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Alignment for radish unigene UN17947

               1      -     51
UN17947        --> GGGTGTTTTATCTTCTTCTTCTACTTCTTGGATGAAGCAGTGAA-GGATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV541286       <-- ..................................................
EY902742       <-- ..................................................
EX887096       --> GGGTGTTTTATCTTCTTCTTCTACTTCTTGGATGAAGCAGTGAA-GGATT
EY906610       --> ..GTGTTTTATCTTCTTCTTCTACTTCTTGGACGAAGCAGTGAAAGGATT
FD947410       --> ..GTGTTTTATCTTCTTCTTCTACTTCTTGGATGAAGCAGTGAA-GGATT
FY452521       --> ...........CTTCTTCTTCTACTTCTTGGATGAAGCAGTGAA-GGATT
EV536945       --> ............................gGGACGAAGCAGTGAAAGGATT
FY450220       --> ..................................................
FY453736       --> ..................................................
EY938455       --> ..................................................
FD541018       --> ..................................................
FD556629       --> ..................................................
EY931126       --> ..................................................

               51     -    101
UN17947        --> GATTCTCTGTCAATTTTTTCTGAATTATATCTGCGTTGGAGACAGAAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV541286       <-- ..................................................
EY902742       <-- ..................................................
EX887096       --> GATTCTCTGTCAATTTTTTCTGAATTATATCTGCGTTGGAGACAGAAGAG
EY906610       --> GATTCTCTGTCAATTTTTTCTCAATTATATCTACGTTGGAGACAGAAGAG
FD947410       --> GATTCTCTGTCAATTTTTTCTGAATTATATCTGCGTTGGAGACAGAAGAG
FY452521       --> GATTCTCTGTCAATTTTTTCTGAATTATATCTGCGTTGGAGACAGAAGAG
EV536945       --> GATTCTCTGTCAATTTTTTCTCAATTATATCTACGTTGGAGACAGAAGAG
FY450220       --> GATTCTCTGTCAATTTTTTCTGAATTATATATGCGTTGGAGACAGAAGAG
FY453736       --> GATTCTCTGT-AATTTTTTCTGAATTA-ATCTGCGTTGGAGACAGAAGAG
EY938455       --> .............TTTTTTCTGAATTATATCTGCGTTGGAGACAGAAGAG
FD541018       --> ..........................ATATCTACGTTGGAGACAGAAGAG
FD556629       --> ..................................................
EY931126       --> ..................................................

               101    -    151
UN17947        --> AAGAGAAGTTCAAACAGTGATTGGGAGAGATAGATAGATGAGTTCGTCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV541286       <-- ..................................................
EY902742       <-- ..................................................
EX887096       --> AAGAGAAGTTCAAACAGTGATTGGGAGAGATAGATAGATGAGTTCGTCTC
EY906610       --> AAGAGAAGTTCAA-CAGTGATTGGGAGAGATAGATAGATGAGTTCGTCTC
FD947410       --> AAGAGAAGTTCAAACAGTGATTGGGAGAGATAGATAGATGAGTTCGTCTC
FY452521       --> AAGAGAAGTTCAAACAGTGATTGGGAGAGATAGATAGATGAGTTCGTCTC
EV536945       --> AAGAGAAGTTCAA-CAGTGATTGGGAGAGATAGATAGATGAGTTCGTCTC
FY450220       --> AAGAGAAGTTCAAACAGTGATTGGGAGAGATAGATAGATGAGTTCGTCTC
FY453736       --> AAGAGAAGTTCAAACAGTGATTGGGAGAGATAGATAGATGAGTTCGTCTC
EY938455       --> AAGAGAAGTTCAAACAGTGATTGGGAGAGATAGATAGATGAGTTCGTCTC
FD541018       --> AAGAGAAGTTCAA-CAGTGATTGGGAGAGATAGATAGATGAGTTCGTCTC
FD556629       --> ........ggaAAACAGTGATTGGGAGAGATAGATAGATGAGTTCGTCTC
EY931126       --> ..................................................

