1      -     51
UN18064        --> CGACCAATGTTTTCCTTTAACATTGCAAATTTCATTCAATGTCATAAGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX754288       <-- ..................................................
FD940670       <-- ..................................................
FY452894       <-- ..................................................
FY446143       <-- ..................................................
FY442362       <-- ..................................................
FY448627       <-- ..................................................
FY437785       <-- ..................................................
FY443308       <-- ..................................................
FY453118       <-- ..................................................
EV551461       <-- ..................................................
FD569955       <-- ..................................................
EX902158       <-- ..................................................
FD571674       <-- ..................................................
FD570378       <-- ..................................................
FY447505       <-- ..................................................
EV541679       --> CGACCAATGTTTTCCTTTAACATTGCAAATTTCATTCAATGTCATAAGCC
EX758646       --> ..ACCAATGTTTTCCTTTAACATTGCAAATTTCATTCAATGTCATAAGCC
EX901946       --> .aACCAATGTTTTCCTTTAACATTGCAGATTTCA----ATGTCATAAGCC
FD945697       --> ..................................................
EV546554       --> ..................................................
EX901433       --> ..................................................
FD574395       --> ..................................................
FD944504       --> ..................................................
FY437549       --> ..................................................
FD574054       --> ..................................................
FY443698       --> ..................................................
FD936493       --> ..................................................
FY444536       --> ..................................................

               51     -    101
UN18064        --> TCGGTTTGTTTCGTTCACGCATCCTTTTAGTTTTAGTCAAAAAGTCATAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX754288       <-- ..................................................
FD940670       <-- ..................................................
FY452894       <-- ..................................................
FY446143       <-- ..................................................
FY442362       <-- ..................................................
FY448627       <-- ..................................................
FY437785       <-- ..................................................
FY443308       <-- ..................................................
FY453118       <-- ..................................................
EV551461       <-- ..................................................
FD569955       <-- ..................................................
EX902158       <-- ..................................................
FD571674       <-- ..................................................
FD570378       <-- ..................................................
FY447505       <-- ..................................................
EV541679       --> TCGGTTTGTTTCGTTCACGCATCCTTTTAGTTTTAGTCAAAAAGTCATAA
EX758646       --> TCGGTTTGTTTCGTTCACGCATCCTTTTAGTTTTAGTCAAAAAGTCATAA
EX901946       --> TCGGTTTGTTTCGTTCACGCATCCTTTTAGTTTTAGTCAAAAAGTCATAA
FD945697       --> ...........CGTTCACGCATCCTTTTAGTTTTAGTCAAAAAGTCATAA
EV546554       --> ..................................AGTCAAAAAGTCATAA
EX901433       --> ..................................................
FD574395       --> ..................................................
FD944504       --> ..................................................
FY437549       --> ..................................................
FD574054       --> ..................................................
FY443698       --> ..................................................
FD936493       --> ..................................................
FY444536       --> ..................................................

               101    -    151
UN18064        --> GGAAGTATATGATACCAACAGAAAAGAATCCTTAGTGTATAAACCAAGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX754288       <-- ..................................................
FD940670       <-- ..................................................
FY452894       <-- ..................................................
FY446143       <-- ..................................................
FY442362       <-- ..................................................
FY448627       <-- ..................................................
FY437785       <-- ..................................................
FY443308       <-- ..................................................
FY453118       <-- ..................................................
EV551461       <-- ..................................................
FD569955       <-- ..................................................
EX902158       <-- ..................................................
FD571674       <-- ..................................................
FD570378       <-- ..................................................
FY447505       <-- ..................................................
EV541679       --> GGAAGTATATGATACCAACAGAAAAGAATCCTTAGTGTATAAACCAAGGA
EX758646       --> GGAAGTATATGATACCAACAGAAAAGAATCCTTAGTGTATAAACCAAGGA
EX901946       --> GGAAGTATATGATACCAACAGAAAAGAATCCTTAGTGTATAAACCAAGGA
FD945697       --> GGAAGTATATGATACCAACAGAAAAGAATCCTTAGTGTATAAACCAAGGA
EV546554       --> GGAAGTATATGATACCAACAGAAAAGAATCCTTAGTGTATAAACCAAGGA
EX901433       --> ..................................................
FD574395       --> ..................................................
FD944504       --> ..................................................
FY437549       --> ..................................................
FD574054       --> ..................................................
FY443698       --> ..................................................
FD936493       --> ..................................................
FY444536       --> ..................................................

               151    -    201
UN18064        --> ACATGTTTTTTTTTCCTTTTATTAGACAAAACAAGAAATATATCGTCTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX754288       <-- ..................TTATTAGACAAAACAAGAAATATATCGTCTGG
FD940670       <-- ..................................................
FY452894       <-- ..................................................
FY446143       <-- ..................................................
FY442362       <-- ..................................................
FY448627       <-- ..................................................
FY437785       <-- ..................................................
FY443308       <-- ..................................................
FY453118       <-- ..................................................
EV551461       <-- ..................................................
FD569955       <-- ..................................................
EX902158       <-- ..................................................
FD571674       <-- ..................................................
FD570378       <-- ..................................................
FY447505       <-- ..................................................
EV541679       --> ACATGTTTTTTTT-CCTTTTATTAGACAAAACAAGAAATATATCGTCTGG
EX758646       --> ACATGTTTTTTTTTCCTTTTATTAGACAAAACAAGAAATATATCGTCTGG
EX901946       --> ACATGTTTTTTTTTCCTTTTATTAAACAAAACAAGAAATATATCGTCTGG
FD945697       --> ACATGTTTTTTTTTCCTTTTATTAAACAAAACAAAAAATATATCGTCTGG
EV546554       --> ACATGTTTTTTTTTCCTTTTATTAGACAAAACAAGAAATATATCGTCTGG
EX901433       --> .......................aaACAAAACAAGAAATATATCGTCTGG
FD574395       --> .......................aaACAAAACAAGAAATATATCGTCTGG
FD944504       --> .......................aaACAAAACAAGAAATATATCGTCTGG
FY437549       --> .........................gacAAACAAGAAATATATCGTCTGG
FD574054       --> ....................................AATATATCGTCTGG
FY443698       --> ...........................................CGTCTGG
FD936493       --> ..................................................
FY444536       --> ..................................................

               201    -    251
UN18064        --> CTATAGTTTAGGCAACGCGGGTAACTGCAGCATGTATAGCTTCGACCAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX754288       <-- CTATAGTTTAGCCAACGCGGGTAACTGCAGCATGTATAGCTTCGACCAGG
FD940670       <-- ..................................................
FY452894       <-- ..................................................
FY446143       <-- ..................................................
FY442362       <-- ..................................................
FY448627       <-- ..................................................
FY437785       <-- ..................................................
FY443308       <-- ..................................................
FY453118       <-- ..................................................
EV551461       <-- ..................................................
FD569955       <-- ..................................................
EX902158       <-- ..................................................
FD571674       <-- ..................................................
FD570378       <-- ..................................................
FY447505       <-- ..................................................
EV541679       --> CTATAGTTTAGCCAACGCGGGTAACTGCAGCATGTATAGCTTCGACCAGG
EX758646       --> CTATAGTTTAGCCAACGCGGGTAACTGCAGCATGTATAGCTTCGACCAGG
EX901946       --> CTATAGTTTAGGCAACGCGGGTAACTGCAGCATGTATAGCTTCGACCAGG
FD945697       --> CTATAGTTTAGGCAACGCGGGTAACTGCAGCATGTATAGCTTCCACCAGG
EV546554       --> CTATAGTTTAGGCAACACGGGTAACTGCAGCATGTATAGCTTCGACCAGG
EX901433       --> CTATAGTTTAGGCAACGCGGGTAACTGCAGCATGTATAGCTTCGACCAGG
FD574395       --> CTATAGTTTAGGCAACGCGGGTAACTGCAGCATGTATAGCTTCCACCAGG
FD944504       --> CTATAGTTTAGGCAACGCGGGTAACTGCAGCATGTATAGCTTCGACCAGG
FY437549       --> CTATAGTTTAGGCAACGCGGGTAACTGCAGCATGTATAGCTTCGACCAGG
FD574054       --> CTATAGTTTAGGCAACGCGGGTAACTGCAGCATGTATAGCCTCGACCAGG
FY443698       --> CTATAGTTTAGGCAACGCGGGTAACTGCAGCATGTATAGCTTCGACCAGG
FD936493       --> ..................................................
FY444536       --> ..................................................

               251    -    301
UN18064        --> TGAGGCACCGTCTTCGAACTGAGGCCTGCCATGCTTATTCTCCCGTCAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX754288       <-- TGAGGCACCGTCTTCGAACTGAGGCCTGCCATGCTTATTCTCCCGTCAGA
FD940670       <-- ..................................................
FY452894       <-- ..................................................
FY446143       <-- ..................................................
FY442362       <-- ..................................................
FY448627       <-- ..................................................
FY437785       <-- ..................................................
FY443308       <-- ..................................................
FY453118       <-- ..................................................
EV551461       <-- ..................................................
FD569955       <-- ..................................................
EX902158       <-- ..................................................
FD571674       <-- ..................................................
FD570378       <-- ..................................................
FY447505       <-- ..................................................
EV541679       --> TGAGGCACCGTCTTCGAACTGAGGCCTGCCATGCTTATTCTCCCGTCAAA
EX758646       --> TGAGGCACCGTCTTCGAACTGAGGCCTGCCATGCTTATTCTCCCGTCAGA
EX901946       --> TGAGGCACCGTCTTCGAACTGAGGCCTGCCATGCTTATTCTCCCGTCAAA
FD945697       --> TGAGGCACCGTCTTCGAACTGAGGCCTGCCATGCTTATTCTCCCGTCAGA
EV546554       --> TGAGGCACCGTCTTCGAACTGAGGCCTGCCATGCTTATTCTCCCGTCAGA
EX901433       --> TGAGGCGCCGTCTTCGAACTGAGGCCTGCCATGCTTATTCTCCCGTCAAA
FD574395       --> TGAGGCACCGTCTTCGAACTGAGGCCTGCCATGCTTATTCTCCCGTCAAA
FD944504       --> TGAGGCACCGTCTTCGAACTGAGGCCTGCCATGCTTATTCTCCCGTCAAA
FY437549       --> TGAGGCACCGTCTTCGAACTGAGGCCTGCCATGCTTATTCTCCCGTCAGA
FD574054       --> TGAGGCACCGTCTTCGAACTGAGGCCTGCCATGCTTATTCTCCCGTCAAA
FY443698       --> TGAGGCACCGTCTTCGAACTGAGGCCTGCCATGCTTATTCTCCCGTCAGA
FD936493       --> ..................................................
FY444536       --> ..................................................

