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Alignment for radish unigene UN17742

               1      -     51
UN17742        --> ACAGCATCACTCAAGTCTCAGTTAAGCAAAGATAAAATCAAAGTTTGCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY938479       <-- ..................................................
FD549160       <-- ..................................................
FD557534       <-- ..................................................
EY946150       <-- ..................................................
FD946986       <-- ..................................................
FD553620       --> ACAGCATCACTCAAGTCTCAGTTAAGCAAAGATAAAATCAAAGTTTGCCA
EY942301       --> ..................................................
FD943004       --> ..................................................
FD545245       --> ..................................................
EY903552       --> ..................................................
EV574595       --> ..................................................
EV574668       --> ..................................................

               51     -    101
UN17742        --> CAAAGTATCTTAAAAGATCTTTTAACTCAATGCGAAAGACTAATAAAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY938479       <-- ..................................................
FD549160       <-- ..................................................
FD557534       <-- ..................................................
EY946150       <-- ..................................................
FD946986       <-- ..................................................
FD553620       --> CAAAGTATCTTAAAAGATCTTTTAACTCAATACGAAAGACTAATAAAAAG
EY942301       --> ......ATCTTAAAAGATCTTTTAACTCAACGTGAAAGACTAATAAGAAG
FD943004       --> ......ATCTTAAAAGATCTTTTAACTCAACGTGAAAGACTAATAAGAAG
FD545245       --> ......acCTTAAAAGATCTTTTAACTCAATACGAAAGACTAATAAAAAG
EY903552       --> ........................ACTGAATGCGAAAGACTAATAAGAAG
EV574595       --> .......................................gTAATAAAAAG
EV574668       --> .......................................gTAATAAAAAG

               101    -    151
UN17742        --> AGAGTTGCATACAACAAAGAAGCTTTGTTTGGATATGGATAGAGATAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY938479       <-- ..................................................
FD549160       <-- ..................................................
FD557534       <-- ..................................................
EY946150       <-- ..................................................
FD946986       <-- ..................................................
FD553620       --> AGAGTTGCATACAACAAAGAAGCTTTGTTTGGATATGGATAGAGATAGAA
EY942301       --> AGAGTTGCATACAAGAAAGGAGCTTTGTTTGGATATGGATAGAGATAGAA
FD943004       --> AGAGTTGCATACAAGAAAGGAGCTTTGTTTGGATATGGATAGAGATAGAA
FD545245       --> AGAGTTGCATACAACAAAGAAGCTTTGTTTGGATATGGATAGGGATAGGA
EY903552       --> AGAGTTGCATACAACAAAGAAGCTTTGTTTGGGTATGGATAGAGATAGAA
EV574595       --> AGAGTTGCATACAACAAAGAAGCTTTGTTTGGATATGGATAGAGATAGAA
EV574668       --> AGAGTTGCATACAACAAAGAAGCTTTGTTTGGATATGGATAGAGATAGAA

               151    -    201
UN17742        --> AGTTGGAAGACAAATGTGAAGAAGATAATAAGCTTAAACAAGAATCATTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY938479       <-- ..................................................
FD549160       <-- ..................................................
FD557534       <-- ..................................................
EY946150       <-- ..................................................
FD946986       <-- ..................................................
FD553620       --> AGTTGGAAGACAAATGTGAAGAAGATAATAAGCCTAAACAAGAATCATTC
EY942301       --> AGTTGGAAGACAAATGTGAAGAAGATAATAAGCTTAAACAAGAATCATTC
FD943004       --> AGTTGGAAGACAAGTGTGAAGAAGATAATAAGCTTAAACAAGAATCATTC
FD545245       --> AGTTGGAAGACAAATGTGAAGAAAATAATAAGCTTAAACAAGAATCATTC
EY903552       --> AGTTGGAAGCCAAGTGTGAAGAAGATAATAAGCTTAAACAAGAATCATTC
EV574595       --> AGTTGGAAGACAAATGTGAAGAAGATAATAAGCTTAAACAAGAATCATTC
EV574668       --> AGTTGGAAGACAAATGTGAAGAAGATAATAAGCTTAAACAAGAATCATTC

