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Alignment for radish unigene UN18053

               -1     -     49
UN18053        --> ..GGGAAGACATCAGTCTATGGCCACCGATCTCTTTCCGGTTATTATAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX775541       <-- ..................................................
FD547382       <-- ..................................................
FD572695       <-- ..................................................
EX776986       <-- ..................................................
EX899003       <-- ..................................................
EW729244       <-- ..................................................
EY894000       <-- ..................................................
EX892629       <-- ..................................................
FD567375       <-- ..................................................
FD535536       --> ..GGGAAGACATCAGTCTATGGCCACCGATCTCTTTCCGGTTATTATAAC
FD568336       --> ..GGGAAGACGTCAGTCCATGGCCACCGATCTCTTTCCGGTTATTATAAC
EX773144       --> ggctGAAGACATCAGTCTATGGCCACCGATCTCTTTCCGGTTATTATAAC
EX894717       --> ......gGACATCAGTCTATGGCCACCGATCTCTTTCCGGTTATTATAAC
EY897787       --> ......gGACATCAGTCTATGGCCACCGATCTCTTTCCGGTTATTATAAC
EX888741       --> ...........ggAGTCTATGGCCACCGATCTCTTTCCGGTTATTATAAC
FD551496       --> ................ggATGGCCACCGATCTCTTTCCGGTTATTATAAC
EW726607       --> ..................................................
EX771514       --> ..................................................
EV529096       --> ..................................................

               49     -     99
UN18053        --> TTCGCCGCTTCTTCTCAGTCGCTTCTTCCGTGACGGTATCGTATCGGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX775541       <-- .............CTCAGTCGCTTCTTCCGTGACGGTATCGTATCGGAGA
FD547382       <-- .....................CTTCTTCCGTGACGGTATCGTATCGGAGA
FD572695       <-- ..........................TCCGTGACGGTATCGTATCGGAGA
EX776986       <-- ............................CGTGACGGTATCGTATCGGAGA
EX899003       <-- ...................................GTATCGTATCGGAGA
EW729244       <-- ..................................................
EY894000       <-- ..................................................
EX892629       <-- ..................................................
FD567375       <-- ..................................................
FD535536       --> TTCGCCGCTTCTTCTCAGTCGCTTCTTCCGTGACGGTATCGTATCGGAGA
FD568336       --> TTCGCCGCTTCTTCTCAGTCGCTTCTTCCGTGACGGTATCGTATCGGAGA
EX773144       --> TTCGTCGCTTCTTCTCAGTCGCTTCTTCCGTGACGGTATCGTATCGGAGA
EX894717       --> TTCGCCGCTTCTTCTCAGTCGCTTCTTCCGTGACGGTATCGTATCGGAGA
EY897787       --> TTCGCCGCTTCTTCTCAGTCGCTTCTCCCGTGACGGTATCGTATCGGAGA
EX888741       --> TTCGCCGCTTCTTCTCAGTCGCTTCTTCCGTGACGGTATCGTATCGGAGA
FD551496       --> TTCGCCGCTTCTTCTCAGTCGCTTCTTCCGTGACGGTATCGTATCGGAGA
EW726607       --> .ggGCCGCTTCTTCTCAGTCGCTTCTTCCGTGACGGTATCGTATCGGAGA
EX771514       --> ..................................................
EV529096       --> ..................................................

               99     -    149
UN18053        --> CTGTTCGTCTTTCCTTAAATCCTTAAATCAGGTTTCTTTGAAGGTATGGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX775541       <-- CTGTTCGTCTTTCCTTAAATCCTTAAATCAGGTTTCTTTGAAGGTATGGG
FD547382       <-- CTGTTCGTCTTTCCTTAAATCCTTAAATCAGGTTTCTTTGAAGGTATGGG
FD572695       <-- CTGTTCGTCTTTCCTTAAATCCTTAAATCAGGTTTCTTTGAAGGTATGGG
EX776986       <-- CTGTTCGTCTTTCCTTAAATCCTTAAATCAGGTTTCTTTGAAGGTATGGG
EX899003       <-- CTGTTCGTCTTTCCTTAAATCCTTAAATC---AGT-GGTGAA-GTATGGG
EW729244       <-- ...............................tcagtggTGAAG-TATGGG
EY894000       <-- ..................................................
EX892629       <-- ..................................................
FD567375       <-- ..................................................
FD535536       --> CTGTTCGTCTTTCCTTAAATCCTTAAATCAGGTTTCTTTGAAGGTATGGG
FD568336       --> CTGTTCGTCTTTCCTTAAATCCTTAAATCAGGTTTCTTTGAAGGTATGGG
EX773144       --> CTGTTCGTCTTTCCTTAAATCCTTAAATCAGGTTTCTTTGAAGGTATGGG
EX894717       --> CTGTTCGTCTTTCCTTAAATCCTTAAATCAG---T-GGTGAA-GTATGGG
EY897787       --> CTGTTCGTCTTTCCTTAAATCCTTAAATCAGGTTTCTTTGAAGGTATGGG
EX888741       --> CTGTTCGTCTTTCCTTAAATCCTTAAATCAG-------------TATGGG
FD551496       --> CTGTTCGTCTTTCCTTAAATCCTTAAATCAGGTTTCTTTGAAGGTATGGG
EW726607       --> CTGTTCGTCTTTCCTTAAATCCTTAAATCAG---T-GGTGAA-GTATGGG
EX771514       --> .....CGTCTTTCCTTAAATCCTTAAATCAGGTTTCTTTGAAGGTATGGG
EV529096       --> ..................................................