               301    -    351
UN18064        --> CGTCATGTAAATGTGATACTCTTTGGTCATGAAGGCAACTTGCTCCTTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX754288       <-- CGTCATGTAAATGTGATACTCTTTGGTCATGAAGGCAACTTGCTCCTTGT
FD940670       <-- ..................................................
FY452894       <-- ..................................................
FY446143       <-- ..................................................
FY442362       <-- ..................................................
FY448627       <-- ..................................................
FY437785       <-- ..................................................
FY443308       <-- ..................................................
FY453118       <-- ..................................................
EV551461       <-- ..................................................
FD569955       <-- ..................................................
EX902158       <-- ..................................................
FD571674       <-- ..................................................
FD570378       <-- ..................................................
FY447505       <-- ..................................................
EV541679       --> CGTCATGTAAATGTGATACTCTTTGGTCATGAAGGCAACTTGCTCCTTGT
EX758646       --> CGTCATGTAAATGTGATACTCTTTGGTCATGAAGGCAACTTGCTCCTTGT
EX901946       --> CGTCATGTAAATGTGATACTCTTTGGTCATGAAGGCAACTTGCTCCTTGT
FD945697       --> CGTCATGTAAATGTGATACTCTTTGGTCATGAAGGCAACTTGCTCCTTGT
EV546554       --> CGTCATGTAAATGTGATACTCTTTGGTCATGAAGGCAACTTGCTCCTTGT
EX901433       --> CGTCATGTAAATGTGATACTCTTTGGTCATGAAGGCAACTTGCTCCTTGT
FD574395       --> CGTCATGTAAATGTGATACTCTTTGGTCATGAAGGCAACTTGCTCCTTGT
FD944504       --> CGTCATGTAAATGTGATACTCTTTGGTCATGAAGGCAACTTGCTCCTTGT
FY437549       --> CGTCATGTAAATGTGATACTCTTTGGTCATGAAGGCAACTTGCTCCTTGT
FD574054       --> CGTCATGTAAATGTGATACTCTTTGGTCATGAAGGCAACTTGCTCCTTGT
FY443698       --> CGTCATGTAAATGTGATACTCTTTGGTCATGAAGGCAACTTGCTCCTTGT
FD936493       --> ........................GGTCATGAAGGCAACTTGCTCCTTGT
FY444536       --> ..................................................

               351    -    401
UN18064        --> TCAATCCAGTAAAAGTGAACATCCCAATCTGTTTTATAATGTGACTCCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX754288       <-- TCAATCCAGTAAAAGTGAACATCCCAATCTGTTTTATAATGTGACTCCAA
FD940670       <-- ..................................................
FY452894       <-- ..................................................
FY446143       <-- ..................................................
FY442362       <-- ..................................................
FY448627       <-- ..................................................
FY437785       <-- ..................................................
FY443308       <-- ..................................................
FY453118       <-- ..................................................
EV551461       <-- ..................................................
FD569955       <-- ..................................................
EX902158       <-- ..................................................
FD571674       <-- ..................................................
FD570378       <-- ..................................................
FY447505       <-- ..................................................
EV541679       --> TCAATCCAGTAAAAGTGAACATCCCAATCTGTTTTATAATGTGACTCCAA
EX758646       --> TCAATCCAGTAAAAGTGAACATCCCAATCTGTTTTATAATGTGACTCCAA
EX901946       --> TCAATCCAGTAAAAGTGAACATCCCAATCTGTTTTATAATGTGACTCCAA
FD945697       --> TCAATCCAGTAAAAGTGAACATCCCAATCTGTTTTATAATGTGACTCCAA
EV546554       --> TCGATCCAGTAAAAGTGAACATCCCAATCTGTTTTATAATGTGACTCCAA
EX901433       --> TCAATCCAGTAAAAGTGAACATCCCAATCTGTTTTATAATGTGACTCCAA
FD574395       --> TCAATCCAGTAAAAGTGAACATCCCAATCTGTTTTATAATGTGACTCCAA
FD944504       --> TCAATCCAGTAAAAGTGAACATCCCAATCTGTTTTATGATGTGACTCCAA
FY437549       --> TCAATCCAGTAAAAGTGAACATCCCAATCTGTTTTATAATGTGACTCCAA
FD574054       --> TCAATCCAGTAAAAGTGAACATCCCAATCTGTTTTATAATGTGACTCCAA
FY443698       --> TCAATCCAGTAAAAGTGAACATCCCAATCTGTTTTATAATGTGACTCCAA
FD936493       --> TCAATCCAGTAAAAGTGAACATCCCAATCTGTTTTATAATGTGACTCCAA
FY444536       --> ..................................................

               401    -    451
UN18064        --> TCACCAGGTGTGCCTTTAGCTTGTAAAGCTTCAAATAGCTGTTGGCGCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX754288       <-- TCACCAGGTGTGCCTTTAGCTTGTAGAGCTTCAAATAACTGGTGGCGCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD940670       <-- ..................................................  Raphanus sativus var. oleiformis
FY452894       <-- ..................................................  Raphanus sativus cv GSK3-1
FY446143       <-- ..................................................  Raphanus sativus cv GSK3-1
FY442362       <-- ..................................................  Raphanus sativus cv GSK3-1
FY448627       <-- ..................................................  Raphanus sativus cv GSK3-1
FY437785       <-- ..................................................  Raphanus sativus cv GSK3-1
FY443308       <-- ..................................................  Raphanus sativus cv GSK3-1
FY453118       <-- ..................................................  Raphanus sativus cv GSK3-1
EV551461       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD569955       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX902158       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD571674       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD570378       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FY447505       <-- ..................................................  Raphanus sativus cv GSK3-1
EV541679       --> TCACCAGGTGTGCCTTTAGCTTGTAGAGCTTCAAATAACTGGTGGCGCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX758646       --> TCACCAGGTGTGCCTTTAGCTTGTAAAGCTTCAAATAACTGGTGGCGCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX901946       --> TCACCAGGTGTGCCTTTAGCTTGTAAAGCTTCAAATAGCTGTTGGCGCAT  Raphanus sativus cv Early Scarlet Globe
FD945697       --> TCACCAGGTGTGCCTTTAGCTTGTAAAGCTTCAAATAGCTGTTGGCGCAT  Raphanus sativus cv Early Scarlet Globe
EV546554       --> TCACCAGGTGTGCCTTTAGCTTGTAGAGCTTCAAATAGCTGTTGGCGCAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX901433       --> TCACCAGGTGTGCCTTTAGCTTGTAAAGCTTCAAATAGCTGTTGGCGCAT  Raphanus sativus cv Early Scarlet Globe
FD574395       --> TCACCGGGTGTGCCTTTAGCTTGTAAAGCTTCAAGTAGCTGTTGGCGCAT  Raphanus sativus cv Early Scarlet Globe
FD944504       --> TCACCAGGTGTGCCTTTAGCTTGTAAAGCTTCAAATAGCTGTTGGCGCAT  Raphanus sativus cv Early Scarlet Globe
FY437549       --> TCACCAGGTGTGCCTTTAGCTTGTAGAGCTTCAAATAGCTGTTGGCGCAT  Raphanus sativus cv GSK3-1
FD574054       --> TCACCAGGTGTGCCTTTAGCTTGTAAAGCTTCAAATAGCTGTTGGCGCAT  Raphanus sativus cv Early Scarlet Globe
FY443698       --> TCACCAGGTGTGCCTTTAGCTTGTAGAGCTTCAAATAGCTGTTGGCGCAT  Raphanus sativus cv GSK3-1
FD936493       --> TCACCAGGTGTGCCTTTAGCTTGTAGAGCTTCAAATAGCTGTTGGCGCAT  Raphanus sativus var. oleiformis
FY444536       --> ..................................................  Raphanus sativus cv GSK3-1

               451    -    501
UN18064        --> GCTAATAATGCGGTCAGCCATTCCTTTCAGCTCGATGGTCCAGTCGTTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX754288       <-- GCTAATAATGCGGTCAGCCATTCCTTTCAGCTCGATGGTCCAGTCGTTGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD940670       <-- ...........................................TCGTTAT  Raphanus sativus var. oleiformis
FY452894       <-- ..................................................  Raphanus sativus cv GSK3-1
FY446143       <-- ..................................................  Raphanus sativus cv GSK3-1
FY442362       <-- ..................................................  Raphanus sativus cv GSK3-1
FY448627       <-- ..................................................  Raphanus sativus cv GSK3-1
FY437785       <-- ..................................................  Raphanus sativus cv GSK3-1
FY443308       <-- ..................................................  Raphanus sativus cv GSK3-1
FY453118       <-- ..................................................  Raphanus sativus cv GSK3-1
EV551461       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD569955       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX902158       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD571674       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD570378       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FY447505       <-- ..................................................  Raphanus sativus cv GSK3-1
EV541679       --> GCTAATAATGCGGTCAGCCATTCCTTTCAGCTCGATGGTCCAGTCGTTGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX758646       --> GCTAATAATGCGGTCAGCCATTCCTTTCAGCTCGATGGTCCAGTCGTTGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX901946       --> GCTAATAATGCGGTCAGCCATTCCTTTCAGCTCGATGGTCCAGTCGTTGT  Raphanus sativus cv Early Scarlet Globe
FD945697       --> GCTAATAATGCGGTCAGCCATTCCTTTCAGCTCGATGGTCCAGTCGTCGT  Raphanus sativus cv Early Scarlet Globe
EV546554       --> GCTAATAATGCGGTCGGCCATTCCTTTCAGCTCGATGGTCCAGTCGTTAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX901433       --> GCTAATAATGCGGTCAGCCATTCCTTTCAGCTCGATGGTCCAGTCGCTAT  Raphanus sativus cv Early Scarlet Globe
FD574395       --> GCTAATAATGCGGTCAGCCATTCCTTTCAGCTCGATGGTCCAGTCGTTAT  Raphanus sativus cv Early Scarlet Globe
FD944504       --> GCTAATAATGCGGTCAGCCATTCCTTTCAGCTCGATGGTCCAGTCGTTAT  Raphanus sativus cv Early Scarlet Globe
FY437549       --> GCTAATAATGCGGTCAGCCATTCCTTTCAGCTCGATGGTCCAGTCGTTAT  Raphanus sativus cv GSK3-1
FD574054       --> GCTAATAATGCGGTCAGCCATTCCTTTCAGCTCGATGGTCCAGTCGTTAT  Raphanus sativus cv Early Scarlet Globe
FY443698       --> GCTAATAATGCGGTCAGCCATTCCTTTCAGCTCGATGGTCCAGTCGTTAT  Raphanus sativus cv GSK3-1
FD936493       --> GCTAATAATGCGGTCAGCCATTCCTTTCAGCTCGATGGTCCAGTCGTTAT  Raphanus sativus var. oleiformis
FY444536       --> ..................................................  Raphanus sativus cv GSK3-1