               151    -    201
UN17947        --> TACCTATGAGGCTCCTTCTTCTACCTCTTACACCTTCTTTGATTTCTCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV541286       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902742       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX887096       --> TACCTATGAGGCTCCTTCTTCTACCTCTTACACCTTCTTTGATTTCTCCT  Raphanus sativus var. oleiformis
EY906610       --> TACCTATGAGGCTCCTTCTTCTGCCTCTTACACCTTCTTTGATTTCTCCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD947410       --> TACCTATGAGGCTCCTTCTTCTACCTCTTACACCTTCTTTGATTTCTCCT  Raphanus sativus cv Early Scarlet Globe
FY452521       --> TACCTATGAGGCTCCTTCTTCTACCTCTTACACCTTCTTTGATTTCTCCT  Raphanus sativus cv GSK3-1
EV536945       --> TACCTATGAGGCTCCTTCTTCTGCCTCTTACACCTTCTTTGATTTCTCCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FY450220       --> TACCTATGAGGCTCCTTCTTCTACCTCTTACACCTTCTTTGATTTCTCCT  Raphanus sativus cv GSK3-1
FY453736       --> TACCTATGAGGCTCCTTCTTCTACCTCTTACACCTTCTTTGATTTCTCCT  Raphanus sativus cv GSK3-1
EY938455       --> TACCTATGAGGCTCCTTCTTCTACCTCTTACACCTTCTTTGATTTCTCCT  Raphanus sativus cv Early Scarlet Globe
FD541018       --> TACCTATGAGGCTCCTTCTTCTGCCTCTTACACCTTCTTTGATTTCTCCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD556629       --> TACCTATGAGGCTCCTTCTTCTGCCTCTTACACCTTCTTTGATTTCTCCT  Raphanus raphanistrum subsp. landra
EY931126       --> ..................................................  Raphanus sativus var. oleiformis

               201    -    251
UN17947        --> CCTCCGGATTCTTCTCATAAGCCGCTCCGATCGCAAAACCCTAATTTCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV541286       <-- ..................................................
EY902742       <-- ..................................................
EX887096       --> CCTCCGGATTCTTCTCATAAGCCGCTCCGATCGCAAAACCCTAATTTCAT
EY906610       --> CCTCCGGATTCTTCTCATAAGCCTCTCCGATCGCAAAACCCTAATTTCAT
FD947410       --> CCTCCGGATTCTTCTCATAAGCCGCTCCGATCGCAAAACCCTAATTTCAT
FY452521       --> CCTCCGGATTCTTCTCATAAGCCGCTCCGATCGCAAAACCCTAATTTCAT
EV536945       --> CCTCCGGATTCTTCTCATAAGCCTCTCCGATCGCAAAACCCTAATTTCAT
FY450220       --> CCTCCGGATTCTTCTCATAAGCCGCTCCGATCGCAAAACCCTAATTTCAT
FY453736       --> CCTCCGGATTCTTCTCATAAGCCGCTCCGATCGCAAAACCCTAATTTCAT
EY938455       --> CCTCCGGATTCTTCTCATAAGCCGCTCTGATCGCAAAACCCTAATTTCAT
FD541018       --> CCTCCGGATTCTTCTCATAAGCCTCTCCGATCGCAAAACCCTAATTTCAT
FD556629       --> CCTCCGGATTCTTCTCATAAGCCGCTCCGATCGCAAAACCCTAATTTCAT
EY931126       --> ..................................................