               149    -    199
UN18053        --> GGATGAGATTGATTTGAGTGGAGATGGAGGCGTCTTGAAACAGATTGTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX775541       <-- GGATGAGATTGATTTGAGTGGAGATGGAGGCGTCTTGAAACAGATTGTAA
FD547382       <-- GGATGAGATTGATTTGAGTGGAGATGGAGGCGTCTTGAAACAGATTGTAA
FD572695       <-- GGATGAGATTGATTTGAGTGGAGATGGAGGCGTCTTGAAACAGATTGTAA
EX776986       <-- GGATGAGATTGATTTGAGTGGAGATGGAGGCGTCTTGAAACAGATTGTAA
EX899003       <-- GGATGAGATTGATTTGAGTGGAGATGGAGGCGTCTTGAAACAGATTGTAA
EW729244       <-- GGATGAGATTGATTTGAGTGGAGATGGAGGCGTCTTGAAACAGATTGTAA
EY894000       <-- ..................................................
EX892629       <-- ..................................................
FD567375       <-- ..................................................
FD535536       --> GGATGAGATTGATTTGAGTGGAGATGGAGGCGTCTTGAAACAGATTGTAA
FD568336       --> GGATGAGATTGATTTGAGTGGAGATGGAGGCGTCTTGAAACAGATTGTAA
EX773144       --> GGATGAGATTGATTTGAGTGGAGATGGAGGCGTCTTGAAACAGATTGTAA
EX894717       --> GGATGAGATTGATTTGAGTGGAGATGGAGGCGTCTTGAAACAGATTGTAA
EY897787       --> GGATGAGATTGATTTGAGTGGAGATGGAGGCGTCTTGAAACAGATTGTAA
EX888741       --> GGATGAGATTGATTTGAGTGGAGATGGAGGCGTCTTGAAACAGATTGTAA
FD551496       --> GGATGAGATTGATTTGAGTGGAGATGGAGGCGTCTTGAAACAGATTGTAA
EW726607       --> GGATGAGATTGATTTGAGTGGAGATGGAGGCGTCTTGAAACAGATTGTAA
EX771514       --> GGATGAGATTGATTTGAGTGGAGATGGAGGCGTCTTGAAACAGATTGTAA
EV529096       --> ................gGTGGAGATGGAGGCGTCTTGAAACAGATTGTAA

               199    -    249
UN18053        --> GGAGAGCTAAACCTGATGCTATTGCACCTTCTGATGATTTTCCTGTCGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX775541       <-- GGAGAGCTAAACCTGATGCTATTGCACCTTCTGATGATTTTCCTGTCGTC
FD547382       <-- GGAGAGCTAAACCTGATGCTATTGCACCTTCTGATGATTTTCCTGTCGTC
FD572695       <-- GGAGAGCTAAACCTGATGCTATTGCACCTTCTGATGATTTTCCTGTCGTC
EX776986       <-- GGAGAGCTAAACCTGATGCTATTGCACCTTCTGATGATTTTCCTGTCGTC
EX899003       <-- GGAGAGCTAAACCTGATGCTATTGCACCTTCTGATGATTTTCCTGTCGTC
EW729244       <-- GGAGAGCTAAACCTGATGCTATTGCACCTTCTGATGATTTTCCTGTCGTC
EY894000       <-- ................TGCTATTGCACCTTCTGATGATTTTCCTGTCGTC
EX892629       <-- ..................................................
FD567375       <-- ..................................................
FD535536       --> GGAGAGCTAAACCTGATGCTATTGCACCTTCTGATGATTTTCCTGTCGTC
FD568336       --> GGAGAGCTAAACCTGATGCTATTGCACCTTCTGATGATTTTCCTGTCGTC
EX773144       --> GGAGAGCTAAACCTGATGCTATTGCACCTTCTGATGATTTTCCTGTCGTC
EX894717       --> GGAGAGCTAAACCTGATGCTATTGCACCTTCTGATGATTTTCCTGTCGTC
EY897787       --> GGAGAGCTAAACCTGATGCTATTGCACCTTCTGATGATTTTCCTGTCGTC
EX888741       --> GGAGAGCTAAACCTGATGCTATTGCACCTTCTGATGATTTTCCTGTCGTC
FD551496       --> GGAGAGCTAAACCTGATGCTATTGCACCTTCTGATGATTTTCCTGTCGTC
EW726607       --> GGAGAGCTAAACCTGATGCTATTGCACCTTCTGATGATTTTCCTGTCGTC
EX771514       --> GGAGAGCTAAACCTGATGCTATTGCACCTTCTGATGATTTTCCTGTCGTC
EV529096       --> GGAGAGCTAAACCTGATGCTATTGCACCTTCTGATGATTTTCCTGTCGTC