               501    -    551
UN18064        --> ACATATCACTGCTTTTCAGAATGGTGGCAACAATTGATGCTCCATGAATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX754288       <-- ACATATCACTGCTTTTCAGGATGGTGGCAACAATTGATGCTCCATGAATA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD940670       <-- ACATATCACTGCTTTTCAGAATGGTGGCAACAATTGATGCTCCATGAATA  Raphanus sativus var. oleiformis
FY452894       <-- ..................................................  Raphanus sativus cv GSK3-1
FY446143       <-- ..................................................  Raphanus sativus cv GSK3-1
FY442362       <-- ..................................................  Raphanus sativus cv GSK3-1
FY448627       <-- ..................................................  Raphanus sativus cv GSK3-1
FY437785       <-- ..................................................  Raphanus sativus cv GSK3-1
FY443308       <-- ..................................................  Raphanus sativus cv GSK3-1
FY453118       <-- ..................................................  Raphanus sativus cv GSK3-1
EV551461       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD569955       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX902158       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD571674       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD570378       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FY447505       <-- ..................................................  Raphanus sativus cv GSK3-1
EV541679       --> ACATATCACTGCTTTTCAGGATGGTGGCAACAATTGATGCTCCATGAATA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX758646       --> ACATATCACTGCTTTTCAGGATGGTGGCAACAATTGATGCTCCATGAATA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX901946       --> ACATATCACTGCTTTTCAAAATGGTGGCAACAATTGATGCTCCATGAATA  Raphanus sativus cv Early Scarlet Globe
FD945697       --> ACATATCACTGCTTTTCAAAATGGTGGCAACAATTGATGCTCCATGAATA  Raphanus sativus cv Early Scarlet Globe
EV546554       --> ACATATCACTGCTTTTCAGAATGGTGGCAACAATTGATGCTCCATGAATA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX901433       --> ACATATCACTGCTTTTCAAAATGGTGGCAACAATTGATGCTCCATGAATG  Raphanus sativus cv Early Scarlet Globe
FD574395       --> ACATATCACTGCTTTTCAAAATGGTGGCAACAATTGATGCTCCATGAATA  Raphanus sativus cv Early Scarlet Globe
FD944504       --> ACATATCACTGCTTTTCAAAATGGTGGCAACAATTGATGCTCCATGAATA  Raphanus sativus cv Early Scarlet Globe
FY437549       --> ACATATCACTGCTTTTCAGAATGGTGGCAACAATTGATGCTCCATGAATA  Raphanus sativus cv GSK3-1
FD574054       --> ACATATCACTGCTTTTCAAAATGGTGGCAACAATTGATGCTCCATGAATA  Raphanus sativus cv Early Scarlet Globe
FY443698       --> ACATATCACTGCTTTTCAGAATGGTGGCAACAATTGATGCTCCATGAATA  Raphanus sativus cv GSK3-1
FD936493       --> ACATATCACTGCTTTTCAGAATGGTGGCAACAATTGATGCTCCATGAATA  Raphanus sativus var. oleiformis
FY444536       --> ..................................................  Raphanus sativus cv GSK3-1

               551    -    601
UN18064        --> GGTGGACTCGAATACATGGGTCGCACAACAAGTTTCACCTGGCTCTCAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX754288       <-- GGTGGGCTCGAGTACATGGGTCGCACAACAAGTTTCACCTGGCTCTCAAC
FD940670       <-- GGTGGACTCGAATACATGGGTCGCACAACAAGTTTCACCTGGCTCTCAAC
FY452894       <-- ..................................................
FY446143       <-- ..................................................
FY442362       <-- ..................................................
FY448627       <-- ..................................................
FY437785       <-- ..................................................
FY443308       <-- ..................................................
FY453118       <-- ..................................................
EV551461       <-- ..................................................
FD569955       <-- ..................................................
EX902158       <-- ..................................................
FD571674       <-- ..................................................
FD570378       <-- ..................................................
FY447505       <-- ..................................................
EV541679       --> GGTGGGCTCGAGTACATGGGTCGCACAACAAGTTTCACCTGGCTCTCAAC
EX758646       --> GGTGGGCTCGAGTACATGGGTCGCACAACAAGTTTCACCTGGCTCTCAAC
EX901946       --> GATGGACTCGAATACATGGGTCGCACAACAAGTTTCACCTGGCTCTCAAC
FD945697       --> GGTGGACTCGAATACATGGGTCGCACAACAAGTTTCACATGGCTCTCAAC
EV546554       --> GGTGGACTCGAATACATGGGTCGCACAACAAGTTTCACCTGGCTCTCAAC
EX901433       --> GGTGGACTCGAATACATGGGTCGCACAACAAGTTTCACCTGGCTCTCAAC
FD574395       --> GGTGGACTCGAATACATGGGTCGCACAACAAGTTTCACCTGGCTCTCAAC
FD944504       --> GGTGGACTCGAATACATGGGTCGCACAACAAGTTTCACCTGGCTCTCAAC
FY437549       --> GGTGGACTCGAATACATGGGTCGCACAACAAGTTTCACCTGGCTCTCAAC
FD574054       --> GGTGGACTCGAATACATGGGTCGCACAACAAGTTTCACCTGGCTCTCAAC
FY443698       --> GGTGGACTCGAATACATGGGTCGCACAACAAGTTTCACCTGGCTCTCAAC
FD936493       --> GGTGGACTCGAATACATGGGTCGCACAACAAGTTTCACCTGGCTCTCAAC
FY444536       --> ..................................................

               601    -    651
UN18064        --> CTTACTAGCCACATCTGCCGACTTGCAGACAATGCTAAGGGCACCAACAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX754288       <-- CTTACTAGCCACATCTGCCGACTTGCAGACAATGCTAAGGGCACCAACAC
FD940670       <-- CTTACTAGCCACATCTGCCGACTTGCAGACAATGCTAAGGGCACCAACAC
FY452894       <-- ...ACTAGCCACATCTGCCGACTTGCAGACAATGCTAAGGGCACCAACAC
FY446143       <-- ....CTAGCCACATCTGCCGACTTGCAGACAATGCTAAGGGCACCAACAC
FY442362       <-- ........................GCAGACAATGCTAAGGGCACCAACAC
FY448627       <-- ...........................GACAATGCTAAGGGCACCAACAC
FY437785       <-- ......................................GGGCACCAACAC
FY443308       <-- ......................................GGGCACCAACAC
FY453118       <-- ..........................................ACCAACAC
EV551461       <-- ..................................................
FD569955       <-- ..................................................
EX902158       <-- ..................................................
FD571674       <-- ..................................................
FD570378       <-- ..................................................
FY447505       <-- ..................................................
EV541679       --> CTTACTAGCCACATCTGCCGACTTGCAGACAATGCTAAGGGCACCAACAC
EX758646       --> CTTACTAGCCACATCTGCCGACTTGCAGACAATGCTAAGGGCACCAACAC
EX901946       --> CTTACTAACCACATCTGCCGACTTGCAGACAATGCTAAGGGCACCAACAC
FD945697       --> CTTACTAGCCACATCTGCCGACTTGCAAACAAT.................
EV546554       --> CTTACTAGCCACATCTGCCGACTTGCAGACAATGCTAAGGGCACCAACAC
EX901433       --> CTTACTAGCCACATCTGCCGACTTGCAAACAATGCTAAGGGCACCAACAC
FD574395       --> CTTACTAGCCACATCTGCCGACTTGC........................
FD944504       --> CTTACTAGCCACATCTGCCGACTTGCAGACAATGCTAAGGGCACCAACAC
FY437549       --> CTTACTAGCCACATCTGCCGACTTGCAGACAATGCTAAGGGCACCAACAC
FD574054       --> CTTACTAGCCACATCTGCCGACTTGCAGACAATGCTAAGGGCACCAACAC
FY443698       --> CTTACTAGCCACATCTGCCGACTTGCAGACAATGCTAAGGGCACCAACAC
FD936493       --> CTTACTAGCCACATCTGCCGACTTGCAGACAATGCTAAGGGCACCAACAC
FY444536       --> ..................................................