               251    -    301
UN17947        --> TCTCCGGTCCTCTTCTTCTACTACTCCTTCATCGCCGCAGCTTTTCCCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV541286       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902742       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX887096       --> TCTCCGGTCCTCTTCTTCTACTACTCCTTCATCGCCGCAGCTTTTCCCCC  Raphanus sativus var. oleiformis
EY906610       --> TCTCCGCTCCTCTTCTTCTACTACTCCTTCATCGCCGCAGCTTTTCCCCC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD947410       --> TCTCCGGTCCTCTTCTTCTACTACTCCTTCATCGCCGCAGCTTTTCCCCC  Raphanus sativus cv Early Scarlet Globe
FY452521       --> TCTCCGGTCCTCTTCTTCTACTACTCCTTCATCGCCGCAGCTTTTCCCCC  Raphanus sativus cv GSK3-1
EV536945       --> TCTCCGCTCCTCTTCTTCTACTACTCCTTCATCGCCGCAGCTTTTCCCCC  Raphanus raphanistrum subsp. raphanistrum (MS)
FY450220       --> TCTCCGGTCCTCTTCTTCTACTACTCCTTCATCGCCGCAGCTTTTCCCCC  Raphanus sativus cv GSK3-1
FY453736       --> TCTCCGGTCCTCTTCTTCTACTACTCCTTCATCGCCGCAGCTTTTCCCCC  Raphanus sativus cv GSK3-1
EY938455       --> TCTCCGGTCCTCTTCTTCTACTACTCCTTCATCGCCGCAGCTTTTCCCCC  Raphanus sativus cv Early Scarlet Globe
FD541018       --> TCTCCGCTCCTCTTCTTCTACTACTCCTTCATCGCCGCAGCTTTTCCCCC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD556629       --> TCTCCGCTCCTCTTCTTCTACTACTCCTTCATCGCCGCAGCTTTTCCTCC  Raphanus raphanistrum subsp. landra
EY931126       --> ..................................................  Raphanus sativus var. oleiformis

               301    -    351
UN17947        --> GGCGATCCAGATCCTCTTCTCCCTGTGTTCCCATGTGTGTTCCCCAACAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV541286       <-- ..........................GTTTCCATGTGTTTTCCCCAACAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902742       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX887096       --> GGCGATCCAGATCCTCTTCTCCCTGTGTTCCCATGTGTGTTCCCCAACAC  Raphanus sativus var. oleiformis
EY906610       --> GGCGATCCAGATCCTCTTCTCCCTGTGTTTCCATGTGTTTTCCCCAACAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD947410       --> GGCGATCCA.........................................  Raphanus sativus cv Early Scarlet Globe
FY452521       --> GGCGATCCAGATCCTCTTCTCCCTGTGTTCCCATGTGTGTTCCCCAACAC  Raphanus sativus cv GSK3-1
EV536945       --> GGCGATCCAGATCCTCTTCTCCCTGTGTTTCCATGTGTTTTCCCCAACAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FY450220       --> GGCGATCCAGATCCTCTTCTCCCTGTGTTCCCATGTGTGTTCCCCAACAC  Raphanus sativus cv GSK3-1
FY453736       --> GGCGATCCAGATCCTCTTCTCCCTGTGTTCCCATGTGTGTTCCCCAACAC  Raphanus sativus cv GSK3-1
EY938455       --> GGCGATCCAGATCCTCTTCTCCCTGTGTTCCCATGTGTGTTCCCCAACAC  Raphanus sativus cv Early Scarlet Globe
FD541018       --> GGCGATCCAGATCCTCTTCTCCCTGTGTTTCCATGTGTTTTCCCCAACAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD556629       --> GACGATCCAGATCCTCTTCTCCGTGTGTTCCCATGTGTTTTCCCCAACAC  Raphanus raphanistrum subsp. landra
EY931126       --> .......................gGTGTTCCCATGTGTGTTCCCCAACAC  Raphanus sativus var. oleiformis

               351    -    401
UN17947        --> AAGGAAGATCAAGCCAACACAGACACTTGGAGGAATGAAGACGATGATCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV541286       <-- AAGGAAGATCAAGCCAACACAGATACTTGGAGGAATGAAGAAGATGATCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902742       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX887096       --> AAGGAAGATCAAGCCAACACAGACACTTGGAGAAGTGAAGACGATGATCA  Raphanus sativus var. oleiformis
EY906610       --> AAGGAAGATCAAGCCAACACAGATACTTGGAGGAATGAAGAAGATGATCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD947410       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FY452521       --> AAGGAAGATCAAGCCAACACAGACACTTGGAGAAATGAAGACGATGATCA  Raphanus sativus cv GSK3-1
EV536945       --> AAGGAAGATCAAGCCAACACAGATACTTGGAGGAATGAAGAAGATGATCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FY450220       --> AAGGAAGATCAAGCCAACACAGACACTTGGAGAAATGAAGACGATGATCA  Raphanus sativus cv GSK3-1
FY453736       --> AAGGAAGATCAAGCCAACACAGACACTTGGAGAAATGAAGACGATGATCA  Raphanus sativus cv GSK3-1
EY938455       --> AAGGAAGATCAAGCCAACACAGACACTTGGAGAAATGAAGACGATGATCA  Raphanus sativus cv Early Scarlet Globe
FD541018       --> AAGGAAGATCAAGCCAACACAGATACTTGGAGGAATGAAGAAGATGATCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD556629       --> AAGCAAGATCAAGCCAACACAGATACTTGGAGGAATGAAGAAGATGATCA  Raphanus raphanistrum subsp. landra
EY931126       --> AAGGAAGATCAAGCCAACACAGACACTTGGAGAAATGAAGACGATGATCA  Raphanus sativus var. oleiformis

