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Alignment for radish unigene UN18167

               1      -     51
UN18167        --> GGGTAGTGGTGGTCAAGAACGTTATAAGAGTTTCAAGCGTAGTCTAACAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW722056       <-- ..................................................
FY436273       <-- ..................................................
EX760913       <-- ..................................................
EY895595       <-- ..................................................
FD968453       <-- ..................................................
FD539937       <-- ..................................................
EY899928       --> GGGTAGTGGTGGTCAAGAGCGTTATAAGAGTTTCAAGCGTAGTCT--CAA
FD544293       --> GGGTAGTGGTGGTCAAGAACGTTATAAGAGTTTCAAGCGTAGTCTAACAA
FD972576       --> GGGTAGTGGTGGTCAAGAACGTTATAAGAGTTTCAAGCGTAGTCTAACAA
EW718321       --> ..................................................
EX757288       --> ..................................................

               51     -    101
UN18167        --> GAAGATAAAGCAGCGATGGCCTCAAGCTCTGCGACTCTACTCAAAGCCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW722056       <-- ..................................................
FY436273       <-- ..................................................
EX760913       <-- ..................................................
EY895595       <-- ..................................................
FD968453       <-- ..................................................
FD539937       <-- ..................................................
EY899928       --> AAAGATAA-GCAGCAATGGCGTCAAGCACTGCGACTCTATTCAAAGCCTC
FD544293       --> GAAGATAAAGCAGCGATGGCCTCAAGCTCTGCGACTCTACTCAAAGCCTC
FD972576       --> GAAGATAAAGCAGCGATGGCCTCAAGCTCTGCGACTCTACTCAAAGCCTC
EW718321       --> ..................................................
EX757288       --> ..................................................

               101    -    151
UN18167        --> ACCGGTTAAATCTGACCGGCTCAAAGGACAGAGTCTCCTACCCCGTCAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW722056       <-- ..................................................
FY436273       <-- ..................................................
EX760913       <-- ..................................................
EY895595       <-- ..................................................
FD968453       <-- ..................................................
FD539937       <-- ..................................................
EY899928       --> ACCGGTGAAATCTGACTGGCTTAAAGGACAGAGTCTCCTACCCCGTCAAC
FD544293       --> ACCGGTTAAATCTGACCGGCTCAAAGGACAGAGTCTCCTACCCCGTCAAC
FD972576       --> ACCGGTTAAATCTGACCGGCTCAAAGGACAGAGTCTCCTACCCCGTCAAC
EW718321       --> ..................................................
EX757288       --> ..................................................

               151    -    201
UN18167        --> CTTCCTCCGTCTCTCCTTTCCGGAGCCACGTGGCACCTTCCGCTCTCACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW722056       <-- ..................................................
FY436273       <-- ..................................................
EX760913       <-- ..................................................
EY895595       <-- ..................................................
FD968453       <-- ..................................................
FD539937       <-- ..................................................
EY899928       --> CTTCCTCCGTCTCTCCTTTCCGGAGCCACGTGGCACCTTCCGCTCTCACC
FD544293       --> CTTCCTCCGTCTCTCCTTTCCGGAGCCACGTGGCACCTTCCGCTCTCACC
FD972576       --> CTTCCTCCGTCTCTCCTTTCCGGAGCCACGTGGCACCTTCCGCTCTCACC
EW718321       --> ..................................................
EX757288       --> ..................................................

               201    -    251
UN18167        --> GTCCATGCCGCCTCTGCCTACGCCGACGAGCTCGTCAAAACAGCTAAAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW722056       <-- ..................................................
FY436273       <-- ..................................................
EX760913       <-- ..................................................
EY895595       <-- ..................................................
FD968453       <-- ..................................................
FD539937       <-- ..................................................
EY899928       --> GTCCATGCCGCCTCTGCCTACGCCGACGAGCTCGTCAAAACAGCTAAAAC
FD544293       --> GTCCATGCCGCCTCTGCCTACGCCGACGAGCTCGTCAAAACAGCTAAAAC
FD972576       --> GTCCATGCCGCCTCTGCCTACGCCGACGAGCTCGTCAAAACAGCTAAAAC
EW718321       --> ..................................................
EX757288       --> ..................................................

