RadishBase

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Alignment for radish unigene UN17995

               1      -     51
UN17995        --> GGACTCCAGTGACAAGACACACAACTCTCAATCTGACCAGACATTCACCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD544726       <-- ..................................................
FD977130       <-- ..................................................
FD961401       <-- ..................................................
FD530870       <-- ..................................................
EX753684       <-- ..................................................
EY909923       <-- ..................................................
EX759515       <-- ..................................................
EY903877       <-- ..................................................
EX755432       --> GGACTCCAGTGACAAGACAGACAACTCTCAATCTGACCAGACATTCACCC
EY905809       --> GGACTCCAGTGACAAGACAGACAACTCTCAATCTGACCAGACATTCACCC
EY913740       --> GGACTCCAGTGACAAGACACACAACTCTCAATCTGACCAGACATTCACCC
FD981353       --> GGACTCCAGTGACAAGACACACAACTCTCAATCTGACCAGACATTCACCC
EX763736       --> ......gAGTGACAAGACACACAACTCTCAATCTGACCAGACATTCACCC
EY914738       --> ......gAGTGACAAGACACACAACTCTCAATCTGACCAGACATTCACCC
FD548552       --> .................................gGACCAGACATTCACCC
FD980791       --> ............................................ggACCC
EY908118       --> ..................................................

               51     -    101
UN17995        --> TATCAGGATTCAGAAAGAAGAAGAAGAAGA---TGGAGATAACCCTGAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD544726       <-- ..................................................
FD977130       <-- ..................................................
FD961401       <-- ..................................................
FD530870       <-- ..................................................
EX753684       <-- ..................................................
EY909923       <-- ..................................................
EX759515       <-- ..................................................
EY903877       <-- ..................................................
EX755432       --> TATCAGGATTCAGAAAGAAGAAGAAGA------TGGAGATAACCCTGAAC
EY905809       --> TATCAGGATTCAGAAAGAAGAAGAAGAAGA---TGGAGATAACCCTGAAC
EY913740       --> TATCAGGATTCAGAAAGAAGAAGAAGAAGA---TGGAGATAACCCTGAAC
FD981353       --> TATCAGGATTCAGAAAGAAGAAGAAGAAGA---TGGAGATAACCCTGAAC
EX763736       --> TATCAGGATTCAGAAAGAAGAAGAAGAAGA---TGGAGATAACCCTGAAC
EY914738       --> TATCAGGATTCAGAAAGAAGAAGAAGAAGA---TGGAGATAACCCTGAAC
FD548552       --> TATCAGGATTCAGAAAGAAGAAGAAGAAGA---TGGAGATAACCCTGAAC
FD980791       --> TATCAGGATTCAGAAAGAAGAAGAAGAAGAAGATGGAGATAACCCTGAAC
EY908118       --> ..................................................

               101    -    151
UN17995        --> AGTGGCTACAAGATGCCGATCGTGGGCTTAGGAGTGTGGAGAATGGAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD544726       <-- ..................................................
FD977130       <-- ..................................................
FD961401       <-- ..................................................
FD530870       <-- ..................................................
EX753684       <-- ..................................................
EY909923       <-- ..................................................
EX759515       <-- ..................................................
EY903877       <-- ..................................................
EX755432       --> AGTGGCTACAAGATGCCGATCGTCGGCTTAGGAGTGTGGAGAATGGAGAA
EY905809       --> AGTGGCTACAAGATGCCGATCGTGGGCTTAGGAGTGTGGAGAATGGAGAA
EY913740       --> AGTGGCTACAAGATGCCGATCGTGGGCTTAGGAGTGTGGAGAATGGAGAA
FD981353       --> AGTGGCTACAAGATGCCGATCGTGGGCTTAGGAGTGTGGAGAATGGAGAA
EX763736       --> AGTGGCTACAAGATGCCGATCGTGGGCTTAGGAGTGTGGAGAATGGAGAA
EY914738       --> AGTGGCTACAAGATGCCGATCGTGGGCTTAGGAGTGTGGAGAATGGAGAA
FD548552       --> AGTGGCTACAAGATGCCGATCGTGGGCTTAGGAGTGTGGAGAATGGAGAA
FD980791       --> AGTGGCTACAAGATGCCGATCGTCGGCTTAGGAGTGTGGAGAATGGAGAA
EY908118       --> ..................................................

