1      -     51
UN18000        --> GGGCATCTCACTCTCT-CTAACACACACAACATTTAATCTCAGCCGTTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574300       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD982888       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX752178       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX753359       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY894282       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD937253       <-- ..................................................  Raphanus sativus var. oleiformis
FD568070       <-- ..................................................  Raphanus sativus var. oleiformis
EY917792       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD976132       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD986679       --> GGGCATCTCACTCTCTTCTAACACACACAACATTTAATCTCAGCCGTTCG  Raphanus raphanistrum subsp. landra
EX758243       --> ..ggATCTCACTCTCT-CTAACACACACAACATTTAATCTCAGCCGTTCG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX748154       --> ...................AACACACACAACATTTAATCTCAGCCGCTCG  Raphanus raphanistrum subsp. maritimus
EX749748       --> ...................AACACACACAACATTTAATCTCAGCCGCTCG  Raphanus raphanistrum subsp. maritimus
EY898138       --> ...................AACACACACAACATTTAATCTCAGCCGCTCG  Raphanus raphanistrum subsp. maritimus
FY443085       --> ..............................CATTTAATCTCAGCCGTTCC  Raphanus sativus cv GSK3-1
EV569856       --> ......................................gTCAGCCGTTCG  Raphanus raphanistrum subsp. landra
FY447574       --> .......................................TCAGCCGTTC-  Raphanus sativus cv GSK3-1
EY921686       --> ..................................................  Raphanus raphanistrum subsp. landra
FD564631       --> ..................................................  Raphanus sativus var. oleiformis
FD940690       --> ..................................................  Raphanus sativus var. oleiformis
FY444463       --> ..................................................  Raphanus sativus cv GSK3-1
FD980207       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD958233       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FY442953       --> ..................................................  Raphanus sativus cv GSK3-1
FY445484       --> ..................................................  Raphanus sativus cv GSK3-1
FD938389       --> ..................................................  Raphanus sativus var. oleiformis

               51     -    101
UN18000        --> ATCTTCCTCCCATCATGCCGATCAGAAACATCGCCGTTGGCCGTCCCGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574300       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD982888       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX752178       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX753359       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY894282       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD937253       <-- ..................................................  Raphanus sativus var. oleiformis
FD568070       <-- ..................................................  Raphanus sativus var. oleiformis
EY917792       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD976132       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD986679       --> ATCTCTCTCCCATCATGCCGATCAGAAACATCGCCGTTGGCCGTCCCGAC  Raphanus raphanistrum subsp. landra
EX758243       --> ATCTCTCTCCCATCATGCCGATCAGGAACATCGCCGTTGGCCGTCCCGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX748154       --> ATCTTCCTCCCATCATGCCGATCAGAAACATCGCCGTTGGCCGTCCCGAT  Raphanus raphanistrum subsp. maritimus
EX749748       --> ATCTTCCTCCCATCATGCCGATCAGAAACATCGCCGTTGGCCGTCCCGAT  Raphanus raphanistrum subsp. maritimus
EY898138       --> ATCTTCCTCCCATCATGCCGATCAGAAACATCGCCGTTGGCCGTCCCGAT  Raphanus raphanistrum subsp. maritimus
FY443085       --> ATCTTCCTCCCATCATGCCGATCAGAAACATCGCCGTTGGCCGTCCCGAT  Raphanus sativus cv GSK3-1
EV569856       --> ATCTCTCTCCCATCATGCCAATCAGAAACATCGCCGTTGGCCGTCCCGAC  Raphanus raphanistrum subsp. landra
FY447574       --> ATCTTCCTCCCATCATGCCGATCAGAAACATCGCCGTTGGCCGTCCCGAT  Raphanus sativus cv GSK3-1
EY921686       --> ............ggATGCCGATCAGAAACATCGCCGTTGGCCGTCCCGAC  Raphanus raphanistrum subsp. landra
FD564631       --> ..................................................  Raphanus sativus var. oleiformis
FD940690       --> ..................................................  Raphanus sativus var. oleiformis
FY444463       --> ..................................................  Raphanus sativus cv GSK3-1
FD980207       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD958233       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FY442953       --> ..................................................  Raphanus sativus cv GSK3-1
FY445484       --> ..................................................  Raphanus sativus cv GSK3-1
FD938389       --> ..................................................  Raphanus sativus var. oleiformis

               101    -    151
UN18000        --> GAGGCCACCCGTCCCGACGCCTTAAAGGCGGCGTTGGCTGAGTTCATATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574300       <-- ...............................CGTTGGCTGAGTTCATATC  Raphanus raphanistrum subsp. landra
FD982888       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX752178       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX753359       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY894282       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD937253       <-- ..................................................  Raphanus sativus var. oleiformis
FD568070       <-- ..................................................  Raphanus sativus var. oleiformis
EY917792       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD976132       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD986679       --> GAGGCCACCCGTCCCGACGCCTTAAAGGCGGCGTTGGCTGAGTTCATATC  Raphanus raphanistrum subsp. landra
EX758243       --> GAGGCCACCCGCCCCGACGCCTTGAAGGCGGCGTTGGCTGAGTTCATATC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX748154       --> GAGGCCACCCGTCCCGACGCCTTGAAGGCAGCGTTGGCTGGGTTCATATC  Raphanus raphanistrum subsp. maritimus
EX749748       --> GAGGCCACCCGTCCCGACGCCTTGAAGGCAGCGTTGGCTGAGTTCATATC  Raphanus raphanistrum subsp. maritimus
EY898138       --> GAGGCCACCCGTCCCGACGCCTTGAAGGCAGCGTTGGCTGAGTTCATATC  Raphanus raphanistrum subsp. maritimus
FY443085       --> GAAGCCACCCGCCCCGACGCCTTAAAGGCGGCGTTGGCTGAGTTCATATC  Raphanus sativus cv GSK3-1
EV569856       --> GAGGCCACCCGTCCCGACGCCTTAAAGGCGGCGTTGGCTGAGTTCATATC  Raphanus raphanistrum subsp. landra
FY447574       --> GAAGCCACCCGCCCCGACGCCTTAAAGGCGGCGTTGGCTGAGTTCATATC  Raphanus sativus cv GSK3-1
EY921686       --> GAGGCCACCCGTCCCGACGCCTTAAAGGCGGCGTTGGCTGAGTTCATATC  Raphanus raphanistrum subsp. landra
FD564631       --> ..................................................  Raphanus sativus var. oleiformis
FD940690       --> ..................................................  Raphanus sativus var. oleiformis
FY444463       --> ..................................................  Raphanus sativus cv GSK3-1
FD980207       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD958233       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FY442953       --> ..................................................  Raphanus sativus cv GSK3-1
FY445484       --> ..................................................  Raphanus sativus cv GSK3-1
FD938389       --> ..................................................  Raphanus sativus var. oleiformis