               251    -    301
UN18167        --> AATCGCGTCTCCGGGACGCGGAATCTTGGCGATGGATGAGTCAAATGCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW722056       <-- ..................................................
FY436273       <-- ..................................................
EX760913       <-- ..................................................
EY895595       <-- ..................................................
FD968453       <-- ..................................................
FD539937       <-- ..................................................
EY899928       --> AATCGCGTCTCCGGGACGCGGAATCTTGGCGATGGATGAGTCAAACGCGA
FD544293       --> AATCGCGTCTCCGGGACGCGGAATCTTGGCGATGGATGAGTCAAATGCGA
FD972576       --> AATCGCGTCTCCGGGACGCGGAATCTTGGCGATGGATGAGTCAAATGCGA
EW718321       --> ..................................................
EX757288       --> ..................................................

               301    -    351
UN18167        --> CTTGCGGGAAGCGTTTGGCGTCGATTGGGCTAGAGAATACGGAGGCTAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW722056       <-- ..................................................
FY436273       <-- ..................................................
EX760913       <-- ..................................................
EY895595       <-- ..................................................
FD968453       <-- ..................................................
FD539937       <-- ..................................................
EY899928       --> CTTGCGGGAAGCGTTTGGCGTCGATTGGGCTAGAGAATACGGAGGCTAAC
FD544293       --> CTTGCGGGAAGCGTTTGGCGTCGATTGGGCTAGAGAATACGGAGGCTAAC
FD972576       --> CTTGCGGGAAGCGTTTGGCGTCGATTGGGCTAGAGAATACGGAGGCTAAC
EW718321       --> ..................................................
EX757288       --> ..................................................

               351    -    401
UN18167        --> CGTCAGGCTTACAGGACACTGCTTGTGTCGGCTCCAGGACTGGGACAGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW722056       <-- ..................................................
FY436273       <-- ..................................................
EX760913       <-- ..................................................
EY895595       <-- ..................................................
FD968453       <-- ..................................................
FD539937       <-- ..................................................
EY899928       --> CGTCAGGCTTACAGGACACTGCTTGTGTCGGCTCCAGGACTGGGACAGTA
FD544293       --> CGTCAGGCTTACAGGACACTGCTTGTGTCGGCTCCAGGACTGGGACAGTA
FD972576       --> CGTCAGGCTTACAGGACACTGCTTGTGTCGGCTCCAGGACTGGGACAGTA
EW718321       --> ..................................................
EX757288       --> ..................................................

               401    -    451
UN18167        --> CATCTCCGGAGCTATCCTGTTCGAGGAAACTCTCTACCAATCAACCGTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW722056       <-- ..................................................
FY436273       <-- ..................................................
EX760913       <-- ..................................................
EY895595       <-- ..................................................
FD968453       <-- ..................................................
FD539937       <-- ..................................................
EY899928       --> CATCTCCGGAGCTATCCTGTTCGAGGAAACTCTCTACCAATCCACCGTCG
FD544293       --> CATCTCCGGAGCTATCCTGTTCGAGGAAACTCTCTACCAATCAACCGTGG
FD972576       --> CATCTCCGGAGCTATCCTGTTCGAGGAAACTCTCTACCAATCAACCGTGG
EW718321       --> ..................................................
EX757288       --> ..................................................

               451    -    501
UN18167        --> ACGGCAAGAAAATGGTCGACGTTCTCGTCCAGCAGAACATCGTCCCTGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW722056       <-- ..................................................
FY436273       <-- ..................................................
EX760913       <-- ..................................................
EY895595       <-- ..................................................
FD968453       <-- ..................................................
FD539937       <-- ..................................................
EY899928       --> ACGGCAAGAAAATGGTCGACGTTCTCGTCCAGCAGAACATCGTCCCTGGC
FD544293       --> ACGGCAAGAAAATGGTCGACGTTCTCGTCCAGCAGAACATCGTCCCTGGC
FD972576       --> ACGGCAAGAAAATGGTCGACGTTCTCGTCCAGCAGAACATCGTCCCTGGC
EW718321       --> ..................................................
EX757288       --> ..................................................