               401    -    451
UN17947        --> CATTACATGTGGGCTTGAATCAGATGAAGATTCCGGCGGCCTCCGGATTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV541286       <-- CATTACATGTGGGCTTGAATCAGATGAAGATTCCGGCGGCCTCCGGATTC
EY902742       <-- ..................................................
EX887096       --> CATTACATGTGGGCTTGAATCAGATGAAGATTCCGGCGGCCTCCGGATTC
EY906610       --> CATTACATGTGGGCTTGAATCAGATGAAGATTCCGGCGGCCTCCGGATTC
FD947410       --> ..................................................
FY452521       --> CATTACATGTGGGCTTGAATCAGATGAAGATTCCGGCGGCCTCCGGATTC
EV536945       --> CATTACATGTGGGCTTGAATCAGATGAAGATTCCGGCGGCCTCCGGATTC
FY450220       --> CATTACATGTGGGCTTGAATCAGATGAAGATTCCGGCGGCCTCCGGATTC
FY453736       --> CATTACATGTGGGCTTGAATCAGATGAAGATTCCGGCGGCCTCCGGATTC
EY938455       --> CATTACATGTGGGCTTGAATCAGATGAAGATTCCGGCGGCCTCCGGATTC
FD541018       --> CATTACATGTGGGCTTGAATCAGATGAAGATTCCGGCGGCCTCCGGATTC
FD556629       --> CATTACATGTGGGCTTGAATCAGATGAAGATTCCGGCGGCCTCCGGATTC
EY931126       --> CATTACATGTGGGCTTGAATCAGATGAAGATTCCGGCGGCCTCCGGATTC

               451    -    501
UN17947        --> CTACTCAGGCTCAGGCCATTGTTGAAGGATCTGGTTCTGTTGCTGTCTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV541286       <-- CTACTCAGGCTCAGGCCATTGTTGAAGGATCTGGTTCAGTTGCTGTCTCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902742       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX887096       --> CTACTCAGGCTCAGGCCATTGTTGAAGGATCTGGTTCTGCTGCTGTCTCT  Raphanus sativus var. oleiformis
EY906610       --> CTACTCAGGCTCAGGCCATTGTTGAAGGATCTGGTTCAGTTGCTGTCTCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD947410       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FY452521       --> CTACTCAGGCTCAGGCCATTGTTGAAGGATCTGGTTCTGTTGCTGTCTCT  Raphanus sativus cv GSK3-1
EV536945       --> CTACTCAGGCTCAGGCCATTGTTGAAGGATCTGGTTCAGTTGCTGTCTCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FY450220       --> CTACTCAGGCTCAGGCCATTGTTGAAGGATCTGGTTCTGTTGCTGTCTCT  Raphanus sativus cv GSK3-1
FY453736       --> CTACTCAGGCTCAGGCCATTGTTGAAGGATCTGGTTCTGTTGCTGTCTCT  Raphanus sativus cv GSK3-1
EY938455       --> CTACTCAGGCTCAGGCCATTGTTGAAGGATCTGGTTCTGTTGCTGTCTCT  Raphanus sativus cv Early Scarlet Globe
FD541018       --> CTACTCAGGCTCAGGCCATTGTTGAGGGATCTGGTTCAGTTGCTGTCTCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD556629       --> CTACTCAGGCTCAGGCCATTGTTGAAGGATCTGGTTCTGTTGCTGTCTCT  Raphanus raphanistrum subsp. landra
EY931126       --> CTACTCAGGCTCAGGCCATTGTTGAAGGATCTGGTTCTGTTGCTGTCTCT  Raphanus sativus var. oleiformis