               201    -    251
UN17742        --> ATTCATTCACCTTTGATGTTATTATCATTCTCTACAACAGCATCATCACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY938479       <-- ..................................................
FD549160       <-- ..................................................
FD557534       <-- ..................................................
EY946150       <-- ..................................................
FD946986       <-- ..................................................
FD553620       --> ATTCATTCACCTTTGATGTTATTATCATTCTCTACAACAGCATCATCACT
EY942301       --> ATTCATTCACCTTTGATGTTATTATCATTCTCTACAACAGCATCA---CT
FD943004       --> ATTCATTCACCTTTGATGTTATTATCATTCTCTACAACAGCATCA---CT
FD545245       --> ATTCATTCACCTTTGATGTTATTATCATTCTCTACAACAGCATCATCACT
EY903552       --> ATTCATTCACCTTTGATGTTATTATCATTCTCTACAACAGCATCA---CT
EV574595       --> ATTCATTCACCTTTGATGTTATTATCATTCTCTACAACAGCATCATCACT
EV574668       --> ATTCATTCACCTTTGATGTTATTATCATTCTCTACAACAGCATCATCACT

               251    -    301
UN17742        --> TGGAAGATCAATCCCCTTTGGAATCTTCCCTGGATAATCAGTCACTGATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY938479       <-- ..................................TAATCAGTCACTGATT
FD549160       <-- ..................................................
FD557534       <-- ..................................................
EY946150       <-- ..................................................
FD946986       <-- ..................................................
FD553620       --> TAAAAGATCAATCCCCTTTGGAATCTTCCCTGGATAATCAGTCACTGATT
EY942301       --> TGGAAGATCAATCCCCTTTGGAATCTTCCCTGGATAATCAGTCACTGATT
FD943004       --> TGGAAGATCAATCCCCTTTGGAATCTTCCCTGGATAATCAGTCACTGATT
FD545245       --> TGGAAGATCAATCCCCTTTGGAATCTTCCCTGGATAATCAGTCACTGATT
EY903552       --> TGGAAGATCAATCCCCTTTGGAATCTTCCCTGGATAATCAGTCACTGATT
EV574595       --> TGGAAGATCAATCCCCTTTGGAATCTTCCCTGGATAATCAGTCACTGATT
EV574668       --> TGGAAGATCAATCCCCTTTGGAATCTTCCCTGGATAATCAGTCACTGATT

               301    -    351
UN17742        --> TGTCCGATCCTAACATACTTCTATCAACGATGACCATTGAGCGTAGCTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY938479       <-- TGTCCGATCCTAACATACTTCTATCAACGATGACCATTGAACGTAGCTCG  Raphanus sativus cv Early Scarlet Globe
FD549160       <-- ......................ATCAACGATGACCAT-GAGCGTAGCTCG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD557534       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY946150       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD946986       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD553620       --> TGTCCGATCCTAACATACTTCTATCAACGACGACCATTGAGCGTAGCTCG  Raphanus raphanistrum subsp. landra
EY942301       --> TGTCCGATCCTAACATACTTCTATCAACGATGACCATTGAACGTAGCTCG  Raphanus sativus cv Rat-Tail Radish #3870
FD943004       --> TGTCCGATCCTAACATACTTCTATCAACGATGACCATTGAACGTAGCTCG  Raphanus sativus cv Early Scarlet Globe
FD545245       --> TGTCCGATCCTAACATACTTCTATCAACGATGACCATTGAGCGTAGCTCG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY903552       --> TGTCCGATCCTAACATACTTCTATCAACGATGACCATTGAACGTAGCTCG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV574595       --> TGTCCGATCCTAACATACTTCTATCAACGATGACCATTGAGCGTAGCTCG  Raphanus raphanistrum subsp. landra
EV574668       --> TGTCCGATCCTAACATACTTCTATCAACGATGACCATTGAGCGTAGCTCG  Raphanus raphanistrum subsp. landra

