Library    |     Search    |     Batch query    |     SNP    |     SSR  

Alignment for radish unigene UN17757

               1      -     51
UN17757        --> GTCTCTTAAAGCTAACAAGTTAGACACTTGACATGGTTGAAAGTCAAGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524828       <-- GTCTCTTAAAGCTAACAAGTTAGACACTTGACATGGTTGAAAGTCGAGTG
FD938083       <-- ..............................ttttttTTGAAAGTCAAGTG
EW731378       <-- ..............................ggttgaaaGAAAGTCAAGTG
EW733532       <-- ..............................ggttgaaaGAAAGTCAAGTG
EY938200       <-- ......................................GAAAGTCAAGTG
EX894538       <-- ......................................ggAAGTCAAATG
EY929189       <-- ..................................................
EV525587       <-- ..................................................
EX894697       <-- ..................................................
EY930913       <-- ..................................................
EW736239       --> ..............................ggttgaaaGAAAGTCAAGTG
EY934389       --> ......................................GAAAGTCAAGTG
FD934554       --> ......................................GAAAGTCAAGTG
EV530295       --> ..................................................
EX898985       --> ..................................................
EY926989       --> ..................................................

               51     -    101
UN17757        --> CAGGAAGCTTACTCCTTCAATTGTTTACAA---GGTCATGATTTGGTGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524828       <-- CAGGAAGCTTACTCCTTCAATTGTTTACAACAAGGTCATGATTTGGTGAA  Raphanus raphanistrum subsp. maritimus
FD938083       <-- CAGGAAGCTTACTCTTTCAATTGTTTACAA---GGTCATGATTTGGTGAA  Raphanus sativus var. oleiformis
EW731378       <-- CAGGAAGCTTACTCCTTCAATTGTTTACAA---GGTCATGATTTGGTGAA  Raphanus sativus cv Rat-Tail Radish #3870
EW733532       <-- CAGGAAGCTTACTCCTTCAATTGTTTACAA---GGTCATGATTTGGTGAA  Raphanus sativus cv Rat-Tail Radish #3870
EY938200       <-- CAGGAAGCTTACTCCTTCAATTGTTTACAA---GGTCATGAATTGGTGAA  Raphanus sativus cv Early Scarlet Globe
EX894538       <-- CAGGAAGCTTACTCCTTCAATTGTTTACAA---GGTCATGAATTGGTGAA  Raphanus sativus cv Early Scarlet Globe
EY929189       <-- ..GGAAGCTTACTCCTTCAATTGTTTACAA---GGTCATGATTTGGTGAA  Raphanus sativus var. oleiformis
EV525587       <-- .............CCTTCAATTGTTTACAACAAGGTCATGATTTGGTGAA  Raphanus raphanistrum subsp. maritimus
EX894697       <-- .............CCTTCAATTGTTTACAA---GGTCATGAATTGGTGAA  Raphanus sativus cv Early Scarlet Globe
EY930913       <-- ..................................................  Raphanus sativus var. oleiformis
EW736239       --> CAGGAAGCTTACTCCTTCAATTGTTTACAA---GGTCATGATTTGGTGAA  Raphanus sativus cv Rat-Tail Radish #3870
EY934389       --> CAGGAAGCTTACTCCTTCAATTGTTTACAA---GGTCATGAATTGGTGAA  Raphanus sativus cv Early Scarlet Globe
FD934554       --> CAGGAAGCTTACTCCTTCAATTGTTTACAA---GGTCATGATTTGGTGAA  Raphanus sativus var. oleiformis
EV530295       --> .............CCTTCAATTGTTTACAACAAGGTCATGATTTGGTGAA  Raphanus raphanistrum subsp. maritimus
EX898985       --> .............CCTTCAATTGTTTACAA---GGTCATGAATTGGTGAA  Raphanus sativus cv Early Scarlet Globe
EY926989       --> ..........................ACAA---GGTCATGATTTGGTGAA  Raphanus sativus var. oleiformis