               249    -    299
UN18053        --> GATGTTCACTATGAGGGTATATTGGCTGAAGATGGGAAGGTTTTTGACAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX775541       <-- GATGTTCACTATGAGGGTATATTGGCTGAAGATGGAAAGGTCTTTGACAC  Raphanus raphanistrum subsp. landra
FD547382       <-- GATGTTCACTATGAGGGTATATTGGCTGAAGATGGGAAGGTTTTTGACAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD572695       <-- GATGTTCACTATGAGGGTATATTGGCTGAAGATGGGAAGGTTTTTGACAC  Raphanus sativus cv Early Scarlet Globe
EX776986       <-- GATGTTCACTATGAGGGTATATTGGCTGAAGATGGAAAGGTCTTTGACAC  Raphanus raphanistrum subsp. landra
EX899003       <-- GATGTTCACTATGAGGGTATATTGGCTGAAGATGGGAAGGTTTTTGACAC  Raphanus sativus cv Early Scarlet Globe
EW729244       <-- GATGTTCACTATGAGGGTATATTGGCTGAAGATGGGAAGGTTTTTGACAC  Raphanus sativus cv Early Scarlet Globe
EY894000       <-- GATGTTCACTATGAGGGTATATTGGCTGAAGATGGGAAGGTTTTTGACAC  Raphanus raphanistrum subsp. maritimus
EX892629       <-- ........................................TTTTTGACAC  Raphanus sativus var. oleiformis
FD567375       <-- ..................................................  Raphanus sativus var. oleiformis
FD535536       --> GATGTTCACTATGAGGGTATATTGGCTGAAGATGGGAAGGTTTTTGACAC  Raphanus raphanistrum subsp. maritimus
FD568336       --> GATGTTCACTATGAGGGTATATTGGCTGAAGATGGGAAGGTTTTTGACAC  Raphanus sativus cv Early Scarlet Globe
EX773144       --> GATGTTCACTATGAGGGTATATTGGCTGAAGATGGAAAGGTCTTTGACAC  Raphanus raphanistrum subsp. landra
EX894717       --> GATGTTCACTATGAGGGTATATTGGCTGAAGATGGGAAGGTTTTTGACAC  Raphanus sativus cv Early Scarlet Globe
EY897787       --> GATGTTCACTATGAGGGTATATTGGCTGAAGATGGGAAGGTTTTTGACAC  Raphanus raphanistrum subsp. maritimus
EX888741       --> GATGTTCACTATGAGGGTATATTGGCTGAAGATGGGAAGGTTTTTGACAC  Raphanus sativus var. oleiformis
FD551496       --> GATGTTCACTATGAGGGTATATTGGCTGAAGATGGGAAGGTTTTTGACAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW726607       --> GATGTTCACTATGAGGGTATATTGGCTGAAGATGGGAAGGTTTTTGACAC  Raphanus sativus cv Early Scarlet Globe
EX771514       --> GATGTTCACTATGAGGGTATATTGGCTGAAGATGGAAAGGTCTTTGACAC  Raphanus raphanistrum subsp. landra
EV529096       --> GATGTTCACTATGAGGGTATATTGGCTGAAGATGGGAAGGTTTTTGACAC  Raphanus raphanistrum subsp. maritimus

               299    -    349
UN18053        --> TACACGCGAAGACAATCTGGTTTTCTCCTTTGAGTTGGGTTCAGGCAGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX775541       <-- TACACGCGAAGACAATCTGGTTTTCTCCTTCGAGTTGGGTTCAGGAAGTG  Raphanus raphanistrum subsp. landra
FD547382       <-- TACACGCGAAGACAATCTGGTTTTCTCCTTTGAGTTGGGTTCAGGCAGTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD572695       <-- TACACGCGAAGACAATCTGGTTTTCTCCTTCGAGTTGGGTTCAGGAAGTG  Raphanus sativus cv Early Scarlet Globe
EX776986       <-- TACACGCGAAGACAATCTGGTTTTCTCCTTCGAGTTGGGTTCAGGAAGTG  Raphanus raphanistrum subsp. landra
EX899003       <-- TACACGCGAAGACAATCTGGTTTTCTCCTTTGAATTGGGTTCAGGCAGTG  Raphanus sativus cv Early Scarlet Globe
EW729244       <-- TACACGCGAAGACAATCTGGTTTTCTCCTTTGAATTGGGTTCAGGCAGTG  Raphanus sativus cv Early Scarlet Globe
EY894000       <-- TACACGCGAAGACAATCTGGTTTTCTCCTTCGAGTTGGGTTCAGGAAGTG  Raphanus raphanistrum subsp. maritimus
EX892629       <-- TACACGCGAAGACAATCTGGTTTTCTCCTTTGAATTGGGTTCAGGCAGTG  Raphanus sativus var. oleiformis
FD567375       <-- ..................................................  Raphanus sativus var. oleiformis
FD535536       --> TACACGCGAAGACAATCTGGTTTTCTCCTTTGAGTTGGGTTCAGGCAGTG  Raphanus raphanistrum subsp. maritimus
FD568336       --> TACACGCGAAGACAATCTGGTTTTCTCCTTCGAGTTGGGTTCAGGAAGTG  Raphanus sativus cv Early Scarlet Globe
EX773144       --> TACACGCGAAGACAATCTGGTTTTCTCCTTCGAGTTGGGTTCAGGAAGTG  Raphanus raphanistrum subsp. landra
EX894717       --> TACACGCGAAGACAATCTGGTTTTCTCCTTTGAATTGGGTTCAGGCAGTG  Raphanus sativus cv Early Scarlet Globe
EY897787       --> TACACGCGAAGACAATCTGGTTTTCTCCTTCGAGTTGGGTTCAGGAAGTG  Raphanus raphanistrum subsp. maritimus
EX888741       --> TACACGCGAAGACAATCTGGTTTTCTCCTTTGAATTGGGTTCAGGCAGTG  Raphanus sativus var. oleiformis
FD551496       --> TACACGCGAAGACAATCTGGTTTTCTCCTTTGAGTTGGGTTCAGGCAGTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW726607       --> TACACGCGAAGACAATCTGGTTTTCTCCTTTGAATTGGGTTCAGGCAGTG  Raphanus sativus cv Early Scarlet Globe
EX771514       --> TACACGCGAAGACAATCTGGTTTTCTCCTTCGAGTTGGGTTCAGGAAGTG  Raphanus raphanistrum subsp. landra
EV529096       --> TACACGCGAAGACAATCTGGTTTTCTCCTTCGAGTTGGGTTCAGGAAGTG  Raphanus raphanistrum subsp. maritimus

