RadishBase

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Alignment for radish unigene UN17715

               1      -     51
UN17715        --> TAGCAGTAGTAATAAACAAAACAATTTGCATCATTTAGTATAAAAATACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX773227       <-- .....................CAATTTGCATCATTTAGTATAAAAATACA
EY914019       <-- ..................................................
EV570044       <-- ..................................................
EV569850       <-- ..................................................
EV569298       <-- ..................................................
EW723764       <-- ..................................................
EY931732       <-- ..................................................
FD532684       <-- ..................................................
EY939433       <-- ..................................................
FD987766       <-- ..................................................
EY937805       <-- ..................................................
FD568534       <-- ..................................................
EW728272       --> TAGCAGTAGTAATAAACAAAACAATTTGCATCATTTAGTATAAAAATACA
EW727180       --> ..GCAGTAGTAATAAACAAAACAATTTGCATCATTTAGTATAAAAATACA
EW727482       --> ..GCAGTAGTAATAAACAAAACAATTTGCATCATTTAGTATAAAAATACA
FD572863       --> .............gAACAAAACAATTTGCATCATTTAGTATAAAAATACA
FD529078       --> .................AAAACAATTTGCATCATTTAGTATAAAAATACA
FD547740       --> ......................AATTTGCATCATTTAGTATAAAAATACA
EX777050       --> ........................TTTGCATCATTTAGTATAAAAATACA
EY910146       --> ..................................................
FD983749       --> ..................................................
EV574295       --> ..................................................
EV574439       --> ..................................................
EV573791       --> ..................................................

               51     -    101
UN17715        --> CAACTGTAAACGCAAACAAGAGAACGTGATAGATAATACAAAAGG-TAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX773227       <-- CAACTGTAAACGCAAACAAGAGAACGTGATAGATAATACAAAAGG-TAGC  Raphanus raphanistrum subsp. landra
EY914019       <-- ........AACGCAAACAAGAGAACGTGATAGATAATACAAAAGG-TAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV570044       <-- .................................................t  Raphanus raphanistrum subsp. landra
EV569850       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV569298       <-- ..................................................  Raphanus raphanistrum subsp. landra
EW723764       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY931732       <-- ..................................................  Raphanus sativus var. oleiformis
FD532684       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY939433       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD987766       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY937805       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD568534       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EW728272       --> CAACTGTAAACGCAAATAAGAAAACGTAATAGATAATACAAAAGG-GGGC  Raphanus sativus cv Early Scarlet Globe
EW727180       --> CAATTGTAAACGCAAACAAGAGAACGTGATAGATAATACAAAAGG-GGGC  Raphanus sativus cv Early Scarlet Globe
EW727482       --> CAATTGTAAACGCAAACAAGAGAACGTGATAGATAATACAAAAGG-TGGC  Raphanus sativus cv Early Scarlet Globe
FD572863       --> CAACTGTAAACGCAAACAAGAGAACGTGATAGATAATACAAAAGG-TGGC  Raphanus sativus cv Early Scarlet Globe
FD529078       --> CAACTGTAAACGCAAACAAGAGAACGTGATAGATAATACAAAAGG-TAGC  Raphanus raphanistrum subsp. maritimus
FD547740       --> CAACTGTAAACGCAAACAAGAGAGCGTGAGAGATAATACAAAAGGGTGGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX777050       --> CAACTGTAAACGCAAACAAGAGAACGTGATAGATAATACAAAAGG-TAGC  Raphanus raphanistrum subsp. landra
EY910146       --> ........AACGCAAACAAGAGAACGTGATAGATAATACAAAAGG-TAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD983749       --> ........................CGTGATAGATAATACAAAAGG-TAGC  Raphanus raphanistrum subsp. landra
EV574295       --> ..................................................  Raphanus raphanistrum subsp. landra
EV574439       --> ..................................................  Raphanus raphanistrum subsp. landra
EV573791       --> ..................................................  Raphanus raphanistrum subsp. landra

               101    -    151
UN17715        --> AAAGACATATA--ACTTTTATCACACAGAAAGCCAGAAACGGATAAATAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX773227       <-- AAAGACATATA--ACTTTTATCACACAGAAAGCCAGAAACGGATAAATAA  Raphanus raphanistrum subsp. landra
EY914019       <-- AAAGACATATA--ACTTTTATCACACAGAAAGCCAGAAACGGATAAATAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV570044       <-- tttGACATATA--ACTTTTATCACACAGAAAGCCAGAAACGGATAAATAA  Raphanus raphanistrum subsp. landra
EV569850       <-- ..........................................ATAAATAA  Raphanus raphanistrum subsp. landra
EV569298       <-- ..................................................  Raphanus raphanistrum subsp. landra
EW723764       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY931732       <-- ..................................................  Raphanus sativus var. oleiformis
FD532684       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY939433       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD987766       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY937805       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD568534       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EW728272       --> AAAGACATATA-TAACTTTATCACACAGAAAGCCAGAAACGGATAAATAA  Raphanus sativus cv Early Scarlet Globe
EW727180       --> AAAGACATATA-TAACTTTATCACACAGAAAGCCAGAAACGGATAAATAA  Raphanus sativus cv Early Scarlet Globe
EW727482       --> AAAGACATATA-TAACTTTATCACACAGAAAGCCAGAAACGGATAAATAA  Raphanus sativus cv Early Scarlet Globe
FD572863       --> AAAGACATATA-TAACTTTATCACACAGAAAGCCAGAAACGGATAAATAA  Raphanus sativus cv Early Scarlet Globe
FD529078       --> AAAGACATATA--ACTTTTATCACACAGAAAGCCAGAAACGGATAAATAA  Raphanus raphanistrum subsp. maritimus
FD547740       --> AAAGACATATATAACTTTTATCACACAGAAAGCCAGAAACGGATAAATAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX777050       --> AAAGACATATA--ACTTTTATCACACAGAAAGCCAGAAACGGATAAATAA  Raphanus raphanistrum subsp. landra
EY910146       --> AAAGACATATA--ACTTTTATCACACAGAAAGCCAGAAACGGATAAATAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD983749       --> AAAGACATATA--ACTTTTATCACACAGAAAGCCAGAAACGGATAAATAA  Raphanus raphanistrum subsp. landra
EV574295       --> ...GACATATA--ACTTTTATCACACAGAAAGCCAGAAACGGATAAATAA  Raphanus raphanistrum subsp. landra
EV574439       --> ...GACATATA--ACTTTTATCACACAGAAAGCCAGAAACGGATAAATAA  Raphanus raphanistrum subsp. landra
EV573791       --> ...................gTCACACAGAAAGCCAGAAACGGATAAATAA  Raphanus raphanistrum subsp. landra