               101    -    151
UN17757        --> CAAAAAAAA-TACAGTATTGTACAAATGTAGACACACAATGAAGAAAGGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524828       <-- CAAAAAAAAATACAGTATTGTACATATGTAGACACACAATGAAGAAAGGG  Raphanus raphanistrum subsp. maritimus
FD938083       <-- CAAAAAAAA-TACAGTATTGTACAAATGTAGACACACAATGAAGAAAGGG  Raphanus sativus var. oleiformis
EW731378       <-- CAAAAAAAA-TACAGTATTGTACAAATGTAGACACACAAT-AAGAAAGGG  Raphanus sativus cv Rat-Tail Radish #3870
EW733532       <-- CAAAAAAAA-TACAGTATTGTACAAATGTAGACACACAAT-AAGAAAGGG  Raphanus sativus cv Rat-Tail Radish #3870
EY938200       <-- CAAAAAAAAATACAGTATTGTACAAATGTAGACACACAATGAAGAAAGGG  Raphanus sativus cv Early Scarlet Globe
EX894538       <-- CAAAAAAAAATACAGTATTGTACAAATGTAGACACACAATGAAGAAAGGG  Raphanus sativus cv Early Scarlet Globe
EY929189       <-- CAAAAAAAA-TACAGTATTGTACAAATGTAGACACACAATGAAGAAAGGG  Raphanus sativus var. oleiformis
EV525587       <-- CAAAAAAAAATACAGTATTGTACATATGTAGACACACAATGAAGAAAGGG  Raphanus raphanistrum subsp. maritimus
EX894697       <-- CAAAAAAAA-TACAGTATTGTACAAATGTAGACACACAATGAAGAAAGGG  Raphanus sativus cv Early Scarlet Globe
EY930913       <-- ..................................................  Raphanus sativus var. oleiformis
EW736239       --> CAAAAAAAA-TACAGTATTGTACAAATGTAGACACACAAT-AAGAAAGGG  Raphanus sativus cv Rat-Tail Radish #3870
EY934389       --> CAAAAAAAAATACAGTATTGTACAAATGTAGACACACAATGAAGAAAGGG  Raphanus sativus cv Early Scarlet Globe
FD934554       --> CAAAAAAAA-TACAGTATTGTACAAATGTAGACACACAATGAAGAAAGGG  Raphanus sativus var. oleiformis
EV530295       --> CAAAAAAAAATACAGTATTGTACATATGTAGACACACAATGAAGAAAGGG  Raphanus raphanistrum subsp. maritimus
EX898985       --> CAAAAAAAA-TACAGTATTGTACAAATGTAGACACACAATGAAGAAAGGG  Raphanus sativus cv Early Scarlet Globe
EY926989       --> CAAAAAAAA-TACAGTATTGTACAAATGTAGACACACAATGAAGAAAGGG  Raphanus sativus var. oleiformis

               151    -    201
UN17757        --> AGGAGAAGAGACTCTTTTGATATGGTTATCAAATGGAAGATATCTAGTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524828       <-- AGGAGAAG--ACTCTTTTGATATGGTTATCTGGTGGAAGATATCTAGTCA  Raphanus raphanistrum subsp. maritimus
FD938083       <-- AGGAGAAGAGACTCTTTTGATATGGTTATCAAATGGAAGATATCTAGTCA  Raphanus sativus var. oleiformis
EW731378       <-- AGGAGAAGAGACTGTTTCGATATGGTTATCTGGTGCAAGATATCTAATCA  Raphanus sativus cv Rat-Tail Radish #3870
EW733532       <-- AGGAGAAGAGACTGTTTCGATATGGTTATCTGGTGCAAGATATCTAATCA  Raphanus sativus cv Rat-Tail Radish #3870
EY938200       <-- AGGAGAAGAGACTCTTCTGATATGGTTATCAAATGGAAGATATCTAGTCA  Raphanus sativus cv Early Scarlet Globe
EX894538       <-- AGGAGAAGAGACTCTTTTGATATGGTTATCAAATGGAAGATATCTAGTCA  Raphanus sativus cv Early Scarlet Globe
EY929189       <-- AGGAGAAGAGACTCTTTTGATATGGTTATCAAATGGAAGATATCTAGTCA  Raphanus sativus var. oleiformis
EV525587       <-- AGGAGAAG--ACTCTTTTGATATGGTTATCTGGTGGAAGATATCTAGTCA  Raphanus raphanistrum subsp. maritimus
EX894697       <-- AGGAGAAGAGACTCTTTTGATATGGTTATCAAATGGAAGATATCTAGTCA  Raphanus sativus cv Early Scarlet Globe
EY930913       <-- ..................................................  Raphanus sativus var. oleiformis
EW736239       --> AGGAGAAGAGACTGTTTCGATATGGTTATCTGGTGCAAGATATCTAATCA  Raphanus sativus cv Rat-Tail Radish #3870
EY934389       --> AGGAGAAGAGACTCTTCTGATATGGTTATCAAATGGAAGATATCTAGTCA  Raphanus sativus cv Early Scarlet Globe
FD934554       --> AGGAGAAGAGACTCTTTTGATATGGTTATCAAATGGAAGATATCTAGTCA  Raphanus sativus var. oleiformis
EV530295       --> AGGAGAAGA--CTCTTTTGATATGGTTATCTGGTGGAAGATATCTAGTCA  Raphanus raphanistrum subsp. maritimus
EX898985       --> AGGAGAAGAGACTCTTTTGATATGGTTATCAAATGGAAGATATCTAGTCA  Raphanus sativus cv Early Scarlet Globe
EY926989       --> AGGAGAAGAGACTCTTTTGATATGGTTATCAAATGGAAGATATCTAGTCA  Raphanus sativus var. oleiformis