               151    -    201
UN18000        --> AACTATGATCTTTGTCTTCGCCGGCTCAGGCTCAGGAATGGCTTTCAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574300       <-- AACTATGATCTTCGTCTTCGCCGGCTCAGGCTCAGGAATGGCTTTCAACA  Raphanus raphanistrum subsp. landra
FD982888       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX752178       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX753359       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY894282       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD937253       <-- ..................................................  Raphanus sativus var. oleiformis
FD568070       <-- ..................................................  Raphanus sativus var. oleiformis
EY917792       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD976132       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD986679       --> AACTATGATCTTCGTCTTCGCCGGCTCAGGCTCAGGAATGGCTTTCAACA  Raphanus raphanistrum subsp. landra
EX758243       --> AACTATGATCTTTGTCTTCGCCGGCTCAGGCTCCGGAATGGCTTTCAACA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX748154       --> AACTATGATCTTTGTCTTCGCCGGCTCAGGCTCCGGAATGGCTTTCAACA  Raphanus raphanistrum subsp. maritimus
EX749748       --> AACTATGATCTTTGTCTTCGCCGGCACAGGCTCCGGAATGGCTTTCAACA  Raphanus raphanistrum subsp. maritimus
EY898138       --> AACTATGATCTTTGTCTTCGCCGGCTCAGGCTCCGGAATGGCTTTCAACA  Raphanus raphanistrum subsp. maritimus
FY443085       --> AACTATGATCTTTGTCTTCGCCGGCTCAGGCTCAGGAATGGCTTTCAACA  Raphanus sativus cv GSK3-1
EV569856       --> AACTATGATCTTCGTCTTCGCCGGCTCAGGCTCAGGAATGGCTTTCAACA  Raphanus raphanistrum subsp. landra
FY447574       --> AACTATGATCTTTGTCTTCGCCGGCTCAGGCTCAGGAATGGCTTTCAACA  Raphanus sativus cv GSK3-1
EY921686       --> AACTATGATCTTCGTCTTCGCCGGCTCAGGCTCAGGAATGGCTTTCAACA  Raphanus raphanistrum subsp. landra
FD564631       --> ..................................................  Raphanus sativus var. oleiformis
FD940690       --> ..................................................  Raphanus sativus var. oleiformis
FY444463       --> ..................................................  Raphanus sativus cv GSK3-1
FD980207       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD958233       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FY442953       --> ..................................................  Raphanus sativus cv GSK3-1
FY445484       --> ..................................................  Raphanus sativus cv GSK3-1
FD938389       --> ..................................................  Raphanus sativus var. oleiformis

               201    -    251
UN18000        --> AGCTCACTGAAAACGGTGCCACCACTCCC-G-CCGGCCTCGTAGCCGCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574300       <-- AGCTCACTGAAAACGGTGCCACCACTCCCCGCCCGGCCTCGTAGCCGCCT
FD982888       <-- ..................................................
EX752178       <-- ..................................................
EX753359       <-- ..................................................
EY894282       <-- ..................................................
FD937253       <-- ..................................................
FD568070       <-- ..................................................
EY917792       <-- ..................................................
FD976132       <-- ..................................................
FD986679       --> AGCTCACTGAAAACGGTGCCACCACTCCC-G-CCGGCCTCGTAGCCGCCT
EX758243       --> AGCTCACTGAAAACGGTGCCACCACTCCC-G-CCGGCCTCGTAGCCGCCT
EX748154       --> AGCTCACTGAAAACGGTGCCACCACTCCC-G-CCGGCCTCGTAGCCGCCT
EX749748       --> AGCTCACTGAAAACGGTGCCACCACTCCC-G-CCGGCCTCGTAGCCGCCT
EY898138       --> AGCTCACTGAAAACGGTGCCACCACTCCC-G-CCGGCCTCGTAGCCGCCT
FY443085       --> AGCTCACTGAAAACGGTGCCACCACTCCC-G-CCGGCCTCGTAGCCGCCT
EV569856       --> AGCTCACTGAAAACGGTGCCACCACTCCC-G-CCGGCCTCGTAGCCGCCT
FY447574       --> AGCTCACTGAAAACGGTGCCACCACTCCC-G-CCGGCCTCGTAGCCGCCT
EY921686       --> AGCTCACTGAAAACGGTGCCACCACTCCC-G-CCGGCCTCGTAGCCGCCT
FD564631       --> ..................................................
FD940690       --> ..................................................
FY444463       --> ..................................................
FD980207       --> ..................................................
FD958233       --> ..................................................
FY442953       --> ..................................................
FY445484       --> ..................................................
FD938389       --> ..................................................

               251    -    301
UN18000        --> CACTGGCTCACGCTTTTGGACTCTTTGTCGCCGTCTCCGTCGGCGCCAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574300       <-- CACTGGCTCACGCTTTCGGACTCTTTGTCGCCGTCTCCGTCGGCGCCAAC  Raphanus raphanistrum subsp. landra
FD982888       <-- .............................................CCAAC  Raphanus raphanistrum subsp. landra
EX752178       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX753359       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY894282       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD937253       <-- ..................................................  Raphanus sativus var. oleiformis
FD568070       <-- ..................................................  Raphanus sativus var. oleiformis
EY917792       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD976132       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD986679       --> CACTGGCTCACGCTTTCGGACTCTTTGTCGCCGTCTCCGTCGGCGCCAAC  Raphanus raphanistrum subsp. landra
EX758243       --> CACTGGCACACGCTTTCGGACTCTTTGTCGCCGTCTCCGTCGGCGCCAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX748154       --> CACTGGCCCACGCTTTTGGACTCTTTGTCGCCGTCTCCGTCGGCGCCAAC  Raphanus raphanistrum subsp. maritimus
EX749748       --> CACTGGCCCACGCTTTTGGACTCTTTGTCGCCGTCTCCGTCGGCGCCAAC  Raphanus raphanistrum subsp. maritimus
EY898138       --> CACTGGCCCACGCTTTTGGACTCTTTGTCGCCGTCTCCGTCGGCACCAAC  Raphanus raphanistrum subsp. maritimus
FY443085       --> CACTGGCGCACGCTTTTGGACTCTTTGTCGCCGTCTCCGTCGGCGCCAAC  Raphanus sativus cv GSK3-1
EV569856       --> CACTGGCTCACGCTTTCGGACTCTTTGTCGCCGTCTCCGTCGGCGCCAAC  Raphanus raphanistrum subsp. landra
FY447574       --> CACTGGCGCACGCTTTTGGACTCTTTGTCGCCGTCTCCGTCGGCGCCAAC  Raphanus sativus cv GSK3-1
EY921686       --> CACTGGCTCACGCTTTCGGACTCTTTGTCGCCGTCTCCGTCGGCGCCAAC  Raphanus raphanistrum subsp. landra
FD564631       --> ..................................................  Raphanus sativus var. oleiformis
FD940690       --> ..................................................  Raphanus sativus var. oleiformis
FY444463       --> ..................................................  Raphanus sativus cv GSK3-1
FD980207       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD958233       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FY442953       --> ..................................................  Raphanus sativus cv GSK3-1
FY445484       --> ..................................................  Raphanus sativus cv GSK3-1
FD938389       --> ..................................................  Raphanus sativus var. oleiformis