               501    -    551
UN17947        --> GAGCTCAAACCTTCCCCTGATGTTGATTACATTCAAGAGCTGTTGGCGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV541286       <-- GAGCTCAAACCTTCCCCTGATGTTGATTACATTCAAGAGCTATTGGCGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902742       <-- ....................TGTTGATTACATTCAAGAGCTATTGGCGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX887096       --> GAGCTCAAACCTTCCCCTGATGTTGATTACATTCAAGAGCTGTTGGCGAT  Raphanus sativus var. oleiformis
EY906610       --> GAGCTCAAACCTTCCCCTGATGTTGATTACATTCAAGAGCTATTGGCGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD947410       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FY452521       --> GAGCTCAAACCTTCCCCTGATGTTGATTACATTCAAGAGCTGTTGGCGAT  Raphanus sativus cv GSK3-1
EV536945       --> GAGCTCAAACCTTCCCCTGATGTTGATTACATTCAAGAGCTATTGGCGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FY450220       --> GAGCTCAAACCTTCCCCTGATGTTGATTACATTCAAGAGCTGTTGGCGAT  Raphanus sativus cv GSK3-1
FY453736       --> GAGCTCAAACCTTCCCCTGATGTTGATTACATTCAAGAGCTGTTGGCGAT  Raphanus sativus cv GSK3-1
EY938455       --> GAGCTCAAACCTTCCCCTGATGTTGATTACATTCAAGAGCTGTTGGCGAT  Raphanus sativus cv Early Scarlet Globe
FD541018       --> GAGCTCAAACCTTCCCCTGATGTTGATTACATTCAAGAGCTATTGGCGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD556629       --> GAGCTCAAACCTTCCCCTGATGTTGATTACATTCAAGAGCTATTGGCGAT  Raphanus raphanistrum subsp. landra
EY931126       --> GAGCTCAAACCTTCCCCTGATGTTGATTACATTCAAGAGCTGTTGGCGAT  Raphanus sativus var. oleiformis

               551    -    601
UN17947        --> ACAGCAACAAGGGCCTAGAACAATTGGCTTCTTTGGGACCAGGAACATGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV541286       <-- ACAGCAACAAGGGCCTAGAACAATTGGCTTCTTTGGGACCAGGAACATGG
EY902742       <-- ACAGCAACAAGGGCCTAGAACAATTGGCTTCTTTGGGACCAGGAACATGG
EX887096       --> ACAGCAACAAGGGCCTAGAACAATTGGCTTCTTTGGGACCAGGAACATGG
EY906610       --> ACAGCA............................................
FD947410       --> ..................................................
FY452521       --> ACAGCAACAAGGGCCTAGAACAATTGGCTTCTTTGGGACCAGGAACATGG
EV536945       --> ACAGCAACAAGGGCCTAGAACAATTGGCTTCTTTGGGACCAGGAACATGG
FY450220       --> ACAGCAACAAGGGCCTAGAACAATTGGCTTCTTTGGGACCAGGAACATGG
FY453736       --> ACAGCAACAAGGGCCTAGAACAATTGGCTTCTTTGGGACCAGGAACATGG
EY938455       --> ACAGCAACAAGGGCCTAGAACAATTGGCTTCTTTGGGACCAGGAACATGG
FD541018       --> ACAGCAACAAGGGCCTAGAACAATTGGCTTCTTTGGGACCAGGAACATGG
FD556629       --> ACAGCAACAAGGGCCTAGAACAATTGGCTTCTTTGGGACCAGGAACATGG
EY931126       --> ACAGCAACAAGGGCCTAGAACAATTGGCTTCTTTGGGACCAGGAACATGG