               201    -    251
UN17757        --> TCATCCTTGAACTCCCTCCGATCAAGGTATCGAGGTTGAACACCAGAGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524828       <-- TCATCCTTAAACTCCCTCCGATCAAGGTATCGAGGTTGAACACCAGAGCC
FD938083       <-- TCATCCTTGAACTCCCTCCGATCAAGGTATCGAGGTTGAACACCAGAGCC
EW731378       <-- TCATCCTTGAACTCCCTCCGATCAAGGTATCGAGGTTGAACACCAGAGCC
EW733532       <-- TCATCCTTGAACTCCCTCCGATCAAGGTATCGAGGTTGAACACCAGAGCC
EY938200       <-- TCATCCTTGAACTCCCTCCGATCAAGGTATCGAGGTTGAACACCAGGGCC
EX894538       <-- TCATCCTTGAACTCCCTCCGATCAAGGTATCGAGGTTGAACACCAGAGCC
EY929189       <-- TCATCCTTGAACTCCCTCCGATCAAGGTATCGAGGTTGAACACCAGAGCC
EV525587       <-- TCATCCTTAAACTCCCTCCGATCAAGGTATCGAGGTTGAACACCAGAGCC
EX894697       <-- TCATCCTTGAACTCCCTCCGATCAAGGTATCGAGGTTGAACACCAGAGCC
EY930913       <-- ..................................................
EW736239       --> TCATCCTTGAACTCCCTCCGATCAAGGTATCGAGGTTGAACACCAGAGCC
EY934389       --> TCATCCTTGAACTCCCTCCGATCAAGGTATCGAGGTTGAACACCAGGGCC
FD934554       --> TCATCCTTGAACTCCCTCCGATCAAGGTATCGAGGTTGAACACCAGAGCC
EV530295       --> TCATCCTTAAACTCCCTCCGATCAAGGTATCGAGGTTGAACACCAGAGCC
EX898985       --> TCATCCTTGAACTCCCTCCGATCAAGGTATCGAGGTTGAACACCAGAGCC
EY926989       --> TCATCCTTGAACTCCCTCCGATCAAGGTATCGAGGTTGAACACCAGAGCC

               251    -    301
UN17757        --> TTGACAAGTAGTGCAAGTCAAGGAACCAACACCATCACAATTGATACAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524828       <-- TTGACAAGTAGTGCAAGTCAAGGAACCAACACCATCACAATTGATACAGC
FD938083       <-- TTGACAAGTAGTGCAAGTCAAGGAACCAACACCATCACAATTGATACAGC
EW731378       <-- TTGACAAGTAGTGCAAATCAAGGAACCAACACCATCACAATTGATACAGC
EW733532       <-- TTGACAAGTAGTGCAAATCAAGGAACCAACACCATCACAATTGATACAGC
EY938200       <-- TTGACAAGTAGTGCAAGTCAAGGAACCAACACCATCACAATTGATACAGC
EX894538       <-- TTGACAAGTAGTGCAAGTCAAGGAACCAACACCATCACAATTGATACAGC
EY929189       <-- TTGACAAGTAGTGCAAGTCAAGGAACCAACACCATCACAATTGATACAGC
EV525587       <-- TTGACAAGTAGTGCAAGTCAAGGAACCAACACCATCACAATTGATACAGC
EX894697       <-- TTGACAAGTAGTGCAAGTCAAGGAACCAACACCATCACAATTGATACAGC
EY930913       <-- ..................................................
EW736239       --> TTGACAAGTAGTGCAAATCAAGGAACCAACACCATCACAATTGATACAGC
EY934389       --> TTGACAAGTAGTGCAAGTCAAGGAACCAACACCATCACAATTGATACAGC
FD934554       --> TTGACAAGTAGTGCAAGTCAAGGAACCAACACCATCACAATTGATACAGC
EV530295       --> TTGACAAGTAGTGCAAGTCAAGGAACCAACACCATCACAATTGATACAGC
EX898985       --> TTGACAAGTAGTGCAAGTCAAGGAACCAACACCATCACAATTGATACAGC
EY926989       --> TTGACAAGTAGTGCAAGTCAAGGAACCAACACCATCACAATTGATACAGC