               151    -    201
UN17715        --> AA-CATTCACACCATTCGTTCATCAGGGACAAAGATTTGGTCGT-GT-TT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX773227       <-- AA-CATTCACACCATTCGTTCATCAGGGACAAAGATTTGGTCGT-GT-TT  Raphanus raphanistrum subsp. landra
EY914019       <-- AA-CATTCACACCATTCGTTCATCAGGGACAAAGATTTGGTCGT-GT-TT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV570044       <-- AA-CATTCACACCATTCGTTCATCAGGGACAAAGATTTGGTCGT-GT-TT  Raphanus raphanistrum subsp. landra
EV569850       <-- AA-CATTCACACCATTCGTTCATCAGGGACAAAGATTTGGTCGT-GT-TT  Raphanus raphanistrum subsp. landra
EV569298       <-- ................CGTTCATCAGGGACAAAGATTTGGTCGT-GT-TT  Raphanus raphanistrum subsp. landra
EW723764       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY931732       <-- ..................................................  Raphanus sativus var. oleiformis
FD532684       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY939433       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD987766       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY937805       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD568534       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EW728272       --> AAACATTCACACCATTCGTTCATCAGGGACAAAGATTTGGTCGT-GT-TT  Raphanus sativus cv Early Scarlet Globe
EW727180       --> AAACATTCACACCATTCGTTCATCAGGGACAAAGATTTGGTCGT-GT-TT  Raphanus sativus cv Early Scarlet Globe
EW727482       --> AAACATTCACACCATTCGTTCATCAGGGACAAAGATTTGGTCGT-GT-TT  Raphanus sativus cv Early Scarlet Globe
FD572863       --> AAACATTCACACCATTCGTTCATCAGGGACAAAGATTTGGTCGT-GT-TT  Raphanus sativus cv Early Scarlet Globe
FD529078       --> AA-CATTCACACCATTCGTTCATCAGGGACAAAGATTTGGTCGT-GT-TT  Raphanus raphanistrum subsp. maritimus
FD547740       --> AA-CATTCACACCATTCGTTCA---GGGACAAAGATTTGGTCGTCGAGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX777050       --> AA-CATTCACACCATTCGTTCATCAGGGACAAAGATTTGGTCGT-GT-TT  Raphanus raphanistrum subsp. landra
EY910146       --> AA-CATTCACACCATTCGTTCATCAGGGACAAAGATTTGGTCGT-GT-TT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD983749       --> AA-CATTCACACCATTCGTTCATCAGGGACAAAGATTTGGTCGT-GT-TT  Raphanus raphanistrum subsp. landra
EV574295       --> AA-CATTCACACCATTCGTTCATCAGGGACAAAGATTTGGTCGT-GT-TT  Raphanus raphanistrum subsp. landra
EV574439       --> AA-CATTCACACCATTCGTTCATCAGGGACAAAGATTTGGTCGT-GT-TT  Raphanus raphanistrum subsp. landra
EV573791       --> AA-CATTCACACCATTCGTTCATCAGGGACAAAGATTTGGTCGT-GT-TT  Raphanus raphanistrum subsp. landra

               201    -    251
UN17715        --> TAATAGATACAGAGAGGATTATTTGGTGAGTTTGAAGTACAAGATGAGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX773227       <-- TAATAGATACAGAGAGGATTATTTGGTGAGTTTGAAGTACAAGATGAGGA  Raphanus raphanistrum subsp. landra
EY914019       <-- TAATAGATACAGAGAGGATTATTTGGTGAGTTTGAAGTACAAGATGAGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV570044       <-- TAATAGATACAGAGAGGATTATTTGGTGAGTTTGAAGTACAAGATGAGGA  Raphanus raphanistrum subsp. landra
EV569850       <-- TAATAGATACAGAGAGGATTATTTGGTGAGTTTGAAGTACAAGATGAGGA  Raphanus raphanistrum subsp. landra
EV569298       <-- TAATAGATACAGAGAGGATTATTTGGTGAGTTTGAAGTACAAGATGAGGA  Raphanus raphanistrum subsp. landra
EW723764       <-- ..ATAGATACAGAGAGGATTACTTGGTGAGTTTGAAGTACAAGATGAGGA  Raphanus sativus cv Early Scarlet Globe
EY931732       <-- .....GATACAGAGAGGATTACTTGGTGAGTTTGAAGTACAAGATGAGGA  Raphanus sativus var. oleiformis
FD532684       <-- ...............................TTGAAGTACAAGATGAGGA  Raphanus raphanistrum subsp. maritimus
EY939433       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD987766       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY937805       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD568534       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EW728272       --> TAATAGATACAGAGAGGATTACTTGGTGAGTTTGAAGTACAAGATGAGGA  Raphanus sativus cv Early Scarlet Globe
EW727180       --> TAATAGATACAGAGAGGATTACTTGGTGAGTTTGAAGTACAAGATGAGGA  Raphanus sativus cv Early Scarlet Globe
EW727482       --> TAATAGATACAGAGAGGATTACTTGGTGAGTTTGAAGTACAAGATGAGGA  Raphanus sativus cv Early Scarlet Globe
FD572863       --> TAATAGATACAGAGAGGATTACTTGGTGAGTTTGAAGTACAAGATGAGGA  Raphanus sativus cv Early Scarlet Globe
FD529078       --> TAATAGATACAGAGAGGATTATTTGGTGAGTTTGAAGTACAAGATGAGGA  Raphanus raphanistrum subsp. maritimus
FD547740       --> TATTAGATACAGAGAGGATTACTTGGTGAGTTTGAAGTACAAGATGAGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX777050       --> TAATAGATACAGAGAGGATTATTTGGTGAGTTTGAAGTACAAGATGAGGA  Raphanus raphanistrum subsp. landra
EY910146       --> TAATAGATACAGAGAGGATTATTTGGTGAGTTTGAAGTACAAGATGAGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD983749       --> TAATAGATACAGAGAGGATTATTTGGTGAGTTTGAAGTACAAGATGAGGA  Raphanus raphanistrum subsp. landra
EV574295       --> TAATAGATACAGAGAGGATTATTTGGTGAGTTTGAAGTACAAGATGAGGA  Raphanus raphanistrum subsp. landra
EV574439       --> TAATAGATACAGAGAGGATTATTTGGTGAGTTTGAAGTACAAGATGAGGA  Raphanus raphanistrum subsp. landra
EV573791       --> TAATAGATACAGAGAGGGTTATTTGGTGAGTTTGAAGTACAAGATGAGGA  Raphanus raphanistrum subsp. landra

               251    -    301
UN17715        --> AAATAGCGGCGACCAAAGCGGTGATAATGGCTCCAATGGTCCATTTGTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX773227       <-- AAATAGCGGCGACCAAAGCGGTGATAATGGCTCCAATGGTCCATTTGTTC
EY914019       <-- AAATAGCGGCGACCAAAGCGGTGATAATGGCTCCAATGGTCCATTTGTTC
EV570044       <-- AAATAGCGGCGACCAAAGCGGTGATAATGGCTCCAATGGTCCATTTGTTC
EV569850       <-- AAATAGCGGCGACCAAAGCGGTGATAATGGCTCCAATGGTCCATTTGTTC
EV569298       <-- AAATAGCGGCGACCAAAGCGGTGATAATGGCTCCAATGGTCCATTTGTTC
EW723764       <-- AAATAGCGGCGAACAAAGCGGTGATAATGGCTCCAATGGTCCATTTGT-C
EY931732       <-- AAATAGCGGCGACCAAAGCGGTGATAATGGCTCCAATGGTCCATTTGTTC
FD532684       <-- AAATAGCGGCGACCAAAGCGGTGATAATGGCTCCAATGGTCCATTTGTTC
EY939433       <-- ..................................................
FD987766       <-- ..................................................
EY937805       <-- ..................................................
FD568534       <-- ..................................................
EW728272       --> AAATAGCGGCGAACAAAGCGGTGATAATGGCTCCAATGGTCCATTTGTTC
EW727180       --> AAATAGCGGCGACCAAAGCGGTGATAATGGCTCCAATGGTCCATTTGTTC
EW727482       --> AAATAGCGGCGACCAAAGCGGTGATAATGGCTCCAATGGTCCATTTGTTC
FD572863       --> AAATAGCGGCGACCAAAGCGGTGATAATGGCTCCAATGGTCCATTTGTTC
FD529078       --> AAATAGCGGCGACCAAAGCGGTGATAATGGCTCCAATGGTCCATTTGTTC
FD547740       --> AAATAGCGGCGACCAAAGCGGTGATAATGGCTCCAATGGTCCATTTGTTC
EX777050       --> AAATAGCGGCGACCAAAGCGGTGATAATGGCTCCAATGGTCCATTTGTTC
EY910146       --> AAATAGCGGCGACCAAAGCGGTGATAATGGCTCCAATGGTCCATTTGTTC
FD983749       --> AAATAGCGGCGACCAAAGCGGTGATAATGGCTCCAATGGTCCATTTGTTC
EV574295       --> AAATAGCGGCGACCAAAGCGGTGATAATGGCTCCAATGGTCCATTTGTTC
EV574439       --> AAATAGCGGCGACCAAAGCGGTGATAATGGCTCCAATGGTCCATTTGTTC
EV573791       --> AAATAGCGGCGACCAAAGCGGTGATAATGGCTCCAATGGTCCATTTGTTC