               301    -    351
UN18000        --> ATCTCCGGTGGACACGTCAACCCCGCCGTCACGTTCGGCGCTTTTGTTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574300       <-- ATCTCAGGTGGACACGTCAACCCCGCCGTCACGTTCGGCGCTTTCGTTGG  Raphanus raphanistrum subsp. landra
FD982888       <-- ATCTCAGGTGGACACGTCAACCCCGCCGCCACGTTCGGCGCTTTCGTTGG  Raphanus raphanistrum subsp. landra
EX752178       <-- ..........GACACGTCAACCCCGCCGTCACGTTCGGCGCTTTTGTTGG  Raphanus raphanistrum subsp. maritimus
EX753359       <-- .......................................cgcTTTGTTGG  Raphanus raphanistrum subsp. maritimus
EY894282       <-- ...........................................TTGTTGG  Raphanus raphanistrum subsp. maritimus
FD937253       <-- ..................................................  Raphanus sativus var. oleiformis
FD568070       <-- ..................................................  Raphanus sativus var. oleiformis
EY917792       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD976132       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD986679       --> ATCTCAGGTGGACACGTCAACCCCGCCGCCACGTTCGGCGCTTTCGTTGG  Raphanus raphanistrum subsp. landra
EX758243       --> ATCTCCGGTGGACACGTTAACCCTGCCGTCACTTTCGGCGCTTTCGTAGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX748154       --> ATCTCCGGTGGACACGTCAACCCCGCCGTCACGTTCGGCGCTTTTGTTGG  Raphanus raphanistrum subsp. maritimus
EX749748       --> ATCTCCGGTGGACACGTCAACCCCGCCGTCACGTTCGGCGCTTTTGTTGG  Raphanus raphanistrum subsp. maritimus
EY898138       --> ATCTCCGGTGGACACGTCAACCCCGCCGTCACGTTCGTCGCTTTTGTTGG  Raphanus raphanistrum subsp. maritimus
FY443085       --> ATCTCCGGTGGACACGTTAACCCTGCCGTCACTTTTGGCGCTTTTGTAGG  Raphanus sativus cv GSK3-1
EV569856       --> ATCTCAGGTGGACACGTCAACCCCGCCGTCACGTTCGGCGCTTTCGTTGG  Raphanus raphanistrum subsp. landra
FY447574       --> ATCTCCGGTGGACACGTTAACCCTGCCGTCACTTTTGGCGCTTTTGTAGG  Raphanus sativus cv GSK3-1
EY921686       --> ATCTCAGGTGGACACGTCAACCCCGCCGTCACGTTCGGCGCTTTCGTTGG  Raphanus raphanistrum subsp. landra
FD564631       --> ..................................................  Raphanus sativus var. oleiformis
FD940690       --> ..................................................  Raphanus sativus var. oleiformis
FY444463       --> ..................................................  Raphanus sativus cv GSK3-1
FD980207       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD958233       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FY442953       --> ..................................................  Raphanus sativus cv GSK3-1
FY445484       --> ..................................................  Raphanus sativus cv GSK3-1
FD938389       --> ..................................................  Raphanus sativus var. oleiformis

               351    -    401
UN18000        --> TGGCAACATCACTCTCCTCCGTGGTATACTCTACTGGATTGCTCAGCTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574300       <-- TGGTAACATCACCCTCCTCCGTGGTATACTCTACTGGATTGCTCAGCTAC  Raphanus raphanistrum subsp. landra
FD982888       <-- TGGTAACATCACTCTCCTCCGTGGTATACTCTACTGGATTGCTCAGCTAC  Raphanus raphanistrum subsp. landra
EX752178       <-- TGGCAACATCACTCTTCTCCGCGGTATACTCTACTGGATTGCTCAGCTAC  Raphanus raphanistrum subsp. maritimus
EX753359       <-- TGGCAACATCACTCTTCTCCGCGGTATACTCTACTGGATTGCTCAGCTAC  Raphanus raphanistrum subsp. maritimus
EY894282       <-- TGGCAACATCACTCTTCTCCGCGGTATACTCTACTGGATTGCTCAGCTAC  Raphanus raphanistrum subsp. maritimus
FD937253       <-- ..................................................  Raphanus sativus var. oleiformis
FD568070       <-- ..................................................  Raphanus sativus var. oleiformis
EY917792       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD976132       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD986679       --> TGGTAACATCACTCTCCTCCGTGGTATACTCTACTGGATTGCTCAGCTAC  Raphanus raphanistrum subsp. landra
EX758243       --> TGGCAACATCACTCTCCTCCGTGGTATACTCTACTGGATTGCTCAGCTAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX748154       --> TGGCAACATCACTCTTCTCCGCGGTATACTCTACTGGATTGCTCAGCTAC  Raphanus raphanistrum subsp. maritimus
EX749748       --> TGGCAACATCACTCTTCTCCGCGGTATACTCTACTGGATTGCTCAGCTAC  Raphanus raphanistrum subsp. maritimus
EY898138       --> TGGCAACATCACTCTTCTCCGCGGTATACTCTACTGGATTGCTCAGCTAC  Raphanus raphanistrum subsp. maritimus
FY443085       --> TGGCAACATCACTCTCCTCCGTGGTATACTCTACTGGATTGCCCAGCTAC  Raphanus sativus cv GSK3-1
EV569856       --> TGGTAACATCACCCTCCTCCGTGGTATACTCTACTGGATTGCTCAGCTAC  Raphanus raphanistrum subsp. landra
FY447574       --> TGGCAACATCACTCTCCTCCGTGGTATACTCTACTGGATTGCCCAGCTAC  Raphanus sativus cv GSK3-1
EY921686       --> TGGTAACATCACTCTCCTCCGTGGTATACTCTACTGGATTGCTCAGCTAC  Raphanus raphanistrum subsp. landra
FD564631       --> ..................................................  Raphanus sativus var. oleiformis
FD940690       --> ..................................................  Raphanus sativus var. oleiformis
FY444463       --> ..................................................  Raphanus sativus cv GSK3-1
FD980207       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD958233       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FY442953       --> ..................................................  Raphanus sativus cv GSK3-1
FY445484       --> ..................................................  Raphanus sativus cv GSK3-1
FD938389       --> ..................................................  Raphanus sativus var. oleiformis

               401    -    451
UN18000        --> TTGGCTCAGTCGTTGCTTGTCTCCTCCTCAAGTTCGCCACCGGCGGTTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574300       <-- TCGGCTCAGTCGTTGCTTGTCTCCTCCTCAAGTTCACCACCGGCGGTTTG  Raphanus raphanistrum subsp. landra
FD982888       <-- TCGGCTCAGTCGTTGCTTGTCTCCTCCTCAAGTTCGCCACCGGCGGTTTG  Raphanus raphanistrum subsp. landra
EX752178       <-- TTGGCTCAGTCGTTGCTTGTCTCCTCCTCAAGTTCGCCACCGGCGGTTTG  Raphanus raphanistrum subsp. maritimus
EX753359       <-- TTGGCTCAGTCGTTGCTTGTCCCCTCCTCAAGTTCGCCACCGGCGGTTTG  Raphanus raphanistrum subsp. maritimus
EY894282       <-- TTGGCTCAGTCGTTGCTTGTCTCCTCCTCAAGTTCGCCACCGGCGGTTTG  Raphanus raphanistrum subsp. maritimus
FD937253       <-- ..................................................  Raphanus sativus var. oleiformis
FD568070       <-- ..................................................  Raphanus sativus var. oleiformis
EY917792       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD976132       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD986679       --> TCGGCTCAGTCGTTGCTTGTCTCCTCCTCAAGTTCGCCACCGGCGGTTTG  Raphanus raphanistrum subsp. landra
EX758243       --> TCGGCTCAGTCGTTGCTTGTCTCCTCCTCAAGTTCGCCACCGGCGGTCTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX748154       --> TTGGCTCAGTCGTTGCTTGTCTCCTCCTCAAGTTCGCCACCGGCGGTTTG  Raphanus raphanistrum subsp. maritimus
EX749748       --> TTGGCTCAGTCGTTGCTTGTCCCCTCCTCAAGTTCGCCACCGGCGGTTTG  Raphanus raphanistrum subsp. maritimus
EY898138       --> TTGGCTCAGTCGTTGCTTGTCTCCTCCTCAAGTTCGCCACCGGCGGTTTG  Raphanus raphanistrum subsp. maritimus
FY443085       --> TTGGCTCAGTCGTTGCTTGTCTCCTCCTCAAGTTCGCCACCGGCGGTTTG  Raphanus sativus cv GSK3-1
EV569856       --> TCGGCTCAGTCGTTGCTTGTCTCCTCCTCAAGTTCACCACCGGCGGTTTG  Raphanus raphanistrum subsp. landra
FY447574       --> TTGGCTCAGTCGTTGCTTGTCTCCTCCTCAAGTTCGCCACCGGCGGTTTG  Raphanus sativus cv GSK3-1
EY921686       --> TCGGCTCAGTCGTTGCTTGTCTCCTCCTCAAGTTCGCCACCGGCGGTTTG  Raphanus raphanistrum subsp. landra
FD564631       --> ..................................................  Raphanus sativus var. oleiformis
FD940690       --> ..................................................  Raphanus sativus var. oleiformis
FY444463       --> ..................................................  Raphanus sativus cv GSK3-1
FD980207       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD958233       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FY442953       --> ..................................................  Raphanus sativus cv GSK3-1
FY445484       --> ..................................................  Raphanus sativus cv GSK3-1
FD938389       --> ..................................................  Raphanus sativus var. oleiformis