               651    -    701
UN18064        --> GCTCCCCATAAAGTCCCATATTTTTGGCATAACTTTGAGCTATCAAGCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX754288       <-- GCTCCCCATAAAGTCCCATATTTTTGGCATAACTTTGAGCTATCAAGCAT
FD940670       <-- GCTCCCCATAAAGTCCCATATTTTTGGCATAACTTTGAGCTATCAAGCAT
FY452894       <-- GCTCCCCATAAAGTCCCATATTTTTGGCATAACTTTGAGCTATCAAGCAT
FY446143       <-- GCTCCCCATAAAGTCCCATATTTTTGGCATAACTTTGAGCTATCAAGCAT
FY442362       <-- GCTCCCCATAAAGTCCCATATTTTTGGCATAACTTTGAGCTATCAAGCAT
FY448627       <-- GCTCCCCATAAAGTCCCATATTTTTGGCATAACTTTGAGCTATCAAGCAT
FY437785       <-- GCTCCCCATAAAGTCCCATATTTTTGGCATAACTTTGAGCTATCAAGCAT
FY443308       <-- GCTCCCCATAAAGTCCCATATTTTTGGCATAACTTTGAGCTATCAAGCAT
FY453118       <-- GCTCCCCATAAAGTCCCATATTTTTGGCATAACTTTGAGCTATCAAGCAT
EV551461       <-- ..................................................
FD569955       <-- ..................................................
EX902158       <-- ..................................................
FD571674       <-- ..................................................
FD570378       <-- ..................................................
FY447505       <-- ..................................................
EV541679       --> GCTCCCCATAAAGTCCCATATTTTTGGCATAACTTTGAGCTATCAAGCAT
EX758646       --> GCTCCCCATAAAGTCCCATATTTTTGGCATAACTTTGAGCTATCAAGCAT
EX901946       --> GCTCCCCATAAAGTCCCATATTTTTGGCATAACTTTGAGCTATCAAGCAT
FD945697       --> ..................................................
EV546554       --> GCTCCCCATAAAGTCCCATATTTTTGGCATAACTTTGAGCTATCAAGCAT
EX901433       --> GCTCCCCATAAAGTCCCATATTTTTGGCATAACTTTGAGCTATCAAGCAT
FD574395       --> ..................................................
FD944504       --> GCTCCCCATAAAGTCCCATATTTTTGGCATAACTTTGAGCTATCAAGCAT
FY437549       --> GCTCCCCATAAAGTCCCATATTTTTGGCATAACTTTGAGCTATCAAGCAT
FD574054       --> GCTCCCCATAAAGTCCCATATTTTTGGCATAACTTTGAGCTATCAAGCAT
FY443698       --> GCTCCCCATAAAGTCCCATATTTTTGGCATAACTTTGAGCTATCAAGCAT
FD936493       --> GCTCCCCATAAAGTCCCATATTTTTGGCATAACTTTGAGCTATCAAGCAT
FY444536       --> ..................................................

               701    -    751
UN18064        --> TCACCGCCATCAGCAACAAAGGTGCGGACTGAATGTGCATCTGTGTCAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX754288       <-- TCACCGCCATCAGCAACAAAGGTGCGGACTGAATGTGCATCTGTGTCAAG
FD940670       <-- TCACCGCCATCAGCAACAAAGGTGCGGACTGAATGTGCGTCTGTGTCAAG
FY452894       <-- TCACCGCCATCAGCAACAAAGGTGCGGACTGAATGTGCATCTGTGTCAAG
FY446143       <-- TCACCGCCATCAGCAACAAAGGTGCGGACTGAATGTGCATCTGTGTCAAG
FY442362       <-- TCACCGCCATCAGCAACAAAGGTGCGGACTGAATGTGCATCTGTGTCAAG
FY448627       <-- TCACCGCCATCAGCAACAAAGGTGCGGACTGAATGTGCATCTGTGTCAAG
FY437785       <-- TCACCGCCATCAGCAACAAAGGTGCGGACTGAATGTGCATCTGTGTCAAG
FY443308       <-- TCACCGCCATCAGCAACAAAGGTGCGGACTGAATGTGCATCTGTGTCAAG
FY453118       <-- TCACCGCCATCAGCAACAAAGGTGCGGACTGAATGTGCATCTGTGTCAAG
EV551461       <-- .......................GCGGACTGAATGTGCATCTGTGTCAAG
FD569955       <-- ..................................................
EX902158       <-- ..................................................
FD571674       <-- ..................................................
FD570378       <-- ..................................................
FY447505       <-- ..................................................
EV541679       --> TCACCGCCATCGGCAACAAAGGTGCGGACTGAATGTGCATCTGTGTCAAG
EX758646       --> TCACCGCCATCAGC....................................
EX901946       --> TCACCGCCATCAGCAACAAAGGTGCGGACTGAATGTGCATCTGTGTCAAG
FD945697       --> ..................................................
EV546554       --> TCACCGCCATCAGCAACAAAGGTGCGGACTGAATGTGCATCTGTGTCAAG
EX901433       --> TCACCGCCATCGGCAACAAAGGTGCGGACTGAATGTGCATCCGTGTCAAG
FD574395       --> ..................................................
FD944504       --> TCACCGCCATCAGCAACAAAGGTGCGGACTGAATGTGCATCCGCGTCAAG
FY437549       --> TCACCGCCATCAGCAACAAAGGTGCGGACTGAATGTGCATCTGTGTCAAG
FD574054       --> TCACCGCCATCAGCAACAAAGGTGCGGACTGAATGTGCATCCGTGTCAAG
FY443698       --> TCACCGCCATCAGCAACAAAGGTGCGGACTGAATGTGCATCTGTGTCAAG
FD936493       --> TCACCGCCATCAGCAACAAAGGTGCGGACTGAATGTGCGTCTGTGTCAAG
FY444536       --> ..................................................

               751    -    801
UN18064        --> GCTACCACTAGCAAAACCCTGATATGCACTGTCAAAAAACGGTAACAAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX754288       <-- GCTACCACTAGCAAAACCCTGATATGCACTGTCAAAAAACGGTAACAAGC
FD940670       <-- GCTACCACTAGCAAAACCCTGATATGCACTGTCAAAAAACGGTAACAAGC
FY452894       <-- GCTACCACTAGCAAAACCCTGATATGCACTGTCAAAAAACGGTAACAAGC
FY446143       <-- GCTACCACTAGCAAAACCCTGATATGCACTGTCAAAAAACGGTAACAAGC
FY442362       <-- GCTACCACTAGCAAAACCCTGATATGCACTGTCAAAAAACGGTAACAAGC
FY448627       <-- GCTACCACTAGCAAAACCCTGATATGCACTGTCAAAAAACGGTAACAAGC
FY437785       <-- GCTACCACTAGCAAAACCCTGATATGCACTGTCAAAAAACGGTAACAAGC
FY443308       <-- GCTACCACTAGCAAAACCCTGATATGCACTGTCAAAAAACGGTAACAAGC
FY453118       <-- GCTACAACTAGCAAAACCCTGATATGCACTGTCAAAAAACGGTAACAAGC
EV551461       <-- GCTACCACTAGCAAAACC-TGATATGCACTGTCAAAAAACGGTAACAAGC
FD569955       <-- .......CTAGCAAAACC-TGATATGCACTGTCAAAAA-CGGTAACAAGC
EX902158       <-- ......................TATGCACTGTCAAAAA-CGGTAACAAGC
FD571674       <-- .........................GCACTGTCAAAAAACGGTAACAAGC
FD570378       <-- ..................................tcaaaaacgtACAAGC
FY447505       <-- ..................................................
EV541679       --> GCTACCACTAGCAAAACCCTGATATGCACTGTCAAAAAACGGTAACAAGC
EX758646       --> ..................................................
EX901946       --> GCTACCACTAGCAAAACCCTGATATGCACTGTCAAAAGACGGTAACAAGC
FD945697       --> ..................................................
EV546554       --> GCTACCACTAGCAAAACCCTGATATGCACTGTCAAAAAACGGTAACAAGC
EX901433       --> GCTACCACTAGCAAAACCCTGATATGCACTGTCAAAAAACGGTAACAAGC
FD574395       --> ..................................................
FD944504       --> GCTACCACTAGCAAAACCCTGATATGCACTGTCAAAAAACGGTAACAAGC
FY437549       --> GCTACCACTAGCAAAACCCTGATATGCACTGTCAAAAAACGGTAACAAGC
FD574054       --> GCTACCACTAGCAAAACCCTGATATGCACTGTCAAAAAACGGTAACAAGC
FY443698       --> GCTACCACTAGCAAAACCCTGATATGCACTGTCAAAAAACGGTAACAAGC
FD936493       --> GCTACCACTAGCAAAACCCTGATATGCACTGTCAAAAAACGGTAACAAGC
FY444536       --> ..................................................

               801    -    851
UN18064        --> TTTTAGATCTCACTAGTTGTCGAATCTGTTCCCACTGTTCAGAGGTTGGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX754288       <-- TTTTAGATCTCACTAGTTGTCGAATCTGTTCCCACTGTTCAGAGGTTGc.  Raphanus raphanistrum subsp. raphanistrum (MS)
FD940670       <-- TTTTAGATCTCACTAGTTGTCGAATCTGTTCCCACTGTTCAGAGGTTGGG  Raphanus sativus var. oleiformis
FY452894       <-- TTTTAGATCTCACTAGTTGTCGAATCTGTTCCCACTGTTCAGAGGTTGGG  Raphanus sativus cv GSK3-1
FY446143       <-- TTTTAGATCTCACTAGTTGTCGAATCTGTTCCCACTGTTCAGAGGTTGGG  Raphanus sativus cv GSK3-1
FY442362       <-- TTTTAGATCTCACTAGTTGTCGAATCTGTTCCCACTGTTCAGAGGTTGGG  Raphanus sativus cv GSK3-1
FY448627       <-- TTTTAGATCTCACTAGTTGTCGAATCTGTTCCCACTGTTCAGAGGTTGGG  Raphanus sativus cv GSK3-1
FY437785       <-- TTTTAGATCTCACTAGTTGTCGAATCTGTTCCCACTGTTCAGAGGTTGGG  Raphanus sativus cv GSK3-1
FY443308       <-- TTTTAGATCTCACTAGTTGTCGAATCTGTTCCCACTGTTCAGAGGTTGGG  Raphanus sativus cv GSK3-1
FY453118       <-- TTTTAGATCTCACTAGTTGTCGAATCTGTTCCCACTGTTCAGAGGTTGGG  Raphanus sativus cv GSK3-1
EV551461       <-- TTTTAGATCTCACTAGTTGTCGAATCTGTTCCCACTGTTCAGAGGTTGGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD569955       <-- TTT-AGATCTCACTAGT-GTCGAATCTGTTCCCACTGTTCAGAGGTAGGG  Raphanus sativus cv Early Scarlet Globe
EX902158       <-- TTTTAGATCTCACTAGTTGTCGAATCTGTTCCCACTGTTCAGAGGTAGGG  Raphanus sativus cv Rat-Tail Radish #3870
FD571674       <-- TTTTAGATCTCACTAGTTGTCGAATCTGTTCCCACTGTTCAGAGGTAGGG  Raphanus sativus cv Early Scarlet Globe
FD570378       <-- TTT-AGATCTCACTAGTTGTCGAATCTGT-CCCACTGT-CAGAGGTAGGG  Raphanus sativus cv Early Scarlet Globe
FY447505       <-- ..................................................  Raphanus sativus cv GSK3-1
EV541679       --> TTTTAGATCTCACTAGTTGTCGAATCTGTTCCCACTGTTCAGAGGTTGGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX758646       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX901946       --> TTTTAGATCTCACTAGTTGT..............................  Raphanus sativus cv Early Scarlet Globe
FD945697       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV546554       --> TTTTAGATCTCACTAGTTGTCGAATCTGTTCCCACTGTTCAGAGGTTGGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX901433       --> TTTTAGATCTCACTAGTTGTCGAATCTGTTCCCACTGTTCAGAGGTAGGG  Raphanus sativus cv Early Scarlet Globe
FD574395       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD944504       --> TTTTAGATCTCACTAGTTGTCGAATCTGTTCCCACTGTTCAGAGGTAGGG  Raphanus sativus cv Early Scarlet Globe
FY437549       --> TTTTAGATCTCACTAGTTGTCGAATCTGTTCCCACTGTTCAGAGGTTGGG  Raphanus sativus cv GSK3-1
FD574054       --> TTTTAGATCTCACTAGTTGTCGAATCTGTTCCCACTGTTCAGAGGTAGGG  Raphanus sativus cv Early Scarlet Globe
FY443698       --> TTTTAGATCTCACTAGTTGTCGAATCTGTTCCCACTGTTCAGAGGTTGGG  Raphanus sativus cv GSK3-1
FD936493       --> TTTTAGATCTCACTAGTTGTCGAATCTGTTCCCACTGTTCAGAGGTTGGG  Raphanus sativus var. oleiformis
FY444536       --> ..................................................  Raphanus sativus cv GSK3-1