               601    -    651
UN17947        --> GTTTCATGCATCAAGAGCTCATCGAGATACTTAGCTACGCCATGGTTATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV541286       <-- GTTTCATGCATCAAGAGCTCATCGAGATACTTAGCTACGCCATGGTTATT
EY902742       <-- GTTTCATGCATCAAGAGCTCATCGAGATACTTAGCTGCGCCATGGTTATT
EX887096       --> GTTTCATGCATCAAGAGCTCATCGAGATACTTAGCTACGCCATGGTTATT
EY906610       --> ..................................................
FD947410       --> ..................................................
FY452521       --> GTTTCATGCATCAAGAGCTCATCGAGATACTTAGCTACGCCATGGTTATT
EV536945       --> GTTTCATGCATCAAGAGCTCATCGAGATACTTAGCTACGCCATGGTTATT
FY450220       --> GTTTCATGCATCAAGAGCTCATCGAGATACTTAGCTACGCCATGGTTATT
FY453736       --> GTTTCATGCATCAAGAGCTCATCGAGATACTTAGCTACGCCATGGTTATT
EY938455       --> GTTTCATGCATCAAGAGCTCATCGAGATACTTAGCTACGCCATGGTTATT
FD541018       --> GTTTCATGCATCAAGAGCTCATCGAGATACTTAGCTACGCCATGGTTATT
FD556629       --> GTTTCATGCATCAAGAACTCATCGAGATACTTAGCTACGCCATGGTTATT
EY931126       --> GTTTCATGCATCAAGAGCTCATCGAGATACTTAGCTACGCCATGGTTATT

               651    -    701
UN17947        --> ACTAAAAATCATATATATA--CTTCAGGTGCATCTGGAACTAACGCAGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV541286       <-- ACTAAAAACCATATATATA--CTTCAGGTGCATCTGGAACTAACGCAGCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902742       <-- ACTAAAAACCATATATATATACTTCAGGTGCATCTGGAACTAACGCAGCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX887096       --> ACTAAAAA..........................................  Raphanus sativus var. oleiformis
EY906610       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD947410       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FY452521       --> ACTAAAAATCATATATATA--CTTCAGGTGCATCTGGAACTAACGCAGCT  Raphanus sativus cv GSK3-1
EV536945       --> ACT...............................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FY450220       --> ACTAAAAATCATATATATA--CTTCAGGTGCATCTGGAACTAACGCAGCT  Raphanus sativus cv GSK3-1
FY453736       --> ACTAAAAATCATATATATA--CTTCAGGTGCATCTGGAACTAACGCAGCT  Raphanus sativus cv GSK3-1
EY938455       --> ACTAAAAATCATATATATA--CTTCAG-TGCATCTGGAACTAACGCAGCT  Raphanus sativus cv Early Scarlet Globe
FD541018       --> ACTAAAAACCATATATATA--CTTCAG-TGCATCTGGAACTAACGCAGCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD556629       --> ACTAAAAACCATATTTATA--CTTCAGGTGCATCTGGAACTAACGCAGCT  Raphanus raphanistrum subsp. landra
EY931126       --> ACTAAAAATCATATATATA--CTTCAGGTGCATCTGGAACTAACGCAGCT  Raphanus sativus var. oleiformis

               701    -    751
UN17947        --> GTTATCAGAGGTGCGTTGAGAGCAGAGAGACCAGAGCTTCTTACAGTCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV541286       <-- GTTATCAGAGGTGCGTTGAGAGCAGAGAGGCCAGAGCTTCTTACAGTTAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902742       <-- GTTATCAGAGGTGCGTTGAGAGCAGAGAGGCCAGAGCT--TTACAGTTAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX887096       --> ..................................................  Raphanus sativus var. oleiformis
EY906610       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD947410       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FY452521       --> GTTATCAGAGGTGCGTTGAGAGCAGAGAGACCAGAGCTTCTTACAGTCAT  Raphanus sativus cv GSK3-1
EV536945       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FY450220       --> GTTATCAGAGGTGCGTTGAGAGCAGAGAGACCAGAGCTTCTTACAGTCAT  Raphanus sativus cv GSK3-1
FY453736       --> GTTATCAGAGGTGCGTTGAGAGCAGAGAGACCAGAGCTTCTTACAGTCAT  Raphanus sativus cv GSK3-1
EY938455       --> GTTATCAGAGGTGCGTTGAGAGCAGAGAGACCAGAGCTTCTTACAGTCAT  Raphanus sativus cv Early Scarlet Globe
FD541018       --> GTTATCAG-GGTGCGTTGAGAGCAGAGAGGCCAGAGCT............  Raphanus raphanistrum subsp. raphanistrum (MS)
FD556629       --> GTTATCAGAGGTGCGTTGAGAGCAGAGAGGCCAGAGCTTTTAACAGTCAT  Raphanus raphanistrum subsp. landra
EY931126       --> GTTATCAGAGGTGCGTTGAGAGCAGAGAGACCAGAGCTTCTTACAGTCAT  Raphanus sativus var. oleiformis