               451    -    501
UN18000        --> GTTGTGCCGGCTTTTGGCCTCTCCGCCGGAGTAGGAGTGTCCAACGCTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574300       <-- GCTGTGCCGGCTTTTGGCCTCTCCGCCGGAGTAGGAGTGTCCAACGCTTT  Raphanus raphanistrum subsp. landra
FD982888       <-- GCTGTGCCGGCTTTTGGCCTCTCCGCCGGAGTAGGAGTGTCCAACGCTTT  Raphanus raphanistrum subsp. landra
EX752178       <-- GTTGTGCCGGCTTTTGGCCTCTCCACCGGAGTAGGAGTGTCCAACGCTTT  Raphanus raphanistrum subsp. maritimus
EX753359       <-- GTTGTGCCGGCTTTTGGCCTCTCCACCGGAGTAGGAGTGTCCAACGCTTT  Raphanus raphanistrum subsp. maritimus
EY894282       <-- GTTGTGCCGGCTTTTGGCCTCTCCACCGGAGTAGGAGTGTCCAACGCTTT  Raphanus raphanistrum subsp. maritimus
FD937253       <-- ..........................CGGAGTAGGAGTGTCCAACGCTTT  Raphanus sativus var. oleiformis
FD568070       <-- ................................gGGAGTGTCCAACGCTTT  Raphanus sativus var. oleiformis
EY917792       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD976132       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD986679       --> GCTGTGCCGGCTTTTGGCCTCTCCGCCG......................  Raphanus raphanistrum subsp. landra
EX758243       --> GTTGTGCCGGCTTTTGGCCTCTCCGCCGGAGTAGGAGTGTCCAACGCTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX748154       --> GTTGTGCCGGCTTTTGGCCTCTCCACCGGAGTAGGAGTGTCCAACGCTTT  Raphanus raphanistrum subsp. maritimus
EX749748       --> GTTGTGCCGGCTTTTGGCCTCTCCACCGGAGTAGGAGTGTCCAACGCTTT  Raphanus raphanistrum subsp. maritimus
EY898138       --> GTTGTGCCGGCTTTTGGCCTCTCCACCGGAGTAGGAGTGTCCAACGCTTT  Raphanus raphanistrum subsp. maritimus
FY443085       --> GCTGTGCCGGCTTTTGGCCTCTCCGCCGGGGTAGGAGTGTCCAACGCTTT  Raphanus sativus cv GSK3-1
EV569856       --> GCTGTGCCGGCTTTTGGCCTCTCCGCCGGAGTAGGAGTGTCCAACGCTTT  Raphanus raphanistrum subsp. landra
FY447574       --> GCTGTGCCGGCTTTTGGCCTCTCCGCCGGGGTAGGAGTGTCCAACGCTTT  Raphanus sativus cv GSK3-1
EY921686       --> GCTGTGCCGGCTTTTGGCCTCTCCGCCGGAGTAGGAGTGTCCGACGCTTT  Raphanus raphanistrum subsp. landra
FD564631       --> ................................gGGAGTGTCCAACGCTTT  Raphanus sativus var. oleiformis
FD940690       --> ................................gGGAGTGTCCAACGCTTT  Raphanus sativus var. oleiformis
FY444463       --> .....................................TGTCCAACGCTTT  Raphanus sativus cv GSK3-1
FD980207       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD958233       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FY442953       --> ..................................................  Raphanus sativus cv GSK3-1
FY445484       --> ..................................................  Raphanus sativus cv GSK3-1
FD938389       --> ..................................................  Raphanus sativus var. oleiformis

               501    -    551
UN18000        --> GGTTTTCGAGATCGTGATGACCTTCGGGCTTGTTTACACAGTCTACGCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574300       <-- GGTTTTCGAGATCGTGATGACCTTCGGGCTTGTTTACACAGTCTACGCCA
FD982888       <-- GGTTTTCGAGATCGTGATGACCTTCGGGCTTGTTTACACAGTCTACGCCA
EX752178       <-- GGTTTTCGAGATCGTGATGACCTTCGGGCTTGTTTACACAGTTTACGCCA
EX753359       <-- GGTTTTCGAGATCGTGATGACCTTCGGGCTTGTTTACACAGTCTACGCCA
EY894282       <-- GGTTTTCGAGATCGTGATGACCTCCGGGCTTGTTTACACAGTCTACGCCA
FD937253       <-- GGTTTTGGAGATCGTGATGACCTTCGGGCTTGTTTACACAGTCTACGCCA
FD568070       <-- GGTTTTCGAGATCGTGATGACCTTCGGGCTTGTTTACACAGTCTGCGCCA
EY917792       <-- ...........TCGTGATGACCTTCGGGCTTGTTTACACAGTCTACGCCA
FD976132       <-- ..................................................
FD986679       --> ..................................................
EX758243       --> GGTTTTCGAGATCGTGATGACCTTCGGGCTTGTTTACACGGTCTACGCCA
EX748154       --> GGTTTTCGAGATCGTGATGACCTTCGGGCTTGTTTACACAGTCTACGCCA
EX749748       --> GGTTTTCGAGATCGTGATGACCTTCGGGCTTGTTTACACAGTCTACGCCA
EY898138       --> GGTTTTCGAGATCGTGATGACCTCCGGGCTTGTTTACACAGTCTACGCCA
FY443085       --> GGTTTTCGAGATCGTGATGACCTTCGGGCTTGTTTACACAGTCTACGCCA
EV569856       --> GGTTTTCGAGATCGTGATGACCTTCGGGCTTGTTTACACAGTCTACGCCA
FY447574       --> GGTTTTCGAGATCGTGATGACCTTCGGGCTTGTTTACACAGTCTACGCCA
EY921686       --> GGTTTTCGAGATCGTGATGACCTTCGGGCTTGTTTACACAGTCTACGCCA
FD564631       --> GGTTTTCGAGATCGTGATGACCTTCGGGCTTGTTTACACAGTCTGCGCCA
FD940690       --> GGTTTTCGAGATCGTGATGACCTTCGGGCTTGTTTACACAGTCTGCGCCA
FY444463       --> GGTTTTCGAGATCGTGATCACCTTCGGGCTTGTTTACACAGTCTACGCCA
FD980207       --> ..................................................
FD958233       --> ..................................................
FY442953       --> ..................................................
FY445484       --> ..................................................
FD938389       --> ..................................................