               301    -    351
UN17757        --> TGGAGACTTCCTTCTCTCCTCCACCGAGCTCCACCGTCACGTTACCACTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524828       <-- TGGAGACTTCCTTCTCTCCTCCACCAAGCTCCACCGTCACGTTACCACTT  Raphanus raphanistrum subsp. maritimus
FD938083       <-- TGGAGACTTCCTTCTCTCCTCCACCGAGCTCCACCGTCACGTTACCACTT  Raphanus sativus var. oleiformis
EW731378       <-- TGGAGACTTCCTTCTCTCCTCCACCAAGCTCCACCGTCACGTTACCACTC  Raphanus sativus cv Rat-Tail Radish #3870
EW733532       <-- TGGAGACTTCCTTCTCTCCTCCACCAAGCTCCACCGTCACGTTACCACTC  Raphanus sativus cv Rat-Tail Radish #3870
EY938200       <-- TGGAGACTTCCTTCTATCCTCCACCGAGgc....................  Raphanus sativus cv Early Scarlet Globe
EX894538       <-- TGGAGACTTCCTTCTCTCCTCCACCGAGCTCCACCGTCACGTTACCACTT  Raphanus sativus cv Early Scarlet Globe
EY929189       <-- TGGAGACTTCCTTCTCTCCTCCACCGAGCTCCACCGTCACGTTACCACTT  Raphanus sativus var. oleiformis
EV525587       <-- TGGAGACTTCCTTCTCTCCTCCACCAAGCTCCACCGTCACGTTACCACTT  Raphanus raphanistrum subsp. maritimus
EX894697       <-- TGGAGACTTCCTTCTCTCCTCCACCGAGCTCCACCGTCACGTTACCACTT  Raphanus sativus cv Early Scarlet Globe
EY930913       <-- ..................................................  Raphanus sativus var. oleiformis
EW736239       --> TGGAGACTTCCTTCTCTCCTCCACCAAGCTCCACCGTCACGTTACCACTC  Raphanus sativus cv Rat-Tail Radish #3870
EY934389       --> TGGAGACTTCCTTCTATCCTCCACCGAGgc....................  Raphanus sativus cv Early Scarlet Globe
FD934554       --> TGGAGACTTCCTTCTCTCCTCCACCGAGCTCCACCGTCACGTTACCACTT  Raphanus sativus var. oleiformis
EV530295       --> TGGAGACTTCCTTCTCTCCTCCACCAAGCTCCACCGTCACGTTACCACTT  Raphanus raphanistrum subsp. maritimus
EX898985       --> TGGAGACTTCCTTCTCTCCTCCACCGAGCTCCACCGTCACGTTACCACTT  Raphanus sativus cv Early Scarlet Globe
EY926989       --> TGGAGACTTCCTTCTCTCCTCCACCGAGCTCCACCGTCACGTTACCACTT  Raphanus sativus var. oleiformis

               351    -    401
UN17757        --> CCCACACACAACCTGCACTTCTGAGCTCCAGTGCCATTGCAAGGAAAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524828       <-- CCTACACACAACCTGCACTTCTGAGCTCCAGTGCCATTGCAAGGAAAACA
FD938083       <-- CCCACACACAACCTGCACTTCTGAGCTCCAGTGCCATTGCAAGGAAAACA
EW731378       <-- CCCACACACAACCTGCACTTCTGAGCTCCAGTGCCATTGCAAGGAAAACA
EW733532       <-- CCCACACACAACCTGCACTTCTGAGCTCCAGTGCCATTGCAAGGAAAACA
EY938200       <-- ..................................................
EX894538       <-- CCCACACACAACCTGCACTTCTGAGCTCCAGTGCCATTGCAAGGAAAACA
EY929189       <-- CCCACACACAACCTGCACTTCTGAGCTCCGGTGCCATTGCAAGGAAAACA
EV525587       <-- CCTACACACAACCTGCACTTCTGAGCTCCAGTGCCATTGCAAGGAAAACA
EX894697       <-- CCCATACACAACCTGCACTTCTGAGCTCCAGTGCCATTGCAAGGAAAACA
EY930913       <-- ..........................................aggAAACA
EW736239       --> CCCACACACAACCTGCACTTCTGAGCTCCAGTGCCATTGCAAGGAAAACA
EY934389       --> ..................................................
FD934554       --> CCCACACACAACCTGCACTTCTGAGCTCCAGTGCCATTGCAAGGAAAACA
EV530295       --> CCTACACACAACCTGCACTTCTGAGCTCCAGTGCCATTGCAAGGAAAACA
EX898985       --> CCCATACACAACCTGCACTTCTGAGCTCCAGTGCCATTGCAAGGAAAACA
EY926989       --> CCCACACACAACCTGCACTTCTGAGCTCCAGTGCCATTGCAAGGAAAACA