               851    -    901
UN18064        --> TCAACTCCAGTGGGATTGTGAGCACATGCATGAAGTAAGACAATCGCTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX754288       <-- ..................................................
FD940670       <-- TCAACTCCAGTGGGATTGTGAGCACATGCATGAAGTAAGACAATCGCTCC
FY452894       <-- TCAACTCCAGTGGGATTGTGAGCACATGCATGAAGTAAGACAATCGCTCC
FY446143       <-- TCAACTCCAGTGGGATTGTGAGCACATGCATGAAGTAAGACAATCGCTCC
FY442362       <-- TCAACTCCAGTGGGATTGTGAGCACATGCATGAAGTAAGACAATCGCTCC
FY448627       <-- TCAACTCCAGTGGGATTGTGAGCACATGCATGAAGTAAGACAATCGCTCC
FY437785       <-- TCAACTCCAGTGGGATTGTGAGCACATGCATGAAGTAAGACAATCGCTCC
FY443308       <-- TCAACTCCAGTGGGATTGTGAGCACATGCATGAAGTAAGACAATCGCTCC
FY453118       <-- TCAACTCCAGTGGGATTGTGAGCACATGCATGAAGTAAGACAATCGCTCC
EV551461       <-- TCAACTCCAGTGGGATTGTGAGCACATGCATGAAGTAAGACAATCGCTCC
FD569955       <-- TCAACTCCAGTGGGATTGTGAGCACATGCATGAAGTAAGACAATCGCTCC
EX902158       <-- TCAACTCCAGTGGGATTGTGAGCACATGCATGAAGTAAGACAATCGCTCC
FD571674       <-- TCAACTCCAGTGGGATTGTGAGCACATGCATGAAGTAAGACAATCGCTCC
FD570378       <-- TCAACTCCAGTGGGATTGTGAGCACATGCATGAAGTAAGACAATCGCTCC
FY447505       <-- ............GGATTGTGAGCACATGCATGAAGTAAGACAATCGCTCC
EV541679       --> TCAACTCCAGTGGGATTGTGAGCACATGCATGAAGTAAGACAATCGCT..
EX758646       --> ..................................................
EX901946       --> ..................................................
FD945697       --> ..................................................
EV546554       --> TCAACTCCAGTGGGATTGTGAGCACATGCATGAAGTAAGACAATCGCTCC
EX901433       --> TCAACTCCAGTGGGATTGTGGGCACATGCATGAAGTAAGACAATCGCTCC
FD574395       --> ..................................................
FD944504       --> TCAACT............................................
FY437549       --> TCAACTCCAGTGGGATTGTGAGCACATGCATGAAGTAAGACAATCGCTCC
FD574054       --> TCAACTCCAGTGGGATTGTGAGCACATGCATGAAG...............
FY443698       --> TCAACTCCAGTGGGATTGTGAGCACATGCATGAAGTAAGACAATCGCTCC
FD936493       --> TCAACTCCAGTGGGATTGTGAGCACATGCATGAAGTAAGACAATCGCTCC
FY444536       --> ..................................................

               901    -    951
UN18064        --> AGATGGTGCAGCGCCAAGATCCTCAAGCAAGCCTTGGAAGTCAAGTCCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX754288       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD940670       <-- AGATGGTGCAGCGCCAAGATCCTCAAGCAAGCCTTGGAAGTCAAGTCCAC  Raphanus sativus var. oleiformis
FY452894       <-- AGATGGTGCAGCGCCAAGATCCTCAAGCAAGCCTTGGAAGTCAAGTCCAC  Raphanus sativus cv GSK3-1
FY446143       <-- AGATGGTGCAGCGCCAAGATCCTCAAGCAAGCCTTGGAAGTCAAGTCCAC  Raphanus sativus cv GSK3-1
FY442362       <-- AGATGGTGCAGCGCCAAGATCCTCAAGCAAGCCTTGGAAGTCAAGTCCAC  Raphanus sativus cv GSK3-1
FY448627       <-- AGATGGTGCAGCGCCAAGATCCTCAAGCAAGCCTTGGAAGTCAAGTCCAC  Raphanus sativus cv GSK3-1
FY437785       <-- AGATGGTGCAGCGCCAAGATCCTCAAGCAAGCCTTGGAAGTCAAGTCCAC  Raphanus sativus cv GSK3-1
FY443308       <-- AGATGGTGCAGCGCCAAGATCCTCAAGCAAGCCTTGGAAGTCAAGTCCAC  Raphanus sativus cv GSK3-1
FY453118       <-- AGATGGTGCAGCGCCAAGATCCTCAAGCAAGCCTTGGAAGTCAAGTCCAC  Raphanus sativus cv GSK3-1
EV551461       <-- AGATGGTGCAGCGCCAAGATCCTCAAGCAAGCCTTGGAAGTCAGGTCCAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD569955       <-- AGATGGTGCAGCGCCAAGATCCTCAAGCAAGCCATGGAAGTCAAGTCCAC  Raphanus sativus cv Early Scarlet Globe
EX902158       <-- AGATGGTGCAGCGCCAAGATCCTCAAGCAAGCCATGGAAGTCAAGTCCAC  Raphanus sativus cv Rat-Tail Radish #3870
FD571674       <-- AGATGGTGCAGCGCCAAGATCCTCAAGCAAGCCATGGAAGTCAAGTCCAC  Raphanus sativus cv Early Scarlet Globe
FD570378       <-- AGATGGTGCAGCGCCAAGATC-TCAAGCAAGCCATGGAAGTCAAGTCCAC  Raphanus sativus cv Early Scarlet Globe
FY447505       <-- AGATGGTGCAGCGCCAAGATCCTCAAGCAAGCCTTGGAAGTCAAGTCCAC  Raphanus sativus cv GSK3-1
EV541679       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX758646       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX901946       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD945697       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV546554       --> AGATGGTGCAGCGCCAAGATCCTCAAGCAAGCCTTGGAAG..........  Raphanus raphanistrum subsp. raphanistrum (NY)
EX901433       --> AGATGGTGCAGCGCCAAGATCCTCAAGCAAGCCATGGAAGTCAAGTCCAC  Raphanus sativus cv Early Scarlet Globe
FD574395       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD944504       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FY437549       --> AGATGGTGCAGCGCCAAGATCCTCAAGCAAGCCTTGGAAGTCAAGTCCAC  Raphanus sativus cv GSK3-1
FD574054       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FY443698       --> AGATGGTGCAGCGCCAAGATCCTCAAGCAAGCCTTGGAAGTAAAGTCCAC  Raphanus sativus cv GSK3-1
FD936493       --> AGATGGTGCAGCGCCAAGATCCTCAAGCAAGCCTTGGAAGTCAAGTCCAC  Raphanus sativus var. oleiformis
FY444536       --> ..................................................  Raphanus sativus cv GSK3-1

               951    -   1001
UN18064        --> GGGTTGCAGGATCATAGTAACGGTAGTACTCAACAGACAAGCCAGCAAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX754288       <-- ..................................................
FD940670       <-- GGGTTGCAGGATCATAGTAACGGTAGTACTCAACAGACAAGCCAGCAAGG
FY452894       <-- GGGTTGCAGGATCATAGTAACGGTAGTACTCAACAGACAAGCCAGCAAGG
FY446143       <-- GGGTTGCAGGATCATAGTAACGGTAGTACTCAACAGACAAGCCAGCAAGG
FY442362       <-- GGGTTGCAGGATCATAGTAACGGTAGTACTCAACAGACAAGCCAGCAAGG
FY448627       <-- GGGTTGCAGGATCATAGTAACGGTAGTACTCAACAGACAAGCCAGCAAGG
FY437785       <-- GGGTTGCAGGATCATAGTAACGGTAGTACTCAACAGACAAGCCAGCAAGG
FY443308       <-- GGGTTGCAGGATCATAGTAACGGTAGTACTCAACAGACAAGCCAGCAAGG
FY453118       <-- GGGTTGCAGGATCATAGTAACGGTAGTACTCAACAGACAAGCCAGCAAGG
EV551461       <-- GGGTTGCAGGATCATAGTAACGGTAGTACTCAACAGACAAGCCAGCAAGG
FD569955       <-- GGGTTGCAGGATCATAGTAACGGTAGTACTCAACAGACAAGCCAGCAAGG
EX902158       <-- GGGTTGCAGGATCATAGTAACGGTAGTACTCAACAAACAAGCCAGCAAGG
FD571674       <-- GGGTTGCAGGATCATAGTAACGGTAGTACTCAACAGGCAAGCCAGCAAGG
FD570378       <-- GGGTTGCAGGATCATAGTAACGGTAGTACTCAACAGACAAGCCAGCAAGG
FY447505       <-- GGGTTGCAGGATCATAGTAACGGTAGTACTCAACAGACAAGCCAGCAAGG
EV541679       --> ..................................................
EX758646       --> ..................................................
EX901946       --> ..................................................
FD945697       --> ..................................................
EV546554       --> ..................................................
EX901433       --> GGGTT.............................................
FD574395       --> ..................................................
FD944504       --> ..................................................
FY437549       --> GGGTTGCAGGATCATAGTAACGGTAGTACTCAACAGACAAGCCAGCAAGG
FD574054       --> ..................................................
FY443698       --> GGGTTGCAGGATCATAGTAACGGTAGTACTCAACAGACAAGCCAGCAAGG
FD936493       --> GGGTTGCAGGATCATAGTAACGGTAGTACTCAACAGACAAGCCAGCAAGG
FY444536       --> ..................................................