               151    -    201
UN17995        --> AGAAGGGATTCGAGACCTCATCATCAACTCCATCAAGATCGGCTACCGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD544726       <-- ..................................................
FD977130       <-- ..................................................
FD961401       <-- ..................................................
FD530870       <-- ..................................................
EX753684       <-- ..................................................
EY909923       <-- ..................................................
EX759515       <-- ..................................................
EY903877       <-- ..................................................
EX755432       --> AGAAGGGATTAGAGACCTCATCATCAACTCCATCAAGATCGGCTACCGCC
EY905809       --> GGAAGGGATTCGAGACCTCATCATCAACTCCATCAAGATCGGCTACCGCC
EY913740       --> AGAAGGGATTCGAGACCTCATCATCAACTCCATCAAGATCGGCTACCGCC
FD981353       --> AGAAGGGATTCGAGACCTCATCATCAACTCCATCAAGATCGGCTACCGCC
EX763736       --> AGAAGGGATTCGAGACCTCATCATCAACTCCATCAAGATCGGCTACCGCC
EY914738       --> AGAAGGGATTCGAGACCTCATCATCAACTCCATCAAGATCGGCTACCGCC
FD548552       --> AGAAGGGATTCGAGACCTCATCATCAACTCCATCAAGATCGGCTACCGCC
FD980791       --> AGAAGGGATTCGAGACCTCATCATCAACTCCATTAAGATCGGCTACCGCC
EY908118       --> ..................................................

               201    -    251
UN17995        --> ACCTCGACTGTGCTGCTGATTATAGGAATGAAGCTGAAGTTGGTGAGGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD544726       <-- ..................................................
FD977130       <-- ..................................................
FD961401       <-- ..................................................
FD530870       <-- ..................................................
EX753684       <-- ..................................................
EY909923       <-- ..................................................
EX759515       <-- ..................................................
EY903877       <-- ..................................................
EX755432       --> ACCTCGACTGCGCTGCTGATTATAAGAATGAAGCTGAAGTTGGTGAGGCT
EY905809       --> ACCTCGACTGTGCTGCTGATTATAGGAATGAAGCTGAAGTTGGTGAGGCT
EY913740       --> ACCTCGACTGTGCTGCTGATTATAGGAATGAAGCTGAAGTTGGTGAGGCT
FD981353       --> ACCTCGACTGTGCTGCTGATTATAGGAATGAAGCTGAAGTTGGTGAGGCT
EX763736       --> ACCTCGACTGTGCTGCTGATTATAGGAATGAAGCTGAAGTTGGTGAGGCT
EY914738       --> ACCTCGACTGTGCTGCTGATTATAGGAATGAAGCTGAAGTTGGTGAGGCT
FD548552       --> ACCTCGACTGTGCTGCTGATTATAGGAATGAAGCTGAAGTTGGTGAGGCT
FD980791       --> ACCTCGACTGCGCTGCTGATTATAGGAACGAAGCTGAAGTTGGTGAGGCT
EY908118       --> ........................GGAACGAAGCTGAAGTTGGTGCGGCT

               251    -    301
UN17995        --> CTCTCAGAAGCATTCAAGACTGGTCTAGTCAAAAGAGAGGATCTCTTCGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD544726       <-- ..................................................
FD977130       <-- ..................................................
FD961401       <-- ..................................................
FD530870       <-- ..................................................
EX753684       <-- ..................................................
EY909923       <-- ..................................................
EX759515       <-- ..................................................
EY903877       <-- ..................................................
EX755432       --> CTCTCAGAAGCATTCAAGACTGGTTTAGTCAAGAGAGAGGATCTCTTCGT
EY905809       --> CTCTCAGAAGCATTCAAGACTGGTTTAGTCAAGAGAGAGGATCTCTTCGT
EY913740       --> CTCTCAGAAGCATTCAAGACTGGTCTAGTCAAAAGAGAGGATCTCTTCGT
FD981353       --> CTCTCAGAAGCATTCAAGACTGGTCTAGTCAAAAGAGAGGATCTCTTCGT
EX763736       --> CTCTCAGAAGCATTCAAGACTGGTCTAGTCAAAAGAGAGGATCTCTTCGT
EY914738       --> CTCTCAGAAGCATTCAAGACTGGTCTAGTCAAAAGAGAGGATCTCTTCGT
FD548552       --> CTCTCAGAAGCATTCAAGACTGGTCTAGTCAAAAGAGAGGATCTCTTCGT
FD980791       --> CTCTCAGAAGCATTCAAGACTGGTTTAGTCAAGAGAGAGGATCTCTTCGT
EY908118       --> CTCTCAGAAGCATTCAAGACTGGTTTAGTCAAGAGAGAGGATCTCTTCGT

               301    -    351
UN17995        --> TACAACCAAGCTGTGGAATTCAGACCATGGACATGTAATTGAGGCATGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD544726       <-- ..................................................
FD977130       <-- ..................................................
FD961401       <-- ..................................................
FD530870       <-- ..................................................
EX753684       <-- ..................................................
EY909923       <-- ..................................................
EX759515       <-- ..................................................
EY903877       <-- ..................................................
EX755432       --> TACAACCAAGCTATGGAATTCAGACCATGGACATGTAATTGAGGCTTGCA
EY905809       --> TACAACCAAGCTATGGAATTCAGACCATGGACATGTAATTGAGGCTTGCA
EY913740       --> TACAACCAAGCTGTGGAATTCAGACCATGGACATGTAATTGAGGCATGCA
FD981353       --> TACAACCAAGCTGTGGAATTCAGACCATGGACATGTAATTGAGGCATGCA
EX763736       --> TACAACCAAGCTGTGGAATTCAGACCATGGACATGTAATTGAGGCATGCA
EY914738       --> TACAACCAAGCTGTGGAATTCAGACCATGGACATGTAATTGAGGCATGCA
FD548552       --> TACAACCAAGCTGTGGAATTCAGACCATGGACATGTAATTGAGGCATGCG
FD980791       --> TACAACCAAGCTATGGAATTCAGACCATGGACATGTAATTGAAGCTTGCA
EY908118       --> TACAACCAAGCTATGGAATTCAGACCATGGACATGTAATTGAGGCATGCA

