RadishBase

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Alignment for radish unigene UN18174

               1      -     51
UN18174        --> ATGGAAAATCATGCCTAGACTAGAAATTGCTCAACATATCCAACTAGAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570584       <-- ..................ACTAGAAATTGCTCAACATATCCAACTAGAAT
EY899372       <-- ..................................................
FD939039       <-- ..................................................
FD954319       <-- ..................................................
EY930953       <-- ..................................................
FD948341       <-- ..................................................
EY915577       <-- ..................................................
FY445514       --> ATGGAAAATCATGCCTAGACTAGAAATTGCTCAACATATCCAACTAGAAT
FD574557       --> ................cGACTAGAAATTGCTCAACATATCCAACTAAAAT
EY927023       --> .......................................aCAACTAGAAT
EV532066       --> .............................................AGAAT
FY443875       --> .............................................AGAAT
EY911395       --> ..................................................
FD950599       --> ..................................................
EY895160       --> ..................................................

               51     -    101
UN18174        --> CAGAAACATGTTGAACAAAAGAAAAAAGTATCGGAACATACAAAACGAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570584       <-- CAGAAACATGTTGAACAAAAGAAAAAAGTATCGGAACATACAAAACGAAT
EY899372       <-- ..................................................
FD939039       <-- ..................................................
FD954319       <-- ..................................................
EY930953       <-- ..................................................
FD948341       <-- ..................................................
EY915577       <-- ..................................................
FY445514       --> CAGAAACATGTTGAACAAAAGAAAAAAGTATCGGAACATACAAAACGAAT
FD574557       --> CAAAAACATGTTGAACAAAAGAAAAAAGTATCGGAACATACAAAACGAAT
EY927023       --> CAGAAACATGTTGAACAAAAGAAAAAAGTATCGGAACATACAAAACGAAT
EV532066       --> CAGAAACATGTTGAACAAAAGAAAAAAGTATCGGAACATACAAAACGAAT
FY443875       --> CAGAAACATGTTGAACAAAAGAAAAAAGTATCGGAACATACAAAACGAAT
EY911395       --> ............................TATCGGAACATACAAAACGAAT
FD950599       --> .......................................ACAAAACGAAT
EY895160       --> ..................................................

               101    -    151
UN18174        --> TTGTTTTTAAACGTACAATTTGTTACATTTCGAAAATGAGACACTGTTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570584       <-- TTGTTTTTAAACGTACAATTTGTTACATTTCGAAAATGAGACACTGTTGT
EY899372       <-- ..................................................
FD939039       <-- ..................................................
FD954319       <-- ..................................................
EY930953       <-- ..................................................
FD948341       <-- ..................................................
EY915577       <-- ..................................................
FY445514       --> TTGTTTTTAAACGTACAATTTGTTACATTTCGAAAATGAGACACTGTTGT
FD574557       --> TTGTTTTTAAACGTACAATTTGTTACATTTCGAAAATGAGACACTGTTGT
EY927023       --> TTGTTTTTAAACGTACAATTTGTTACATTTCGAAAATGAGACACTGTTGT
EV532066       --> TTGTTTTTAAACGTACAATTTGTTACATTTCGAAAATGAGACACTGTTGT
FY443875       --> TTGTTTTTAAACGTACAATTTGTTACATTTCGAAAATGAGACACTGTTGT
EY911395       --> TTGTTTTTAAACGTACAATTTGTTACATTTCGAAAATGAGACACTGTTGT
FD950599       --> TTGTTTTTAAACGTACAATTTGTTACATTTCGAAAATGAGACACTGTTGT
EY895160       --> ..................................................