               351    -    401
UN17742        --> CAATTCGCAAAGTGGCTGCAAATCTCCTTCTTAACATCTGGATGGCACTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY938479       <-- CAATTCGCAAAGTGGCTGCAAATCTCGTTCTTAACATCTGGATGGCACTC
FD549160       <-- CAAT-CGCAAAGTGGCTGCAAATCTC-TTCTTAACATCTG-ATGGCACTC
FD557534       <-- ................................AACATCTGGATGGCACTC
EY946150       <-- ..................................................
FD946986       <-- ..................................................
FD553620       --> CAATTCGCAAAGTGGCTGCAAATCTCCTTCTTAACATCTGGATGGCACTC
EY942301       --> CAATTCGCAAAGTGGCTGCAAATCTCCTTCTTAACATCTGGATGGCACTC
FD943004       --> CAATTCGCAAAGTGGCTGCAAATCTCCTTCTTAACATCTGGATGGCACTC
FD545245       --> CAATTCGCAAAGTGGCTGCAAATCTCCTTCTTAACATCTGGATGGCACTC
EY903552       --> CAATTAGCAAAGTGGCTGCAAATCTCCTTCTTAACATCTGGATGGCACTC
EV574595       --> CAATTCGCAAAGTGGCTGCAAATCTCCTTCTTAACATCTGGATGGCACTC
EV574668       --> CAATTCGCAAAGTGGCTGCAAATCTCCTTCTTAACATCTGGATGGCACTC

               401    -    451
UN17742        --> ACTCTGTAGAGCGTTCAGCGTGTGAAACAAGAAACCACTGTGTGTCACAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY938479       <-- ACTCTGTAGAGCGTTCAGCGTGTGAAACAAGAAACCACTGTGTGTCACAA
FD549160       <-- A-TCTGTAGAGC-ATCAGCGTGTGAAACAAGAAGCCACTGTGTGTCACAA
FD557534       <-- ACTCTGTAGAGCGTTCAGCGTGTGAAACAAGAAACCACTGTGTGTCGCAA
EY946150       <-- ..................................................
FD946986       <-- ..................................................
FD553620       --> ACTCTGTAGAGCGTTCAGCGTGTGAAACAAGAAACCACTGTGTGTCGCAA
EY942301       --> ACTCTGTAGAGCGTTCAGCGTGTGAAACAAGAAACCACTGTGTGTCACAA
FD943004       --> ACTCTGTAGAGCGTTCAGCGTGTGAAACAAGAAACCACTGTGTGTCACAA
FD545245       --> ATTCTGTAAAGCATTCAGCGTGTGAAACAAGAAGCCACTGTGTGTCACAA
EY903552       --> ACTCTGTAGAGCATTCAGCGTGTGAAACAAGAAACCACTGTGTGTCACAA
EV574595       --> ACTCTGTAGAGCGTTCAGCGTGTGAAACAAGAAACCACTGTGTGTCACAA
EV574668       --> ACTCTGTAGAGCGTTCAGCGTGTGAAACAAGAAACCACTGTGTGTCACAA

               451    -    501
UN17742        --> TCGCTATCTCTTTTTCTTTCCTTGTCCATAGCCAGTTGAGGAACTTTTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY938479       <-- TCGCTATCTCTTTTTCTTTCCTTGTCCATAGCCAGTTGAGGAACTTTTTG
FD549160       <-- TCGCTATCTCTTTT-CTTTC-TTGTCCATAGCCAGTTGAGGAACTTTTTG
FD557534       <-- TCGCTATCTCTTTTTCTTTCCTTGTCCATAGCCAGTTGAGGAACTTTTTG
EY946150       <-- ............tttttattCTTGTCCATAGCCAGTTGAGGAACTTTTTG
FD946986       <-- ............................................TTTTTG
FD553620       --> TCGCTATCTCTTTTTCTTTCCTTGTCCATAGCCAGTTGAGGAACTTTTTG
EY942301       --> TCGCTATCTCTTTTT-ATTCCTTGTCCATAGCCAGTTGAGGAACTTTTTG
FD943004       --> TCGCTATCTCTTTTTCTTTCCTTGTCCATAGCCAGTTGAGGAACTTTTTG
FD545245       --> TCGCTATCTCTTTTTCTTTCCTTGTCCATAGCCAGTTGAGGAACTTTTTG
EY903552       --> TCGCTATCTCTTTTTCTTTCCTTGTCCATAGCCAGTTGAGGAACTTTTTG
EV574595       --> TCGCTATCTCTTTTTCTTTCCTTGTCCATAGCCAGTTGAGGAACTTTTTG
EV574668       --> TCGCTATCTCTTTTTCTTTCCTTGTCCATAGCCAGTTGAGGAACTTTTTG