               351    -    401
UN17995        --> AGGACAGTCTGAAGAAACTTCAACTTGATTATCTCGACCTTTACCTCGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD544726       <-- ......................................CTTTACCTCGT-
FD977130       <-- ................................................TT
FD961401       <-- ..................................................
FD530870       <-- ..................................................
EX753684       <-- ..................................................
EY909923       <-- ..................................................
EX759515       <-- ..................................................
EY903877       <-- ..................................................
EX755432       --> AGGACAGTCTGAAGAAACTTCAACTTGATTATCTCGACCTTTACCTCGTT
EY905809       --> AGGACAGTCTGAAAAAACTTCAACTTGATTATCTCGACCTTTACCTCGTT
EY913740       --> AGGACAGTCTGAAGAAACTTCAACTTGATTATCTCGACCTTTACCTCGTT
FD981353       --> AGGACAGTCTGAAGAAACTTCAACTTGATTATCTCGACCTTTACCTCGTT
EX763736       --> AGGACAGTCTGAAGAAACTTCAACTTGATTATCTCGACCTTTACCTCGTT
EY914738       --> AGGACAGTCTGAAGAAACTTCAACTTGATTATCTCGACCTTTACCTCGTT
FD548552       --> AGGACAGTCTGAAGAAACTTCAACTTGATTATCTCGACCTTTACCTCGTT
FD980791       --> AGGACAGTCTGAAGAAACTTCAACTTGATTATCTCGACCTTTACCTCGTT
EY908118       --> AGGACAGTCTGAAGAAACTTCAACTTGATTATCTCGACCTTTACCTCGTT

               401    -    451
UN17995        --> CATTTCCCCGTTGCAACTAGGCACACTGGTGTTGGAACCACGGACAGTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD544726       <-- CATTTCCCCGTTGCAACTAGGCACACTGGTGTTGGAACCACGGACAGTGC
FD977130       <-- CATTTCCCCGTTGCAACTAGGCACACTGGTGTTGGAACCACGGACAGTGC
FD961401       <-- ..aTTCCCCGTTGCAACTAGGCACACTGGTGTTGGAACCACCGACAGTGC
FD530870       <-- ..................................................
EX753684       <-- ..................................................
EY909923       <-- ..................................................
EX759515       <-- ..................................................
EY903877       <-- ..................................................
EX755432       --> CATTTCCCCGTTGCAACTAGGCACACTGGGGTTGGAACCACCGACAGTGC
EY905809       --> CATTTCCCCGTTGCAACTAGGCACACTGGTGTTGGAACCACCGACAGTGC
EY913740       --> CATTTCCCCGTTGCAACTAGGCACACTGGTGTTGGAACCACGGACAGTGC
FD981353       --> CATTTCCCCGTTGCAACTAGGCACACTGGTGTTGGAACCACGGACAGTGC
EX763736       --> CATTTCCCCGTTGCAACTAGGCACACTGGTGTTGGAACCACGGACAGTGC
EY914738       --> CATTTCCCCGTTGCAACTAGGCACACTGGTGTTGGAACCACGGACAGTGC
FD548552       --> CATTTCCCCGTTGCAACTAGGCACACTGGTGTTGGAACCACGGACAGTGC
FD980791       --> CATTTCCCCGTTGCAACTAGGCACACTGGTGTTGGAACCACCGACAGTGC
EY908118       --> CATTTCCCCGTTGCAACTAGGCACACTGGTGTTGGAACCACCGACAGTGC

               451    -    501
UN17995        --> TTTGGGCGATGATGGAGTATTGGACATAGATACGACCATCTCTCTTGAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD544726       <-- TTTGGGCGATGATGGAGTATTGGACATAGATACGACCATCTCTCTTGAAA
FD977130       <-- TTTGGGCGATGATGGAGTATTGGACATAGATACGACCATCTCTCTTGAAA
FD961401       <-- TTTGGGAGATGATGGAGTATTGGACATAGATACTACCATCTCTCTTGAAA
FD530870       <-- .......GATGATGGAGTATTGGACATAGATACTACCATCTCTCTTGAAA
EX753684       <-- .............................................TGAAA
EY909923       <-- ...............................................AAA
EX759515       <-- ..................................................
EY903877       <-- ..................................................
EX755432       --> TTTGGGCACTGATGGAGTATTAGACATAGATACTACCATCTCTCTTGAAA
EY905809       --> TTTGGGAGATGATGGAGTATTGGACATAGATACTACCATCTCTCTTGAAA
EY913740       --> TTTGGGCGATGATGGAGTATTGGACATAGATACGACCATCTCTCTTGAAA
FD981353       --> TTTGGGCGATGATGGAGTATTGGACATAGATACGACCATCTCTCTTGAAA
EX763736       --> TTTGGGCGATGATGGAGTATTGGACATAGATACGACCATCTCTCTTGAAA
EY914738       --> TTTGGGCGATGATGGAGTATTGGACATAGATACGACCATCTCTCTTGAAA
FD548552       --> TTTGGGCGATGATGGAGTATTGGACATAGATACGACCATCTCTCTTGAAA
FD980791       --> TTTGGGAGATGATGGAGTATTGGACATAGATACTACCATCTCTCTTGAAA
EY908118       --> CTTGGGAGATGATGGAGTATTGGACATAGATACTACCATCTCACTTGAAA