               151    -    201
UN18174        --> AATGGAATGATATTTGCATCTATCATTCAGCGCCGAAAAGCATTGCCTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570584       <-- AATGGAATGATATTTGCATCTATCATTCAGCGCCGAAAAGCATTGCCTTC
EY899372       <-- ..................................................
FD939039       <-- ..................................................
FD954319       <-- ..................................................
EY930953       <-- ..................................................
FD948341       <-- ..................................................
EY915577       <-- ..................................................
FY445514       --> AATGGAATGATATTTGCATCTATCATTCAGCGCCGAAAAGCATTGCCTTC
FD574557       --> AATGGAATGATATTTGCATCTATCATTCAGCGCCGAAAAGCATTGCCTTC
EY927023       --> AATGGAATGATATTTGCATCTATCATTCAGCGCCGAAAAGCATTGCCTTC
EV532066       --> AATGGAATGATATTTGCATCTATCATTCAGCGCCGAAAAGCATTGCCTTC
FY443875       --> AATGGAATGATATTTGCATCTATCATTCAGCGCCGAAAAGCATTGCCTTC
EY911395       --> AATGGAATGATATTTGCATCTATCATTCAGCGCCGAAAAGCATTGCCTTC
FD950599       --> AATGGAATGATATTTGCATCTATCATTCAGCGCCGAAAAGCATTGCCTTC
EY895160       --> ..................................................

               201    -    251
UN18174        --> AGCTTCAGCTCCACGCTGTGAATAATAGCTTCTACGACGCACACTTTCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570584       <-- AGCTTCAGCTCCACGCTGTGAATAATAGCTTCTACGACGCACACTTTCTT
EY899372       <-- ..............................TCTACGGCGCACACTTTCTT
FD939039       <-- ..................................................
FD954319       <-- ..................................................
EY930953       <-- ..................................................
FD948341       <-- ..................................................
EY915577       <-- ..................................................
FY445514       --> AGCTTCAGCTCCACGCTGTGAATAATAGCTTCTACGACGCACACTTTCTT
FD574557       --> AGCTTCAGCTCCACGCTGTGAATAATAGCTTCTACGACGCACACTTTCTT
EY927023       --> AGCTTCAGCTCCACGCTGTGAATAATAGCTTCTACGACGCACACTTTCTT
EV532066       --> AGCTTCGGCTCCACGCTGTGAATAATAGCTTCTACGACGCACACTTTCTT
FY443875       --> AGCTTCAGCTCCACGCTGTGAATAATAGCTTCTACGACGCACACTTTCTT
EY911395       --> AGCTTCAGCTCCACGCTGTGAATAATAGCTTCTACGACGTACACTTTCTT
FD950599       --> AGCTTCAGCTCCACGCTGTGAATAATAGCTTCTACGACGCACACTTTCTT
EY895160       --> ................TGTGAATA-TAGCTTCTACGGCGCACACTTTCTT

               251    -    301
UN18174        --> CAATAGTGGAGCTTCCACCTTTCTCAACTCCATACACACTTTT-ATTAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570584       <-- CAATAGTGGAGCTTCCACCTTTCTCAACTCCATACACACTTTT-ATTAGC
EY899372       <-- CAATAGTGGAGCTTCCAC-TTTCTCAACTCCATACACACTTTT-ATTAGC
FD939039       <-- ..................................................
FD954319       <-- ..................................................
EY930953       <-- ..................................................
FD948341       <-- ..................................................
EY915577       <-- ..................................................
FY445514       --> CAATAGTGGAGCTTCCACCTTTCTCAACTCCATACACACTTTT-ATTAGC
FD574557       --> CAATAGTGGAGCTTCCACCTTTCTCAACTCCATACACACTTTT-ATTAGC
EY927023       --> CAATAGTGGAGCTTCCACCTTTCTCAACTCCATACACACTTTTTATTAGC
EV532066       --> CAATAGTGGAGCTTCCACCTTTCTCAACTCCATACACACTTTT-ATTAGC
FY443875       --> CAATAGTGGAGCTTCCACCTTTCTCAACTCCATACACACTTTT-ATTAGC
EY911395       --> CAATAGTGGAGCTTCCACCTTTCTCAACTCCATACACACTTTT-ATTAGC
FD950599       --> CAATAGTGGAGCTTCCACCTTTCTCAACTCCATACACACTTTT-ATTAGC
EY895160       --> CAATAGTGGAGCTTCCACCTTTCTCAACTCCATACACACTTTT-ATTAGC