               501    -    551
UN17742        --> CCTCTAGCCGCAAGTTCTTCGATTGTTTCTCTAACGTCAGC-CTTCCATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY938479       <-- CCTCTAGCCGCAAGTTCTTCGATTGTTTCTCTAACGTCAGC-CTTCCATA
FD549160       <-- CCTCTAGCCGCAAGTTCTTCGATTGTTTCTCTAACGTCAGC-CTTCCATA
FD557534       <-- CCTCTAGCTGCAAGTTCTTCGATTGTTTCTCTAACGTCAGCTCTTCCATA
EY946150       <-- CCTCTAGCCGCAAGTTCTTCGATTGTTTCTCTAACGTCAGC-CTTCCATA
FD946986       <-- CCTCTAGCCGCAAGTTCTTCGATTGTTTCTCTAACGTCAGT-CTTCCATA
FD553620       --> CCTCTAGCTGCAAGTTCTTCGATTGTTTCTCTAACGTCAGC-CTTCCATA
EY942301       --> CCTCTAGCCGCAAGTTCTTCGATTGTTTCTCTAACGTCAGC-CTTCCATA
FD943004       --> CCTCTAGCCGCAAGTTCTTCGATTGTTTCTCTAACGTCAGT-CTTCCATA
FD545245       --> CCTCTAGCCGCAAGTTCTTCGATTGTTTCTCTAACGTCAGC-CTTCCATA
EY903552       --> CCTCTAGCTGCAAGTTCTTCGATTGTTTCTCTAACGTCAGC-CTTCCATA
EV574595       --> CCTCTAGCCGCAAGTTCTTCGATTGTTTCTCTAACGTCAGC-CTTCCATA
EV574668       --> CCTCTAGCCGCAAGTTCTTCGATTGTTTCTCTAACGTCAGC-CTTCCATA

               551    -    601
UN17742        --> ACTTATCTTCATCGCTTTCTATCAGTGAAAAATCAACAGCGGGGAAAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY938479       <-- ACTTATCTTCATCGCTTTCTATCAGTGAAAAATCAACAGCGGGGAAAAGA  Raphanus sativus cv Early Scarlet Globe
FD549160       <-- AATTATCTTCATCGCTTTCTATCAGTGAAAAATCAACAGCGGGGAAAAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD557534       <-- ACTTGTCTTCATCGCTTTCTATCAGTGAAAAATCAACAGCGGGGAAAAGA  Raphanus raphanistrum subsp. landra
EY946150       <-- ACTTATCTTCATCGCTTTCTATCAGTGAAAAATCAACAGCGGGGAAAAGA  Raphanus sativus cv Rat-Tail Radish #3870
FD946986       <-- ACTTATCTTCATCGCTTTCTATCAGTGAAAAATCAACAGCGGGGAAAAGA  Raphanus sativus cv Early Scarlet Globe
FD553620       --> ACTTGTCTTCATCGCTTTCTATCAGTGAAAAATCAACAGCGGGGAAAAGA  Raphanus raphanistrum subsp. landra
EY942301       --> ACTTATCTTCATCGCTTTCTATCAGTGAAAAATCAACAGCGGGGAAAAGA  Raphanus sativus cv Rat-Tail Radish #3870
FD943004       --> ACTTATCTTCATCGCTTTCTATCAGTGAAAAATCAACAGCGGGGAAAAGA  Raphanus sativus cv Early Scarlet Globe
FD545245       --> AATTATCTTCATCGCTTTCTATCAGTGAAAAATCAACAGCGGGGAAAAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY903552       --> ACTTATCTTCATCGCTTTCTATCAGCGAAAAATCAACTGCGGGGAAAAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV574595       --> ACTCGTCTTCATCGCTTTCTATCAGTGAAAAATCAACAGCGGGGAAAAGA  Raphanus raphanistrum subsp. landra
EV574668       --> ACTCGTCTTCATCGCTTTCTATCAGTGAAAAATCAACAGCGGGGAAAAGA  Raphanus raphanistrum subsp. landra