               501    -    551
UN17995        --> CTACATGGCATGACATGGAAAAGCTTGTTTCTATGGGTCTCGTCCGCAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD544726       <-- CTACATGGCATGACATGGAAAAGCTTGTTTCTATGGGTCTCGTCCGCAGC
FD977130       <-- CTACATGGCATGACATGGAAAAGCTTGTTTCTATGGGTCTCGTCCGCAGC
FD961401       <-- CTACATGGCATGACATGGAAAAGCTTGTTTCAATGGGTCTCGTCCGCAGC
FD530870       <-- CTACATGGCATGACATGGAAAAGCTTGTTTCAATGGGTCTCGTCCGCAGC
EX753684       <-- CTACATGGCATGACATGGAAAAGCTTGTTTCAATGGGTCTCGTCCGCAGC
EY909923       <-- CTACATGGCATGACATGGAAAAGCTTGTTTCTATGGGTCTCGTCCGCAGC
EX759515       <-- ...............................TATGGGTCTCGTCCGCAGC
EY903877       <-- ..................................................
EX755432       --> CTACATGGCATGACATGGAAAAGCTTGTTTCTATGGGTCTCGTCCGCAGC
EY905809       --> CTACATGGCATGACATGGAAAAGCTTGTTTCTATGGGTCTCGTCCGCAGC
EY913740       --> CTACATGGCATGACATGGAAAAGCTTGTTTCTATGGGTCTCGTCCGCAGC
FD981353       --> CTACATGGCATGACATGGAAAAGCTTGTTTCTATGGGTCTCGTCCGCAGC
EX763736       --> CTACATGGCATGACATGGAAAAGCTTGTTTCTATGGGTCTCGTCCGCAGC
EY914738       --> CTACATGGCATGACATGGAAAAGCTTGTTTCTATGGGTCTCGTCCGCAGC
FD548552       --> CTACATGGCATGACATGGAAAAGCTTGTTTCTATGGGTCTCGTCCGCAGC
FD980791       --> CTACATGGCATGACATGGAAAAGCTTGTTTCTATGGGTCTCGTCCGCAGC
EY908118       --> CTACATGGCATGACATGGAAAAGCTTGTTTCTATGGGTCTCGTCCGCAGC

               551    -    601
UN17995        --> ATTGGAATCAGTAACTATGACGTATTTCTAACGAGGGATTGCTTGGCTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD544726       <-- ATTGGAATCAGTAACTATGACGTATTTCTAACGAGGGATTGCTTGGCTTA
FD977130       <-- ATTGGAATCAGTAACTATGACGTATTTCTAACGAGGGATTGCTTGGCTTA
FD961401       <-- ATTGGAATCAGTAACTATGACGTGTTTCTAACGAGGGATTGCTTGGCTTA
FD530870       <-- ATTGGAATCAGTAACTATGACGTGTTTCTAACGAGGGATTGCTTGGCTTA
EX753684       <-- ATTGGAATCAGTAACTATGACGTGTTTCTAACGAGGGATTGCTTGGCTTA
EY909923       <-- ATTGGAATCAGTAACTATGACGTATTTCTAACGAGGGATTGCTTGACTTA
EX759515       <-- ATTGGAATCAGTAACTATGACGTATTCCTAACGAGGGATTGCTTGGCTTA
EY903877       <-- ..................................................
EX755432       --> ATTGGAATCAGTAACTATGACGTATTCCTAACGAGGGATTGCTTGGCTTA
EY905809       --> ATTGGAAT..........................................
EY913740       --> ATTGGAATCAGTAACTATGACGTATTTCTAACGAGGGATTGCTTGACTTA
FD981353       --> ATTGGAATCAGTAACTATGACGTATTTCTAACGAGGGATTGCTTGGCTTA
EX763736       --> ATTGGAATCAGTAACTATGACGTATTTCTAACGAGGGATTGCTTGGCTTA
EY914738       --> ATTGGAATCAGTAACTATGACGTATTTC......................
FD548552       --> ATTGGAATCAGTAACTATGACGTATTTCTAACGAGGGATTGCTTGGCTTA
FD980791       --> ATTGGAATCAGTAACTATGACGTGTTTCTAACGAGGGATTGCTTGGCTTA
EY908118       --> ATTGGAATCAGTAACTATGACGTGTTTCTAACGAGGGATTGCTTGGCTTA