               349    -    399
UN18053        --> TTATCCGGTCATGGGATATTGCGCTTAAGACCATGAAGGTTGGGGAAGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX775541       <-- TTATCCGGTCATGGGACATTGCGCTTAAGACCATGAAGGTTGGGGAAGTT  Raphanus raphanistrum subsp. landra
FD547382       <-- TTATCCGGTCATGGGATATTGCGCTTAAGACCATGAAGGTTGGGGAAGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD572695       <-- TTATACGGTCATGGGATATTGCGCTTAAGACCATGAAGGTTGGGGAAGTT  Raphanus sativus cv Early Scarlet Globe
EX776986       <-- TTATCCGGTCATGGGACATTGCGCTTAAGACCATGAAGGTTGGGGAAGTT  Raphanus raphanistrum subsp. landra
EX899003       <-- TTATCCGGTCATGGGATATTGCGCTTAAGACCATGAAGGTTGGGGAAGTT  Raphanus sativus cv Early Scarlet Globe
EW729244       <-- TTATCCGGTCATGGGATATTGCGCTTAAGACCATGAAGGTTGGGGAAGTT  Raphanus sativus cv Early Scarlet Globe
EY894000       <-- TTATACGGTCATGGGATATTGCGCTTAAGACCATGAAGGTTGGGGAAGTT  Raphanus raphanistrum subsp. maritimus
EX892629       <-- TTATCCGGTCATGGGATATTGCGCTTAAGACCATGAAGGTTGGGGAAGTT  Raphanus sativus var. oleiformis
FD567375       <-- ..................................................  Raphanus sativus var. oleiformis
FD535536       --> TTATCCGGTCATGGGATATTGCGCTTAAGACCATGAAGGTTGGGGAAGTT  Raphanus raphanistrum subsp. maritimus
FD568336       --> TTATACGGTCATGGGATATTGCGCTTAAGACCATGAAGGTTGGGGAAGTT  Raphanus sativus cv Early Scarlet Globe
EX773144       --> TTATCCGGTCATGGGACATTGCGCTTAAGACCATGAAGGTTGGGGAAGTT  Raphanus raphanistrum subsp. landra
EX894717       --> TTATCCGGTCATGGGATATTGCGCTTAAGACCATGAAGGTTGGGGAAGTT  Raphanus sativus cv Early Scarlet Globe
EY897787       --> TTATACGGTCATGGGATATTGCGCTTAAGACCATGAAGGTTGGGGAAGTT  Raphanus raphanistrum subsp. maritimus
EX888741       --> TTATCCGGTCATGGGATATTGCGCTTAAGACCATGAAGGTTGGGGAAGTT  Raphanus sativus var. oleiformis
FD551496       --> TTATCCGGTCATGGGATATTGCGCTTAAGACCATGAAGGTTGGGGAAGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW726607       --> TTATCCGGTCATGGGATATTGCGCTTAAGACCATGAAGGTTGGGGAAGTT  Raphanus sativus cv Early Scarlet Globe
EX771514       --> TTATCCGGTCATGGGACATTGCGCTTAAGACCATGAAGGTTGGGGAAGTT  Raphanus raphanistrum subsp. landra
EV529096       --> TTATACGGTCACGGGATATTGCGCTTAAGACCATGAAGGTTGGGGAAGTT  Raphanus raphanistrum subsp. maritimus

