAGGTTGAGGAAGAAAGGGCGTCGTGACATATT  Raphanus sativus cv Early Scarlet Globe
EV531326       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD572956       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD581106       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD934618       --> ..................................................  Raphanus sativus var. oleiformis
EV532857       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD529852       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD530973       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY911106       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX901088       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EW739210       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY943793       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870

               1201   -   1251
UN17711        --> CTCAGATAAT---CAAATCAAGTAAACAGAATTAGATAAACGAAACGACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY915912       <-- ..................................................
EV529009       <-- ..................................................
FD535280       <-- ..................................................
FY433908       <-- CTCAGATA..........................................
FY438841       <-- CTCAGATAATAATCAAATCAAGTAAACAGAATTAGATAAACGAAACGACG
EY915215       <-- CTCAGATAAT---CAAATCAAGTAAACAGAATTAGATAAACGAAACGACG
EY948006       <-- ..................................................
FD576654       <-- CTCAGATAAT---CAAATCAAGTAAACAGAATTAGATAAACGAAACGACG
FD938175       <-- CTCAGATAAT---CAAATCAAGTAAACAGAATTAGATAAACGAAACGACG
EW734007       <-- CTCAGATAAT---CAAATCAAGTAAACAGAATTAAATAAACGAAACGACG
FD568646       <-- CTCAGATAAT---CAAATCAAGTAAACAGAATTAGATAAACGAAACGACG
FD580032       <-- CTCAGATAATAATCAAATCAAGTAAACAGAATTAGATAAACGAAACGACG
EV547864       <-- CTCAGATAATAATCAAATCAAGTAAACAGAATTAGATATACGAAACGACG
EX897303       <-- CTCAGATAAT---CAAATCAAGTAAACAGAATTAGATAAACGAAACGACG
EV531326       --> ..................................................
FD572956       --> ..................................................
FD581106       --> ..................................................
FD934618       --> ..................................................
EV532857       --> ..................................................
FD529852       --> ..................................................
FD530973       --> ..................................................
EY911106       --> ..................................................
EX901088       --> ..................................................
EW739210       --> ..................................................
EY943793       --> ..................................................

               1251   -   1301
UN17711        --> TCGGAGAACCCGATGGCCCGAAGAGA-GAACACTTTTCAGATCTGAACCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY915912       <-- ..................................................
EV529009       <-- ..................................................
FD535280       <-- ..................................................
FY433908       <-- ..................................................
FY438841       <-- CCGGAGAACCCGATGGCCCGAAGAGAAAAACACTTTTCAGATCTGAACCC
EY915215       <-- TCcc..............................................
EY948006       <-- ..................................................
FD576654       <-- TCGGAGAACCCGATGGCCCGAAGAGA-GAACACTTTTCAGATCc......
FD938175       <-- CCGGAGAACCCGATGGTCCGAAGAGA-ACCCACTTTTCAGATCTGAACCC
EW734007       <-- TCGGAGAACCTGATGGCCCGAAGAGA-GAACACTTTTCAGATCTcc....
FD568646       <-- TCGGAGAACCCGATGGCCCGAAGAGA-GAACACTTTTCAGATCTGAACCC
FD580032       <-- CCGGAGAACCCGATGGC.................................
EV547864       <-- CCGGAGAACCCGATGGCCCGAAGAGA-GAACACTTTTCAGATCTGAACCC
EX897303       <-- TCGGAGAACCCGATGGCCCGAAGAGA-GAACACTTTTCAGATCTGAACCC
EV531326       --> ..................................................
FD572956       --> ..................................................
FD581106       --> ..................................................
FD934618       --> ..................................................
EV532857       --> ..................................................
FD529852       --> ..................................................
FD530973       --> ..................................................
EY911106       --> ..................................................
EX901088       --> ..................................................
EW739210       --> ..................................................
EY943793       --> ..................................................

               1301   -   1351
UN17711        --> AATCTCTCTCACTGTCTAGTTT......
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY915912       <-- ............................
EV529009       <-- ............................
FD535280       <-- ............................
FY433908       <-- ............................
FY438841       <-- AATCTCTCT...................
EY915215       <-- ............................
EY948006       <-- ............................
FD576654       <-- ............................
FD938175       <-- AATCTCTCTAACTGTCTAGTTTaaaaaa
EW734007       <-- ............................
FD568646       <-- AATCCCTCTCACTGTCTccc........
FD580032       <-- ............................
EV547864       <-- AATCTCTCTCACTGTCTAGTTT......
EX897303       <-- AATCTCTCTCACTGTCTcc.........
EV531326       --> ............................
FD572956       --> ............................
FD581106       --> ............................
FD934618       --> ............................
EV532857       --> ............................
FD529852       --> ............................
FD530973       --> ............................
EY911106       --> ............................
EX901088       --> ............................
EW739210       --> ............................
EY943793       --> ............................