               301    -    351
UN17715        --> CTGTTCATCCTCCTCGTCATGCCCGTCAAGATTTTCTTGCTCTTTCCGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX773227       <-- CTGTTCATCCTCCTCGTCATGCCCGTCAAGATTTTCTTGCTCTTTCCGAC
EY914019       <-- CTGTTCATCCTCCTCGTCATGCCCGTCAAGATTTTCTTGCTCTTTCCGAC
EV570044       <-- CTGTTCATCCTCCTCGTCATGCCCGTCAAGATTTTCTTGCTCTTTCCGAC
EV569850       <-- CTGTTCATCCTCCTCGTCATGCCCGTCAAGATTTTCTTGCTCTTTCCGAC
EV569298       <-- CTGTTCATCCTCCTCGTCATGCCCGTCAAGATTTTCTTGCTCTTTCCGAC
EW723764       <-- CTGTTCATCCTCCTCGTCATGCCCGTCAAGATCTTCTTGCTCTTTCCGAC
EY931732       <-- CTGTTCATCCTCCTCGTCATGCCCATCAAGATCTTCTTGATCTTTCCGAC
FD532684       <-- CTGTTCATCCTCCTCGTCATGCCCGTCAAGATTTTCTTGCTCTTTCCGAC
EY939433       <-- ....TCATC-TCCTCGTCATGCCCGTCAAGATCTTCTTGCTCTTTCCGAC
FD987766       <-- ....TCATCCTCCTCGTCATGCCCGTCAAGATTTTCTTGCTCTTTCCGAC
EY937805       <-- ............................aagatcTCTTGCTCTTTCCGAC
FD568534       <-- ..................................................
EW728272       --> CTGTTCATCCTCCTCGTCATGCCCGTCAA.....................
EW727180       --> CTGTTCATCCTCCTCGTCATGCCCGTCAAGATCTTCTTGCTCTTTCCGAC
EW727482       --> CTGTTCATCCTCCTCGTCATGCCCGTCAAGATCTTCTTGCTCTTTCCGAC
FD572863       --> CTGTTCATCCTCCTCGTCATGCCCGTCAAGATCTTCTTGCTCTTTCCGAC
FD529078       --> CTGTTCATCCTCCTCGTCATGCCCGTCAAGATTTTCTTGCTCTTTCCGAC
FD547740       --> CTGTTCATCCTCCTCGCCATGCCCGTCAAGATTTTCTTGCTCTTTCCGAC
EX777050       --> CTGTTCATCCTCCTCGTCATGCCCGTCAAGATTTTCTTGCTCTTTCCGAC
EY910146       --> CTGTTCATCCTCCTCGTCATGCCCGTCAAGATTTTCTTGCTCTTTCCGAC
FD983749       --> CTGTTCATCCTCCTCGTCATGCCCGTCAAGATTTTCTTGCTCTTTCCGAC
EV574295       --> CTGTTCATCCTCCTCGTCATGCCCGTCAAGATTTTCTTGCTCTTTCCGAC
EV574439       --> CTGTTCATCCTCCTCGTCATGCCCGTCAAGATTTTCTTGCTCTTTCCGAC
EV573791       --> CTGTTCATCCTCCTCGTCATGCCCGTCAAGATTTTCTTGCTCTTTCCGAC

               351    -    401
UN17715        --> ATTTTCGTCTACTCCACTAAGCGTGTCGCCAGTGCGAAGGAGAGACTGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX773227       <-- ATTTTCGTCTACTCCACTAAGCGTGTCGCCAGTGCGAAGGAGAGACTGTC  Raphanus raphanistrum subsp. landra
EY914019       <-- ATTTTCGTCTACTCCACTAAGCGTGTC.......................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV570044       <-- ATTTTCGTCTACTCCACTAAGCGTGTCGCCAGTGCGAAGGAGAGACTGTC  Raphanus raphanistrum subsp. landra
EV569850       <-- ATTTTCGTCTACTCCACTAAGCGTGTCGCCAGTGCGAAGGAGAGACTGTC  Raphanus raphanistrum subsp. landra
EV569298       <-- ATTTTCGTCTACTCCACTAAGCGTGTCGCCAGTGCGAAGGAGAGACTGTC  Raphanus raphanistrum subsp. landra
EW723764       <-- ATTATCGTCTACTCCACTAAGCGTGTCGCCAGTGCGAAGGAGAGACTGTC  Raphanus sativus cv Early Scarlet Globe
EY931732       <-- ATTATCGTCTACTCCACTAAGCGTGTCGCCAGTGCGAAGGAGAGACTGTC  Raphanus sativus var. oleiformis
FD532684       <-- ATTTTCGTCTACTCCACTAAGCGTGTCGCCAGTGCGAAGGAGAGACTGTC  Raphanus raphanistrum subsp. maritimus
EY939433       <-- ATTATCGTCTACTCCACTAAGCGTGTCGCCAGTGCGAAGGAGAGACTGTC  Raphanus sativus cv Early Scarlet Globe
FD987766       <-- ATTTTCGTCTACTCCACTAAGCGTGTCGCCAGTGCGAAGGAGAGACTGTC  Raphanus raphanistrum subsp. landra
EY937805       <-- ATTATCGTCTACTCCACTAAGCGTGTCGCCAGTGCGAAGGAGAGACTGTC  Raphanus sativus cv Early Scarlet Globe
FD568534       <-- ATTATCGTCTACTCCACTAAGCGTGTCGCCAGTGCGAAGGAGAGACTGTC  Raphanus sativus cv Early Scarlet Globe
EW728272       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EW727180       --> ATTATCGTCTACTCCACTAAGCGTGTCGCCAGTGCGAAGGAGAGACTGTC  Raphanus sativus cv Early Scarlet Globe
EW727482       --> ATTATCGTCTACTCCACTAAGCGTGTCGCCAGTGCGAAGGAGAGACTGTC  Raphanus sativus cv Early Scarlet Globe
FD572863       --> ATTATCGTCTACTCCACTAAGCGTGTCGCCAGTGCGAAGGAGAGACTGTC  Raphanus sativus cv Early Scarlet Globe
FD529078       --> ATTTTCGTCTACTCCACTAAGCGTGTCGCCAGTGCGAAGGAGAGACTGTC  Raphanus raphanistrum subsp. maritimus
FD547740       --> ATTATCGTCTACTCCACTAAGCGTGTCGCCAGTGCGAAGGAGAGACTGTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX777050       --> ATTTTCGTCTACTCCACTAAGCGTGTCGCCAGTGCGAAGGAGAGACTGTC  Raphanus raphanistrum subsp. landra
EY910146       --> ATTTTCGTCTACTCCACTAAGCGTGT........................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD983749       --> ATTTTCGTCTACTCCACTAAGCGTGTCGCCAGTGCGAAGGAGAGACTGTC  Raphanus raphanistrum subsp. landra
EV574295       --> ATTTTCGTCTACTCCACTAAGCGTGTCGCCAGTGCGAAGGAGAGACTGTC  Raphanus raphanistrum subsp. landra
EV574439       --> ATTTTCGTCTACTCCACTAAGCGTGTCGCCAGTGCGAAGGAGAGACTGTC  Raphanus raphanistrum subsp. landra
EV573791       --> ATTTTCGTCTACTCCACTAAGCGTGTCGCCAGTGCGAAGGAGAGACTGTC  Raphanus raphanistrum subsp. landra