               1001   -   1051
UN18064        --> TTGAAAACTTTGGGATGGTTCCCCCAAGTTGGTTTTGGAATGAAAATGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX754288       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD940670       <-- TTGAAAACTTTGGGATGGTTCCCCCAAGTTGGTTTTGGAATGAAAATGAC  Raphanus sativus var. oleiformis
FY452894       <-- TTGAAAACTTTGGGATGGTTCCCCCAAGTTGGTTTTGGAATGAAAATGAC  Raphanus sativus cv GSK3-1
FY446143       <-- TTGAAAACTTTGGGATGGTTCCCCCAAGTTGGTTTTGGAATGAAAATGAC  Raphanus sativus cv GSK3-1
FY442362       <-- TTGAAAACTTTGGGATGGTTCCCCCAAGTTGGTTTTGGAATGAAAATGAC  Raphanus sativus cv GSK3-1
FY448627       <-- TTGAAAACTTTGGGATGGTTCCCCCAAGTTGGTTTTGGAATGAAAATGAC  Raphanus sativus cv GSK3-1
FY437785       <-- TTGAAAACTTTGGGATGGTTCCCCCAAGTTGGTTTTGGAATGAAAATGAC  Raphanus sativus cv GSK3-1
FY443308       <-- TTGAAAACTTTGGGATGGTTCCCCCAAGTTGGTTTTGGAATGAAAATGAC  Raphanus sativus cv GSK3-1
FY453118       <-- TTGAAAACTTTGGGATGGTTCCCCCAAGTTGGTTTTGGAATGAAAATGAC  Raphanus sativus cv GSK3-1
EV551461       <-- TTGAAAACTTTGGG-TGGTTCCCCCAAGTTGGTTTTGGAATGAAAATGAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD569955       <-- TTGAAAACTTTGGGATGGTTCCCCCAAGTTGGTTTCGGAATGAAAATGAC  Raphanus sativus cv Early Scarlet Globe
EX902158       <-- TTGAAAACTTTGGGATGGTTCCCCCAAGTTGGTTTCGGAATGAAAATGAC  Raphanus sativus cv Rat-Tail Radish #3870
FD571674       <-- TTGAAAACTTTGGGATGGTTCCCCCAAGTTGGTTTCGGAATGAAAATGAC  Raphanus sativus cv Early Scarlet Globe
FD570378       <-- TTGAAAACTTTGGGATGGTTCCCCCAAGTTGGTTTCGGAATGAAAATGAC  Raphanus sativus cv Early Scarlet Globe
FY447505       <-- TTGAAAACTTTGGGATGGTTCCCCCAAGTTGGTTTTGGAATGAAAATGAC  Raphanus sativus cv GSK3-1
EV541679       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX758646       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX901946       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD945697       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV546554       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX901433       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD574395       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD944504       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FY437549       --> TTGAAAACTTTGGGATGGTTCCCC..........................  Raphanus sativus cv GSK3-1
FD574054       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FY443698       --> TTGAAAACTTTGGGATGGTTCCCCCAAGTTGGTTTTGGAATGAAAATGAC  Raphanus sativus cv GSK3-1
FD936493       --> TTGAAAACTTTGGGATGGTTCCCCCAAGTTGGTTTTGGAATGAAAATGAC  Raphanus sativus var. oleiformis
FY444536       --> ..................................................  Raphanus sativus cv GSK3-1

               1051   -   1101
UN18064        --> ACTCTGGTGGTAGTGTTTTTTGAGGAACTCAGCACCAACTCTCAAAGAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX754288       <-- ..................................................
FD940670       <-- ACTCTGGTGGTAGTGTTTTTTGAGGAACTCAGCACCAACTCTCAAAGAAC
FY452894       <-- ACTCTGGTGGTAGTGTTTTTTGAGGAACTCAGCACCAACTCTCAAAGAAC
FY446143       <-- ACTCTGGTGGTAGTGTTTTTTGAGGAACTCAGCACCAACTCTCAAAGAAC
FY442362       <-- ACTCTGGTGGTAGTGTTTTTTGAGGAACTCAGCACCAACTCTCAAAGAAC
FY448627       <-- ACTCTGGTGGTAGTGTTTTTTGAGGAACTCAGCACCAACTCTCAAAGAAC
FY437785       <-- ACTCTGGTGGTAGTGTTTTTTGAGGAACTCAGCACCAACTCTCAAAGAAC
FY443308       <-- ACTCTGGTGGTAGTGTTTTTTGAGGAACTCAGCACCAACTCTCAAAGAAC
FY453118       <-- ACTCTGGTGGTAGTGTTTTTTGAGGAACTCAGCACCAACTCTCAAAGAAC
EV551461       <-- ACTCTGGTGGTAGTGTTTTTTGAGGAACTCAGCACCAACTCTCAAAGAAC
FD569955       <-- ACTCTGGTGGTAGTGTTTTTTGAGAAACTCAGCACCAACTCTCAAAGAAC
EX902158       <-- ACTCTGGTGGTAGTGTTTTTTGAGGAACTCAGCACCAACTCTCAAAGAAC
FD571674       <-- ACTCTGGTGGTAGTGTTTTTTGAGAAACTCAGCACCAACTCTCAAAGAAC
FD570378       <-- ACTCTGGTGGTAGTGTTTTTTGAGAAACTCAGCACCAACTCTCAAAGAAC
FY447505       <-- ACTCTGGTGGTAGTGTTTTTTGAGGAACTCAGCACCAACTCTCAAAGAAC
EV541679       --> ..................................................
EX758646       --> ..................................................
EX901946       --> ..................................................
FD945697       --> ..................................................
EV546554       --> ..................................................
EX901433       --> ..................................................
FD574395       --> ..................................................
FD944504       --> ..................................................
FY437549       --> ..................................................
FD574054       --> ..................................................
FY443698       --> ACT...............................................
FD936493       --> ..................................................
FY444536       --> ..................................................

               1101   -   1151
UN18064        --> CAGTACCAGACAAGCACTGGATTGTAGCAACTCTACTCTCTTGAATTGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX754288       <-- ..................................................
FD940670       <-- CAGTACCAGACAAGCACTGGATTGTAGCAACTCTc...............
FY452894       <-- CAGTACCAGACAAGCACTGGATTGTAGCAACTCTACTCTCTTGAATTGCA
FY446143       <-- CAGTACCAGACAAGCACTGGATTGTAGCAACTCTACTCTCTTGAATTGCA
FY442362       <-- CAGTACCAGACAAGCACTGGATTGTAGCAACTCTACTCTCTTGAATTGCA
FY448627       <-- CAGTACCAGACAAGCACTGGATTGTAGCAACTCTACTCTCTTGAATTGCA
FY437785       <-- CAGTACCAGACAAGCACTGGATTGTAGCAACTCTACTCTCTTGAATTGCA
FY443308       <-- CAGTACCAGACAAGCACTGGATTGTAGCAACTCTACTCTCTTGAATTGCA
FY453118       <-- CAGTACCAGACAAGCACTGGATTGTAGCAACTCTACTCTCTTGAATTGCA
EV551461       <-- CAGTACCAGACAAGCACTGGATTGTAGCAACTCTACTCTCTTGAATTGCA
FD569955       <-- CAGTACCAGACAAGCACTGGATTGTAGCAACTCTACTCTCTTGAATTGCA
EX902158       <-- CAGTACCAGACAAGCACTGGATTGTAGCAACTCTACTCTCTTGAATTGCA
FD571674       <-- CAGTACCAGACAAGCACTGGATTGTAGCAACTCTACTCTCTTGAATTGCA
FD570378       <-- CAGTACCAGACAAGCACTGGATTGTAGCAACTCTACTCTCTTGAATTGCA
FY447505       <-- CAGTACCAGACAAGCACTGGATTGTAGCAACTCTACTCTCTTGAATTGCA
EV541679       --> ..................................................
EX758646       --> ..................................................
EX901946       --> ..................................................
FD945697       --> ..................................................
EV546554       --> ..................................................
EX901433       --> ..................................................
FD574395       --> ..................................................
FD944504       --> ..................................................
FY437549       --> ..................................................
FD574054       --> ..................................................
FY443698       --> ..................................................
FD936493       --> ..................................................
FY444536       --> ..................................................