               401    -    451
UN17757        --> AGGTTGAGTGTTCTCTCTCTTAGCGGCGTTATCGATCTGCGTCTCGTAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524828       <-- TGGTTGAGTGTTCTCTCTCTTAGCGGCGTTATCGATCTGCGTCTCGTAGA
FD938083       <-- AGGTTGAGTGTTCTCTCTCTTAGCGGCGTTATCGATCTGCGTCTCGTAGA
EW731378       <-- AGGTTGAGTGTTCTCTATCTTAGCGGCGTTATCGATCTGCGTCTCGTAGA
EW733532       <-- AGGTTGAGTGTTCTCTATCTTAGCGGCGTTATCGATCTGCGTCTCGTAGA
EY938200       <-- ..................................................
EX894538       <-- AGGTTGAGTGTTCTCTCTCTTAGCGGCGTTATCGATCTGCGTCTCGTAGA
EY929189       <-- AGGTTGAGTGTTCTCTCTCTTAGCGGCGTTATCGATCTGCGTCTCGTAGA
EV525587       <-- TGGTTGAGTGTTCTCTCTCTTAGCGGCGTTATCGATCTGCGTCTCGTAGA
EX894697       <-- AGGTTGAGTGTTCTCTCTCTTAGCGGCGTTATCGATCTGCGTCTCGTAGA
EY930913       <-- AGGTTGAGTGTTCTCTCTCTTAGCGGCGTTATCGATCTGCGTCTCGTAGA
EW736239       --> AGGTTGAGTGTTCTCTATCTTAGCGGCGTTATCGATCTGCGTCTCGTAGA
EY934389       --> ..................................................
FD934554       --> AGGTTGAGTGTTCTCTCTCTTAGCGGCGTTATCGATCTGCGTCTCGTAGA
EV530295       --> TGGTTGAGTGTTCTCTCTCTTAGCGGCGTTATCGATCTGCGTCTCGTAGA
EX898985       --> AGGTTGAGTGTTCTCTCTCTTAGCGGCGTTATCGATCTGCGTCTCGTAAA
EY926989       --> AGGTTGAGTGTTCTCTCTCTTAGCGGCGTTATCGATCTGCGTCTCGTAGA

               451    -    501
UN17757        --> AGACAGGGATTCCGATTCCCAGCGCGACGCTCGCCACGCCAACTGAGATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524828       <-- AGACAGGGATACCGATTCCCAGTGCGACGCTCGCCACGCCAACTGAGATT
FD938083       <-- AGACAGGGATTCCGATTCCCAGCGCGACGCTCGCCACGCCAACTGAGATT
EW731378       <-- AGACAGGGATTCCGATTCCCAGCGCGACGCTCGCCACGCCAACTGAGATT
EW733532       <-- AGACAGGGATTCCGATTCCCAGCGCGACGCTCGCCACGCCAACTGAGATT
EY938200       <-- ..................................................
EX894538       <-- AGACAGGGATTCCGATTCCCAGCGCGACGCTCGCCACGCCAACTGAGATT
EY929189       <-- AGACAGGGATTCCGATTCCCAGCGCGACGCTCGCCACGCCAACTGAGATT
EV525587       <-- AGACAGGGATACCGATTCCCAGTGCGACGCTCGCCACGCCAACTGAGATT
EX894697       <-- AGACAGGGATTCCGATTCCCAGCGCGACGCTCGCCACGCCAACTGAGATT
EY930913       <-- AGACAGGGATTCCGATTCCCAGCGCGACGCTCGCCACGCCAACTGAGATT
EW736239       --> AGACAGGGATTCCGATTCCCAGCGCGACGCTCGCCACGCCAACTGAGATT
EY934389       --> ..................................................
FD934554       --> AGACAGGGATTCCGATTCCCAGCGCGACGCTCGCCACGCCAACTGAGATT
EV530295       --> AGACAGGGATACCGATTCCCAGTGCGACGCTCGCCACGCCAACTGAGATT
EX898985       --> AGACAGGGATTCCGATTCCCAGCGCGACGCTCGCCACGCCAACTGAGATT
EY926989       --> AGACAGGGATTCCGATTCCCAGCGCGACGCTCGCCACGCCAACTGAGATT

               501    -    551
UN17757        --> GCGATTACCGTGTTCGTATCGACTTCTGATTTGATCCGCGGATAAGATGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524828       <-- GCGATTACCGTGTTCGTATCGACTTCTGATTTGATCCGCGGATAAGATGT
FD938083       <-- GCGATTACCGTGTTCGTATCGACTTCTGATTTGATCCGCGGATAAGATGT
EW731378       <-- ACGATTACCGTGTTCGTATCGACTTCTGATTTGATCCGCGGATAAGATGT
EW733532       <-- ACGATTACCGTGTTCGTATCGACTTCTGATTTGATCCGCGGATAAGATGT
EY938200       <-- ..................................................
EX894538       <-- GCGATTACCGTGTTCGTATCGACTTCTGATTTGATCCGCGGATAAGATGT
EY929189       <-- GCGATTACCGTGTTCGTATCGACTTCTGATTTGATCCGCGGATAAGATGT
EV525587       <-- GCGATTACCGTGTTCGTATCGACTTCTGATTTGATCCGCGGATAAGATGT
EX894697       <-- GCGATTACCGTGTTCGTATCGACTTCTGATTTGATCCGCGGATAAGATGT
EY930913       <-- GCGATTACCGTGTTCGTATCGACTTCTGATTTGATCCGCGGATAAGATGT
EW736239       --> ACGATTACCGTGTTCGTATCGACTTCTGATTTGATCCGCGGATAAGATGT
EY934389       --> ..................................................
FD934554       --> GCGATTACCGTGTTCGTATCGACTTCTGATTTGATCCGCGGATAAGATGT
EV530295       --> GCGATTACCGTGTTCGTATCGACTTCTGATTTGATCCGCGGATAAGATGT
EX898985       --> GCGATTACCGTGTTCGTATCGACTTCTGATTTGATCCGCGGATAAGATGT
EY926989       --> GCGATTACCGTGTTCGTATCGACTTCTGATTTGATCCGCGGATAAGATGT