               501    -    551
UN18167        --> ATCAAAGTCGACAAGGGTTTGGTGCCACTTGTTGGGTCTAACGACGAGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW722056       <-- ..................................................
FY436273       <-- ..................................................
EX760913       <-- ..................................................
EY895595       <-- ..................................................
FD968453       <-- ..................................................
FD539937       <-- ..................................................
EY899928       --> ATCAAAGTCGACAAGGGTTTGGTGCCACTTGTTGGGTCTAACGACGAGTC
FD544293       --> ATCAAAGTCGACAAGGGTTTGGTGCCACTTGTTGGGTCTAACGACGAGTC
FD972576       --> ATCAAAGTCGACAAGGGTTTGGTGCCACTTGTTGGGTCTAACGACGAGTC
EW718321       --> ..................................................
EX757288       --> ..................................................

               551    -    601
UN18167        --> ATGGTGCCAAGGACTTGACGGTTTAGCCTCTCGTACCGCTGCTTACTACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW722056       <-- ...........ccacgtggcacttccgCTCTCGTACCGCTGCTTACTACC
FY436273       <-- .................................TACCGCTGCTTACTATC
EX760913       <-- ..................................................
EY895595       <-- ..................................................
FD968453       <-- ..................................................
FD539937       <-- ..................................................
EY899928       --> ATGGTGCCAAGGACTTGATGGTTTAGCCTCTCGTACCGCTGCTTACTACC
FD544293       --> ATGGTGCCAAGGACTTGACGGTTTAGCCTCTCGTACCGCTGCTTACTACC
FD972576       --> ATGGTGCCAAGGACTTGACGGTTTAGCCTCTCGTACCGCTGCTTACTACC
EW718321       --> ..............................TCGTACCGCTGCTTACTACC
EX757288       --> ..................................................

               601    -    651
UN18167        --> AACAAGGTGCTCGTTTCGCCAAATGGCGTACTGTTGTGAGCATTCCAAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW722056       <-- AACAAGGTGCTCGTTTCGCCAAATGGCGTACTGTTGTGAGCATTCCAAAT
FY436273       <-- AACAAGGTGCTCGTTTCGCCAAATGGCGTACTGTTGTGAGCATTCCAAAT
EX760913       <-- .......TGCTCGTTTCGCCAAATGGCGTACTGTTGTGAGCATTCCAAAT
EY895595       <-- ..................................................
FD968453       <-- ..................................................
FD539937       <-- ..................................................
EY899928       --> AACA..............................................
FD544293       --> AACAAGGTGCTCGTTTCGCCAAATGGCGTACTGTTGTGAGCATTCCAAAT
FD972576       --> AACA-GGTGCTCGTTTCGCCAA-TGGCGTACTGTTGTGAGCATTCCAAAT
EW718321       --> AACAAGGTGCTCGTTTCGCCAAATGGCGTACTGTTGTGAGCATTCCAAAT
EX757288       --> ..gAAGGTGCTCGTTTCGCCAAATGGCGTACTGTTGTGAGCATTCCAAAT

               651    -    701
UN18167        --> GGACCATCTGCTTTGGCTGTTAAAGAAGCAGCCTGGGGACTTGCCCGCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW722056       <-- GGACCATCTGCTTTGGCTGTTAAAGAAGCAGCCTGGGGACTTGCCCGCTA
FY436273       <-- GGACCATCTGCTTTGGCTGTTAAAGAAGCAGCCTGGGGACTTGCCCGCTA
EX760913       <-- GGACCATCTGCTTTGGCTGTTAAAGAAGCAGCCTGGG-ACTTGCCCGCTA
EY895595       <-- ........TGCTTTGGCTGTTAAAGAAGCTGCCTGGGGACTTGCCCGCTA
FD968453       <-- ..................................................
FD539937       <-- ..................................................
EY899928       --> ..................................................
FD544293       --> GGCCCATCTGCTTTGGCTGTTAAAGAAGCAGCCTGGGGACTTGCCCGCTA
FD972576       --> GGACCATCTGCTTTGGCTGTTAAAGAAGCAGCCTGGGGACTTGCCCGCTA
EW718321       --> GGACCATCTGCTTTGGCTGTTAAAGAAGCAGCCTGGGGACTTGCCCGCTA
EX757288       --> GGACCATCTGCTTTGGCTGTTAAAGAAGCAGCCTGGG-ACTTGCCCGCTA