               601    -    651
UN17995        --> TTCCAAGATCAAGCCAGCGGTGAATCAGATTGAGACGCATCCTTACTTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD544726       <-- TTCCAAGATCAAGCCAGCGGTGAATCAGATTGAGACGCATCCTTACTTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD977130       <-- TTCCAAGATCAAGCCAGCGGTGAATCAGATTGAGACGCATCCTTACTTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD961401       <-- TTCCAAGATAAAGCCAGCGGTGAATCAGATTGAGACGCATCCTTACTTCC  Raphanus raphanistrum subsp. maritimus
FD530870       <-- TTCCAAGATAAAGCCAGCGGTGAATCAGATTGAGACGCATCCTTACTTCC  Raphanus raphanistrum subsp. maritimus
EX753684       <-- TTCCAAGATAAAGCCAGCGGTGAACCAGATTGAGACGCATCCTTACTTCC  Raphanus raphanistrum subsp. maritimus
EY909923       <-- TTCCAAGATCAAGCCAGCGGTGAATCAGATTGAGACGCATCCTTACTTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX759515       <-- TTCCAAGATCAAGCCAGCGGTGAATCAGATTGAGACGCATCCTTACTTTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY903877       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX755432       --> TTCCAAGATCAAGCCAGCGGTGAATCAGATTGAGACGCATCCTTACTTTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY905809       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY913740       --> TTCCAAGATCAAGCCAGCGGTGAATCAGATTGAGACGCATCCTTACTTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD981353       --> TTCCAAGATCAAGCCAGCGGTGAATCAGATTGAGACGCATCCTTACTTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX763736       --> TTCCAAGATCAAGCCAGCGGTGAATCAGATTGAGACGCATCCTTACTTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY914738       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD548552       --> TTCCAAGATCAAGCCAGCGGTGAATCAGATTGAGACGCATCCTTACTTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD980791       --> TTCCAAGATAAAGCCAGCGGTGAATCAGATTGAGACGCATCCTTACTTCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY908118       --> TTCCAAGATCAAGCCAGCGGTGAATCAGAATGAGACGCATCCTTACTTTC  Raphanus raphanistrum subsp. raphanistrum (MS)

               651    -    701
UN17995        --> AACGCGACTCTCTTGTAAAATTCTGCCAGAAGCATGGTATTTGTGTCACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD544726       <-- AACGCGACTCTCTTGTAAAATTCTGCCAGAAGCATGGTATTTGTGTCACA
FD977130       <-- AACGCGACTCTCTTGTAAAATTCTGCCAGAAGCATGGTATTTGTGTCACA
FD961401       <-- AACGCGACTCTCTTGTAAAATTCTGCCAGAAGCATGGTATTTGTGTCACA
FD530870       <-- AACGCGACTCTCTTGTAAAATTCTGCCAGAAGCATGGTATTTGTGTCACA
EX753684       <-- AACGCGACTCTCTTGTAAAATTCTGCCAGAAGCATGGTATTTGTGTCACA
EY909923       <-- AACGCGACTCTCTTGTAAAATTCTGCCAGAAGCATGGTATTTGTGTCACA
EX759515       <-- AACGCGACTTTCTTGTAAAATTCTGCCAGAAGCATGGTATTTGTGTCACA
EY903877       <-- ..................................................
EX755432       --> A-CGCGACTCTCTTGTAAA-TTCTGCCAGAAGCATGGTATTTGTGTCACA
EY905809       --> ..................................................
EY913740       --> AACGCGACTCTCTTGTAAAATTCTGCCAGA-GCATGGTATTTGTGTCACA
FD981353       --> AACGCGACTCTCTTGTAAAATTCTGCCAGAAGCATGGTATTTGTGTCACA
EX763736       --> AACGCGACTCTCTTGTAAAATCCTGCCAGAAGCATGGTATTTGTGTCACA
EY914738       --> ..................................................
FD548552       --> AACGCGACTCTCTTGTAAAATTCTGCCAGAAGCATGGTATTTGTGTCACA
FD980791       --> AACGCGACTCTCTTGTAAAGTTCTGCCAGAAGCATGGTATTTGTGTCACA
EY908118       --> AACGCGACTCTCTTGTAAAATTCTGCCAGAAGCATGGTATTTGTGTCACA