               551    -    601
UN18000        --> CCGCCGTCGACCCCAAGAACGGAAGTCTTGGAACCATCGCTCCCATCGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574300       <-- CCGCCGTCGACCCCAAGAACGGAAGTCTTGGAACCATCGCTCCCATCGCA  Raphanus raphanistrum subsp. landra
FD982888       <-- CCGCCGTCGACCCCAAGAACGGAAGTCTTGGAACCATCGCTCCCATCGCA  Raphanus raphanistrum subsp. landra
EX752178       <-- CCGCCATCGACCCCAAGAACGGAAGTCTTGGAACCATCGCTCCCATCGCA  Raphanus raphanistrum subsp. maritimus
EX753359       <-- CCGCCATCGACCCCAAGAACGGAAGTCTTGGAACCATCGCTCCCATCGCA  Raphanus raphanistrum subsp. maritimus
EY894282       <-- CCGCCATCGACCCCAAGAACGGAAGTCTTGGAACCATCGCTCCCATCGCA  Raphanus raphanistrum subsp. maritimus
FD937253       <-- CCGCCGTAGACCCCAAGAACGGAAGTCTTGGAACCATCGCTCCCATCGCA  Raphanus sativus var. oleiformis
FD568070       <-- CCGCCGTCGACCCCAAGAACGGAAGTCTTGGAACAATCGCTCCCATCGCA  Raphanus sativus var. oleiformis
EY917792       <-- CCGCCGTCGACCCCAAGAACGGAAGTCTTGGAACCATCGCTCCCATCGCA  Raphanus raphanistrum subsp. landra
FD976132       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD986679       --> ..................................................  Raphanus raphanistrum subsp. landra
EX758243       --> CCGCCGTCGACCCCAAGAACGGAAGTCTTGGAACCATCGCTCCCATCGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX748154       --> CCGCCATCGACCCCAAGAACGGAAGTCTTGGAACCATCGCTCCCATCGCA  Raphanus raphanistrum subsp. maritimus
EX749748       --> CCGCCATCGACCCCAAGAACGGAAGTCTTGGAACCATCGCTCCCATCGCA  Raphanus raphanistrum subsp. maritimus
EY898138       --> CCGCCATCGACCCCAAGAACGGAAGTCTTGGAACCATCGCTCCCATCGCA  Raphanus raphanistrum subsp. maritimus
FY443085       --> CCGCCGTCGACCCCAAGAACGGAAGTCTTGGAACAATCGCTCCCATCGCA  Raphanus sativus cv GSK3-1
EV569856       --> CCGCCGTCGACCCCAAGAACGGAAGTCTTGGAACCATCGCTCCCATCGCA  Raphanus raphanistrum subsp. landra
FY447574       --> CCGCCGTCGACCCCAAGAACGGAAGTCTTGGAACAATCGCTCCCATCGCA  Raphanus sativus cv GSK3-1
EY921686       --> CCGCCGTCGACCCCAAGAACGGAAGTCTTGGAACCATCGCTCCCATCGCA  Raphanus raphanistrum subsp. landra
FD564631       --> CCGCCGTCGACCCCAAGAACGGAAGTCTTGGAACAATCGCTCCCATCGCA  Raphanus sativus var. oleiformis
FD940690       --> CCGCCGTCGACCCCAAGAACGGAAGTCTTGGAACAATCGCTCCCATCGCA  Raphanus sativus var. oleiformis
FY444463       --> CCGCCGTCGACCCCAAGAACGGAAGTCTTGGAACAATCGCTCCCATCGCA  Raphanus sativus cv GSK3-1
FD980207       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD958233       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FY442953       --> ..................................................  Raphanus sativus cv GSK3-1
FY445484       --> ..................................................  Raphanus sativus cv GSK3-1
FD938389       --> ..................................................  Raphanus sativus var. oleiformis

               601    -    651
UN18000        --> ATCGGTTTCATCGTCGGTGCCAACATCTTAGCAGGAGGAGCATTCAGCGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574300       <-- ATCGGTTTCATTGTCGGTGCCAACATCTTAGCAGGAGGAGCCTTCAGCGG  Raphanus raphanistrum subsp. landra
FD982888       <-- ATCGGTTTCATTGTCGGTGCCAACATCTTAGCAGGAGGAGCCTTCAGCGG  Raphanus raphanistrum subsp. landra
EX752178       <-- ATCGGTTTCATCGTCGGTGCCAACATCTTAGCCGGAGGAGCATTCAGCGG  Raphanus raphanistrum subsp. maritimus
EX753359       <-- ATCGGTTTCATCGTCGGTGCCAACATCTTAGCCGGAGGAGCATTCAGCGG  Raphanus raphanistrum subsp. maritimus
EY894282       <-- ATCGGTTTCATCGTCGGTGCCAACATCTTAGCCGGAGGAGCATTCAGCGG  Raphanus raphanistrum subsp. maritimus
FD937253       <-- ATCGGTTTCATTGTCGGTGCCAACATCTTAGCAGGAGGAGCATTCAGCGG  Raphanus sativus var. oleiformis
FD568070       <-- ATCGGTTTCATCGTCGGTGCCAACATCTTAGCAGGAGGAGCATTCAGCGG  Raphanus sativus var. oleiformis
EY917792       <-- ATCGGTTTCATTGTCGGTGCCAACATCTTAGCAGGAGGAGCCTTCAGCGG  Raphanus raphanistrum subsp. landra
FD976132       <-- .......gCATCGTCGGTGCCAACATCTTAGCAGGAGGAGCATTCAGCGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD986679       --> ..................................................  Raphanus raphanistrum subsp. landra
EX758243       --> ATCGGTTTCATTGTCGGTGCCAACATCTTAGCCGGAGGAGCATTCAGCGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX748154       --> ATCGGTTTCATC......................................  Raphanus raphanistrum subsp. maritimus
EX749748       --> ATCGGTTTCATCGTCGGTGCCAACATCTTAGCCGGAGGAGCATTCAGCGG  Raphanus raphanistrum subsp. maritimus
EY898138       --> ATCGGTTTCATCGTCGGTGCCAACATCTTAGCCGGAGGAGCATTCAGCGG  Raphanus raphanistrum subsp. maritimus
FY443085       --> ATCGGTTTCATCGTCGGTGCCAACATCTTAGCAGGAGGAGCATTCAGCGG  Raphanus sativus cv GSK3-1
EV569856       --> ATCGGTTTCATTGTCGGTGCCAACATCTTAGCAGGAGGAGCCTTCAGCGG  Raphanus raphanistrum subsp. landra
FY447574       --> ATCGGTTTCATCGTCGGTGCCAACATCTTAGCAGGAGGAGCATTCAGCGG  Raphanus sativus cv GSK3-1
EY921686       --> ATCGGTTTCATTGTCGGTGCCAACATCTTA....................  Raphanus raphanistrum subsp. landra
FD564631       --> ATCGGTTTCATCGTCGGTGCCAACATCTTAGCAGGAGGAGCATTCAGCGG  Raphanus sativus var. oleiformis
FD940690       --> ATCGGTTTCATCGTCGGTGCCAACATCTTAGCAGGAGGAGCATTCAGCGG  Raphanus sativus var. oleiformis
FY444463       --> ATCGGTTTCATCGTCGGTGCCAACATCTTAGCAGGAGGAGCATTCAGCGG  Raphanus sativus cv GSK3-1
FD980207       --> .......gCATCGTCGGTGCCAACATCTTAGCAGGAGGAGCATTCAGCGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD958233       --> ...............................gAGGAGGAGCATTCAGCGG  Raphanus sativus cv Rat-Tail Radish #3870
FY442953       --> ..................................................  Raphanus sativus cv GSK3-1
FY445484       --> ..................................................  Raphanus sativus cv GSK3-1
FD938389       --> ..................................................  Raphanus sativus var. oleiformis