               701    -    751
UN18167        --> CGCCGCTATTTCTCAGGACAGCGGTCTGGTACCGATTGTGGAGCCGGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW722056       <-- CGCCGCTATTTCTCAGGACAGCGGTCTGGTACCGATTGTGGAGCCGGAGA
FY436273       <-- CGCCGCTATTTCTCAGGACAGCGGTCTGGTGCCGATTGTGGAGCCGGAGA
EX760913       <-- CGCCGCTATTTCTCAGGACAGCGGTCTGGTACCGATTGTGGAGCCGGAGA
EY895595       <-- CGCCGCTATTTCTCAGGACAGCGGTCTGGTACCGATTGTGGAGCCGGAGA
FD968453       <-- ..................................................
FD539937       <-- ..................................................
EY899928       --> ..................................................
FD544293       --> CGCCGCTATTTC......................................
FD972576       --> CGCg..............................................
EW718321       --> CGCCGCTATTTCTCAGGACAGCGGTCTGGTACCGATTGTGGAGCCGGAGA
EX757288       --> CGCCGCTATTTCTCAGGACAGCGGTCTGGTACCGATTGTGGAGCCGGAGA

               751    -    801
UN18167        --> TTATGTTGGACGGAGAACACTGCATTGACAGGACATATGAGGTTGCAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW722056       <-- TTATGTTGGACGGAGAACACTGCATTGACAGGACATATGAGGTTGCAGAG
FY436273       <-- TTATGTTGGACGGAGAACACTGCATTGACAGGACATATGAGGTTGCAGAG
EX760913       <-- TTATGTTGGACGGAGAACACTGCATTGACAGGACATATGAGGTTGCAGAG
EY895595       <-- TTATGTTGGACGGGGAACACTGCATTGACAGGACATATGAGGTTGCAGAG
FD968453       <-- ..................................................
FD539937       <-- ..................................................
EY899928       --> ..................................................
FD544293       --> ..................................................
FD972576       --> ..................................................
EW718321       --> TTATGTTGGACGGAGAACACTGCATTGACAGGACATATGAGGTTGCAGAG
EX757288       --> TTATGTTGGACGGAGAACACTGCATTGACAGGACATATGAGGTTGCAGAG

               801    -    851
UN18167        --> AAGGTCTGGTCTGAGGTCTTCTTCTATCTCGCTCAGAATAACGTCATGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW722056       <-- AAGGTCTGGTCTGAGGTCTTCTTCTATCTCGCTCAGAACAACGTCATGTT  Raphanus sativus var. oleiformis
FY436273       <-- AAGGTCTGGTCTGAGGTCTTCTTCTATCTCGCTCAGAACAACGTCATGTT  Raphanus sativus cv GSK3-1
EX760913       <-- AAGGTCTGGTCTGAGGTCTTCTTCTATCTCGCTCAGAATAACGTCATGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY895595       <-- AAGGTCTGGTCTGAGGTCTTCTTCTATCTCGCTCAGAACAACGTCATGTT  Raphanus raphanistrum subsp. maritimus
FD968453       <-- .............AGGTCTTCTTCTATCTCGCTCAGAATAACGTCATGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD539937       <-- ..............GGTCTTCTTCTATCTCGCTCAGAATAACGTCATGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY899928       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD544293       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD972576       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW718321       --> AAGGTCTGGTCTGAGGTCTTCTTCTATCTCGCTCAGAACAACGTCATGTT  Raphanus sativus var. oleiformis
EX757288       --> AAGGTCTGGTCTGAGGTCTTCTTCTATCTCGCTCAGAATAACGTCATGTT  Raphanus raphanistrum subsp. raphanistrum (MS)

               851    -    901
UN18167        --> CGAAGGTATCCTCCTGAAGCCGAGCATGGTTACTCCTGGTGCTGAGTCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW722056       <-- CGAAGGTATCCTCCTGAAGCCGAGCATGGTTACTCCTGGTGCTGAGTCCA
FY436273       <-- CGAAGGTATCCTCCTGAAGCCAAGCATGGTTACTCCTGGTGCTGAGTCCA
EX760913       <-- CGAAGGTATCCTCCTGAAGCCGAGCATGGTTACTCCTGGTGCTGAGTCCA
EY895595       <-- CGAAGGTATCCTCCTGAAGCCGAGCATGGTTACTCCAGGTGCTGAGTCCA
FD968453       <-- CGAAGGTATCCTCCTGAAGCCGAGCATGGTTACTCCTGGTGCTGAGTCCA
FD539937       <-- CGAAGGTATCCTCCTGAAGCCGAGCATGGTTACTCCTGGTGCTGAGTCCA
EY899928       --> ..................................................
FD544293       --> ..................................................
FD972576       --> ..................................................
EW718321       --> CGAAGGTATCCTCCTGAAGCCGAGCATGGTTACTCCTGGTGCTGAGTCCA
EX757288       --> CGAAGGTATCCTCCTGAAGCCGAGCATGGTTACTCCTGGTGCTGAGTCCA