               701    -    751
UN17995        --> GCTCATACTCCTCTCGGAGGTGCCACGGCCAATGCAGAGTGGTTTGGTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD544726       <-- GCTCATACTCCTTTCGGAGGTGCCACGGCCAATGCAGAGTGGTTTGGTAC
FD977130       <-- GCTCATACTCCTCTCGGAGGTGCAACGGCCAATGCAGAGTGGTTTGGTAC
FD961401       <-- TCTCATACTCCTCTCGGAGGTGCCACGGCCAATGCAGAGTGGTTTGGTAC
FD530870       <-- GCTCATACTCCTCTCGGAGGTGCCACGGCCAATGCAGAGTGGTTTGGTAC
EX753684       <-- GCTCATACTCCT--CGGAGGTGCCACGGCCAATGCAGAGTGGTTTGGTAC
EY909923       <-- GCTCATACTCCTCTCGGAGGTGCCACGGCCAATGCAGAGTGGTTTGGTAC
EX759515       <-- GCTCATACTCCTCTCGGAGGTGCCACGGCCAATGCAGAGTGGTTTGGTAC
EY903877       <-- .............TCGGAGGTGCCACGGCCAATGCAGAGTGGTTTGGTAC
EX755432       --> GCTCATACTCCTCT....................................
EY905809       --> ..................................................
EY913740       --> GCTCATACTCCTCTC...................................
FD981353       --> GCTCATACTCCTCTCGGAGtg.............................
EX763736       --> GCTCATACTCCTCTCGGAG-TGCCACGGCCAATGCAGAGT..........
EY914738       --> ..................................................
FD548552       --> GCTCATACTCCTCTCGGAGGTGCCACGGCCAATGCAGAGTGGTTTGGTAC
FD980791       --> GCTCATACTCCTCTCGGAG-TGCCACGGCCAATGCAGAGTGGTTTGGTAC
EY908118       --> GCTCATACTCCTCTCGGAGGTGCCACGGCCAATGCAGAGTGGTTTGGTAC

               751    -    801
UN17995        --> CGTCTCATGTCTCGATGACCCAGCTCTCAAAGAAGTGGCGGAGAAGTACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD544726       <-- CGTTTCATGTCTCGATGACCCAGCTCTCAAAGAAGTGGCGGAGAAGTACA
FD977130       <-- CGTCTCATGTCTCGATGACCCAGCTCTCAAAGAAGTGGCGGAGAAGTACA
FD961401       <-- CGTCTCATGTCTCGATGACCCAGCTCTCAAAGAAGTGGCGGAGAAGTACA
FD530870       <-- CGTCTCATGTCTCGATGACCCAGCTCTCAAAGAAGTGGCGGAGAAGTACA
EX753684       <-- CGTCTCATGTCTCGATGACCCAGCTCTCAAAGAAGTGGCGGAGAAGTACA
EY909923       <-- CGTCTCATGTCTCGATGACCCAGCTCTCAAAGAAGTGGCGGAGAAGTACA
EX759515       <-- CGTTTCATGTCTCGATGACCCTGCTCTCAAAGAAGTGGCGGAGAAGTACA
EY903877       <-- CGTCTCATGTCTCGATGACCCAGCTCTCAAAGAAGTGGCGGAGAAGTACA
EX755432       --> ..................................................
EY905809       --> ..................................................
EY913740       --> ..................................................
FD981353       --> ..................................................
EX763736       --> ..................................................
EY914738       --> ..................................................
FD548552       --> CGTTTCATGTCTCGATGA................................
FD980791       --> CGTCTCATGTCTCGAT..................................
EY908118       --> CGTCTCATGTCTCGATGACCCAGCTCTCAAAGAAGTGGCGGAGAAGTACA

               801    -    851
UN17995        --> AAAAGACAGTGGCACAGGTGGTGCTGAGGTGGGGAATACAGAGGAAGACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD544726       <-- AAAAGACAGTGGCACAGGTGGTGCTGAGGTGGGGAATACAGAGGAAGACA
FD977130       <-- AAAAGACAGTGGCACAGGTGGTGCTGAGGTGGGGAATACAGAGGAAGACA
FD961401       <-- AAAAGACAGCGGCACAGGTGGTGCTGAGGTGGGGAATACAGAGGAAGACA
FD530870       <-- AAAAGACAGCGGCACAGGTGGTGCTGAGGTGGGGAATACAGAGGAAGACA
EX753684       <-- AAAAGACAGCGGCACAGGTGGTGCTGAGGTGGGGAATACAGAGGAAGACA
EY909923       <-- AAAAGACAGTGGCACAGGTGGTGCTGAGGTGGGGAATACAGAGGAAGACA
EX759515       <-- AAAAGACAGTGGCACAGGTGGTTTTGAGGTGGGGAATACAGAGGAACACA
EY903877       <-- AAAAGACAGTGGCACAGGTGGTGCTGAGGTGGG-AATACAGAGGAAGACA
EX755432       --> ..................................................
EY905809       --> ..................................................
EY913740       --> ..................................................
FD981353       --> ..................................................
EX763736       --> ..................................................
EY914738       --> ..................................................
FD548552       --> ..................................................
FD980791       --> ..................................................
EY908118       --> AAAAGACAGTGGCACAGGTGGTGCTGAGGTGGG-AATACAGAGGAAGACA