               601    -    651
UN17742        --> AACTGATAGTCGCTGATGCTTCTTCTCTGATCGCATGGATGCACTCCCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY938479       <-- A-CTGATAGTCGCTGATGCTTCTTCTCTGATCGCATGGATGCACTCCCAA
FD549160       <-- AACTGATAGTCGCTGATGCTTCTTCTCTGATCGCATGGATGCACTCCCAA
FD557534       <-- AACTGATAGTCGCTGATGCTTCTTCTCTGATCGCATGGATGCACTCCCAA
EY946150       <-- AACTGATAGTCGCTGATGCTTCTTCTCTGATCGCATGGATGCACTCCCAA
FD946986       <-- AACTGATAGTCGCTGATGCTTCTTCTCTGATCGCATGGATGCACTCCCAA
FD553620       --> AACTGATAGTCGCTGATGCTTCTTCTCTGATCGCATGGATGCACTCCCAA
EY942301       --> AACTGATAGTCGCTGATGCTTCTTCTCTGATCGCATGGATGCACTCCCAA
FD943004       --> AACTGATAGTCGCTGATGCTTCTTCTCTGATCGCATGGATGCACTCCCAA
FD545245       --> AACTGATAGTCGCTGATGCTTCTTCTCTGATCGCATGGATGCACTCCCAA
EY903552       --> AACTGATAGTCGCTGATGCTTCTTCTCTGATCGCATGGATGCACTCCCAA
EV574595       --> AACTGATAGTCGCTGATGCTTCTTCTCTGATCGCATGGATGCACTCCCAA
EV574668       --> AACTGATAGTCGCTGATGCTTCTTCTCTGATCGCATGGATGCACTCCCAA

               651    -    701
UN17742        --> ATGTTCTCTGCAGGACTCCTCTGTGATAATTGGTGGGCAGTTTGAACTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY938479       <-- ATGTTCTCTGCAGGACTCCTCTGTGATAATTGGTGGGCAGTTTGAACTGG
FD549160       <-- ATGTTCTCTGCAGGACTCCTCTGTGATAATTGGCGGGCAGTTTGAACTGG
FD557534       <-- ATGTTCTCTGCAGGACTCCTCTGTGATAATTGGTGGGCAGTTTGAACTGG
EY946150       <-- ATGTTCTCTGCAGGACTCCTCTGTGATAATTGGTGGGCAGTTTGAACTGG
FD946986       <-- ATGTTCTCTGCAGGACTCCTCTGTGATAATTGGTGGGCAGTTTGAACTGG
FD553620       --> ATGTTCTCTGCAGGACTCCTCTGTGATAATTGGTGGGCAGTTTGAACTGG
EY942301       --> ATGTTCTCTGCAGGACTCCTCTGTGATAATTGGTGGGCAGTTTGAACTGG
FD943004       --> ATGTTCTCTGCAGGACTCCTCTGTGATAATTGGTGGGCAGTTTGAACTGG
FD545245       --> ATGTTCTC..........................................
EY903552       --> ATGTTCTCTGCAGGACTCCTCTGTGATAATTGGTGGGCAGTTTGAACTGG
EV574595       --> ATGTTCTCTGCAGGACTCCTCTGTGATAATTGGTGGGCAGTTTGAACTGG
EV574668       --> ATGTTCTCTGCAGGACTCCTCTGTGATAATTGGTGGGCAGTTTGAACTGG

               701    -    751
UN17742        --> ATATAGCTGCACGGTTGCTGTTTCCTGCATTTGCTACCATTAGAGGTAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY938479       <-- ATATAGCTGCACGGTTGCTGTTTCCTGCATTTGCTACCATTAGAGGTAGT
FD549160       <-- ATATAGCTGCACGGTTGCTGTTTCCTGCATTTGCTACCATTAGAGGTAGT
FD557534       <-- ATATAGCTGCACGGTTGCTGTTTCCTGCATTTGCTACCATTAGAGGTAGT
EY946150       <-- ATATAGCTGCACGGTTGCTGTTTCCTGCATTTGCTACCATTAGAGGTAGT
FD946986       <-- ATATAGCTGCACGGTTGCTGTTTCCTGCATTTGCTACCATTAGAGGTAGT
FD553620       --> ATATAGCTG.........................................
EY942301       --> ATATAGCTGCACGGTTGCTGTTTCCTGC......................
FD943004       --> ATATAGCTGCACGGTTGCTGTTTCCTGCATTTGCTACCATTAGAGGTAGT
FD545245       --> ..................................................
EY903552       --> ATATAGCTGCACGGTTGCTGTTTCCTGCATTTGCTACCATTAGAGGTAGT
EV574595       --> ATATAGCTGCACGGTTGCTG..............................
EV574668       --> ATATAGCTGCACGGTTGCTGTTTCCTGCATTTGCTACCATTAGAGGTAGC