               901    -    951
UN18167        --> AAGACAGAGCTACTCCCGAGCAAGTTGCTTCCTACACTCTCAAGCTTCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW722056       <-- AAGACAGAGCTACTCCCGAGCAAGTTGCTTCCTACACTCTCAAGCTTCTT
FY436273       <-- AAGACAGAGCTACTCCCGAGCAAGTTGCTTCCTACACTCTCAAGCTTCTT
EX760913       <-- AAGACAGAGCTACTCCCGAGCAAGTTGCTTCCTACACTCTCAAGCTTCTT
EY895595       <-- AAGACAGGGCTACTCCCGAGCAAGTTGCTTCCTACACTCTCAAGCTTCTT
FD968453       <-- AAGACAGAGCTACTCCCGAGCAAGTTGCTTCCTACACTCTCAAGCTTCTT
FD539937       <-- AAGACAGAGCTACTCCCGAGCAAGTTGCTTCCTACACTCTCAAGCTTCTT
EY899928       --> ..................................................
FD544293       --> ..................................................
FD972576       --> ..................................................
EW718321       --> AAGACAGAGCTACTCCCGAGCAAGTTGCTTCCTACACTCTCAAGCTTCTT
EX757288       --> AAGACAGAGCTACTCCCGAGCAAGTTGCTTCCTACACTCTCAAGCTTCTT

               951    -   1001
UN18167        --> TCCAACAGAGTTCCTCCCGCTGTACCCGGAATCATGTTCCTGTCTGGAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW722056       <-- TCCAACAGAGTTCCTCCCGCTGTACCCGGAATCATGTTCCTGTCTGGAGG
FY436273       <-- TCCAACAGAGTTCCTCCCGCTGTACCTGGAATCATGTTCCTGTCTGGAGG
EX760913       <-- TCCAACAGAGTTCCTCCCGCTGTACCCGGAATCATGTTCCTGTCTGGAGG
EY895595       <-- CGCAACAGAGTTCCTCCCGCTGTACCCGGAATCATGTTCCTGTCCGGAGG
FD968453       <-- TCCAACAGAGTTCCTCCCGCTGTACCCGGAATCATGTTCCTGTCTGGAGG
FD539937       <-- TCCAACAGAGTTCCTCCCGCTGTACCCGGAATCATGTTCCTGTCTGGAGG
EY899928       --> ..................................................
FD544293       --> ..................................................
FD972576       --> ..................................................
EW718321       --> TCCAACAGAGTTCCTCCCGCTGTACCCGGAATCATGTTCCTGTCTGGAGG
EX757288       --> TCCAACAGAGTTCCTCCCGCTGTACCCGGAATCATGTTCCTGTCTGGAGG

               1001   -   1051
UN18167        --> TCAGTCCGAGTTGGAGGCGACCTTGAACCTGAACGCAATGAACCAAGGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW722056       <-- TCAGTCCGAGTTGGAGGCGACCTTGAACCTGAACGCAATGAACCAAGGAC
FY436273       <-- ACAGTCCGAGTTGGAGGCGACCTTGAACCTGAACGCAATGAACCAAGGAC
EX760913       <-- TCAGTCCGAGTTGGAGGCGACCTTGAACCTGAACGCAATGAACCAAGGAC
EY895595       <-- ACAGTCCGAGTTGGAGGCGACCTTGAACCTGAACGCAATGAACCAAGGAC
FD968453       <-- TCAGTCCGAGTTGGAGGCGACCTTGAACCTGAACGCAATGAACCAAGGAC
FD539937       <-- TCAGTCCGAGTTGGAGGCGACCTTGAACCTGAACGCAATGAACCAAGGAC
EY899928       --> ..................................................
FD544293       --> ..................................................
FD972576       --> ..................................................
EW718321       --> TCAGTCCGAGTTGGAG-CGACCTTGAACCTGAACGCAATGAACCAAGGAC
EX757288       --> TCAGTCCGAGTTGGAGGCGACCTTGAACCTGAACGCAATGAACCAAGGAC