               851    -    901
UN17995        --> GTGGTGATACCAAAGACATCCAAGGCTGAGAGGTTGGAAGAGAATTTCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD544726       <-- GTGGTGATACCAAAGACATCCAAGGCTGAGAAGTTGGAAGAGAATTTCAA
FD977130       <-- GTGGTGATACCAAAGACATCCAAGGCTGAGAGGTTGGAAGAGAATTTCAA
FD961401       <-- GTGGTGATACCAAAGACATCCAAGGCTGAGAGGTTGGAAGAGAATTTCAA
FD530870       <-- GTGGTGATACCAAAGACATCCAAGGCTGAGAGGTTGGAAGAGAATTTCAA
EX753684       <-- GTGGTGATACCAAAGACATCCAAGGCTGAGAGGTTGGAAGAGAATTTCAA
EY909923       <-- GTGGTGATACCAAAGACATCCAAGGCTGAGAGGTTGGAAGAGAATTTCAA
EX759515       <-- GTGGTGATACCAAAGACATCGAAGGCTGAGAGGTTGGAAGAGAATTTCAA
EY903877       <-- GTGGTGATACCAAAGACATCCAAGGCTGAGAGGTTGGAAGAGAATTTCAA
EX755432       --> ..................................................
EY905809       --> ..................................................
EY913740       --> ..................................................
FD981353       --> ..................................................
EX763736       --> ..................................................
EY914738       --> ..................................................
FD548552       --> ..................................................
FD980791       --> ..................................................
EY908118       --> GTGGTGATACCAAAGACATCCAAGctg.......................