               751    -    801
UN17947        --> TTTGCCTCAAAGTTTGAAAAAGCAACCTCCCGAGAGCCAAGAACTCTTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV541286       <-- TTTGCCTCAAAGTTTGAAAAAACAACCTCCCGAGAGCCAAGAACTCTTGT
EY902742       <-- TTTGCCTCAAAGTTTGAAAAAACAACCTCCCGAGAGCCAAGAACTCTTGT
EX887096       --> ..................................................
EY906610       --> ..................................................
FD947410       --> ..................................................
FY452521       --> TTTGCCTCAAAGTTTGAAAAAGCAACCTCCCGAGAGCCAAGAACTCTTGT
EV536945       --> ..................................................
FY450220       --> TTTGCCTCA.........................................
FY453736       --> TTTGCCTCA.........................................
EY938455       --> TTTGCCTCAAAGTTTGAAAA-GCAACCTCTCGAGAGCCAAGAACTCTTGT
FD541018       --> ..................................................
FD556629       --> TTTGCCTCAAAGTTTGAAAAA-CAACCTCCTGAGAGCCAAGAACTCTTGT
EY931126       --> TTTGCCTCAAAGTTTGAAAAAGCAACCTCCCGAGAGCCAAGAACTCTTGT

               801    -    851
UN17947        --> CCAAAGTACAAAACGTGGTAGAAAAGCCACACAATGACCATTTGCCATTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV541286       <-- CCAAAGTACAAAACGTGGTAGAAAAGCCACACAATGACCATTTGCCATTA
EY902742       <-- CCAAAGTACAAAACGTGGTAGAAAAGCCACACAATGACCATTTGCCATTA
EX887096       --> ..................................................
EY906610       --> ..................................................
FD947410       --> ..................................................
FY452521       --> CCAAAGTACAAAACGTGGTAGAAAAGCCACACAATGACCATTTGCCATTA
EV536945       --> ..................................................
FY450220       --> ..................................................
FY453736       --> ..................................................
EY938455       --> CCAAAGTA..........................................
FD541018       --> ..................................................
FD556629       --> C-TAAGTACAAA-CGTGGTAGAAA-G-CACAC-ATGACCATTTGC-ATTA
EY931126       --> CCAAAGTACAAAACGTGGTAGAAAAGCCACACAATGACCATTTGCCATTA

               851    -    901
UN17947        --> CTAGAAGCCAGCAGACTATGCAATATGGACATCATATCACAAGTACAGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV541286       <-- CTAGAAGCAAGCAGACTATGCAATATGGACATCATATCACAAGTACAGCA
EY902742       <-- CTAGAAGCAAGCAGACTATGCAATATGGACATCATATCACAAGTACAGCA
EX887096       --> ..................................................
EY906610       --> ..................................................
FD947410       --> ..................................................
FY452521       --> CTAGAAGCCAGCAGACTATGCAATATGGACATCATATCACAAGTACAGCA
EV536945       --> ..................................................
FY450220       --> ..................................................
FY453736       --> ..................................................
EY938455       --> ..................................................
FD541018       --> ..................................................
FD556629       --> CTAG..............................................
EY931126       --> CTAGAAGCCAGCAGACTATGCAATATGGACATCATATCACAAGTACAGCA

               901    -    951
UN17947        --> AGTAATCTGCTTCGCGTTTCATGACAGTAAGCTTCTCATGGAGACATGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV541286       <-- AGTAATCTGCTTCACGTTTCATGACAGTAAGCTTCTCATGGAGACATGTC
EY902742       <-- AGTAATCTGCTTCGCGTTTCATGACAGTAAGCTTCTCATGGAGACATGTC
EX887096       --> ..................................................
EY906610       --> ..................................................
FD947410       --> ..................................................
FY452521       --> AGTAATCTGCTTtt....................................
EV536945       --> ..................................................
FY450220       --> ..................................................
FY453736       --> ..................................................
EY938455       --> ..................................................
FD541018       --> ..................................................
FD556629       --> ..................................................
EY931126       --> AGTAATCTGCTTTGCGTCTCATGACAGTAAGCTTCTCATGGAGACATGTC