               651    -    701
UN18000        --> AGCCTCCATGAACCCCGCCGTGGCCTTCGGACCAGCTGTGGTAAGCTGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574300       <-- AGCCTCCATGAACCCTGCCGTGGCTTTCGGACCAGCTGTGGTGAGCTGGT  Raphanus raphanistrum subsp. landra
FD982888       <-- AGCCTCCATGAACCCTGCCGTGGCTTTCGGACCAGCTGTGGTGAGCTGGT  Raphanus raphanistrum subsp. landra
EX752178       <-- AGCCTCCATGAACCCCGCCGTGGCCTTCGGACCAGCTGTGGTAAGCTGGT  Raphanus raphanistrum subsp. maritimus
EX753359       <-- AGCCTCCATGAACCCCGCCGTGGCCTTCGGACCAGCTGTGGTAAGCTGGT  Raphanus raphanistrum subsp. maritimus
EY894282       <-- AGCCTCCATGAACCCCGCCGTGGCCTTCGGACCAGCTGTGGTAAGCTGGT  Raphanus raphanistrum subsp. maritimus
FD937253       <-- AGCCTCCATGAACCCCGCCGTGGCTTTCGGACCAGCTGTTGTAAGCTGGT  Raphanus sativus var. oleiformis
FD568070       <-- AGCCTCCATGAACCCCGCCGTGGCCTTCGGACCAGCTGTGGTAAGCTGGT  Raphanus sativus var. oleiformis
EY917792       <-- AGCCTCCATGAACCCTGCCGTGGCTTTCGGACCAGCTGTGGTGAGCTGGT  Raphanus raphanistrum subsp. landra
FD976132       <-- AGCCTCCATGAACCCCGCCGTGGCCTTCGGACCAGCTGTGGTAAGCTGGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD986679       --> ..................................................  Raphanus raphanistrum subsp. landra
EX758243       --> AGCCTCCATGAACCCCGCCGTGGCTTTCGGACCAGCTGTGGTAAGCTGGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX748154       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX749748       --> AGCCTCCATGAACCC-GCCGTGGCCTTCGGACCAGCTGTGGTAAGCTGGT  Raphanus raphanistrum subsp. maritimus
EY898138       --> AGCCTCCATGAACCCCGCCG..............................  Raphanus raphanistrum subsp. maritimus
FY443085       --> AGCCTCCATGAACCCCGCCGTGGCCTTCGGACCAGCTGTGGTAAGCTGGT  Raphanus sativus cv GSK3-1
EV569856       --> AGCCTCCATGAACCCTGCCGTGGCTTTCGGACCAGCTGTGGTGAGCTGGT  Raphanus raphanistrum subsp. landra
FY447574       --> AGCCTCCATGAACCCCGCCGTGGCCTTCGGACCAGCTGTGGTAAGCTGGT  Raphanus sativus cv GSK3-1
EY921686       --> ..................................................  Raphanus raphanistrum subsp. landra
FD564631       --> AGCCTCCATGAACCCCGCCGTGGCCTTCGGACCAGCTGTGGTAAGCTGGT  Raphanus sativus var. oleiformis
FD940690       --> AGCCTCCATGAACCCCGCCGTGGCCTTCGGACCAGCTGTGGTAAGCTGGT  Raphanus sativus var. oleiformis
FY444463       --> AGCCTCCATGAACCCCGCCGTGGCCTTCGGACCAGCTGTGGTAAGCTGGT  Raphanus sativus cv GSK3-1
FD980207       --> AGCCTCCATGAACCCCGCCGTGGCCTTCGGACCAGCTGTGGTAAGCTGGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD958233       --> AGCCTCCATGAACCCCGCCGTGGCCTTCGGACCAGCTGTGGTAAGCTGGT  Raphanus sativus cv Rat-Tail Radish #3870
FY442953       --> ....................................TGTGGTAAGCTGGT  Raphanus sativus cv GSK3-1
FY445484       --> ..................................................  Raphanus sativus cv GSK3-1
FD938389       --> ..................................................  Raphanus sativus var. oleiformis

               701    -    751
UN18000        --> CGTGGAACAACCACTGGGTCTACTGGGCCGGACCTCTTATTGGCGGTGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574300       <-- CGTGGAACAACCACTGGGTCTACTGGGCCGGACCTCTTATTGGCGGTGGA
FD982888       <-- CGTGGAACAACCACTGGGTCTACTGGGCCGGACCTCTTATTGGCGGTGGA
EX752178       <-- CGTGGAACAACCACTGGGTCTACTGGGCCGGACCTCTTATTGGCGGTGGA
EX753359       <-- CGTGGAACAACCACTGGGTCTACTGGGCCGGACCTCTTATTGGCGGTGGA
EY894282       <-- CGTGGAACAACCACTGGGTCTACTGGGCCGGACCTCTTATTGGCGGTGGA
FD937253       <-- CGTGGAACAACCACTGGGTCTACTGGGCCGGACCTCTTATTGGCGGTGGA
FD568070       <-- CGTGGAACAACCACTGGGTCTACTGGGCCGGACCTCTTATTGGCGGTGGA
EY917792       <-- CGTGGAACAACCACTGGGTCTACTGGGCCGGACCTCTTATTGGCGGTGGA
FD976132       <-- CGTGGAACAACCACTGGGTCTACTGGGCCGGACCTCTTATTGGCGGTGGA
FD986679       --> ..................................................
EX758243       --> CGTGGAACAACCACTGGGTCTACTGGGCCGGACCTCTTATTG........
EX748154       --> ..................................................
EX749748       --> CG................................................
EY898138       --> ..................................................
FY443085       --> CGTGGAACAACCACTGGGTCTACTGGGCCGGACCTCTTATTGGCGGTGGA
EV569856       --> CGTGGAACAACCACTGGGTCTACTGGGCCGGACCTCTTATTGGCGGTGGA
FY447574       --> CGTGGAACAACCACTGGGTCTACTGGGCCGGACCTCTTATTGGCGGTGGA
EY921686       --> ..................................................
FD564631       --> CGTGGAACAACCACTGGGTCTACTGGGCCGGACCTCTTATTGGCGGTGGA
FD940690       --> CGTGGAACAACCACTGGGTCTACTGGGCCGGACCTCTTATTGGCGGTGGA
FY444463       --> CGTGGAACAACCACTGGGTCTACTGGGCCGGACCTCTTATTGGCGGTGGA
FD980207       --> CGTGGAACAACCACTGGGTCTACTGGGCCGGACCTCTTATTGGCGGTGGA
FD958233       --> CGTGGAACAACCACTGGGTCTACTGGGCCGGACCTCTTATTGGCGGTGGA
FY442953       --> CGTGGAACA-CCACTGGGTCTACTGGGCCGGACCTCTTATTGGCGGTGGA
FY445484       --> ..........CCACTGGGTCTACTGGGCCGGACCTCTTATTGGCGGTGGA
FD938389       --> ..................................................