               401    -    451
UN17715        --> TCTGACTGTGCAAGTCTTGGAGGACAGAGACGCCAAGCTCTTCAGTCTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX773227       <-- TCTGACTGTGCAAGTCTTGGAGGACAGAGACGCCAAGCTCTTCAGTCTCA
EY914019       <-- ..................................................
EV570044       <-- TCTGACTGTGCAAGTCTTGGAGGACAGAGACGCCAAGCTCTTCAGTCTCA
EV569850       <-- TCTGACTGTGCAAGTCTTGGAGGACAGAGACGCCAAGCTCTTCAGTCTCA
EV569298       <-- TCTGACTGTGCAAGTCTTGGAGGACAGAGAAGCCAAGCTCTTCAGTCTCA
EW723764       <-- TCTGACTGTGCAAGTCTTGGAGGACAGAGACGCCAAGCTCTTCAGTCTCA
EY931732       <-- TCTGACT...........................................
FD532684       <-- TCTGACTGTGCAAGTCTTGGAGGACAGAGACGCCAAGCTCTTCAGTCTCA
EY939433       <-- TCTGACTGTGCAAGTCTTGGAGGACAGAGACGCCAAGCTCTTCAGTCTCA
FD987766       <-- TCTGACTGTGCAAGTCTTGGAGGACAGAGACGCCAAGCTCTTCAGTCTCA
EY937805       <-- TCTGACTGTGCAAGTCTTGGAGGACAGAGACGCCAAGCTCTTCAGTCTCA
FD568534       <-- TCTGACTGTGCAAGTCTTGGAGGACAGAGACGCCAAGCTCTTCAGTCTCA
EW728272       --> ..................................................
EW727180       --> TCTGACTGTGCAAGTCTTGGAGGACAGAGACGCCAAGCTCTTCAGTCTCA
EW727482       --> TCTGACTGTGCAAGTCTTGGAGGACAGAGACGCCAAGCTCTTCAGTCTCA
FD572863       --> TCTGACTGTGCAAGTCTTGGAGGACAGAGACGCCAAGCTCTTCAGTCTCA
FD529078       --> TCTGACTGTGCAAGTCTTGGAGGACAGAGACGCCAAGCTCTTCAGTCTCA
FD547740       --> TCTGACTGTGCAAGTCTTGGAGGACAGAGACGCCAAGCTCTTCAGTCTCA
EX777050       --> TCTGACTGTGCAAGTCTTGGAGGACAGAGACGCCAAGCTCTTCAGTCTCA
EY910146       --> ..................................................
FD983749       --> TCTGACTGTGCAAGTCTTGGAGGACAGAGACGCCAAGCTCTTCAGTCTCA
EV574295       --> TCTGACTGTGCAAGTCTTGGAGGACAGAGACGCCAAGCTCTTCAGTCTCA
EV574439       --> TCTGACTGTGCAAGTCTTGGAGGACAGAGACGCCAAGCTCTTCAGTCTCA
EV573791       --> TCTGACTGTGCAAGTCTTGGAGGACAGAGACGCCAAGCTCTTCAGTCTCA

               451    -    501
UN17715        --> ATCATCATTCTTCGACTGTCCTTGATTCTATCAGTGGTACGACCCAATCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX773227       <-- ATCATCATTCTTCGACTGTCCTTGATTCTATCAGTGGTACGACCCAATCG  Raphanus raphanistrum subsp. landra
EY914019       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV570044       <-- ATCATCATTCTTCGACTGTCCTTGATTCTATCAGTGGTACGACCCAATCG  Raphanus raphanistrum subsp. landra
EV569850       <-- ATCATCATTCTTCGACTGTCCTTGATTCTATCAGTGGTACGACCCAATCG  Raphanus raphanistrum subsp. landra
EV569298       <-- ATCATCATTCTTCGACTGTCCTTGATTCTATCAGTGGTTCGACCCAATCG  Raphanus raphanistrum subsp. landra
EW723764       <-- ATCATCATTCTTCGACCGTCCTTGATTCTGTCAGTGGTACGACCCAATCG  Raphanus sativus cv Early Scarlet Globe
EY931732       <-- ..................................................  Raphanus sativus var. oleiformis
FD532684       <-- ATCATCATTCTTCGACTGTCCTTGATTCTATCAGTGGTACGACCCAATCG  Raphanus raphanistrum subsp. maritimus
EY939433       <-- ATCATCATTCTTCGACTGTCCTTGATTCTGTCAGTGGTACGACCCAATCG  Raphanus sativus cv Early Scarlet Globe
FD987766       <-- ATCATCATTCTTCGACTGTCCTTGATTCTATCAGTGGTACGACCCAATCG  Raphanus raphanistrum subsp. landra
EY937805       <-- ATCATCATTCTTCGACTGTCCTCGATTCTGTCAGTGGTACGACCCAATCG  Raphanus sativus cv Early Scarlet Globe
FD568534       <-- ATCATCATTCTTCGACTGTCCTTGATTCTGTCAGTGGTACGACCCAATCG  Raphanus sativus cv Early Scarlet Globe
EW728272       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EW727180       --> ATCATCATTCTTCGACTGTCCTTGATTCTGTCAGTGGTACGACCCAATCG  Raphanus sativus cv Early Scarlet Globe
EW727482       --> ATCATCATTCTTCGACTGTCCTTGATTCTGTCAGTGGTACGACCCAATCG  Raphanus sativus cv Early Scarlet Globe
FD572863       --> ATCATCATTCTTCGACTGTCCTTGATTCTGTCAGTGGTACGACCCAATCG  Raphanus sativus cv Early Scarlet Globe
FD529078       --> ATCATCATTCTTCGACTGTCCTTGATTCTATCAGTGGTACGACCCAATCG  Raphanus raphanistrum subsp. maritimus
FD547740       --> ATCATCATTCTTCGACTGTCCTTGATTCTGTCTGTGGTACGACCCAATCG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX777050       --> ATCATCATTCTTCGACTGTCCTTGATTCTATCAGTGGTACGACCCAATCG  Raphanus raphanistrum subsp. landra
EY910146       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD983749       --> ATCATCATTCTTCGACTGTCCTTGATTCTATCAGTGGTACGACCCAATCG  Raphanus raphanistrum subsp. landra
EV574295       --> ATCATCATTCTTCGACTGTCCTTGATTCTATCAGTGGTACGACCCAATCG  Raphanus raphanistrum subsp. landra
EV574439       --> ATCATCATTCTTCGACTGTCCTTGATTCTATCAGTGGTACGACCCAATCG  Raphanus raphanistrum subsp. landra
EV573791       --> ATCATCATTCTTCGACTGTCCTTGATTCTATCAGTGGTACGACCCAATCG  Raphanus raphanistrum subsp. landra