               951    -   1001
UN17947        --> AAGAAGCTAAAAATCTCCGCAAGATCGTCACTCTCTTCTACCTCGATTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV541286       <-- AAGAAGCTAAAAATCTCCGCAAGATCGTCACTCTCTTCTACCTCGATTGA
EY902742       <-- AAGAAGCTAAAAATCTCCGCAAGATCGTCACTCTCTTCTACCTCGATTGA
EX887096       --> ..................................................
EY906610       --> ..................................................
FD947410       --> ..................................................
FY452521       --> ..................................................
EV536945       --> ..................................................
FY450220       --> ..................................................
FY453736       --> ..................................................
EY938455       --> ..................................................
FD541018       --> ..................................................
FD556629       --> ..................................................
EY931126       --> AAGAAGCTAAAA-TCTCCGCAAGATCGTCACTCTCTTCTACCTCGATTGA

               1001   -   1051
UN17947        --> TTCCCCACTT-ATCTTATCTTCTCCCGGGAACACAGGAGGGTGGATACAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV541286       <-- TTCCCCACTT-ATCTTATCTTCTCCCGGGAACACAAGAGGGTGGATACAA
EY902742       <-- TTCCCCACTT-ATCTTATCTTCTCCCGGGAACACAGGAGGATGGATACAA
EX887096       --> ..................................................
EY906610       --> ..................................................
FD947410       --> ..................................................
FY452521       --> ..................................................
EV536945       --> ..................................................
FY450220       --> ..................................................
FY453736       --> ..................................................
EY938455       --> ..................................................
FD541018       --> ..................................................
FD556629       --> ..................................................
EY931126       --> TTCCCCACTTTATCTTATCT-CTCCCGGGA-CACAG-A-GATGGATAC-A

               1051   -   1101
UN17947        --> GTCTCTTTGTAAATTGTGAATCTCTCCCCCATCCACAACATATTCTTTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV541286       <-- GTCTCTTTGTAAATTGTGAATCTCTCCCCCATCCACAACATATTCTTTTG
EY902742       <-- GTCTCTTTGTAAATTGTGAATCTCTCCCCCATCCACAACATATTCTTTTG
EX887096       --> ..................................................
EY906610       --> ..................................................
FD947410       --> ..................................................
FY452521       --> ..................................................
EV536945       --> ..................................................
FY450220       --> ..................................................
FY453736       --> ..................................................
EY938455       --> ..................................................
FD541018       --> ..................................................
FD556629       --> ..................................................
EY931126       --> GTCTCTTTTGTAATTGTGA-TCTCTCCCCatcaca...............

               1101   -   1151
UN17947        --> TCTAAATTTTTGAAAAACCCCATCGTTGTGATTTATAGGATGAATTCTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV541286       <-- TCTAAATTTTTGAAAAACCCCATCGTTGCGATTTATAGGATGAATTCTCT
EY902742       <-- TCTAAATTTTTGAAAAACCCCATCGTTGTGATTTATAGGATGAATTCTCT
EX887096       --> ..................................................
EY906610       --> ..................................................
FD947410       --> ..................................................
FY452521       --> ..................................................
EV536945       --> ..................................................
FY450220       --> ..................................................
FY453736       --> ..................................................
EY938455       --> ..................................................
FD541018       --> ..................................................
FD556629       --> ..................................................
EY931126       --> ..................................................

               1151   -   1201
UN17947        --> ACTATTTGTAACGTTACATTTGTTATAAAATCTATCTTCTCATCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV541286       <-- ACTATTTGTAACGTTACATTTGTTATAAAATCTATCTTCcct....
EY902742       <-- ACTATTTGTAACGTTACATTTGTTATAAAATCTATCTTCTCATCCC
EX887096       --> ..............................................
EY906610       --> ..............................................
FD947410       --> ..............................................
FY452521       --> ..............................................
EV536945       --> ..............................................
FY450220       --> ..............................................
FY453736       --> ..............................................
EY938455       --> ..............................................
FD541018       --> ..............................................
FD556629       --> ..............................................
EY931126       --> ..............................................