               551    -    601
UN17757        --> TGTTGACGGCGAACGGAGGTTCCTCACGGAGAGTAAACGGGAAGAAGACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524828       <-- TGTTGACGGCGAACGGAGGTTCCTCGCGGAGAGTAAACGGGAAGAAGACG  Raphanus raphanistrum subsp. maritimus
FD938083       <-- TGTTGACGGCGAACGGAGGTTCCCCACGGAGAGTAAACGGGAAGAAGACG  Raphanus sativus var. oleiformis
EW731378       <-- TGTTGACGGCGAACGGAGGTTCCTCGCAGAGAGTAAACGGGAAGAAGACG  Raphanus sativus cv Rat-Tail Radish #3870
EW733532       <-- TGTTGACGGCGAACGGAGGTTCCTCGCAGAGAGTAAACGGGAAGAAGACG  Raphanus sativus cv Rat-Tail Radish #3870
EY938200       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX894538       <-- TGTTGACGGCGAACGGAGGTTCCTCACGGAGAGTAAACGGGAAGAAGACG  Raphanus sativus cv Early Scarlet Globe
EY929189       <-- TGTTGACGGCGAACGGAGGTTCCTCACGGAGAGTAAACGGGAAGAAGACG  Raphanus sativus var. oleiformis
EV525587       <-- TGTTGACGGCGAACGGAGGTTCCTCGCGGAGAGTAAACGGGAAGAAGACG  Raphanus raphanistrum subsp. maritimus
EX894697       <-- TGTTGACGACGAACGGAGGTTCCTCACGGAGAGTAAACGGGAAGAAGACG  Raphanus sativus cv Early Scarlet Globe
EY930913       <-- TGTTGACGGCGAACGGAGGTTCCTCACGGAGAGTAAACGGGAAGAAGACG  Raphanus sativus var. oleiformis
EW736239       --> TGTTGACGGCGAACGGAGGTTCCTCGCAGAGAGTAAACGGGAAGAAGACG  Raphanus sativus cv Rat-Tail Radish #3870
EY934389       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD934554       --> TGTTGACGGCGAACGGAGGTTCCCCACGGAGAGTAAACGGGAAGAAGACG  Raphanus sativus var. oleiformis
EV530295       --> TGTTGACGGCGAACGGAGGTTCCTCGCGGAGAGTAAACGGGAAGAAGACG  Raphanus raphanistrum subsp. maritimus
EX898985       --> TGTTGACGACGAACGGAGGTTCCTCACGGAGAGTAAACGGGAAGAAGACG  Raphanus sativus cv Early Scarlet Globe
EY926989       --> TGTTGACGGCGAACGGAGGTTCCTCACGGAGAGTAAACGGGAAGAAGACG  Raphanus sativus var. oleiformis