               751    -    801
UN18000        --> ATCGCTGGACTCATCTACGAGGTTTTCTTCATCAACACCACCCACGAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574300       <-- ATCGCTGGACTCATCTACGAGGTTTTCTTCATCAACACCACCCACGAACA
FD982888       <-- ATCGCTGGACTCATCTACGAGGTTTTCTTCATCAACACCACCCACGAACA
EX752178       <-- ATCGCTGGACTCATCTACGAGGTTTTCTTCATCAACACCACCCACGAACA
EX753359       <-- ATCGCTGGACTCATCTACGAGGTTTTCTTCATCAACACCACCCACGAACA
EY894282       <-- ATCGCCGGACTCATTTACGAGGTTTTCTTCATCAACACCACCCACGAACA
FD937253       <-- ATCGCTGGACTCATTTACGAGGTTTTCTTCATCAACACCACCCACGAACA
FD568070       <-- ATCGCTGGACTCATTTACGAGGTTTTCTTCATCAACACCACCCACGAACA
EY917792       <-- ATCGCTGGACTCATCTACGAGGTTTTCTTCATCAACACCACCCACGAACA
FD976132       <-- ATCGCTGGACTCATCTACGAGGTTTTTTTCATCAACACCACCCACGAACA
FD986679       --> ..................................................
EX758243       --> ..................................................
EX748154       --> ..................................................
EX749748       --> ..................................................
EY898138       --> ..................................................
FY443085       --> ATCGCTGGACTCATCTACGAGGTTTTCTTCATCAACACCACCCACGAACA
EV569856       --> ATCGCTGGACTCATCTACGAGGTTTTCTTCATCAACACCACCCACGAACA
FY447574       --> ATCGCTGGACTCATCTACGAGGTTTTCTTCATCAACACCACCCACGAACA
EY921686       --> ..................................................
FD564631       --> ATCGCTGGACTCATCTACGAGGTTTTCTTCATCAACACCACCCACGAACA
FD940690       --> ATCGCTGGACTCATCTACGAGGTTTTCTTCATCAACACCACCCACGAACA
FY444463       --> ATCGCTGGACTCATCTACGAGGTTTTCTTCATCAACACCACCCACGAACA
FD980207       --> ATCGCTGGACTCATCTACGAGGTTTTCTTCATCAACACCACCCACGAACA
FD958233       --> ATCGCTGGACTCATCTACGAGGTTTTCTTCATCAACACCACCCACGAACA
FY442953       --> ATCGCTGGACTCATCTACGAGGTTTTCTTCATCAACACCACCCACGAACA
FY445484       --> ATCGCTGGACTCATCTACGAGGTTTTCTTCATCAACACCACCCACGAACA
FD938389       --> ..................................................

               801    -    851
UN18000        --> GCTCCCCACCACCGACTACTGAATCAATCTCTCTGTTTCTCTCATGTGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574300       <-- GCTCCCCACCACCGACTACTGAATCAATCTCTCTGTTTCTCTCATGTGTA
FD982888       <-- GCTCCCCACCACCGACTACTGAATCAATCTCTCTGTTTCTCTCATGTGTA
EX752178       <-- GCTCCCAACCACCGACTACTGA............................
EX753359       <-- GCTCCCAACCACCGACTACTGAATCAATCTCTCTGTTTCTCTCATGTGTA
EY894282       <-- GCTCCCAACCACCGACTACTGAATCAATCTCTCTGTTTCTCTCATGGGTA
FD937253       <-- GCTCCCCACCACCGACTACTGAATCAATCTCTCTGTTTCTCTCATGTGTA
FD568070       <-- GCTCCCCACCACCGACTACTGAATCAATTTCCCTGTTTCTTTCATGTGTA
EY917792       <-- GCTCCCCACCACCGACTACTGAATCAATCTCTCTGTTTCTCTCATGTGTA
FD976132       <-- GCTCCCCACCACCGACTACTGAATCAATCTCTCTGTTTCTCTCATGTGTA
FD986679       --> ..................................................
EX758243       --> ..................................................
EX748154       --> ..................................................
EX749748       --> ..................................................
EY898138       --> ..................................................
FY443085       --> GCTCCCCACCACCGACTACTGAATCAATCTCTCTGTTTCTCTCATGTGTA
EV569856       --> GCTCCCCACCACCGACTACTGAATCAATCTCTCTGTTTCTCTCATGTGTA
FY447574       --> GCTCCCCACCACCGACTACTGAATCAATCTCTCTGTTTCTCTCATGTGTA
EY921686       --> ..................................................
FD564631       --> GCTCCCCACCACCGACTACTGAATCAATTTCCCTGTTTCTCTCATGTGTA
FD940690       --> GCTCCCCACCACCGACTACTGAATCAATTTCCCTGTTTCTCTCATGTGTA
FY444463       --> GCTCCCCACCACCGACTACTGAATCAATCTCTCTGTTTCTCTCATGTGTA
FD980207       --> GCTCCCCACCACCGACTACTGAATCAATCTCTCTGTTTCTCTCATGTGTA
FD958233       --> GCTCCCCACCACCGACTACTGAATCAATCTCTCTGTTTCTCTCATGTGTA
FY442953       --> GCTCCCCACCACCGACTACTGAATCAATCTCTCTGTTTCTCTCATGTGTA
FY445484       --> GCTCCCCACCACCGACTACTGAATCAATCTCTCTGTTTCTCTCATGTGTA
FD938389       --> .........................................gCATGTGTA

               851    -    901
UN18000        --> ATTTGATTTGTCGTCTTTGAGTTTTAATG--CTTTTTCCGTTTTGTGTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574300       <-- ATTTGATTTGTCGTCTTTGAGTTTTAATG--CTTTTTCCGTTTTGTGTAC  Raphanus raphanistrum subsp. landra
FD982888       <-- ATTTGATTTGTCGTCTTTGAGTTTTAATG--CTTTTTCCGTTTTGTGTAC  Raphanus raphanistrum subsp. landra
EX752178       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX753359       <-- ATTTGATTTGTCGTCTTTGAGTTTTAATG--CTTTTTCCGTTTTGTGTAC  Raphanus raphanistrum subsp. maritimus
EY894282       <-- ATTTGATTTGTCGTCTTTGAGTTTTAATG--CTTTTTCCGTTTTGTGTAC  Raphanus raphanistrum subsp. maritimus
FD937253       <-- ATTTGATTTGTCGTCTTTGAATTTTAATGTGTTTTTTCCGTTT-GTGTAA  Raphanus sativus var. oleiformis
FD568070       <-- ATTTGATTTGTCGTCTTTGAGTTTTAATG--CTTTTTCCGTTT-GTGTAC  Raphanus sativus var. oleiformis
EY917792       <-- ATTTGATTTGTCGTCTTTGAGTTTTAATG--CTTTTTCCGTTTTGTGTAC  Raphanus raphanistrum subsp. landra
FD976132       <-- ATTTGATTTGTCGTCTTTGAGTTTTAATG--CTTTTTCCGTTTTGTGTAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD986679       --> ..................................................  Raphanus raphanistrum subsp. landra
EX758243       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX748154       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX749748       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY898138       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FY443085       --> ATTTGATTTGTCGTCTTTGAGTTTTAATG--CTTTTT.............  Raphanus sativus cv GSK3-1
EV569856       --> ATTTGATTTGTCGTCTTTGAGTTTTAATG--CTTTTTCCGTTTTGT....  Raphanus raphanistrum subsp. landra
FY447574       --> ATTTG.............................................  Raphanus sativus cv GSK3-1
EY921686       --> ..................................................  Raphanus raphanistrum subsp. landra
FD564631       --> ATTTGATTTGTCGTCTTTGAGTTTTAATG--CTTTTTCCGTTT-GTGTAC  Raphanus sativus var. oleiformis
FD940690       --> ATTTGATTTGTCGTCTTTGAGTTTTAATG--CTTTTTCCGTTT-GTGTAC  Raphanus sativus var. oleiformis
FY444463       --> ATTTGATTTGTCGTCTTTGAGTTTTAATG--CTTTTTCCGTTTTGTGTAC  Raphanus sativus cv GSK3-1
FD980207       --> ATTTGATTTGTCGTCTTTGAGTTTTAATG--CTTTTTCCGTTTTGTGTAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD958233       --> ATTTGATTTGTCGTCTTTGAGTTTTAATG--CTTTTTCCGTTT-GTGTAC  Raphanus sativus cv Rat-Tail Radish #3870
FY442953       --> ATTTGATTTGTCGTCTTTGAGTTTTAATG--CTTTTTCCGTTTTGTGTAC  Raphanus sativus cv GSK3-1
FY445484       --> ATTTGATTTGTCGTCTTTGAGTTTTAATG--CTTTTTCCGTTTTGTGTAC  Raphanus sativus cv GSK3-1
FD938389       --> ATTTGATTTGTCGTCTTTGAGTTTTAATG--CTTTTTCCGTTT-GTGTAC  Raphanus sativus var. oleiformis