               501    -    551
UN17715        --> ATCAGTGGACATCATCAATCTCGCTCTTTGATCAGCTGAAGCCGTCTTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX773227       <-- ATCAGTGGACATCATCAATCTCGCTCTTTGATCAGCTGAAGCCGTCTTAG  Raphanus raphanistrum subsp. landra
EY914019       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV570044       <-- ATCAGTGGACATCATCAATCTCGCTCTTTGATCAGCTGAAGCCGTCTTAG  Raphanus raphanistrum subsp. landra
EV569850       <-- ATCAGTGGACATCATCAATCTCGCTCTTTGATCAGCTGAAGCCGTCTTAG  Raphanus raphanistrum subsp. landra
EV569298       <-- ATCAGTGGACATCATCAATCTCGCTCTTTGATCAGCTGAAGCCGTCTTAG  Raphanus raphanistrum subsp. landra
EW723764       <-- ATCAGTTGACATCATCAATCTGGCTCTTTGATCAGCTGAAGCCGTCTTAG  Raphanus sativus cv Early Scarlet Globe
EY931732       <-- ..................................................  Raphanus sativus var. oleiformis
FD532684       <-- ATCAGTGGACATCATCAATCTCGCTCTTTGATCAGCTGAAGCCGTCTTAG  Raphanus raphanistrum subsp. maritimus
EY939433       <-- ATCAGTTGACATCATCAATCTGGCTCTTTGATCAGCTGTAGCCGTCTTAG  Raphanus sativus cv Early Scarlet Globe
FD987766       <-- ATCAGTGGACATCATCAATCTCGCTCTTTGATCAGCTGAAGCCGTCTTAG  Raphanus raphanistrum subsp. landra
EY937805       <-- ATCAGTTGACATCATCAATCTGGCTCTTTGATCAGCTGAAGCCGTCTTAG  Raphanus sativus cv Early Scarlet Globe
FD568534       <-- ATCAGTTGACATCATCAATCTGGCTCTTTGATCAGCTGAAGCCGTCTTAG  Raphanus sativus cv Early Scarlet Globe
EW728272       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EW727180       --> ATCAGTTGACATCATCAATCTGGCTCTTTGATCAGCTGAAGCCGTCTTAG  Raphanus sativus cv Early Scarlet Globe
EW727482       --> ATCAGTTGACATCATCAATCTGGCTCTTTGATCAGCTGAAGCCGTCTTAG  Raphanus sativus cv Early Scarlet Globe
FD572863       --> ATCAGTTGACATCATCAATCTGGCTCTTTGATCAGCTGAAGCCGTCTTAG  Raphanus sativus cv Early Scarlet Globe
FD529078       --> ATCAGTGGACATCATCAATCTCGCTCTTTGATCAGCTGAAGCCGTCTTAG  Raphanus raphanistrum subsp. maritimus
FD547740       --> ATCAGTTGACATCATCAATCTCGCTCTCTGATCAGCTGAAGCCGTCTTAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX777050       --> ATCAGTGGACATCATCAATCTCGCTCTTTGATCAGCTGAAGCCGTCTTAG  Raphanus raphanistrum subsp. landra
EY910146       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD983749       --> ATCAGTGGACATCATCAATCTCGCTCTTTGATCAGCTGAAGCCGTCTTAG  Raphanus raphanistrum subsp. landra
EV574295       --> ATCAGTGGACATCATCAATCTCGCTCTTTGATCAGCTGAAGCCGTCTTAG  Raphanus raphanistrum subsp. landra
EV574439       --> ATCAGTGGACATCATCAATCTCGCTCTTTGATCAGCTGAAGCCGTCTTAG  Raphanus raphanistrum subsp. landra
EV573791       --> ATCAGTGGGCATCATCAATCTCGCTCTTTGATCAGCTGAAGCCGTCTTAG  Raphanus raphanistrum subsp. landra

               551    -    601
UN17715        --> TGTCAGCAAGGCCAGCTTCGAGCAAGTCGTCACGAGCAGCAGCGTTCAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX773227       <-- TGTCAGCAAGGCCAGCTTCGAGCAAGTCGTCACGAGCAGCAGCGTTCAAG  Raphanus raphanistrum subsp. landra
EY914019       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV570044       <-- TGTCAGCAAGGCCAGCTTCGAGCAAGTCGTCACGAGCAGCAGCGTTCAAG  Raphanus raphanistrum subsp. landra
EV569850       <-- TGTCAGCAAGGCCAGCTTCGAGCAAGTCGTCACGAGCAGCAGCGTTCAAG  Raphanus raphanistrum subsp. landra
EV569298       <-- TGTCAGCAAGGCCAGCTTCGAGCAAGTCGTCACGAGCAGCAGCGTTCAAG  Raphanus raphanistrum subsp. landra
EW723764       <-- TGTCAGCGAGGCCAGCTGCGAGCAAGTCGTCACGAGCAGCAGCGTTCAAG  Raphanus sativus cv Early Scarlet Globe
EY931732       <-- ..................................................  Raphanus sativus var. oleiformis
FD532684       <-- TGTCAGCAAGGCCAGCCTCGAGCAAGTCGTCACGAGCAGCAGCGTTCAAG  Raphanus raphanistrum subsp. maritimus
EY939433       <-- TGTCAGCGAGGCCAGCTTCGAGCAAGTCGTCACGAGCAGCAGCGTTCAAG  Raphanus sativus cv Early Scarlet Globe
FD987766       <-- TGTCAGCAAGGCCAGCTTCGAGCAAGTCGTCACGAGCAGCAGCGTTCAAG  Raphanus raphanistrum subsp. landra
EY937805       <-- TGTCAGCGAGGCCAGCTTCGAGCAAGCCGTCACGAGCAGCAGCGTTCAAG  Raphanus sativus cv Early Scarlet Globe
FD568534       <-- TGTCAGCGAGGCCAGCTTCGAGCAAGTCGTCACGAGCAGCAGCGTTCAAG  Raphanus sativus cv Early Scarlet Globe
EW728272       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EW727180       --> TGTCAGCGAGGCCAGCTTCGAGCAAGTCGTCACGAGCAGCAGCGTTCAAG  Raphanus sativus cv Early Scarlet Globe
EW727482       --> TGT...............................................  Raphanus sativus cv Early Scarlet Globe
FD572863       --> TGTCAGCGAGGCCAGCTTCGAGCAAGTCGTCACGAGCAGCAGCGTTCAAG  Raphanus sativus cv Early Scarlet Globe
FD529078       --> TGTCAGCAAGGCCAGCCTCGAGCAAGTCGTCACGAGCAGCAGCGTTCAAG  Raphanus raphanistrum subsp. maritimus
FD547740       --> TGTCAGCGAGGCCAGCTTCGAGCAAGTCGTCACGAGCAGCAGCGTTCAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX777050       --> TGTCAGCAAGGCCAGCTTCGAGCAAGTCGTCACGAGCAGCAGCGTTCAAG  Raphanus raphanistrum subsp. landra
EY910146       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD983749       --> TGTCAGCAAGGCCAGCTTCGAGCAAGTCGTCACGAGCAGCAGCGTTCAAG  Raphanus raphanistrum subsp. landra
EV574295       --> TGTCAGCAAGGCCAGCTTCGAGCAAGTCGTCACGAGCAGCAGCGTTCAAG  Raphanus raphanistrum subsp. landra
EV574439       --> TGTCAGCAAGGCCAGCTTCGAGCAAGTCGTCACGAGCAGCAGCGTTCAAG  Raphanus raphanistrum subsp. landra
EV573791       --> TGTCAGCAAGGCCAGCTTCGAGCAAGTCGTCACGAGCAGCAGCGTTCAAG  Raphanus raphanistrum subsp. landra