               901    -    951
UN17995        --> GGTTTTCGACTTCGAGCTGACGAAAGAGGACATGGAGGTGATCAAGAGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD544726       <-- GGTTTTCGACTTCGAGCTGACCAAAGAGGACATGGAGGTGATCAAGAGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD977130       <-- GTTTTTCGACTTCGAGCTGACCAAAGAGGACATGGAGGTGATCAAGAGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD961401       <-- GGTTTTCGACTTCGAGCTGACGAAAGAGGACATGGAGGTGATCAAGAGCA  Raphanus raphanistrum subsp. maritimus
FD530870       <-- GGTTTTCGACTTCGAGCTGACGAAAGAGGACATGGAGGTGATCAAGAGCA  Raphanus raphanistrum subsp. maritimus
EX753684       <-- GGTTTTCGACTTCGAGCTGACGAAAGAGGACATGGAGGTGATCAAGAGCA  Raphanus raphanistrum subsp. maritimus
EY909923       <-- GGTTTTCGACTTCGAGCTGACCAAAGAGGACATGGAGGTGATCAAGAGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX759515       <-- GGTTTTCGACTTCGAGCTGACGAAAGAGGACATGGAGGTGATCAAGAGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY903877       <-- GGTTTTCGACTTCGAACTGACGAAAGAGGACATGGAGGTGATCAAGAGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX755432       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY905809       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY913740       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD981353       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX763736       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY914738       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD548552       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD980791       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY908118       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               951    -   1001
UN17995        --> TGGACAGGAAGTACCGTACGAACCAACCGGCCAAGTTTTGGGGGATTGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD544726       <-- TGGACAGGAAGTACCGTACTAACCAACCGGCCAAGTTTTGGGGGATTGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD977130       <-- TGGACAGGAAGTACCGTACTAACCAACCGGCCAAGTTTTGGGGGATTGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD961401       <-- TGGACGGGAAGTACCGTACGAACCAACCGGCCAAGTTTTGGGGGATTGAT  Raphanus raphanistrum subsp. maritimus
FD530870       <-- TGGACAGGAAGTACCGTACGAACCAACCGGCCAAGTTTTGGGGGATTGAT  Raphanus raphanistrum subsp. maritimus
EX753684       <-- TGGACAGGAAGTACCGTACGAACCAACCGGCCAAGTTTTGGGGGATTGAT  Raphanus raphanistrum subsp. maritimus
EY909923       <-- TGGACAGGAAGTACCGTACTAACCAACCGGCCAAGTTTTGGGGGATTGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX759515       <-- TGGACAGGAAGTACCGTACGAACCAACCAGCCAAGTTTTGGGGGATTGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY903877       <-- TGGACAGGAAGTACCGTACGAACCAACCAGCCAAGTTTTGGGGGATTGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX755432       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY905809       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY913740       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD981353       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX763736       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY914738       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD548552       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD980791       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY908118       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               1001   -   1051
UN17995        --> CTCTACGCTTGAATGAATAGAATGATCACCACCGCTCTTGTCTCTCTCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD544726       <-- CTCTACGCTTGAATGAAAAGAATGATCACCACCGCTCTTGTCTCTCTCAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD977130       <-- CTCTACGCTTGAATGAAAAGAATGATCACCACCGCTCTTGTCTCTCTCAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD961401       <-- CTCTACGCTTGAATGAATAGAATGATCACCACCGCTCTTGTCTCTAT-AT  Raphanus raphanistrum subsp. maritimus
FD530870       <-- CTCTACGCTTGAATGAATAGAATGATCACCACCGCTCTTGTCTCTAT-AT  Raphanus raphanistrum subsp. maritimus
EX753684       <-- CTCTACGCTTGAATGAATAGAATGATCACCACCGCTCTTGTCTCTAT-AT  Raphanus raphanistrum subsp. maritimus
EY909923       <-- CTCTACGCTTGAATGAAAAGAATGATCACCACCGCTCTTGTCTCTCTCAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX759515       <-- CTTTACGCTTGAATGAATAGAATGATCACCACCGCTCTTGTCTCTCTCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY903877       <-- CTCTACGCTTGAATGAATAGAATGATCACCACCGCTCTTGTCTCTCTCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX755432       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY905809       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY913740       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD981353       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX763736       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY914738       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD548552       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD980791       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY908118       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               1051   -   1101
UN17995        --> GAATAAGAGAAGAAGCTAAGGCGT-TTAGCTTCTTCACCTGTGGGACATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD544726       <-- GAATAAGAGAAGAAGCTAAGGCGT-TTAGCTTCTTCACCTGTGGGACATT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD977130       <-- GAATAAGAGAAGAGGCTAAGGCGT-TTAGCTTCTTCACCTGTGGGACATT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD961401       <-- GAATAAGAAAAGAAGCTAAGCCGTAGTAGCTTCTTCACCTGTGGGACATT  Raphanus raphanistrum subsp. maritimus
FD530870       <-- GAATAAGAAAAGAAGCTAAGCCGTAGTAGCTTCTTCACCTGTGGGACATT  Raphanus raphanistrum subsp. maritimus
EX753684       <-- GAATAAGAAAAGAAGCTAAGCCGTAGTAGCTTCTTCACCTGTGGGACATT  Raphanus raphanistrum subsp. maritimus
EY909923       <-- GAATAAGAGAAGAAGCTAAGGCGT-TTAGCTTCTTCACCTGTGGGACATT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX759515       <-- GAATAAGAGAAGAAGCTAAGGCGT-TTAGCTTCTTCACCTGTGGGACATT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY903877       <-- GAATAAGAGAAGAAGCTAAGGCGT-TTAGCTTCTTCACCTGTGGGACATT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX755432       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY905809       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY913740       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD981353       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX763736       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY914738       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD548552       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD980791       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY908118       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               1101   -   1151
UN17995        --> CTCAATGGTTGTGAACCTATTTTATTTAAAACTCGTATGTTGAACATGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD544726       <-- CTCAATGGTTGTGAACCTACTTTATTTAAAACTCGTATGTTGAACATGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD977130       <-- CTCAATGGTTGTGAACCTACTTTATTTAAAACTCGTATGTTGAACATGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD961401       <-- CTCAATGGTTGTGAACCTATTTTATTTAAAACTCGTATGTTGAACATGTT  Raphanus raphanistrum subsp. maritimus
FD530870       <-- CTCAATGGTTGTGAACCTATTTTATTTAAAACTCGTATGTTGAACATGTT  Raphanus raphanistrum subsp. maritimus
EX753684       <-- CTCAATGGTTGTGAACCTATTTTATTTAAAACTCGTATGTTGAACATGTT  Raphanus raphanistrum subsp. maritimus
EY909923       <-- CTCAATGGTTGTGAACCTACTTTATTTAAAACTCGTATGTTGAACATGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX759515       <-- CTCAATGGTTGTGAACCTACTTTATTTAAAACTCGTATGTTGAgc.....  Raphanus raphanistrum subsp. raphanistrum (MS)
EY903877       <-- CTCAATGGTTGTGAACCTATTTTATTTAAAACTCGTATGTTGAACATTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX755432       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY905809       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY913740       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD981353       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX763736       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY914738       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD548552       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD980791       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY908118       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               1151   -   1201
UN17995        --> ATGGTTTTTAATATCACTCACATTTGATTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD544726       <-- ATGGTTTTTAATATCACTCACATTTGATgc.  Raphanus raphanistrum subsp. raphanistrum (NY)
FD977130       <-- ATGGTTTTTAATATCACTCACATTTGATgc.  Raphanus raphanistrum subsp. raphanistrum (NY)
FD961401       <-- ATGGTTTTCAATATCACTCACATTTGATTGC  Raphanus raphanistrum subsp. maritimus
FD530870       <-- ATGGTTTTCAATATCACTCACATTTGATTG.  Raphanus raphanistrum subsp. maritimus
EX753684       <-- ATGGTTCTCAATATCACTCACATTTGATTGg  Raphanus raphanistrum subsp. maritimus
EY909923       <-- ATGGTTTTTAATATCACTCACATTTGATgc.  Raphanus raphanistrum subsp. raphanistrum (NY)
EX759515       <-- ...............................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY903877       <-- ATGGTTTTTAATATTACTCACATTTGATgc.  Raphanus raphanistrum subsp. raphanistrum (MS)
EX755432       --> ...............................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY905809       --> ...............................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY913740       --> ...............................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD981353       --> ...............................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX763736       --> ...............................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY914738       --> ...............................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD548552       --> ...............................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD980791       --> ...............................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY908118       --> ...............................  Raphanus raphanistrum subsp. raphanistrum (MS)