               751    -    801
UN17742        --> ACATCGCTCATATCCGTGTAGCCATCTCCACCGAAAACACCGACGGCAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY938479       <-- ACATCGCTCATATCCGTGTAGCCATCTCCACCGAAAACACCGACGGCAGT
FD549160       <-- ACATCGCTCATATCCGTGTAGCCATCTCCACCGAAAACACCGACGGCAGT
FD557534       <-- ACATCGCTCATATCCGTGTAGCCATCTCCACCGAAAACACCGACGGCAGT
EY946150       <-- ACATCGCTCATATCCGTGTAGCCATCTCCACCGAAAACACCGACGGCAGT
FD946986       <-- ACATCGCTCATATCCGTGTAGCCATCTCCACCGAAAACACCGACGGCAGT
FD553620       --> ..................................................
EY942301       --> ..................................................
FD943004       --> ACATCGCTCATATCCGTGTAGCCATCTCCACCGAAAACACCGACGGCAGT
FD545245       --> ..................................................
EY903552       --> ACATCGCTCATATCCGTGTAGCCATCTC......................
EV574595       --> ..................................................
EV574668       --> ACATCGCTCATATCCGTGTAGCCATCTCCACCGAAAACACCGACGGCAGT

               801    -    851
UN17742        --> TTGCATCGTTCTCATGAGTGGAGACGAGATGACCAACTCAATCTTCTTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY938479       <-- TTGCATCGTTCTCATGAGTGGAGACGAGATGACCAACTCAATCTTCTTGT  Raphanus sativus cv Early Scarlet Globe
FD549160       <-- TTGCATTGTTCTCATGAGTGGAGACGAGATGACCAACTCAATCTTCTTGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD557534       <-- TTGCATTGTGCTCATGAGTGGAGACGAGATGACCAACTCAATCTTCTTGT  Raphanus raphanistrum subsp. landra
EY946150       <-- TTGCATCGTTCTCATGAGTGGAGACGAGATGACCAACTCAATCTTCTTGT  Raphanus sativus cv Rat-Tail Radish #3870
FD946986       <-- TTGCATCGTTCTCATGAGTGGAGACGAGATGACCAACTCAATCTTCTTGT  Raphanus sativus cv Early Scarlet Globe
FD553620       --> ..................................................  Raphanus raphanistrum subsp. landra
EY942301       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD943004       --> TTGCATCGTTCTCATGAGTGGAGACGAGATGACCAACTCAATCTTCTTGT  Raphanus sativus cv Early Scarlet Globe
FD545245       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY903552       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV574595       --> ..................................................  Raphanus raphanistrum subsp. landra
EV574668       --> TTGCATTGTTCTCATGAGTGGAG...........................  Raphanus raphanistrum subsp. landra

               851    -    901
UN17742        --> GAAGTCCACTGGAACGAACATGCTTACGCAAATTATCAACCTGTTGCCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY938479       <-- GAAGTCCACTGGAACGAACATGCTTACGCAAATTATCAACCTGTTGCCAG
FD549160       <-- GAAGTCCACTGGAACGAACATGCTTACGCAAATTATCAACCTGTTGCCAG
FD557534       <-- GGAGTCCACTGGAACGAACATGCTTACGCAAATTATCAACCTGTTGCCAG
EY946150       <-- GAAGTCCACTGGAACGAACATGCTTACGCAAATTATCAACCTGTTGCCAG
FD946986       <-- GAAGTCCACTGGAACGAACATGCTTACGCAAATTATCAACCTGTTGCCAG
FD553620       --> ..................................................
EY942301       --> ..................................................
FD943004       --> GAAGTCCACTGGAACGAACATGCTTACGCAAATTATCAACCTG.......
FD545245       --> ..................................................
EY903552       --> ..................................................
EV574595       --> ..................................................
EV574668       --> ..................................................