               601    -    651
UN17715        --> TTAGCAGAGGAGGTGATAGTCTTGAGTTCGGTTTTGAAGTTGTTGAGATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX773227       <-- TTAGCAGAGGAGGTGATAGTCTTGAGTTCGGTTTTGAAGTTGTTGAGATC  Raphanus raphanistrum subsp. landra
EY914019       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV570044       <-- TTAGCAGAGGAGGTGATAGTCTTGAGTTCGGTTTTGAAGTTGTTGAGATC  Raphanus raphanistrum subsp. landra
EV569850       <-- TTAGCAGAGGAGGTGATAGTCTTGAGTTCGGTTTTGAAGTTGTTGAGATC  Raphanus raphanistrum subsp. landra
EV569298       <-- TTAGCAGAGGAGGTGATAGTCTTGAGTTCGGTTTTGAAGTTGTTGAGGTC  Raphanus raphanistrum subsp. landra
EW723764       <-- TTGGCAGAGGAGGTGATAGTCTTGAGTTCGGTTTTGAAGTTGTTGAGATC  Raphanus sativus cv Early Scarlet Globe
EY931732       <-- ..................................................  Raphanus sativus var. oleiformis
FD532684       <-- TTAGCAGAGGAGGTGATAGTCTTGAGTTCGGTTTTGAAGTTGTTGAGATC  Raphanus raphanistrum subsp. maritimus
EY939433       <-- TTGGCAGAGGAGGTGATAGTCTTGAGTTCGGTTTTGAAGTTGTTGAGATC  Raphanus sativus cv Early Scarlet Globe
FD987766       <-- TTAGCAGAGGAGGTGATAGTCTTGAGTTCGGTTTTGAAGTTGTTGAGATC  Raphanus raphanistrum subsp. landra
EY937805       <-- TTGGCAGAGGAGGTGATAGTCTTGAGTTCGGTTTTGAAGTTGTTGAGATC  Raphanus sativus cv Early Scarlet Globe
FD568534       <-- TTGGCAGAGGAGGTGATAGTCTTGAGTTCGGTTTTGAAGTTGTTGAGATC  Raphanus sativus cv Early Scarlet Globe
EW728272       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EW727180       --> TTGGCAGAGGAGGTGATAGTCTTGAGTTCGGTTTTGAAGTTGTTGAGATC  Raphanus sativus cv Early Scarlet Globe
EW727482       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD572863       --> TTGGCAGAGGAGGTGATAGTCTTGAGTTCGGTTTTGAAGTTGTTGAGATC  Raphanus sativus cv Early Scarlet Globe
FD529078       --> TTAGCAGAGGAGGTG...................................  Raphanus raphanistrum subsp. maritimus
FD547740       --> TTGGCAGAGGAGGTGATGGTCTTGAGTTCGGTTTTGAAGTTGTTGAGATC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX777050       --> TTAGCAGAGGAGGTGATAGTCTTGAGTTCGGTTTTGAAGTTGTTGAGATC  Raphanus raphanistrum subsp. landra
EY910146       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD983749       --> TTAGCAGAGGAGGTGATAGTCTTGAGTTCGGTTTTGAAGTTGTTGAGATC  Raphanus raphanistrum subsp. landra
EV574295       --> TTAGCAGAGGAGGTGATAGTCTTGAGTTCGGTTTTGAAGTTGTTGAGATC  Raphanus raphanistrum subsp. landra
EV574439       --> TTAGCAGAGGAGGTGATAGTCTTGAGTTCGGTTTTGAAGTTGTTGAGATC  Raphanus raphanistrum subsp. landra
EV573791       --> TTAGCAGAGGAGGTGATAGTCTTGAGTTCGGTTTTGAAGTTGTTGAGATC  Raphanus raphanistrum subsp. landra

               651    -    701
UN17715        --> AGACTTGAACTCTCTTAATTTGACAAGGAGGGTGGTCTTAACGCTCGGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX773227       <-- AGACTTGAACTCTCTTAATTTGACAAGGAGGGTGc...............
EY914019       <-- ..................................................
EV570044       <-- AGACTTGAACTCTCTTAATTTGACAAGGAGGGTGGTCTTAACGCTCGGTG
EV569850       <-- AGACTTGAACTCTCTTAATTTGACAAGGAGGGTGGTCTTAACGCTCGGTG
EV569298       <-- AGACTTGAACTCTCTTAATTTGACAAGGAGGGTGGTCTTAACGCTCGGTG
EW723764       <-- AGACTTGAACTCTCTTAATTTGACAAGGAGGGTGGTCTTAACGCTCGGTG
EY931732       <-- ..................................................
FD532684       <-- AGACTTGAACTCTCTTAATTTGACAAGGAGGGTGGTCTTAACGCTCGGTG
EY939433       <-- AGACTTGAACTCTCTTAATTTGACAAGGAGGGTGGTCTTAACGCTCGGTG
FD987766       <-- AGACTTGAACTCTCTTAATTTGACAAGGAGGGTGGTCTTAACGCTCGGTG
EY937805       <-- AGACTTGAACTCTCTTAATTTGACAAGGAGGGTGGTCTTAACGCTCGGTG
FD568534       <-- AGACTTGAACTCTCTTAATTTGACAAGGAGGGTGGTCTTAACGCTCGGTG
EW728272       --> ..................................................
EW727180       --> AGACTTGAACTCTCTTAATTTGACAAGGAGGGTGGTCTTAACGCTCGGTG
EW727482       --> ..................................................
FD572863       --> AGACTTGAACTCTCTTAATTTGACAAGGAGGGTGGTCTTAACGCTCGGTG
FD529078       --> ..................................................
FD547740       --> AGACTTGAACTCTCTTAATTTGACAAGGAGGGTGGTCTTAACGCTCGGTG
EX777050       --> AGACTTGAACTCTCTTAATTTGACAAGGAGGGTGc...............
EY910146       --> ..................................................
FD983749       --> AGACTTGAACTCTCTTAATTTGACAAGGAGGGTGGTCTTAACGCTCGGT.
EV574295       --> AGACTTGAACTCTCTTAATTTGACAAGGAGGGTGGTCTTAACGCTCGGTG
EV574439       --> AGACTTGAACTCTCTTAATTTGACAAGGAGGGTGGTCTTAACGCTCGGTG
EV573791       --> AGACTTGAACTCTCTTAATTTGACAAGGAGGGTGGTCTTAACGCTCGGTG