               301    -    351
UN18174        --> GTCATCCAAAAAGCTTTTCCCTAACGAGTTTTTGTTCTTACTAGCTTCC-
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570584       <-- GTCATCCAAAAAGCTTTTCCCTAACGAGTTTTTGTTCTTACTAGCTTCC-
EY899372       <-- GGCATCCAAAAAGCTTTTCCCTAACGAGTTTTTGTTCTTACTAGCTTCC-
FD939039       <-- ............................TTTTTGTTCTTACTAGCTTCCC
FD954319       <-- ............................TTTTTGTTCTTACTAGCTTCC-
EY930953       <-- ..................................................
FD948341       <-- ..................................................
EY915577       <-- ..................................................
FY445514       --> GTCATCCAAAAAGCTTTTCCCTAACGAGTTTTTGTTCTTACTAGCTTCC-
FD574557       --> GTCATCCAAAAAGCTTTTCCCTAACAAGTTTTTGTTCTTACTAGCTTCC-
EY927023       --> GTCATCCAAAAAGCTTTTCCCTAACGAGTTTTTGTTCTTACTAGCTTCC-
EV532066       --> GTCATCCAAAAAGCTTTTCCCTAACGAGTTTTTGTTCTTACTAGCTTCC-
FY443875       --> GTCATCCAAAAAGCTTTTCCCTAACGAGTTTTTGTTCTTACTAGCTTCC-
EY911395       --> GTCATCCAAAAAGCTTTTCCCTAACGAGTTTTTGTTCTTACTAGCTTCC-
FD950599       --> GTCATCCAAAAAGCTTTTCCCTAACGAGTTTTTGTTCTTACTAGCTTCC-
EY895160       --> GGCATCCAAAAAGCTTTTCCCTAACGAGTTTTTGTTCTTACTAGCTTCC-

               351    -    401
UN18174        --> ACAGCATCAGTTTCATCAGCTTTCTTCAACCTACTCC-ATCTCTGCTCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570584       <-- ACAGCATCAGTTTCATCAGCTTTCTTCAACCTACTCC-ATCTCTGCTCCT  Raphanus sativus cv Early Scarlet Globe
EY899372       <-- ACTGCATCAGTTTCATCAGCTTTCTTCAACATACTCC-ATCTCTGCTCCT  Raphanus raphanistrum subsp. maritimus
FD939039       <-- ACAGCATCAGTTTCATCAGCTTTCTTCAAC-TACTCCCATCTCTGCTCCT  Raphanus sativus var. oleiformis
FD954319       <-- ACTGCATCAGTTTTATCAGCTTTCTTCAACCTACTCC-ATCTCTGCTCCT  Raphanus sativus cv Rat-Tail Radish #3870
EY930953       <-- ..................................................  Raphanus sativus var. oleiformis
FD948341       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY915577       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY445514       --> ACAGCATCAGTTTCATCAGCTTTCTTCAACCTACTCC-ATCTCTGCTCCT  Raphanus sativus cv GSK3-1
FD574557       --> ACAGCATCAGTTTCATCAGCTTTCTTCAACCTACTCC-ATCTCTGCTCCT  Raphanus sativus cv Early Scarlet Globe
EY927023       --> ACAGCATCAGTTTCATCAGCTTTCTTCGACCTACTCC-ATCTCTGCTCCT  Raphanus sativus var. oleiformis
EV532066       --> ACTGCATCAGTTTCATCAGCTTTCTTCAACCTACTCC-ATCTCTGCTCCT  Raphanus raphanistrum subsp. maritimus
FY443875       --> ACAGCATCAGTTTCATCAGCTTTCTTCAACCTACTCC-ATCTCTGCTCCT  Raphanus sativus cv GSK3-1
EY911395       --> ACAGCATCAGTTTCATCAGCTTTCTTCAACCTACTCC-ATCTCTGCTCCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD950599       --> ACTGCATCAGTTTTATCAGCTTTCTTCAACCTACTCC-ATCTCTGCTCCT  Raphanus sativus cv Rat-Tail Radish #3870
EY895160       --> ACTGCATCAGTTTCATCAGCTTTCTTCAACCTACTCC-ATCTCTGCTCCT  Raphanus raphanistrum subsp. maritimus