               399    -    449
UN18053        --> GCGAAAATCACATGTAAGCCAGAGTATGCTTACGGAAGTGGTGGATCTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX775541       <-- GCGAAAATCACATGTAAGCCAGAGTATGCTTACGGAAGTGTAGGATCTCC  Raphanus raphanistrum subsp. landra
FD547382       <-- GCGAAAATCACATGTAAGCCAGATTATGCTTACGGAAGTGGAGGATCTCC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD572695       <-- GCGAAACTCACATGTAAGCCAGAGTATGCTTACGGAAGTGGTGGATCTCC  Raphanus sativus cv Early Scarlet Globe
EX776986       <-- GCGAAAATCACATGTAAGCCAGAGTATGCTTACTGAAGTGGAGGATCTCC  Raphanus raphanistrum subsp. landra
EX899003       <-- GCGAAAATCACATGTAAGCCAGAGTATGCTTACGGAAGTGGTGGATCTCC  Raphanus sativus cv Early Scarlet Globe
EW729244       <-- GCGAAAATCACATGTAGGCCAGAGTATGCTTACGGAAGTGGTGGATCTCC  Raphanus sativus cv Early Scarlet Globe
EY894000       <-- GCGAAACTCACATGTAAGCCAGAGTATGCTTACGGAAGTGGTGGATCTCC  Raphanus raphanistrum subsp. maritimus
EX892629       <-- GCGAAAATCACATGTAAGCCAGAGTATGCTTACGGAAGTGGTGGATCTCC  Raphanus sativus var. oleiformis
FD567375       <-- ..................................................  Raphanus sativus var. oleiformis
FD535536       --> GCGAAAATCACATGTAAGCCAGATTATGCTTACGGAAGTGGAGGATCTCC  Raphanus raphanistrum subsp. maritimus
FD568336       --> GCGAAACTCACATGTAAGCCAGAGTATGCTTACGGAAGTGGTGGATCTCC  Raphanus sativus cv Early Scarlet Globe
EX773144       --> GCGAAAATCACATGTAAGCCAGAGTATGCTTACTGAAGTGGAGGATCTCC  Raphanus raphanistrum subsp. landra
EX894717       --> GCGAAAATCACATGTAAGCCAGAGTATGCTTACGGAAGTGGTGGATCTCC  Raphanus sativus cv Early Scarlet Globe
EY897787       --> GCGAAACTCACATGTAAGCCAGAGTATGCTTACGGAAGTGGTGGATCTCC  Raphanus raphanistrum subsp. maritimus
EX888741       --> GCGAAAATCACATGTAAGCCAGAGTATGCTTACGGAAGTGGTGGATCTCC  Raphanus sativus var. oleiformis
FD551496       --> GCGAAAATCACATGTAAGCCAGATTATGCTTACGGAAGTGGAGGATCTCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW726607       --> GCGAAAATCACATGTAGGCCAGAGTATGCTTACGGAAGTGGTGGATCTCC  Raphanus sativus cv Early Scarlet Globe
EX771514       --> GCGAAAATCACATGTAAGCCAGAGTATGCTTACGGAAGTGTAGGATCTCC  Raphanus raphanistrum subsp. landra
EV529096       --> GCGAAACTCACATGTAAGCCAGAGTATGCTTACGGAAGTGGTGGATCTCC  Raphanus raphanistrum subsp. maritimus

               449    -    499
UN18053        --> TCCTGACATCCCACCTGATGCAACTTTGATATTTGAAGTGGAATTGGTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX775541       <-- TCCTGACATCCCACCTGATGCAACTTTGATATTTGAAGTGGAATTGGTTG
FD547382       <-- TCCTGACATCCCACCTGATGCAACTTTGATATTTGAAGTGGAATTGGTTG
FD572695       <-- TCCTGACATCCCACCTGATGCAACTTTGATATTTGAAGTGGAATTGGTTG
EX776986       <-- TCCTGACATCCCACCTGATGCAACTTTGATATTTGAAGTGGAATTGGTTG
EX899003       <-- TCCTGACATCCCACCTGATGCAACTTTGATATTTGAAGTGGAATTGGTTG
EW729244       <-- TCCTGACATCCCACCTGATGCAACTTTGATATTTGAAGTGGAATTGGTTG
EY894000       <-- TCCTGACATCCCACCTGATGCAACTTTGATATTTGAAGTGGAATTGGTTG
EX892629       <-- TCCTGACATCCCACCTGATGCAACTTTGATATTTGAAGTGGAATTGGTTG
FD567375       <-- ...TGACATCCCACCTGATGCAACTTTGATATTTGAAGTGGAATTGGTTG
FD535536       --> TCCTGACATCCCACCTGATGCAACTTTGATATTTGAAGTGGAATTGGTTG
FD568336       --> TCCTGACATCCCACCTGATGCAACTTTGATATTTGAAGTGGAATTGGTTG
EX773144       --> TCCTGACATCCCACCTGATGCAACTTTGATATTTGAAGTGGAATTGGTTG
EX894717       --> TCCTGACATCCCACCTGATGCAACTTTGATATTTGAAGTGGAATTGGTTG
EY897787       --> TCCTGACATCCCACCTGATGCAACTTTGATATTTGAAGTGGAATTGGTTG
EX888741       --> TCCTGACATCCCACCTGATGCAACTTTGATATTTGAAGTGGAATTGGTTG
FD551496       --> TCCTGACATCCCACCTGATGCAACTTTGATATTTGAAGTGGAATTGGTTG
EW726607       --> TCCTGACATCCCACCTGATGCAACTTTGATATTTGAAGTGGAATTGGTTG
EX771514       --> TCCTGACATCCCACCTGATGCAACTTTGATATTTGAAGTGGAATTGGTTG
EV529096       --> TCCTGACATCCCACCTGATGCAACTTTGATATTTGAGGTGGAATTGGTTG