               1151   -   1201
UN18064        --> GGACTATCAGCACCTAAGATGAGCTTGGCGCTGAGTTTGTTAAAATCAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX754288       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD940670       <-- ..................................................  Raphanus sativus var. oleiformis
FY452894       <-- GGACTATCAGCACCTAAGATGAGCTTGGCGCTGAGTTTGTTAAAATCAGC  Raphanus sativus cv GSK3-1
FY446143       <-- GGACTATCAGCACCTAAGATGAGCTTGGCGCTGAGTTTGTTAAAATCAGC  Raphanus sativus cv GSK3-1
FY442362       <-- GGACTATCAGCACCTAAGATGAGCTTGGCGCTGAGTTTGTTAAAATCAGC  Raphanus sativus cv GSK3-1
FY448627       <-- GGACTATCAGCACCTAAGATGAGCTTGGCGCTGAGTTTGTTAAAATCAGC  Raphanus sativus cv GSK3-1
FY437785       <-- GGACTATCAGCACCTAAGATGAGCTTGGCGCTGAGTTTGTTAAAATCAGC  Raphanus sativus cv GSK3-1
FY443308       <-- GGACTATCAGCACCTAAGATGAGCTTGGCGCTGAGTTTGTTAAAATCAGC  Raphanus sativus cv GSK3-1
FY453118       <-- GGACTATCAGCACCTAAGATGAGCTTGGCGCTGAGTTTGTTAAAATCAGC  Raphanus sativus cv GSK3-1
EV551461       <-- GGACTATCAGCACCTAAGATGAGCTTGGCGCTGAGTTTGTTAAAATCAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD569955       <-- GGACTATCAGCACCTAAGATGAGCTTGGCGCTAAGTTTGTTAAAATCAGC  Raphanus sativus cv Early Scarlet Globe
EX902158       <-- GGACTATCAGCACCTAAGATGAGCTTGGCGCTAAGTTTGTTAAAATCAGC  Raphanus sativus cv Rat-Tail Radish #3870
FD571674       <-- GGACTATCAGCACCTAAGATGAGCTTGGCGCTAAGTTTGTTAAAATCAGC  Raphanus sativus cv Early Scarlet Globe
FD570378       <-- GGACTATCAGCACCTAAGATGAGCTTGGCGCTAAGTTTGTTAAAATCAGC  Raphanus sativus cv Early Scarlet Globe
FY447505       <-- GGACTATCAGCACCTAAGATGAGCTTGGCGCTGAGTTTGTTAAAATCAGC  Raphanus sativus cv GSK3-1
EV541679       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX758646       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX901946       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD945697       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV546554       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX901433       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD574395       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD944504       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FY437549       --> ..................................................  Raphanus sativus cv GSK3-1
FD574054       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FY443698       --> ..................................................  Raphanus sativus cv GSK3-1
FD936493       --> ..................................................  Raphanus sativus var. oleiformis
FY444536       --> ..................................................  Raphanus sativus cv GSK3-1

               1201   -   1251
UN18064        --> AAGTCCAGCAATAGGAATATACTCCTTGACACGAGACGGATCGTTGACAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX754288       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD940670       <-- ..................................................  Raphanus sativus var. oleiformis
FY452894       <-- AAGTCCAGCAATAGGAATATACTCCTTGACACGAGACGGATCGTTGACAA  Raphanus sativus cv GSK3-1
FY446143       <-- AAGTCCAGCAATAGGAATATACTCCTTGACACGAGACGGATCGTTGACAA  Raphanus sativus cv GSK3-1
FY442362       <-- AAGTCCAGCAATAGGAATATACTCCTTGACACGAGACGGATCGTTGACAA  Raphanus sativus cv GSK3-1
FY448627       <-- AAGTCCAGCAATAGGAATATACTCCTTGACACGAGACGGATCGTTGACAA  Raphanus sativus cv GSK3-1
FY437785       <-- AAGTCCAGCAATAGGAATATACTCCTTGACACGAGACGGATCGTTGACAA  Raphanus sativus cv GSK3-1
FY443308       <-- AAGTCCAGCAATAGGAATATACTCCTTGACACGAGACGGATCGTTGACAA  Raphanus sativus cv GSK3-1
FY453118       <-- AAGTCCAGCAATAGGAATATACTCCTTGACACGAGGCGGATCGTTGACAA  Raphanus sativus cv GSK3-1
EV551461       <-- AAGTCCAGCAATAGGAATATACTCCTTGACACGAGACGGATCGTTGACAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD569955       <-- AAGTCCAGCAATAGGAATATATTCCTTGACACGAGGCGGATCGTTGACAA  Raphanus sativus cv Early Scarlet Globe
EX902158       <-- AAGTCCAGCAATAGGAATATATTCCTTGACACGAGACGGATCGTTGACAA  Raphanus sativus cv Rat-Tail Radish #3870
FD571674       <-- AAGTCCAGCAATAGGAATATATTCCTTGACACGAGACGGATCGTTGACAA  Raphanus sativus cv Early Scarlet Globe
FD570378       <-- AAGTCCAGCAATAGGAATATATTCCTTGACACGAGACGGATCGTTGACAA  Raphanus sativus cv Early Scarlet Globe
FY447505       <-- AAGTCCAGCAATAGGAATATACTCCTTGACACGAGACGGATCGTTGACAA  Raphanus sativus cv GSK3-1
EV541679       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX758646       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX901946       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD945697       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV546554       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX901433       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD574395       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD944504       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FY437549       --> ..................................................  Raphanus sativus cv GSK3-1
FD574054       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FY443698       --> ..................................................  Raphanus sativus cv GSK3-1
FD936493       --> ..................................................  Raphanus sativus var. oleiformis
FY444536       --> ..................................................  Raphanus sativus cv GSK3-1

               1251   -   1301
UN18064        --> GCTGTTGCTCTGCCCTTCGCACCACGTCAAGAACAAGTGGCTTCCCTTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX754288       <-- ..................................................
FD940670       <-- ..................................................
FY452894       <-- GCTGTTGCTCTGCCCTTCGCACCACGTCAAGAACAAGTGGCTTCCCTTCC
FY446143       <-- GCTGTTGCTCTGCCCTTCGCACCACGTCAAGAACAAGTGGCTTCCCTTCC
FY442362       <-- GCTGTTGCTCTGCCCTTCGCACCACGTCAAGAACAAGTGGCTTCCCTTCC
FY448627       <-- GCTGTTGCTCTGCCCTTCGCACCACGTCAAGAACAAGTGG-TTCCCTTCC
FY437785       <-- GCTGTTGCTCTGCCCTTCGCACCACGTCAAGAACAAGTGGCTTCCCTTCC
FY443308       <-- GCTGTTGCTCTGCCCTTCGCACCACGTCAAGAACAAGTGGCTTCCCTTCC
FY453118       <-- GCTGTTGCTCTGCCCTTCGCACCACGTCAAGAACAAGTGGCTTCCCTTCC
EV551461       <-- GCTGTTGCTCTGCCCTTCGCACCACGTCAAGAACAAGTGGCTTCCCTTCC
FD569955       <-- GCTGTTGCTCTGCCCTTCGCACCACGTCAAGAACAAGTGGCTTCCCTTCC
EX902158       <-- GCTGTTGCTCTGCCCTTCGCACCACGTCAAGAACAAGTGGCTTCCCTTCC
FD571674       <-- GCTGTTGCTCTGCCCTTCGCACCACGTCAAGAACAAGTGGCTTCCCTTCC
FD570378       <-- GCTGTTGCTCTGCCCTTCGCACCACGTCAAGAACAAGTGGCTTCCCTTCC
FY447505       <-- GCTGTTGCTCTGCCCTTCGCACCACGTCAAGAACAAGTGGCTTCCCTTCC
EV541679       --> ..................................................
EX758646       --> ..................................................
EX901946       --> ..................................................
FD945697       --> ..................................................
EV546554       --> ..................................................
EX901433       --> ..................................................
FD574395       --> ..................................................
FD944504       --> ..................................................
FY437549       --> ..................................................
FD574054       --> ..................................................
FY443698       --> ..................................................
FD936493       --> ..................................................
FY444536       --> ..................................................

               1301   -   1351
UN18064        --> TCAGTACGATAGGCACCGACACCCAAATTGAGCTTAGCTGGGCTTGGATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX754288       <-- ..................................................
FD940670       <-- ..................................................
FY452894       <-- TCAGTACGATAGGCACCGACACCCAAATTGAGCTTAGCTGGGCTTGGATC
FY446143       <-- TCAGTACGATAGGCACCGACACCCAAATTGAGCTTAGCTGGGCTTGGATC
FY442362       <-- TCAGTACGATAGGCACCGACACCCAAATTGAGCTTAGCTGGGCTTGGATC
FY448627       <-- TCAGTACGATAGGCACCGACACCCA.........................
FY437785       <-- TCAGTACGATAGGCACCGACACCCAAATTGAGCTTAGCTGGGCTTGGATC
FY443308       <-- TCAGTACGATAGGCACCGACACCCAAATTGAGCTTAGCTGGGCTTGGATC
FY453118       <-- TCAGTACGATAGGCACCGACACCCAAATTGAGCTTAGCTGGGCTTGGATC
EV551461       <-- TCAGTACGATAGGCACCGACACCCAAATTGAGCTTAGCTGGGCTTGGATC
FD569955       <-- TCAGTACGATAGGCACCGACACCCAAATTGAGCTTAGCTGGGCTTGGATC
EX902158       <-- TCAGTACGATAGGCACCGACACCCAAATTGAGCTTAGCTGGGCTTGGATC
FD571674       <-- TCAGTACGATAGGCACCGACACCCAAATTGAGCTTAGCTGGGCTTGGATC
FD570378       <-- TCAGTACGATAGGCACCGACACCCAAATTGAGCTTAGCTGGGCTTGGATC
FY447505       <-- TCAGTACGATAGGCACCGACACCCAAATTGAGCTTAGCTGGGCTTGGATC
EV541679       --> ..................................................
EX758646       --> ..................................................
EX901946       --> ..................................................
FD945697       --> ..................................................
EV546554       --> ..................................................
EX901433       --> ..................................................
FD574395       --> ..................................................
FD944504       --> ..................................................
FY437549       --> ..................................................
FD574054       --> ..................................................
FY443698       --> ..................................................
FD936493       --> ..................................................
FY444536       --> ......................................TGGGCTTGGATC