               601    -    651
UN17757        --> GAGTGGCATTGATCGGACGGTGGATGAACGGAGATTGGAGACGAGGCGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524828       <-- GAGTGGCATTGATTGGACGGTGGATGAACGGAGATTGGAGACGAGGCGGA  Raphanus raphanistrum subsp. maritimus
FD938083       <-- GAGTGGCATTGATCGGACGGTGGATGAACGGAGATTGGAGACGAGGCGGA  Raphanus sativus var. oleiformis
EW731378       <-- GAGTGGCATTGATTGGACGGTGTATGAACAGAGATTGGAGACGAGGCGGA  Raphanus sativus cv Rat-Tail Radish #3870
EW733532       <-- GAGTGGCATTGATTGGACGGTGTATGAACAGAGATTGGAGACGAGGCGGA  Raphanus sativus cv Rat-Tail Radish #3870
EY938200       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX894538       <-- GAGTGGCATTGATCGGACGGTGGATGAACGGAGATTGGAGACGAGGCGGA  Raphanus sativus cv Early Scarlet Globe
EY929189       <-- GAGTGGCATTGATCGGACGGTGGATGAACGGAGATTGGAGACGAGGCGc.  Raphanus sativus var. oleiformis
EV525587       <-- GAGTGGCATTGATTGGACGGTGGATGAACGGAGATTGGAGACGAGGCGGA  Raphanus raphanistrum subsp. maritimus
EX894697       <-- GAGTGGCATTGATCGGACGGTGGATGAACGGAGATTGGAGACGAGGCGGA  Raphanus sativus cv Early Scarlet Globe
EY930913       <-- GAGTGGCATTGATCGGACGGTGGATGAACGGAGATTGGAGACGAGGCGGA  Raphanus sativus var. oleiformis
EW736239       --> GAGTGGCATTGATTGGACGGTGTATGAACAGAGATTGGAGACGAGGCGGA  Raphanus sativus cv Rat-Tail Radish #3870
EY934389       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD934554       --> GAGTGGCATTGATCGGACGGTGGATGAACGGAGATTGGAGACGAGGCGGA  Raphanus sativus var. oleiformis
EV530295       --> GAGTGGCATTGATTGGACGGTGGATGAACGGAGATTGGAGACGAGGCGGA  Raphanus raphanistrum subsp. maritimus
EX898985       --> GAGTGGCATTGATCGGACGGTGGATGAACGGAGATTGGAGACGAGGCGGA  Raphanus sativus cv Early Scarlet Globe
EY926989       --> GAGTGGCATTGATCGGACGGTGGATGAACGGAGATTGGAGACGAGGCGGA  Raphanus sativus var. oleiformis

               651    -    701
UN17757        --> GACGGAGATGATGATACTGGCATTTTTACGATGGTGTGAAGAAGCTACGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524828       <-- GACGGAGACGATGATACTGGCATTTTTACGATGGTGTGAAGAAGaagaag
FD938083       <-- GACGGAGATGATGATACTGGCATTTTTACGATGGTGTGAAGAAGCTACGC
EW731378       <-- GACGGAGATGATGATACTGGCATTTTTACGATGGTGccc...........
EW733532       <-- GACGGAGATGATGATACTGGCATTTTTACGATGGTGccc...........
EY938200       <-- ..................................................
EX894538       <-- GACGGAGATGATGATACTGGCATTTTTACGATGGTGTGAAGAAGCTccc.
EY929189       <-- ..................................................
EV525587       <-- GACGGAGATGATGATACTGGCATTTTTACGATGGTGTGAAGAAGaagaag
EX894697       <-- GACGGAGATGATGATACTGGCATTTTTACGATGGTGTGAAGAAGCTACGC
EY930913       <-- GACGGAGATGATGATACTGGCATTTTTACGATGGTGTGAAGAAGCTACGC
EW736239       --> GACGGAGATGATGATACTGGCATTTTTACGATGGTGccc...........
EY934389       --> ..................................................
FD934554       --> GACGGAGATGATGATACTGGCATTTTTACGATGGTGTGAAGAAGCTACGC
EV530295       --> GACGGAGATGATGATACTGGCATTTTTACGATGGTGTGAAGAAGaa....
EX898985       --> GACGGAGATGATGATACTGGCATTTTTACGATGGTGTGAAGAAGCTACGC
EY926989       --> GACGGAGATGATGATACTGGCATTTTTACGATGGTGTGAAGAAGCTACGC

               701    -    751
UN17757        --> AGCGAACTTCGCCCCGGCCGTAAGCAGTGGTATCAACGCAGAGTGGAGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524828       <-- ctactcagaacttcgcgtcc..............................
FD938083       <-- cc................................................
EW731378       <-- ..................................................
EW733532       <-- ..................................................
EY938200       <-- ..................................................
EX894538       <-- ..................................................
EY929189       <-- ..................................................
EV525587       <-- aagctactcagaacttcgcgtcc...........................
EX894697       <-- AGCGAACTTCGCgtcc..................................
EY930913       <-- AGCGAACTTCCCCCCGGCCGTAAGCAGTGGTATCAACGCAGAGTGGAGGC
EW736239       --> ..................................................
EY934389       --> ..................................................
FD934554       --> cc................................................
EV530295       --> ..................................................
EX898985       --> AGCGAACTTCGCgtcc..................................
EY926989       --> AGCGAACTTCCCCCCGGC................................

               751    -    801
UN17757        --> GATTATATGAGGGACACGCGTCGTTGAGTCATAAGCTAAGAATAAGAATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524828       <-- ..................................................
FD938083       <-- ..................................................
EW731378       <-- ..................................................
EW733532       <-- ..................................................
EY938200       <-- ..................................................
EX894538       <-- ..................................................
EY929189       <-- ..................................................
EV525587       <-- ..................................................
EX894697       <-- ..................................................
EY930913       <-- GATTATATGAGGGACACGCGTCGTTGAGTCATAAGCTAAGAATAAGAATA
EW736239       --> ..................................................
EY934389       --> ..................................................
FD934554       --> ..................................................
EV530295       --> ..................................................
EX898985       --> ..................................................
EY926989       --> ..................................................