               1051   -   1101
UN18167        --> CGAACCCGTGGCACGTGTCCTTCTCCTATGCACGTGCCTTGCAGAACACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW722056       <-- CGAACCCATGGCACGTGTCCTTCTCCTATGCACGTGCCTTGCAGAACACT  Raphanus sativus var. oleiformis
FY436273       <-- CGAACCCATGGCACGTGTCCTTCTCCTATGCACGTGCCTTGCAGAACACT  Raphanus sativus cv GSK3-1
EX760913       <-- CGAACCCGTGGCACGTGTCCTTCTCCTATGCACGTGCCTTGCAGAACACT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY895595       <-- CGAACCCATGGCACGTGTCCTTCTCCTATGCACGTGCCTTGCAGAACACT  Raphanus raphanistrum subsp. maritimus
FD968453       <-- CGAACCCGTGGCACGTGTCCTTCTCCTATGCACGTGCCTTGCAGAACACT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD539937       <-- CGAACCCGTGGCACGTGTCCTTCTCCTATGCACGTGCCTTGCAGAACACT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY899928       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD544293       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD972576       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW718321       --> CGAACCCATGGCACGTGTCCTTCTC-TATGCACGTGCCTTGCAGA-CACT  Raphanus sativus var. oleiformis
EX757288       --> CGAACCCGTGGCACGTGTCCTTCTCCTATGCACGTGCCTTGCAGAACACT  Raphanus raphanistrum subsp. raphanistrum (MS)

               1101   -   1151
UN18167        --> TGCTTGAAGACATGGGGAGGCAGAGAAGAGAACGTGAAGGCGGCTCAGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW722056       <-- TGCTCGAAGACATGGGGAGGCAGAGAAGAGAACGTGAAGGCGGCTCAGGA
FY436273       <-- TGCTTGAAGACGTGGGGAGGCAGAGAAGAGAACGTGAAGGCGGCTCAGGA
EX760913       <-- TGCTTGAAGACATGGGGAGGCAGAGAAGAGAACGTGAAGGCGGCTCAGGA
EY895595       <-- TGCTTGAAGACATGGGGAGGCAGAGAAGAGAACGTGAAGGCGGCCCAGGA
FD968453       <-- TGCTTGAAGACATGGGGAGGCAGAGAAGAGAACGTGAAGGCGGCTCAGGA
FD539937       <-- TGCTTGAAGACATGGGGAGGCAGAGAAGAGAACGTGAAGGCGGCTCAGGA
EY899928       --> ..................................................
FD544293       --> ..................................................
FD972576       --> ..................................................
EW718321       --> TGCTc.............................................
EX757288       --> TGCTTGAAGACATGGGGAGGCAGAGAAGAGAACGTGAAGGCGGCTCAGGA

               1151   -   1201
UN18167        --> CACTCTCTTGACCCGAGCCAAAGCCAACTCGCTGGCTCAGCTAGGGAAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW722056       <-- CACTCTCTTGACCCGAGCCAAAGCCAACTCGCTGGCTCAG..........
FY436273       <-- CACTCTCTTGACCCGAGCCAAAGCCAACTCGCTGGCTCAGCTAGGGAAGT
EX760913       <-- CACTCTCTTGACCCGAGCCAAAGCCAACTCGCTGGCTCAGCTAGGGAAAT
EY895595       <-- CACTCTCTTGACCCGAGCCAAAGCCAACTCGCTGGCTCAGCTCGGGAAAC
FD968453       <-- CACTCTCTTGACCCGAGCCAAAGCCAACTCGCTGGCTCAGCTAGGGAAAT
FD539937       <-- CACTCTCTTGACCCGAGCCAAAGCCAACTCGCTGGCTCAGCTAGGGAAAT
EY899928       --> ..................................................
FD544293       --> ..................................................
FD972576       --> ..................................................
EW718321       --> ..................................................
EX757288       --> CACTCTCTTGACCCGAGCCAAAGCCAACTCGCTGGCTCAGCTAGGGAAAT