               1351   -   1401
UN18064        --> ATTGTTGTAAGCAACAGTCACACCAAGAATAGGATCTTCGGGAGCACGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX754288       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD940670       <-- ..................................................  Raphanus sativus var. oleiformis
FY452894       <-- ATTGTTGTAAGCAACAGTCACACCAAGAATAGGATCTTCGGGAGCACGAA  Raphanus sativus cv GSK3-1
FY446143       <-- ATTGTTGTAAGCAACAGTCACACCAAGAATAGGATCTTCGGGAGCACGAA  Raphanus sativus cv GSK3-1
FY442362       <-- ATTGTTGTAAGCAACAGTCACACCAAGAATAGGATCTTCGGGAGCACGAA  Raphanus sativus cv GSK3-1
FY448627       <-- ..................................................  Raphanus sativus cv GSK3-1
FY437785       <-- ATTGTTGTAAGCAACAGTCACACCAAGAATAGGATCTTCGGGAGCACGAA  Raphanus sativus cv GSK3-1
FY443308       <-- ATTGTTGTAAGCAACAGTCACACCAAGAATAGGATCTTCGGGAGCACGAA  Raphanus sativus cv GSK3-1
FY453118       <-- ATTGTTGTAAGCAACAGTCACACCAAGAATAGGATCTTCGGGAGCACGAA  Raphanus sativus cv GSK3-1
EV551461       <-- ATTGTTGTAAGCAACAGTCACACCAAGAATAGGATCTTCGGGAGCACGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD569955       <-- ATTGTTGTAAGCAACAGTCACACCGAGAATAGGATCCTCGGGAGCACGAA  Raphanus sativus cv Early Scarlet Globe
EX902158       <-- ATTGTTGTAAGCAACAGTCACACCGAGAATAGGATCCTCGGGAGTACGAA  Raphanus sativus cv Rat-Tail Radish #3870
FD571674       <-- ATTGTTGTAAGCAACAGTCACACCGAGAATAGGATCCTCGGGAGCACGGA  Raphanus sativus cv Early Scarlet Globe
FD570378       <-- ATTGTTGTAAGCAACAGTCACACCGAGAATAGGATCCTCGGGAGCACGAA  Raphanus sativus cv Early Scarlet Globe
FY447505       <-- ATTGTTGTAAGCAACAGTCACACCAAGAATAGGATCTTCGGGAGCACGAA  Raphanus sativus cv GSK3-1
EV541679       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX758646       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX901946       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD945697       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV546554       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX901433       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD574395       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD944504       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FY437549       --> ..................................................  Raphanus sativus cv GSK3-1
FD574054       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FY443698       --> ..................................................  Raphanus sativus cv GSK3-1
FD936493       --> ..................................................  Raphanus sativus var. oleiformis
FY444536       --> ATTGTTGTAAGCAACAGTCACACCAAGAATAGGATCTTCGGGAGCACGAA  Raphanus sativus cv GSK3-1

               1401   -   1451
UN18064        --> CGACGTTTGAGAAGACGGACTCCATTACAGCAAGGGGAGTTGAAGAGGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX754288       <-- ..................................................
FD940670       <-- ..................................................
FY452894       <-- CGACGTTTGAGAAGACGGACTCCATTACAGCAAGGGGAGT-GAAGAGGAG
FY446143       <-- CGACGTTTGAGAAGACGGACTCCATTACAGCAAGGGGAGT-GAAGAGGAG
FY442362       <-- CGACGTTTGAGAAGACGGACTCCATTACAGCAAGGGGAGTTGAAGAGGAG
FY448627       <-- ..................................................
FY437785       <-- CGACGTTTGAGAAGACGGACTCCATTACAGCAAGGGGAGTTGAAGAGGAG
FY443308       <-- CGACGTTTGAGAAGACGGACTCCATTACAGCAAGGGGAGTTGAAGAGGAG
FY453118       <-- CGACGTTTGAGAAGACGGACTCCATTACAGCAAGGGGAGTTGAAGAGGAG
EV551461       <-- CGACGTTTGAGAAGACGGACTCCATTACAGCAAGGGGAGTTGAAGAGGAG
FD569955       <-- CGACGTTTGAGAAGACGGACTCCATTACAGCAAGGGGAGTTGAAGAGGAG
EX902158       <-- CGACGTTTGAGAAGACGGACTCCAT.........................
FD571674       <-- CGACGTTTGAGAAGACGGACTCCATTACAGCAAGGGGAGTTGAAGAGGAG
FD570378       <-- CGACGTTTGAGAAGACGGACTCCATTACAGCAAGGGGAGTTGAAGAGGAG
FY447505       <-- CGACGTTTGAGAAGACGGACTCCATTACAGCAAGGGGAGTTGAAGAGGAG
EV541679       --> ..................................................
EX758646       --> ..................................................
EX901946       --> ..................................................
FD945697       --> ..................................................
EV546554       --> ..................................................
EX901433       --> ..................................................
FD574395       --> ..................................................
FD944504       --> ..................................................
FY437549       --> ..................................................
FD574054       --> ..................................................
FY443698       --> ..................................................
FD936493       --> ..................................................
FY444536       --> CGACGTTTGAGAAGACGGACTCCATTACAGCAAGGGGAGTTGAAGAGGAG

               1451   -   1501
UN18064        --> AGATCGGTGGGGGGAAGGTGAAATCAGTTGCGGAGAGTTTATTGGCGTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX754288       <-- ..................................................
FD940670       <-- ..................................................
FY452894       <-- AGATCGGTGGGGGGAAGG-GAAATCAGT-GCGGAGAGTTa..........
FY446143       <-- AGATCGGTGGGG......................................
FY442362       <-- AGATCGGTGGGGGGAAGGTGAAATCAGTTGCGGAGAGTTTATTGGCGTCG
FY448627       <-- ..................................................
FY437785       <-- AGATCGGTGGGGGGAAGGTGAAATCAGTTGCGGAGAGTTTATTGGCGTCG
FY443308       <-- AGATCGGTGGGGGGAAGGTGAAATCAGTTGCGGAGAGTTTATTGGCGTCG
FY453118       <-- AGATCGGTGGGGGGAAGGTGAAATCAGTTGCGGAGAGTTTATTGGCGTCG
EV551461       <-- AGATCGGTGGGGGGAAGGTGAAATCAGTTGCGGAGAGTTTATTGGCGTCG
FD569955       <-- AGATCGGTGGGGG-AAGGTGAAATCAGTTGCGGAGAGTTTATTGGCGTCG
EX902158       <-- ..................................................
FD571674       <-- AGATCGGTGGGGG-AAGGTGAAATCAGTTGCGGAGAGTTTATTGGCGTCG
FD570378       <-- AGATCGGTGGGGG-AAGGTGAAATCAGTTGCGGAGAGTTTATTGGCGTCG
FY447505       <-- AGATCGGTGGGGGGAAGGTGAAATCAGTTGCGGAGAGTTTATTGGCGTCG
EV541679       --> ..................................................
EX758646       --> ..................................................
EX901946       --> ..................................................
FD945697       --> ..................................................
EV546554       --> ..................................................
EX901433       --> ..................................................
FD574395       --> ..................................................
FD944504       --> ..................................................
FY437549       --> ..................................................
FD574054       --> ..................................................
FY443698       --> ..................................................
FD936493       --> ..................................................
FY444536       --> AGATCGGTGGGGGGAAGGTGAAATCAGTTGC...................

               1501   -   1551
UN18064        --> CCTTTTCTCTCACGAAGAAAACTTTTTAGTATATAAGACTGTGGTGGGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX754288       <-- ..................................................
FD940670       <-- ..................................................
FY452894       <-- ..................................................
FY446143       <-- ..................................................
FY442362       <-- CCTTT-CTCTCACGAAG.................................
FY448627       <-- ..................................................
FY437785       <-- CCTTTTCTCTCACGAAGAAAACTTTTTAGT....................
FY443308       <-- CCTTT-CTCTCACGAAG.................................
FY453118       <-- CCTTT-CTCTCA......................................
EV551461       <-- CCTTTTCTCTCACGAAGAAAACTTTTTAGTATATAACACTGTGGTGGGCT
FD569955       <-- CCTTTTCTCTCACGAAGAAAACTTTTTAGTATATcc..............
EX902158       <-- ..................................................
FD571674       <-- CCTcc.............................................
FD570378       <-- CCTTTTCTCTCACGAAGAAAACTTTTTAGTATATAAGACTGTGGTGGGCT
FY447505       <-- CCTTT-CTCTCACGAAGAAA..............................
EV541679       --> ..................................................
EX758646       --> ..................................................
EX901946       --> ..................................................
FD945697       --> ..................................................
EV546554       --> ..................................................
EX901433       --> ..................................................
FD574395       --> ..................................................
FD944504       --> ..................................................
FY437549       --> ..................................................
FD574054       --> ..................................................
FY443698       --> ..................................................
FD936493       --> ..................................................
FY444536       --> ..................................................

               1551   -   1601
UN18064        --> GTATAATGCGTTTTCTCAACTCTGTGGGCGCAGCAGCTTTTGAGACCAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX754288       <-- ..................................................
FD940670       <-- ..................................................
FY452894       <-- ..................................................
FY446143       <-- ..................................................
FY442362       <-- ..................................................
FY448627       <-- ..................................................
FY437785       <-- ..................................................
FY443308       <-- ..................................................
FY453118       <-- ..................................................
EV551461       <-- GTATAATGCcc.......................................
FD569955       <-- ..................................................
EX902158       <-- ..................................................
FD571674       <-- ..................................................
FD570378       <-- GTATAATGCGTTTTCTCAACTCTGTGGGCGCAGCAGCTTTTGAGACCAGA
FY447505       <-- ..................................................
EV541679       --> ..................................................
EX758646       --> ..................................................
EX901946       --> ..................................................
FD945697       --> ..................................................
EV546554       --> ..................................................
EX901433       --> ..................................................
FD574395       --> ..................................................
FD944504       --> ..................................................
FY437549       --> ..................................................
FD574054       --> ..................................................
FY443698       --> ..................................................
FD936493       --> ..................................................
FY444536       --> ..................................................

               1601   -   1651
UN18064        --> GAGAGAACTTGTTCCC
                   ~~~~~~~~~~~~~~~~
EX754288       <-- ................
FD940670       <-- ................
FY452894       <-- ................
FY446143       <-- ................
FY442362       <-- ................
FY448627       <-- ................
FY437785       <-- ................
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EV551461       <-- ................
FD569955       <-- ................
EX902158       <-- ................
FD571674       <-- ................
FD570378       <-- GAGAGAACTTGTTCCC
FY447505       <-- ................
EV541679       --> ................
EX758646       --> ................
EX901946       --> ................
FD945697       --> ................
EV546554       --> ................
EX901433       --> ................
FD574395       --> ................
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FY437549       --> ................
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FD936493       --> ................
FY444536       --> ................