               901    -    951
UN18000        --> TTTCGCATCAGCATGGCTTTATGACCGTTGGATCTTTTCAGATTAATCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574300       <-- TTTCGCATCAGCATGGCTTTATGACCGTTGGATCTTTTCAGATTAATCAT
FD982888       <-- TTTCGCATCAGCATGGCTTTATGACCGTTGGATCTTTTCAGATTAATCAT
EX752178       <-- ..................................................
EX753359       <-- TTTCGCATCAGCATGGCTTTATGACCGTTGGATCTTTTCAGATTAATCAT
EY894282       <-- TTTCGCATCAGCATGGCTTTATGACCGTTGGATCTTTTCAGATT......
FD937253       <-- TTTCGCATCAGCATGGCTTTATGACCGTTGGATCTTTTCAGATTAATCAT
FD568070       <-- TTTCGCATCAGCATGGCTTTATGACCGTTGGATCTTTTCAGATTAATCAT
EY917792       <-- TTTCGCATCAGCATGGCTTTATGACCGTTGGATCTTTTCAGATTAATCAT
FD976132       <-- TTTCGCATCAGCATGGCTTTATGACCGTTGGATCTTTCCAGATTAATCAT
FD986679       --> ..................................................
EX758243       --> ..................................................
EX748154       --> ..................................................
EX749748       --> ..................................................
EY898138       --> ..................................................
FY443085       --> ..................................................
EV569856       --> ..................................................
FY447574       --> ..................................................
EY921686       --> ..................................................
FD564631       --> TTTCGCATCAGCATGGCTTTATGACCGTTGGATCTTTTCAGATTAATCAT
FD940690       --> TTTCGCATCAGCATGGCTTTATGACCGTTGGATCTTTTCAGATTAATCAT
FY444463       --> TTTCGCATCAGCATGGCTTTATGACCGTTGGATCTTTTCAGATTAATCAT
FD980207       --> TTTCGCATCAGCATGGCTTTATGACCGTTGGATCTTTCCAGATTAATCAT
FD958233       --> TTTCGCATCAGCATGGCTTTATGACCGTTGGATCTTTTCAGATTAATCAT
FY442953       --> TTTCGCATCAGCATGGCTTTATGACCGTTGGATCTTTTCAGATTAATCAT
FY445484       --> TTTCGCATCAGCATGGCTTTATGACCGTTGGATCTTTTCAGATTAATCAT
FD938389       --> TTTCGCATCAGCATGGCTTTATGACCGTTGGATCTTTTCAGATTAATCAT

               951    -   1001
UN18000        --> TTTTCTGTTGATTTCCAGAGTTGTAATTGCAGATATTGTGAATTATGTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574300       <-- TTTTCTGTTGATTTCCAGAGTTGTAATTGCAGATATTGTGAATTATGTAT
FD982888       <-- TTTTCTGTTGATTTCCAGAGTTGTAATTGCAGATATTGTGAATTATGTAc
EX752178       <-- ..................................................
EX753359       <-- TTTTCTGTTGATTTCCAGAGTTGTAATTGCAGATATTGTGAATTATGTAT
EY894282       <-- ..................................................
FD937253       <-- TTT-CTGTTGATTTCC..................................
FD568070       <-- TTTTCTGTTGATTTCCAGAGTTGTAATTGCAGATATTGTGAATTATGTAT
EY917792       <-- TTTTCTGTTGATTTCCAGAGTTGTAATTGCAGATATTGTGAATTATGTAT
FD976132       <-- TTTTCTGTTGATTTCCAGAGTTGTAATTGCAGATATTGTGAATTATGTAT
FD986679       --> ..................................................
EX758243       --> ..................................................
EX748154       --> ..................................................
EX749748       --> ..................................................
EY898138       --> ..................................................
FY443085       --> ..................................................
EV569856       --> ..................................................
FY447574       --> ..................................................
EY921686       --> ..................................................
FD564631       --> TTTTCTGTTGATTTCCAGAGTTGTAATTGCAGATATTGTGAATTATGTAT
FD940690       --> TTTTCTGTTGATTTCCAGAGTTGTAATTGCAGATATTGTGAATTATGTAT
FY444463       --> TTTTCTGTTGATTTCCAGAGTTGTAATTGCAGATATTGTGAATTATGTAT
FD980207       --> TTTTCTGTTGATTTCCAGAGTTGTAATTGCAGATATTGTGAATTATGTAT
FD958233       --> TTTTCTGTTGATTTCCAGAGTTGTAATTGCAGATATTGTGAATTATGT..
FY442953       --> TTTTCTGTTGATTTCCAGAGTTGTAATTGCAGATATTGTGAATTATGT..
FY445484       --> TTTTCTGTTGATTTCCAGAGTTGTAATTGCAGATATTGTGAATTATGT..
FD938389       --> TTTTCTGTTGATTTCCAGAGTTGTAATTGCAGATATTGTGAATTATGTAT

               1001   -   1051
UN18000        --> CTATCTCATCTTAAGCTTTGTGCCATTTCGTCTATTTTGAATATGTCCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574300       <-- CTATCTCATCgt......................................
FD982888       <-- c.................................................
EX752178       <-- ..................................................
EX753359       <-- CTATCTCATCTTAAGCTTTGTGCCATTTCGTCTATTTTGAATATGTCCTT
EY894282       <-- ..................................................
FD937253       <-- ..................................................
FD568070       <-- CTATCTCATCTTAAGCTTTGTGCCATTTCGTCc.................
EY917792       <-- CTATCTC...........................................
FD976132       <-- CTATCTCATCTTAAGCTTTGTGCCt.........................
FD986679       --> ..................................................
EX758243       --> ..................................................
EX748154       --> ..................................................
EX749748       --> ..................................................
EY898138       --> ..................................................
FY443085       --> ..................................................
EV569856       --> ..................................................
FY447574       --> ..................................................
EY921686       --> ..................................................
FD564631       --> CTATCTCATCTTAAGCTTTGTGCCATTTCGTCc.................
FD940690       --> CTATCTCATCTTAAGCTTTGTGCCATTTCGTCcaaaaaaa..........
FY444463       --> CTATCTC...........................................
FD980207       --> CTATCTCATCTTAAGCTTTGTGCCt.........................
FD958233       --> ..................................................
FY442953       --> ..................................................
FY445484       --> ..................................................
FD938389       --> CTATCTCATCTTAAGCTT................................

               1051   -   1101
UN18000        --> GTCACTTTATTAAGACATTAACTTAAACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574300       <-- .............................
FD982888       <-- .............................
EX752178       <-- .............................
EX753359       <-- GTCACTTTATTAAGACATTAACTTAAACC
EY894282       <-- .............................
FD937253       <-- .............................
FD568070       <-- .............................
EY917792       <-- .............................
FD976132       <-- .............................
FD986679       --> .............................
EX758243       --> .............................
EX748154       --> .............................
EX749748       --> .............................
EY898138       --> .............................
FY443085       --> .............................
EV569856       --> .............................
FY447574       --> .............................
EY921686       --> .............................
FD564631       --> .............................
FD940690       --> .............................
FY444463       --> .............................
FD980207       --> .............................
FD958233       --> .............................
FY442953       --> .............................
FY445484       --> .............................
FD938389       --> .............................