               401    -    451
UN18174        --> CATGCACCTCTGCGTCCATCTGCATTTGCTTAAATCTAGCAGCTCTCTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570584       <-- CATGAACCTCTGCGTCCATCTGCATTTGCTTAAATCTAGCAGCTCTCTCT  Raphanus sativus cv Early Scarlet Globe
EY899372       <-- CATGCACCTCTGCGTCCATCTGCATTTGCTTAAATCTAGCAGCTCTCTCT  Raphanus raphanistrum subsp. maritimus
FD939039       <-- CATGCACTTCTGCGTCCATCTGCATTTGCTTAAATCTAGCAGCTCTCTCT  Raphanus sativus var. oleiformis
FD954319       <-- CATGCACCTCTGCGTCCATCTGCATTTGCTTAAATCTAGCAGCTCTCTCT  Raphanus sativus cv Rat-Tail Radish #3870
EY930953       <-- ..................................................  Raphanus sativus var. oleiformis
FD948341       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY915577       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY445514       --> CATGCACTTCTGCGTCCATCTGCATTTGCTTAAATCTAGCAGCTCTCTCT  Raphanus sativus cv GSK3-1
FD574557       --> CATGAACCTCTGCGTCCATCTGCATTTGCTTAAATCTAGCAGCTCTCTCT  Raphanus sativus cv Early Scarlet Globe
EY927023       --> CATGCACTTCTGCGTCCATCTGCATTTGATTAAATCTAGCAGCTCTCTCT  Raphanus sativus var. oleiformis
EV532066       --> CATGCACCTCTGCGTCCATCTGCATTTGCTTAAATCTAGCAGCTCTCTCT  Raphanus raphanistrum subsp. maritimus
FY443875       --> CATGCACTTCTGCGTCCATCTGCATTTGCTTAAATCTAGCAGCTCTCTCT  Raphanus sativus cv GSK3-1
EY911395       --> CATGCACTTCTGCGTCCATCTGCATTTGCTTAAATCTAGCAGCTCTCTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD950599       --> CATGCACCTCTGCGTCCATCTGCATTTGCTTAAATCTAGCAGCTCTCTCT  Raphanus sativus cv Rat-Tail Radish #3870
EY895160       --> CATGCACCTCTGCGTCCATCTGCATTTGCTTAAATCTAGCAGCTCTCTCT  Raphanus raphanistrum subsp. maritimus

               451    -    501
UN18174        --> TCCTCTGATAATTTAGAGCCGCCACCCTTCCGGCGTCTATTCTGGAATCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570584       <-- TCCTCTGATAATTTAGAGCCGCCACCCTTCCGGCGTCTATTCTGGAATCC
EY899372       <-- TCCTCTGATAATTTAGAGCCGCCACCCTTCCGGCGTCTATTCTGGAATCC
FD939039       <-- TCCTCTGATAATTTAGAGCCGCCACCCTTCCGGCGTCTATTCTGGAATCC
FD954319       <-- TCCTCTGATAATTTAGAGCCGCCACCCTTCCGGCGTCTATTCTGGAATCC
EY930953       <-- ..................................................
FD948341       <-- ..................................................
EY915577       <-- ..................................................
FY445514       --> TCCTCTGATAATTTAGAGCCGCCACCCTTCCGGCGTCTATTCTGGAATCC
FD574557       --> TCCTCTGATAATTTAGAGCCGCCACCCTTCCGGCGTCTATTCTGGAATCC
EY927023       --> TCCTCTGATAATTTAGAGCCGCCACCCTTCCGGCGTCTATTCTGGAATCC
EV532066       --> TCCTCTGATAATTTAGAGCCGCCACCCTTCCGGCGTCTATTCTGGAATCC
FY443875       --> TCCTCTGATAATTTAGAGCCGCCACCCTTCCGGCGTCTATTCTGGAATCC
EY911395       --> TCCTCTGATAATTTAGAGCCGCCACCCTTCCGGCGTCTATTCTGGAATCC
FD950599       --> TCCTCTGATAATTTAGAGCCGCCACCCTTCCGGCGTCTATTCTGGAATCC
EY895160       --> TCCTCTGATAATTTAAAGCCCCCACCCTTCCGGCGTCTATTCTGGAATCC