               701    -    751
UN17715        --> GGAGGCTCCTCGCCTCAACATCCATTTTCCTAATCAAAGCTTCAGCATTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX773227       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY914019       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV570044       <-- GGAGGCTCCTCGCCTCAACATCCATTTTCCTAATCAAAGCTTCAGCATTA  Raphanus raphanistrum subsp. landra
EV569850       <-- GGAGGCTCCTCGCCTCAACATCCATTTTCCTAATCAAAGCTTCAGCATTA  Raphanus raphanistrum subsp. landra
EV569298       <-- GGAGGCTCCTCGCCTCAACATCCATTTTCCTAATCAAAGCTTCAGCATTA  Raphanus raphanistrum subsp. landra
EW723764       <-- GGAGGCTCCTGGCCTCAACATCCATTTTCCTAATCAAAGCTTCAGCATTA  Raphanus sativus cv Early Scarlet Globe
EY931732       <-- ..................................................  Raphanus sativus var. oleiformis
FD532684       <-- GGAGGCTCCTCGCCTCAACATCCATTTTCCTAATCAAAGCTTCAGCATTA  Raphanus raphanistrum subsp. maritimus
EY939433       <-- GGAGGCTCCTGGCCTCAACATCCATTTTCCTAATCAAAGCTTCAGCATTA  Raphanus sativus cv Early Scarlet Globe
FD987766       <-- GGAGGCTCCTCGCCTCAACATCCATTTTCCTAATCAAAGCTTCAGCATTA  Raphanus raphanistrum subsp. landra
EY937805       <-- GGAGGCTCCTGGCCTCAACATCCATTTTCCTAATCAAAGCTTCAGCATTA  Raphanus sativus cv Early Scarlet Globe
FD568534       <-- GGAGGCTCCTGGCCTCAACATCCATTTTCCTAATCAAAGCTTCAGCATTA  Raphanus sativus cv Early Scarlet Globe
EW728272       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EW727180       --> GGAGGCTCCTGGCCTCAACATCCATTTTCCTAATCAAAGCTTCAGCATTA  Raphanus sativus cv Early Scarlet Globe
EW727482       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD572863       --> GGAGGCTCCTGGCCTCAACATCCATTTTCCTAATCAAAGCTTCAGCATTA  Raphanus sativus cv Early Scarlet Globe
FD529078       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD547740       --> G-AGGCTCCTCGCCTCAACATCCATTTTCCTAATCAAAGCTTCAGCATTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX777050       --> ..................................................  Raphanus raphanistrum subsp. landra
EY910146       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD983749       --> ..................................................  Raphanus raphanistrum subsp. landra
EV574295       --> GGAGGCTCCTCGCCTCAACATCCATTTTCCTAATCAAAGCTTCAGCATTA  Raphanus raphanistrum subsp. landra
EV574439       --> GGAGGCTCCTCGCCTCAACATCCATTTTCCTAATCAAAGCTTCAGCATTA  Raphanus raphanistrum subsp. landra
EV573791       --> GGAGGCTCCTCGCCTCAACATCCATTTTACTAATCAAAGCTTCAGCATTA  Raphanus raphanistrum subsp. landra

               751    -    801
UN17715        --> TCGAGGCCAGACCTTATTTCAGAGAGCTTCTGCTTCTTTTGCTCTC-CGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX773227       <-- ..................................................
EY914019       <-- ..................................................
EV570044       <-- TCGAGGCCAGACCTTATTTCAGAGAGCTTCTGCTTCTTTTGCTCTC-CGT
EV569850       <-- TCGAGGCCAGACCTTATTTCAGAGAGCTTCTGCTTCTTTTGCTCTC-CGT
EV569298       <-- TCGAGGCCAGACCTTATTTCAGAGAGCTTCTGCTTCTTTTGTTCTC-CGT
EW723764       <-- TCGAGGCCAGACCTTATTTCAGGGAGCTTCTGCTTCTTTTGTTCTC-CGT
EY931732       <-- ..................................................
FD532684       <-- TCGAGGCCAGACCTTATTTCAGAGAGCTTCTGCTTCTTTTGCTCTC-CGT
EY939433       <-- TCGAGGCCAGACCTTATTTCAGAGAGCTTCTGCTTCTTTTGTTCTC-CGT
FD987766       <-- TCGAGGCCAGACCTTATTTCAGAGAGCTTCTGCTTCTTTTGCTCTC-CGT
EY937805       <-- TCGAGGCCAGACCTTATTTCAGAGAGCTTCTGCTTCTTTTGTTCTC-CGT
FD568534       <-- TCGAGGCCAGACCTAATTTCAGAGAGCTTCTGCTTCTTTTGTTCTC-CGT
EW728272       --> ..................................................
EW727180       --> TCGAGGCCAGACCTTATTTCAGAGAGCTTCTGCTTCTTTTGTTCTCTCGT
EW727482       --> ..................................................
FD572863       --> TCGAGGCCAGACCTAATTTCAGAGAGCTTCTGCTTCTTTT..........
FD529078       --> ..................................................
FD547740       --> TCGA..............................................
EX777050       --> ..................................................
EY910146       --> ..................................................
FD983749       --> ..................................................
EV574295       --> TCGAGGCCAGACCTTATTTCAGAGAGCTTCTGCTTCTTTTGCTCTC-CGT
EV574439       --> TCGAGGCCAGACCTTATTTCAGAGAGCTTCTGCTTCTTTTGCTCTC-CGT
EV573791       --> TCGAGGCCAGACCTTATTTCAGAGAGCTTCTGCTTCTTTTGCTCTC-CGT

               801    -    851
UN17715        --> GGAGGGAAATAGCAGAGGAGCATTTCTTGGAAAGATGGGCGGAGAGGTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX773227       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY914019       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV570044       <-- GGAGGGAAATAGCAGAGGAGCATTTCTTGGAAAGATGGGCGGAGAGGTCG  Raphanus raphanistrum subsp. landra
EV569850       <-- GGAGGGAAATAGCAGAGGAGCATTTCTTGGAAAGATGGGCGGAGAGGTCG  Raphanus raphanistrum subsp. landra
EV569298       <-- GGAGGGAAATAGCAGAGGAGCATTTCTTGGAAAGATGGGCGGAGAGGTCG  Raphanus raphanistrum subsp. landra
EW723764       <-- GGAGGGCAATAGCAGAGGAGCATTTCTTGGAAAGATGGGCGGAGAGGTCG  Raphanus sativus cv Early Scarlet Globe
EY931732       <-- ..................................................  Raphanus sativus var. oleiformis
FD532684       <-- GGAGGGAAATAGCAGAGGAGCATTTCTTGGAAAGATGGGCGGAGAGGTCG  Raphanus raphanistrum subsp. maritimus
EY939433       <-- GGAGGGCAATAGCAGAGGAGCATTTCTTGGAAAGATGGGCGGAGAGGTCG  Raphanus sativus cv Early Scarlet Globe
FD987766       <-- GGAGGGAAATAGCAGAGGAGCATTTCTTGGAAAGATGGGCGGAGAGGTCG  Raphanus raphanistrum subsp. landra
EY937805       <-- GGAGGGCAATAGCAGAGGAGCATTTCTTGGAAAGATGGGCGGAGAGGTCG  Raphanus sativus cv Early Scarlet Globe
FD568534       <-- GGAGGGCAATAGCAGAGGAGCATTTCTTGGAAAGATGGGCGGAGAGGTCG  Raphanus sativus cv Early Scarlet Globe
EW728272       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EW727180       --> GGAGGGCAATAGCAGAGGAGCATTTCTTGGAAAGATGGGCGGAGAGGTCG  Raphanus sativus cv Early Scarlet Globe
EW727482       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD572863       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD529078       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD547740       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX777050       --> ..................................................  Raphanus raphanistrum subsp. landra
EY910146       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD983749       --> ..................................................  Raphanus raphanistrum subsp. landra
EV574295       --> GGAGGGAAATAGCAGAGGAGCATTTCTTGGAAAGATGGGCGGAGAGGTCG  Raphanus raphanistrum subsp. landra
EV574439       --> GGAGGGAAATAGCAGAGGAGCATTTCTTGGAAAGATGGGCGGAGAGGTCG  Raphanus raphanistrum subsp. landra
EV573791       --> GGAGGGAAATAGCAGAGGAGCATTTCTTGGAAAGATGGGCGGAGAGGTCG  Raphanus raphanistrum subsp. landra