               1201   -   1251
UN18167        --> ACACAGGAGAAGGTGAGTCCGAGGATGCCAAGGAGGGTATGTTTGTAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW722056       <-- ..................................................
FY436273       <-- ATACAGGAGAAGGTGAGTCCGAGGATGCCAAGGAGGGTATGTTTGTAAAA
EX760913       <-- ACACAGGAGAAGGTGAGTCCGAGGATGCCAAGGAGGGTATGTTTGTAAAA
EY895595       <-- ACACAGGAGAAGGTGAGTCCGAGGATGCCAAGGAGGGTATGTTTGTAAAA
FD968453       <-- ACACAGGAGAAGGTGAGTCCGAGGATGCCAAGGAGGGTATGTTTGTAAAA
FD539937       <-- ACACAGGAGAAGGTGAGTCCGAGGATGCCAAGGAGGGTATGTTTGTAAAA
EY899928       --> ..................................................
FD544293       --> ..................................................
FD972576       --> ..................................................
EW718321       --> ..................................................
EX757288       --> ACACAGGAGAAGGTGAGTCCGAGGATGCCAAGGAGGGTATGTTTGTAAAA

               1251   -   1301
UN18167        --> GGCTACACCTATTAAGCTTATATGTATGAATGGTTCCGTTGACCAGAACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW722056       <-- ..................................................
FY436273       <-- GGCTACACCTATTAAGCTTATATGTATGAATGGTTCCGTTGACCAAAACT
EX760913       <-- GGCTACACCTATTAAGCTTATATGTATGAATGGTTCCGTTGACCAGAACT
EY895595       <-- GGCTACACCTATTAAGCTTATATGTATGAATGGTTCCGTTGACCAGAACT
FD968453       <-- GGCTACACCTATTAAGCTTATATGTATGAATGGTTCCGTTGACCAGAACT
FD539937       <-- GGCTACACCTATTAAGCTTATATGTATGAATGGTTCCGTTGACCAGAACT
EY899928       --> ..................................................
FD544293       --> ..................................................
FD972576       --> ..................................................
EW718321       --> ..................................................
EX757288       --> G-CTACACCTATTAAGCTTATATGTATGAATGGTTCCGTTGAC-AGAACT

               1301   -   1351
UN18167        --> CAAAACTTGAGCTTGATTTTGGTGTTTGAGTTATTATAATACTCTTCTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW722056       <-- ..................................................
FY436273       <-- CAAAACTTGAGCTTGATTTTGGTGTTTGAGTTATTATAATACTCTTCTTA
EX760913       <-- CAAAACTTGAGCTTGATTTTGGTGTTTGAGTTATTATAATACTCTTCTTA
EY895595       <-- CAAAACTTGAGCTTGATTTTGGTGTTTGAGTTATTATAATACTCTTCTTA
FD968453       <-- CAAAACTTGAGCTTGATTTTGGTGTTTGAGTTATTATAATACTCTTCTTA
FD539937       <-- CAAAACTTGAGCTTGATTTTGGTGTTTGAGTTATTATAATACTCTTCTTA
EY899928       --> ..................................................
FD544293       --> ..................................................
FD972576       --> ..................................................
EW718321       --> ..................................................
EX757288       --> CAAA-CTTGAGCTTGATTT-GGTGTTTGAGT-AT-ATA-TACTCTTCT-A

               1351   -   1401
UN18167        --> TGTGTGACTAGTTTTTGTTTCTTCATTATCGTTAATATGATCGTTTTGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW722056       <-- ..................................................
FY436273       <-- TGgcctc...........................................
EX760913       <-- TGTGTGACTAGTTTTTGTTTCTT...........................
EY895595       <-- TGTGTGACTAGTTTTTGTTTCTTCATTATCGTTAATATGATCGTTT....
FD968453       <-- TGTGTGACTAGTTTTTGTTTCTTCATTATCGTTAATATGATCGTTTTGCA
FD539937       <-- TGTGTGACTAGTTTTTGTTTCTTCATTATCGTTAATATGATCGTTTTGCA
EY899928       --> ..................................................
FD544293       --> ..................................................
FD972576       --> ..................................................
EW718321       --> ..................................................
EX757288       --> TGTGTGACTAGTTTTgttctaa............................

               1401   -   1451
UN18167        --> CCAACT
                   ~~~~~~
EW722056       <-- ......
FY436273       <-- ......
EX760913       <-- ......
EY895595       <-- ......
FD968453       <-- CC....
FD539937       <-- CCAACT
EY899928       --> ......
FD544293       --> ......
FD972576       --> ......
EW718321       --> ......
EX757288       --> ......