               501    -    551
UN18174        --> ATTGTCCTCTCTCGAGGGGGGCTTGACATTGCTTAAGTCCTCTGTTTTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570584       <-- ATTGTCCTCTCTCGAGGGGGGCTTGACATTGCTTAAGTCCTCTGTTTTCC
EY899372       <-- ATTGTCCTCTCTCGAGGGGGGCTTGACATTGCTTAAGTCCTCTGTTTTCC
FD939039       <-- ATTGTCCTCTCTCGAGGGGGGCTTGACATTGCTTAAGTCCTCTGTTTTCC
FD954319       <-- ATTGTCCTCTCTCGAGGGGGGCTTGACATAGCTTAAGTCCTCTGTTTTCC
EY930953       <-- ..................................................
FD948341       <-- ..................................................
EY915577       <-- ..................................................
FY445514       --> ATTGTCCTCTCTCGAGGGGGGCTTGACATTGCTTAAGTCCTCTGTTTTCC
FD574557       --> ATTGTCCTCTCTCGAGGGGGGCTTGACATTGCTTAAGTCCTCTGTTTTCC
EY927023       --> ATTGTCCTCTCTCGAGGGGGGCTTGACATTGCTTAAGTCCTCTGTTTTCC
EV532066       --> ATTGTCCTCTCTCGAGGGGGGCTTGACATTGCTTAAGTCCTCTGTTTTCC
FY443875       --> ATTGTCCTCTCTCGAGGGGGGCTTGACATTGCTTAAGTCCTCTGTTTTCC
EY911395       --> ATTGTCCTCTCCCGAGGGGGGCTTGACATTACTTAAGTCCTCTGATTTCC
FD950599       --> ATTGTCCTCTCTCGAGGGGGGCTTGACATAGCTTAAGTCCTCTGTTTTCC
EY895160       --> ATTGTCCTCTCTCGAGGGGGGCTTGACATTGCTTAAGTCCTCTGTTTTCC

               551    -    601
UN18174        --> TTTTTCTGTCCTCTTGATCATAACTCCTGAGATTTTCCCTTTCCAAACGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570584       <-- TTTTTCTGTCCTCTTGATCATAACTCCTGAGATTTTCCCTTTCCAAACGG
EY899372       <-- TTTTTCTGTCCTCTTGATCATAACTCCTGAGATTTTCCCTTTCCAAACGG
FD939039       <-- TTTTTCTGTCCTCTTGATCATAACTCCTGAGATTTTCCCTTTCCAAACGG
FD954319       <-- TTTTTCTGTCCTCTTGATCATAACTCCTGAGATTTTCCCTTTCCAAACGG
EY930953       <-- ..................................................
FD948341       <-- ..................................................
EY915577       <-- ..................................................
FY445514       --> TTTTTCTGTCCTCTTGATCATAACTCCTGAGATTTTCCCTTTCCAAACGG
FD574557       --> TTTTTCTGTCCTCTTGATCATAACTCCTGAGATTTTCCCTTTCCAAACGG
EY927023       --> TTTTTCTGTCCTCTTGATCATAACTCCTGAGATTTTCCCTTTCCAAACGG
EV532066       --> TTTTTCTGTCCTCTTGATCATAACTCCTGAGATTTTCCCTTTCCAAACGG
FY443875       --> TTTTTCTGTCCTCTTGATCATAACTCCTGAGATTTTCCCTTTCCAAACGG
EY911395       --> TTTTTCTGTCCTCTTGATCATAACTCCTGAGATTTTCCCTTTCCAAACGG
FD950599       --> TTTTTCTGTCCTCTTGATCATAACTCCTGAGATTTTCCCTTTCCAAACGG
EY895160       --> TTTTTCTGTCCTCTTGATCATAACTCCTGAAATTTTCCCTTTCCAAAC..