               851    -    901
UN17715        --> CAGTATTGGCGCTCGTATCCGTTAAACACCTCACTCATTCTGATTGATTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX773227       <-- ..................................................
EY914019       <-- ..................................................
EV570044       <-- CAGTATTGGCGCTCGTATCCGTTAAACACCTCACTCATTCTGATTGATTG
EV569850       <-- CAGTATTGGCGCTCGTATCCGTTAAACACCTCACTCATTCTGATTGATTG
EV569298       <-- CAGTATTGGCGCTCGTATCCGTTAAACACCTCACTCATTCTGATTGATTG
EW723764       <-- CAGTATTGGCGCTCGTATCCGTTAAACACCTCACTCATTCTGATTGATTG
EY931732       <-- ..................................................
FD532684       <-- CAGTATTGGCGCTCGTATCCGTTAAACACCTCACTCATTCTGATTGATTG
EY939433       <-- CAGTATTGGCGCTCGTATCCGTTAAACACCTCACTCATTCTGATTGATTG
FD987766       <-- CAGTATTGGCGCTCGTATCCGTTAAACACCTCACTCATTCTGATTGATTG
EY937805       <-- CAGTATTGGCGCTCGTATCCGTTAAACACCTCACTCATTCTGATTGATTG
FD568534       <-- CAGTATTGGCGCTCGTATCCGTTAAACACCTCACTCATTCTGATTGATTG
EW728272       --> ..................................................
EW727180       --> CAGTATTGGCGCTCGTAT................................
EW727482       --> ..................................................
FD572863       --> ..................................................
FD529078       --> ..................................................
FD547740       --> ..................................................
EX777050       --> ..................................................
EY910146       --> ..................................................
FD983749       --> ..................................................
EV574295       --> CAGTATTGGCGCTCGTATCCGTTAAACACCTCACTCATTCTGATTGATTG
EV574439       --> CAGTATTGGCGCTCGTATCCGTTAAACACCTCACTCATTCTGATTGATTG
EV573791       --> CAGTATTGGCGCTCGTATCCGTTAAACACCTCACTCATTCTGATTGATTG

               901    -    951
UN17715        --> ATTGATACTCTCTCTCTCTCTCTTCTGAT-AACACGAAGCACCCTCGGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX773227       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY914019       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV570044       <-- ATTGATACTCTCTCTCTCTCTCTTCTGAT-AACACGAAGCACCCTCGGAA  Raphanus raphanistrum subsp. landra
EV569850       <-- ATTGATACTCTCTCTCTCTCTCTTCTGAT-AACACGAAGCACCCTCGGAA  Raphanus raphanistrum subsp. landra
EV569298       <-- ATTGATACTATCTCTCTCTCTCTTCTGAT-AACACGAAGAACCGTCGGAA  Raphanus raphanistrum subsp. landra
EW723764       <-- ATTGATACTCTCTCTC----TCTTCTGATCAACACGAAGAACCCTCGGAA  Raphanus sativus cv Early Scarlet Globe
EY931732       <-- ..................................................  Raphanus sativus var. oleiformis
FD532684       <-- ATTGATACTCTCTCTCTCTC--TTCTGAT-AACACGAAGCACCCTCGGAA  Raphanus raphanistrum subsp. maritimus
EY939433       <-- ATTGATACTCTCTCTCTCTC--TTCTGATCAACACGAAGAACCCTCGGAA  Raphanus sativus cv Early Scarlet Globe
FD987766       <-- ATTGATACTCTCTCTCTCTCTCTTCTGAT-AACACGAAGCACCCTCGGAA  Raphanus raphanistrum subsp. landra
EY937805       <-- ATTGATACTCTCTCTCTCTCTCTTCTGATCAACACGAAGAACCCTCGGAA  Raphanus sativus cv Early Scarlet Globe
FD568534       <-- ATTGATACTCTCTCTCTCTCTCTTCTGATCAACACGAAGAACCCTCGGAA  Raphanus sativus cv Early Scarlet Globe
EW728272       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EW727180       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EW727482       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD572863       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD529078       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD547740       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX777050       --> ..................................................  Raphanus raphanistrum subsp. landra
EY910146       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD983749       --> ..................................................  Raphanus raphanistrum subsp. landra
EV574295       --> ATTGATACTCTCTCTCTCTCTCTTCTGAT-AACACGAA............  Raphanus raphanistrum subsp. landra
EV574439       --> ATTGATACTCTCTCTCTCTCT.............................  Raphanus raphanistrum subsp. landra
EV573791       --> ATTGATACTCTCTCTCTCTCT--TCTGAT-AACACGAAGCACCCTCGGAA  Raphanus raphanistrum subsp. landra

               951    -   1001
UN17715        --> TCGGAAGATAGAGA--TCCAAAGGTAA-----GGTAAGGAAAGACGACGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX773227       <-- ..................................................
EY914019       <-- ..................................................
EV570044       <-- TCGGAAGATAGAGAgatccaaaagtcc.......................
EV569850       <-- TCGGAAGATAGAGAgatccaaaagtcc.......................
EV569298       <-- TCGGAAGATAGAGAGATCCAAAGGTAAAGAAAGGTAAGGAAAGACGACGG
EW723764       <-- TCGGAAGATAGAGA--TCCAAAGGTAA-----GGTAAGGAAAGACGACGG
EY931732       <-- ..................................................
FD532684       <-- TCGGAAGATAGAGAGATCCAAAAGTAA-----AGAAAGGAAAGACGACGG
EY939433       <-- TCGGAAGATAGAGA--TCCAAAGGTAA-----GGTAAGGAAAGACGACGG
FD987766       <-- TCGGAAGATAGAGAgatccaa.............................
EY937805       <-- TCGGAAGATAGAGA--TCCAAAGGTAA-----GGTAAGGAAAGACGACGG
FD568534       <-- TCGGAAGATAGAGA--TCCAAAGGTAA-----GGTAAGGAAAGACGACGG
EW728272       --> ..................................................
EW727180       --> ..................................................
EW727482       --> ..................................................
FD572863       --> ..................................................
FD529078       --> ..................................................
FD547740       --> ..................................................
EX777050       --> ..................................................
EY910146       --> ..................................................
FD983749       --> ..................................................
EV574295       --> ..................................................
EV574439       --> ..................................................
EV573791       --> TCGGAAGATAGAGAga..................................

               1001   -   1051
UN17715        --> CGATGAATTTGTTGATGGATTGAATGTTATTATTATTTTTATTTTTCTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX773227       <-- ..................................................
EY914019       <-- ..................................................
EV570044       <-- ..................................................
EV569850       <-- ..................................................
EV569298       <-- CGATcc............................................
EW723764       <-- CGATGAATTTGTTGATGGATTGAAT.........................
EY931732       <-- ..................................................
FD532684       <-- Ccc...............................................
EY939433       <-- Ccc...............................................
FD987766       <-- ..................................................
EY937805       <-- CGATGAATTTGTTGATGGATTGAATGTTATTATTATcc............
FD568534       <-- CGATGTATTTGTTGATGGATTGAATGTTATTATTATTTTTATTTTTCTTT
EW728272       --> ..................................................
EW727180       --> ..................................................
EW727482       --> ..................................................
FD572863       --> ..................................................
FD529078       --> ..................................................
FD547740       --> ..................................................
EX777050       --> ..................................................
EY910146       --> ..................................................
FD983749       --> ..................................................
EV574295       --> ..................................................
EV574439       --> ..................................................
EV573791       --> ..................................................

               1051   -   1101
UN17715        --> CTGGGGATGGTCGGAAAT..
                   ~~~~~~~~~~~~~~~~~~~~
EX773227       <-- ....................
EY914019       <-- ....................
EV570044       <-- ....................
EV569850       <-- ....................
EV569298       <-- ....................
EW723764       <-- ....................
EY931732       <-- ....................
FD532684       <-- ....................
EY939433       <-- ....................
FD987766       <-- ....................
EY937805       <-- ....................
FD568534       <-- CTGGGGATGGTCGGAAATcc
EW728272       --> ....................
EW727180       --> ....................
EW727482       --> ....................
FD572863       --> ....................
FD529078       --> ....................
FD547740       --> ....................
EX777050       --> ....................
EY910146       --> ....................
FD983749       --> ....................
EV574295       --> ....................
EV574439       --> ....................
EV573791       --> ....................