               901    -    951
UN17742        --> CCAAGTTGGGTCAACTCAGCATCAAAGTAGTCCTGAGACATGTAAGCCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY938479       <-- CCAAGTTGGGTCAACTCAGCATCAAAGTAGTCCTGAGACATGTAAGCCTT
FD549160       <-- CCAAGTTGGGTCAACTCAGCATCAAAGTAGTCCTGAGACATGTAAGCCTT
FD557534       <-- CCAAGTTGGGTCAACTCAGCATCAAAGTAGTCCTGAGACATGTAAGCCTT
EY946150       <-- CCAAGTTGGGTCAACTCAGCATCAAAGTAGTCCTGAGACATGTAAGCCTT
FD946986       <-- CCAAGTTGGGTCAACTCAGCATCAAAGTAGTCCTGAGACATGTAAGCCTT
FD553620       --> ..................................................
EY942301       --> ..................................................
FD943004       --> ..................................................
FD545245       --> ..................................................
EY903552       --> ..................................................
EV574595       --> ..................................................
EV574668       --> ..................................................

               951    -   1001
UN17742        --> ATAGTTCTTGTCCCCATCAACATTGTGGATCCCTTGAGCATGTCTCACTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY938479       <-- ATAGTTCTTGTCCCCATCAACATTGTGGATCCCTTGAGCATGCCTCACTA
FD549160       <-- ATAGTTCTTGTCCCCATCAACATTGTGGATCCCTTGAGCATGTCTCACTA
FD557534       <-- ATAGTTCTTGTCCCCATCAACATTGTGGATCCCTTGAGCATGTCTCACTA
EY946150       <-- ATAGTTCTTGTCCCCATCAACATTGTGGATCCCTTGAGCATGTCTCACTA
FD946986       <-- ATAGTTCTTGTCCCCATCAACATTGTGGATCCCTTGAGCATGTCTCACTA
FD553620       --> ..................................................
EY942301       --> ..................................................
FD943004       --> ..................................................
FD545245       --> ..................................................
EY903552       --> ..................................................
EV574595       --> ..................................................
EV574668       --> ..................................................

               1001   -   1051
UN17742        --> GGTAGATGGTTTTGCAGCGGTGCAGCGGGTACAAACCTATACCAGCGCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY938479       <-- GGTAGATGGTTTTGCAGCGGTGCAGCGGGTACAAACCTATACCAGCGCCA
FD549160       <-- GGTAGATGGTTTTGCAGCGGTGCAGCGGGTACAAACCTATACCAGCGCCA
FD557534       <-- GGTAGATGGTTTTGCAGCGGTGCA..........................
EY946150       <-- GGTAGATGGTTTTGCAGCGGTGCAGCGGGTACAAACCTATACCAGCGCCA
FD946986       <-- GGTAGATGGTTTTGCAGCGGTGCAGCGGGTACAAACCTATACCAGCGCCA
FD553620       --> ..................................................
EY942301       --> ..................................................
FD943004       --> ..................................................
FD545245       --> ..................................................
EY903552       --> ..................................................
EV574595       --> ..................................................
EV574668       --> ..................................................

               1051   -   1101
UN17742        --> GCCTCCATCT----------ATGAGATTGGTGGAGATGAACCTAAAGGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY938479       <-- GCCTCCATCT----------ATGAGATTGGTGGAGATGAACCTcc.....
FD549160       <-- GCCTCCATCTCTGCCAACTAATGAGATTGGTGGAGATGAACCGAAAGGAG
FD557534       <-- ..................................................
EY946150       <-- GCCTCCATCT----------ATGAGATTGGTGGAGATGAACCTAAAGGAG
FD946986       <-- GCCTCCATCT----------ATGAGATTGGTGGAGATGAACCTAAAGGAG
FD553620       --> ..................................................
EY942301       --> ..................................................
FD943004       --> ..................................................
FD545245       --> ..................................................
EY903552       --> ..................................................
EV574595       --> ..................................................
EV574668       --> ..................................................

               1101   -   1151
UN17742        --> GCTGAGGAGAGAAGATGGGAATGAAGTAGTAGGAGATGGTCGATGGATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY938479       <-- .................................................
FD549160       <-- GCTGAGGAGAGAAGATGGGAATGAAGTcc....................
FD557534       <-- .................................................
EY946150       <-- GCTGAGGAGAGAAGATGGGAATGAAGTAGTAGGAGATGGTCGATGGATT
FD946986       <-- GCTGAGGAGAG......................................
FD553620       --> .................................................
EY942301       --> .................................................
FD943004       --> .................................................
FD545245       --> .................................................
EY903552       --> .................................................
EV574595       --> .................................................
EV574668       --> .................................................