               499    -    549
UN18053        --> CTTGTAGACCGAGGAAAGGTGCTAGTGTTGGAAGTGTTTCTGAGGATAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX775541       <-- CTTGTAGACCGAGGAAAGGTGCTAGTGTTGGAAGTGTTTCTGAGGATAGA
FD547382       <-- CTTGTAGACCGAGGAAAGGTGCTAGTGTTGGAAGTGTTTCTGAGGATAGA
FD572695       <-- CTTGTAGACCGAGGAAAGGTGCTAGTGTTGGAAGTGTTTCTGAGGATAGA
EX776986       <-- CTTGTAGACCGAGGAAAGGTGCTAGTGTTGGAAGTGTTTCTGAGGATAGA
EX899003       <-- CTTGTAGACCGAGGAAAGGTGCTAGTGTTGGAAGTGTTTCTGAGGATAGA
EW729244       <-- CTTGTAGACCGAGGAAAGGTGCTAGTGTTGGAAGTGTTTCTGAGGATAGA
EY894000       <-- CTTGTAGACCGAGGAAAGGTGCTAGTGTTGGAAGTGTTTCTGAGGATAGA
EX892629       <-- CTTGTAGACCGAGGAAAGGTGCTAGTGTTGGAAGTGTTTCTGAGGATAGA
FD567375       <-- CTTGTAGACCGAGGAAAGGTGCTAGTGTTGGAAGTGTTTCTGAGGATAGA
FD535536       --> CTTGTAGACCGAGGAAAGGTGCTAGTGTTGGAAGTGTTTCTGGGGATAGA
FD568336       --> CTTGTAGACCGAGGAAAGGTGCTAGTGTTGGAAGTGTTTCTGAG-ATAGA
EX773144       --> CTTGTAGACCGAGGAAAGGTGCTAGTGTTGGAAGTGTTTCTGAGGATAGA
EX894717       --> CTTGTAGACCGAGGAAAGGTGCTAGTGTTGGAAGTGTTTCTGAGGATAGA
EY897787       --> CTTGTAGACCGAGGAAAGGTGCTAGTGTTGGAAGTGTTTCTGAGGATAGA
EX888741       --> CTTGTAGACCGAGGAAAGGTGCTAGTGTTGGAAGTGTTTCTGAGGATAGA
FD551496       --> CTTGTAGACCGAGGAAAGGTGCTAGTGTTGGAAGTGTTTCTGAGGATAGA
EW726607       --> CTTGTAGACCGAGGAAAGGTGCTAGTGTTGGAAGTGTTTCTGAGGATAGA
EX771514       --> CTTGTAGACCGAGGAAAGGTGCTAGTGTTGGAAGTGTTTCTGAGGATAGA
EV529096       --> CTTGTAGACCGAGGAAAGGTGCTAGTGTTGGAAGTGTTTCTGAGGATAGA

               549    -    599
UN18053        --> GCTAGGCTAGAAGATCTGAAGAAGCAGAGAGAGATTGCTGCAGCTGCTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX775541       <-- GCTAGGCTAGAAGATCTGAAGAAGCAGAGAGAGATTGCTGCAGCTGCTAA
FD547382       <-- GCTAGGCTAGAAGATCTGAAGAAGCAGAGAGAGATTGCTGCAGTTGCTAA
FD572695       <-- GCTAGGCTAGAAGATCTGAAGAAGCAGAGAGAGATTGCTGCAGCTGCTAA
EX776986       <-- GCTAGGCTAGAAGATCTGAAGAAGCAGAGAGAGATTGCTGCAGCTGCTAA
EX899003       <-- GCTAGGCTAGAAGATCTGAAGAAGCAGAGAGAGATTGCTGCAGCTGCTAA
EW729244       <-- GCTAGGCTAGAAGATCTGAAGAAGCAGAGAGAGATTGCTGCAGCTGCTAA
EY894000       <-- GCTAGGCTAGAAGATCTGAAGAAGCAGAGAGAGATTGCTGCAGCTGCTAA
EX892629       <-- GCTAGGCTAGAAGATCTGAAGAAGCAGAGAGAGATTGCTGCAGCTGCTAA
FD567375       <-- GCTAGGCTAGAAGATCTGAAGAAGCAGATAGAGATTGCTGCAGCTGCTAA
FD535536       --> GCTAGGCTAGAAGATCTGAAGAAGCAGAGAGAGATTGCTGCAGCTGCTAA
FD568336       --> G.................................................
EX773144       --> GCTAGGCTAGAAGATCTGAAGAAGCAGAGAGAGATTGCTGCAGCTGCTAA
EX894717       --> GCTAGGCTAGAAGATCTGAAGAAGCAGAGAGAGATTGCTGCAGCTGCTAA
EY897787       --> GCTAGGCTAGAAGATCTGAAGAAGCAGAGAGAGATTGCTGCAGCTGCTAA
EX888741       --> GCTAGGCTAGAAGATCTGAAGAAGCAGAGAGAGATTGCTGCAGCTGCTAA
FD551496       --> GCTAGGCTAGAAGATCTGAAGAAGCAGAGAGAGATTGCTGCAGTTGCTAA
EW726607       --> GCTAGGCTAGAAGATCTGAAGAAGCAGAGAGAGATTGCTGCAGCTGCTAA
EX771514       --> GCTAGGCTAGAAGATCTGAAGAAGCAGAGAGAGATTGCTGCAGCTGCTAA
EV529096       --> GCTAGGCTAGGAGATCTGAAGAAGCAGAGAGAGATTGCTGCAGCTGCTAA