               601    -    651
UN18174        --> CTGCCGCGGTAAGGAGAGTGGGTCCTATACTTCTCACTGGGTCGATCTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570584       <-- CTGCCGCGGTAAGGAGAGTGGGTCCTATACTTCTCACTGGGTCGATCTTC
EY899372       <-- CTGCCGCGGTAAGGAGAGTGGGTCCTATAATTCTCACTGGGTCGATCTTC
FD939039       <-- CTGCCGCGGTAAGGAGAGTGGGTCCTATACTTCTCACTGGGTCGATCTTC
FD954319       <-- CTGCCGCGGTAAGGAGAGTGGGTCCTATACTTCTCACTGGGTCGATCTTC
EY930953       <-- ..................................................
FD948341       <-- ..................................................
EY915577       <-- ..................................................
FY445514       --> CTGCCGCGGTAAGGAGAGTGGGTCCTATACTTCTCACTGGGTCGATCTTC
FD574557       --> CTGCCGCGGTAAGGAGAGTGGGTCCTATACTTCTCACTGGGTCGATCTTC
EY927023       --> CTGCCGCGGTAAGGAGAGTGGGTCCTATACTTCTCACTGGGTCGATCTTC
EV532066       --> CTGCCGCGGTAAGGAGAGTGGGTCCTATACTTCTCACTGGGTCGATCTTC
FY443875       --> CTGCCGCGGTAAGGAGAGTGGGTCCTATACTTCTCACTGGGTCGATCTTC
EY911395       --> CTGCCGCGGTAAGGAGAGTGGGTCCTATACTTCTCACTGGGTCGATCTTC
FD950599       --> CTGCCGCGGTAAGGAGAGTGGGTCCTATACTTCTCACTGGGTCGATCTTC
EY895160       --> ..................................................

               651    -    701
UN18174        --> TCTACGACTTTCTCTTCTTTTGGACTCATCATCCACCTCTGACCTCCGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570584       <-- TCTACGACTTTCTCTTCTTTTGGACTCATCATCCACCTCTGACCcc....  Raphanus sativus cv Early Scarlet Globe
EY899372       <-- TCTACGACTTTCTCTTCTTTTGGACACATCATCCACCTCTGACCTTCGCC  Raphanus raphanistrum subsp. maritimus
FD939039       <-- TCTACGACTCTCTCTTCTTTTGGACTCATCATCCACCTCTGACCTCCGTC  Raphanus sativus var. oleiformis
FD954319       <-- TCTACGGCTTTCTCTTCTTTTGGACTCATCATCCACCTCTGACCTCCGTC  Raphanus sativus cv Rat-Tail Radish #3870
EY930953       <-- ..................................................  Raphanus sativus var. oleiformis
FD948341       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY915577       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY445514       --> TCTACGACTCTCTCTTCTTTTGGACTCATCATCCACCTCTGACCTCCGTC  Raphanus sativus cv GSK3-1
FD574557       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY927023       --> TCTACGACTCTCTCTTCTTTTGGACTCATCATCCACCTCTGACCTCCGTC  Raphanus sativus var. oleiformis
EV532066       --> TCTACGACTTTCTCTTCTTTTGGACTCATCATCCACCTCTGACCTTCGCC  Raphanus raphanistrum subsp. maritimus
FY443875       --> TCTACGACTCTCTCTTCTTTTGGACTCATCATCCACCTCTGACCTCCGTC  Raphanus sativus cv GSK3-1
EY911395       --> TCTACGACTCTCTCTTCTTTTGGACTCATCATCCACCTCTGACCTCCGTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD950599       --> TCTACGGCTTTCTCTTCTTTTGGACTCATCATCCACCTCTGACCTCCGTC  Raphanus sativus cv Rat-Tail Radish #3870
EY895160       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               701    -    751
UN18174        --> TCTCATAGTGCTTATCTTGACTTTCTCTTCTTTTGGACTCATCATCCAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570584       <-- ..................................................
EY899372       <-- TCTCATAGTGCTTATCTTGACTTTCTCTTCTTTTGGACTCATCATCCAAC
FD939039       <-- TCTCATAGTGCTTATCTTGACTTTCTCTTCTTTTGGAATCATCATCCAAC
FD954319       <-- TCTCATAGTGCTTATCTTGACTTTCTCTTCTTTTGGACTCATCATCCAAC
EY930953       <-- ..................................................
FD948341       <-- ..................................................
EY915577       <-- ..................................................
FY445514       --> TCTCATAGTGCTTATCTTGACTTTCTCTTCTTTTGGACTCATCATCCAAC
FD574557       --> ..................................................
EY927023       --> TCTCATAGTGCTTATCTTGACTTTCTCTTCTTTTGGACTCATCATCCAAC
EV532066       --> TCTCATAGTGCTTATCTTGACTTTCTCTTCTTTTGGACTCATCATCCAAC
FY443875       --> TCTCATAGTGCTTATCTTGACTTTCTCTTCTTTTGGACTCATCATCCAAC
EY911395       --> TCTCATAGTGCTTATCTTGAC.............................
FD950599       --> TCTCATAGTGCTTATCTTGACTTTCTCTTCTTTTGGACTCATCATCCAAC
EY895160       --> ..................................................