               801    -    851
UN17757        --> CATTTGGTTTTAGAGAAATTACAGTTTATATACAAAATTTATACCTTAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524828       <-- ..................................................
FD938083       <-- ..................................................
EW731378       <-- ..................................................
EW733532       <-- ..................................................
EY938200       <-- ..................................................
EX894538       <-- ..................................................
EY929189       <-- ..................................................
EV525587       <-- ..................................................
EX894697       <-- ..................................................
EY930913       <-- CATTTGGTTTTAGAGAAATTACAGTTTATATACAAAATTTATACCTTAAG
EW736239       --> ..................................................
EY934389       --> ..................................................
FD934554       --> ..................................................
EV530295       --> ..................................................
EX898985       --> ..................................................
EY926989       --> ..................................................

               851    -    901
UN17757        --> TGAATACTCTAAATCTCACCATGACCTTAGTTGATAGAGAGCAAACTTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524828       <-- ..................................................
FD938083       <-- ..................................................
EW731378       <-- ..................................................
EW733532       <-- ..................................................
EY938200       <-- ..................................................
EX894538       <-- ..................................................
EY929189       <-- ..................................................
EV525587       <-- ..................................................
EX894697       <-- ..................................................
EY930913       <-- TGAATACTCTAAATCTCACCATGACCTTAGTTGATAGAGAGCAAACTTGT
EW736239       --> ..................................................
EY934389       --> ..................................................
FD934554       --> ..................................................
EV530295       --> ..................................................
EX898985       --> ..................................................
EY926989       --> ..................................................

               901    -    951
UN17757        --> CATATCATACTGTATCTAGTTTGCTAATTTCATCATTTTTTTTGGGTTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524828       <-- ..................................................
FD938083       <-- ..................................................
EW731378       <-- ..................................................
EW733532       <-- ..................................................
EY938200       <-- ..................................................
EX894538       <-- ..................................................
EY929189       <-- ..................................................
EV525587       <-- ..................................................
EX894697       <-- ..................................................
EY930913       <-- CATATCATACTGTATCTAGTTTGCTAATTTCATCATTTTTTTTGGGTTTT
EW736239       --> ..................................................
EY934389       --> ..................................................
FD934554       --> ..................................................
EV530295       --> ..................................................
EX898985       --> ..................................................
EY926989       --> ..................................................

               951    -   1001
UN17757        --> AAACCAATTCACTTTTGGTTTTCTTTATGTTCTTTTTTTTGACAAAAAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524828       <-- ..................................................
FD938083       <-- ..................................................
EW731378       <-- ..................................................
EW733532       <-- ..................................................
EY938200       <-- ..................................................
EX894538       <-- ..................................................
EY929189       <-- ..................................................
EV525587       <-- ..................................................
EX894697       <-- ..................................................
EY930913       <-- AAACCAATTCACTTTTGGTTTTCTTTATGTTCTTTTTTTTGACAAAAAAT
EW736239       --> ..................................................
EY934389       --> ..................................................
FD934554       --> ..................................................
EV530295       --> ..................................................
EX898985       --> ..................................................
EY926989       --> ..................................................

               1001   -   1051
UN17757        --> AATTTTAATTTATGTCTTTTATTCGAGTTTAGTTTTTTTCTTTGTTAATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524828       <-- ..................................................
FD938083       <-- ..................................................
EW731378       <-- ..................................................
EW733532       <-- ..................................................
EY938200       <-- ..................................................
EX894538       <-- ..................................................
EY929189       <-- ..................................................
EV525587       <-- ..................................................
EX894697       <-- ..................................................
EY930913       <-- AATTTTAATTTATGTCTTTTATTCGAGTTTAGTTTTTTTCTTTGTTAATA
EW736239       --> ..................................................
EY934389       --> ..................................................
FD934554       --> ..................................................
EV530295       --> ..................................................
EX898985       --> ..................................................
EY926989       --> ..................................................

               1051   -   1101
UN17757        --> ATTTCGAGTTTAGTTACTTGC
                   ~~~~~~~~~~~~~~~~~~~~~
EV524828       <-- .....................
FD938083       <-- .....................
EW731378       <-- .....................
EW733532       <-- .....................
EY938200       <-- .....................
EX894538       <-- .....................
EY929189       <-- .....................
EV525587       <-- .....................
EX894697       <-- .....................
EY930913       <-- ATTTCGAGTTTAGTTACTTGC
EW736239       --> .....................
EY934389       --> .....................
FD934554       --> .....................
EV530295       --> .....................
EX898985       --> .....................
EY926989       --> .....................