               599    -    649
UN18053        --> AGAGGATGATAAGAAAAAGAGAGAAGAAGCAAAAGCAGCTGCAGCTGCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX775541       <-- AGAGGATGATAAGAAAAAGAGAGAAGAAGCAAAAGCAGCTGCAGCTGCTA  Raphanus raphanistrum subsp. landra
FD547382       <-- AGAGGATGATAAGAAAAAGAGAGAAGAAGCAAAAGCAGCTGCAGCTGCTA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD572695       <-- AGAGGATGATAAGAAAAAGAGAGAAGAAGCAAAAGCTGCTGCAGCTGCTA  Raphanus sativus cv Early Scarlet Globe
EX776986       <-- AGAGGATGATAAGAAAAAGAGAGAAGAAGCAAAAGCAGCTGCAGCTGCTA  Raphanus raphanistrum subsp. landra
EX899003       <-- AGAGGATGATAAGAAAAAGAGAGAAGAAGCAAAAGCTGCTGCAGCTGCTA  Raphanus sativus cv Early Scarlet Globe
EW729244       <-- AGAGGATGATAAGAAAAAGAGAGAAGAAGCAAAAGCTGCTGCAGCTGCTA  Raphanus sativus cv Early Scarlet Globe
EY894000       <-- AGAGGATGATAAGAAAAAGAGAGAAGAAGCAAAAGCAGCTGCAGCTGCTA  Raphanus raphanistrum subsp. maritimus
EX892629       <-- AGAGGATGATAAGAAAAAGAGAGAAGAAGCAAAAGCTGCTGCAGCTGCTA  Raphanus sativus var. oleiformis
FD567375       <-- AGAGGATGATAAGAAAAAGAGAGAAGAAGCAAAAGCTGCTGCAGCTGCTA  Raphanus sativus var. oleiformis
FD535536       --> AGAGGATGATAAGAAAAAGAGAGAAGAAGCAAAAGCAGCTGCAGCTGCTA  Raphanus raphanistrum subsp. maritimus
FD568336       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX773144       --> AGAGGATGATAAGAAAAAGAGAGAAGAAGCAAAAGCAGCTGCAGCTGCTA  Raphanus raphanistrum subsp. landra
EX894717       --> AGAGGATGATAAGAAAAAGAGAGAAGAAGCAAAAGCTGCTGCAGCTGCTA  Raphanus sativus cv Early Scarlet Globe
EY897787       --> AGAGGATGATAAGAAAAAGAGAGAAGAAGCAAAAGCAGCTGCAGCTGCTA  Raphanus raphanistrum subsp. maritimus
EX888741       --> AGAGGATGATAAGAAAAAGAGAGAAGAAGCAAAAGCTGCTGCAGCTGCTA  Raphanus sativus var. oleiformis
FD551496       --> AGAGGATGATAAGAAAAAGAGAGAAGAAGCAAAAGCAGCTGCAGCTGCTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW726607       --> AGAGGATGATAAGAAAAAGAGAGAAGAAGCAAAAGCTGCTGCAGCTGCTA  Raphanus sativus cv Early Scarlet Globe
EX771514       --> AGAGGATGATAAGAAAAAGAGAGAAGAAGCAAAAGCAGCTGCAGCTGCTA  Raphanus raphanistrum subsp. landra
EV529096       --> AGAGGATGATAAGAAAAAGAGAGAAGAAGCAAAAGCAGCTGCAGCTGCTA  Raphanus raphanistrum subsp. maritimus

               649    -    699
UN18053        --> GGATTCAAGCTAAGCTAGACGCTAAGAAGGGTCAAGGCAAGGGAAAAGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX775541       <-- GGATTCAAGCTAAGCTAGACGCTAAGAAGGGTCAAGGCAAGGGAAAAGGC
FD547382       <-- GGATTCAAGCTAAGCTAGACGCTAAGAAGGGTCCAGGCAAGGGAAAAGGC
FD572695       <-- GGATTCAAGCTAAGCTAGACGCTAAGAAGGGTCAAGGCAAGGGAAAAGGC
EX776986       <-- GGATTCAAGCTAAGCTAGACGCTAAGAAGGGTCAAGGCAAGGGAAAAGGC
EX899003       <-- GGATTCAAGCTAAGCTAGACGCTAAGAAGGGTCAAGGCAAGGGAAAAGGC
EW729244       <-- GGATTCAAGCTAAGCTAGACGCTAAGAAGGGTCAAGGCAAGGGAAAAGGC
EY894000       <-- GGATTCAAGCTAAGCTAGACGCTAAGAAGGGTCAAGGCAAGGGAAAAGGC
EX892629       <-- GGATTCAAGCTAAGCTAGACGCTAAGAAGGGTCAAGGCAAGGGAAAAGGC
FD567375       <-- GGATTTAAGCTAAGCTAGACGCTAAGAAGGGTCAAGGCAAGGGAAAAGGC
FD535536       --> G-ATTCAAGCTAAGCTAGACGCTAAG........................
FD568336       --> ..................................................
EX773144       --> G-ATTCAAGCTAAGCTAGACGCTAAGAA......................
EX894717       --> GGATTCAAGCTAAGCTAGACGCTAAG........................
EY897787       --> GGATTCAAGCTAAGCTAGACGCTAA.........................
EX888741       --> GGATTCAAGCTAAGCTAGACGCTAAGAAGGGTCAAGGCAAGGGAAAAG-C
FD551496       --> GGATTCAAGCTAAGCTAGACGCTAAGAAGGtcca................
EW726607       --> GGATTCAAGCTAAGCTAGACGCTAAGAAGG-TCAAGG.............
EX771514       --> G-ATTCAAGCTAAGCTAGACGCTAAGAAGG-TCAAGG.............
EV529096       --> GGATTCAAGCTAAGCTAGACGCTAAGAAGGGTCAAGGCAAGGGAAAAGGC

               699    -    749
UN18053        --> AAAGGCAAATCTAAATAAGTGACAAAAAAGCATGAGTCCAACGTTGTTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX775541       <-- AAAGGCAAATCTAAATAAGTGAC---AAGGCATGAGTCCAACGTTGTTGT
FD547382       <-- AAAGGCAAATCTAAATAAGGGACA---AAGCATGAGTCCAACGTTGTTGT
FD572695       <-- AAAGGCAAATCTAAATAAGTGACAAAAAAGCATGAGTCCAACGTTGTTGT
EX776986       <-- AAAGGCAAATCTAAATAAGTGAC---AAGGCATGAGTCCAACGTTGTTGT
EX899003       <-- AAAGGCAAATCTAAATAAGTGACAAAAAAGCATGAGTCCAACGTTGTTGT
EW729244       <-- AAAGGCAAATCTAAATAAGTGACAAAAAAGCATGAGTCCAACGTTGTTGT
EY894000       <-- AAAGGCAAATCTAAATAAGTGACAAAAAAGCATG-GTCCAACGTTGTTGT
EX892629       <-- AAAGGCAAATCTAAATAAGTGACAAAAAAGCATGAGTCCAACGTTGTTGT
FD567375       <-- AAAGGCAAATCTAAATAAGTGACAAAAAAGCATGAGTCCAACGTTGTTGT
FD535536       --> ..................................................
FD568336       --> ..................................................
EX773144       --> ..................................................
EX894717       --> ..................................................
EY897787       --> ..................................................
EX888741       --> AAAGGCAAATCTAAATAAGTGACAAAAA-GCATGAGTCCAACGTTGTTGT
FD551496       --> ..................................................
EW726607       --> ..................................................
EX771514       --> ..................................................
EV529096       --> AAAGGCAAATCTAAATAAGTGACAAAAAAGCATGAGTCCAACGTTGTTGT

               749    -    799
UN18053        --> AAGCTCCTAAAGATTATATAAGTTCATGATTTTAAAGCTTGTTGTTAAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX775541       <-- AAACTCCTAA-GATTATATAAGTTCATGATTTTAAAGCTTGTTGTCAAGT
FD547382       <-- AAACTCCTAAAGATTATATAAGTTCATGATTTTAAAGCTTGTTGTTAAGT
FD572695       <-- AAGCTCCTAAAGATTATATAAGTTCATGATTTTAAAGCTTGTTGTTAAGT
EX776986       <-- AAACTCCTAA-GATTATATAAGTTCATGATTTTAAAGCTTGTTGTCAAGT
EX899003       <-- AAGCTCCTAAAGATTATATAAGTTCATGATTTTAAAGCTTGTTGTTAAGT
EW729244       <-- AAGCTCCTAAAGATTATATAAGTTCATGATTTTAAAGCTTGTTGTTAAGT
EY894000       <-- AAGCTCCTAAAGATTATATAAGTTCATGATTTTAAAGCTTGTTGTTAAGT
EX892629       <-- AAGCTCCTAAAGATTATATAAGTTCATGATTTTAAAGCTTGTTGCTAAGT
FD567375       <-- AAGCTCCTAAAGATTATATAAGTTCATGATTTTAAAGCTTGTTGTTAAGT
FD535536       --> ..................................................
FD568336       --> ..................................................
EX773144       --> ..................................................
EX894717       --> ..................................................
EY897787       --> ..................................................
EX888741       --> AAGCTCCTAAAGAT-ATATAAGTTCATGAT....................
FD551496       --> ..................................................
EW726607       --> ..................................................
EX771514       --> ..................................................
EV529096       --> AAGCTCCTAAAGATTATATAAGTTCATGATTTTAAAGCTTGTTGTTAAGT

               799    -    849
UN18053        --> GGCACTCATCAATTATCATAATGACCAATACATGAGTTGTTTTGGGTCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX775541       <-- GGCACTCATCAATTATCATAATGAGCAATACATGAGTTGTTTTGGGcc..
FD547382       <-- GGt...............................................
FD572695       <-- GGCACTCATCAATTATCATAATGACCAATACATGAGTTGTTTTGGGTC..
EX776986       <-- GGCACTCATCAATTATCATAATGAGCAATACATGAGTTGTTTTGGGTttg
EX899003       <-- GGCACTCATCAATTATCATAATGACCAATACATGAGTTGTTTTGGGTCT.
EW729244       <-- GGCACTCATCAATTATCATAATGACCAATACATGAGTTGTTTTGGGTCTA
EY894000       <-- GGCACTCATCAATTATCATAATGACCAATACATGAGTTGTTTTGGGTCTA
EX892629       <-- GGCGCTCATCAATTATCATAATGACCAATACATGAGTTGT..........
FD567375       <-- GGCACTCATCAATTATCATAATGACCAATACATGAGTTGTTTTGGGTTTA
FD535536       --> ..................................................
FD568336       --> ..................................................
EX773144       --> ..................................................
EX894717       --> ..................................................
EY897787       --> ..................................................
EX888741       --> ..................................................
FD551496       --> ..................................................
EW726607       --> ..................................................
EX771514       --> ..................................................
EV529096       --> GGCACTCATCAATTATCATAATGACCAATACATGAGTTGTTTT.......

               849    -    899
UN18053        --> AGATATTTCTGATCTTTATTCTTACACATTGAATAACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX775541       <-- ......................................
FD547382       <-- ......................................
FD572695       <-- ......................................
EX776986       <-- ......................................
EX899003       <-- ......................................
EW729244       <-- AGATATTTCTGATCTTTATTCTTACACATTGAATAAC.
EY894000       <-- AGATATTTCcg...........................
EX892629       <-- ......................................
FD567375       <-- AGATATTTCTGATCTTTATTCTTACACATTGAATAACC
FD535536       --> ......................................
FD568336       --> ......................................
EX773144       --> ......................................
EX894717       --> ......................................
EY897787       --> ......................................
EX888741       --> ......................................
FD551496       --> ......................................
EW726607       --> ......................................
EX771514       --> ......................................
EV529096       --> ......................................