               751    -    801
UN18174        --> TCTGACCTCCGTCTCTCGTAGTGCTTATCGTGACTTTCTCCTCTCCTTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570584       <-- ..................................................
EY899372       <-- TCCGACCTCCGTCTCTCGTAGTGCTTATCGTGACTTTCTCCTCTCCTTTT
FD939039       <-- TCTGACCTCCGTCTCTCGTAGTGCTTATCGTGACTTTCTCCTCTCCTTTT
FD954319       <-- TCTGACCTCCGTCTCTCGTAGTGCTTATCGTGACTTTCTCCTCTCCTTTT
EY930953       <-- ..................................................
FD948341       <-- ..................................................
EY915577       <-- ..................................................
FY445514       --> TCTGACCTCCGTCTCTCGTAGTGCTTATCGTGACTTT.............
FD574557       --> ..................................................
EY927023       --> TCTGACCTCCGTCTCTCGTAGTGCTTATCGTGACTTTCTCCTCTCCTTTT
EV532066       --> TCCGACCTCCGTCTCTCGTAGTGCTTATCGTGACTTTCTCCTCTCCTTTT
FY443875       --> TCTGACCTCCGTCTCTCGTAGTGCTTATCGTGACTTTCTCCTCTCCTTTT
EY911395       --> ..................................................
FD950599       --> TCTGACCTCCGTCTCTCGTAGTGCTTATCGTGACTTTCTCCTCTCCTTTT
EY895160       --> ..................................................

               801    -    851
UN18174        --> GGACTCATCCTCTAAGTCAGACCTTCGTCTTTCATAGTGCTTATCACGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570584       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY899372       <-- GGACTCATCCTCTAAGTCAGACCTTCGTCTTTCATAGTGCTTATCACGAC  Raphanus raphanistrum subsp. maritimus
FD939039       <-- GGACTCATCCTCTAAGTCAGACCTTCGTCTTTCGTAGTGCTTATCACGAC  Raphanus sativus var. oleiformis
FD954319       <-- GGACTCATCCTCTAAGTCAGACCTGCGTCTTTCATAGTGCTTATCACGAC  Raphanus sativus cv Rat-Tail Radish #3870
EY930953       <-- ..................................................  Raphanus sativus var. oleiformis
FD948341       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY915577       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY445514       --> ..................................................  Raphanus sativus cv GSK3-1
FD574557       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY927023       --> GGACTCATCCTCTAAGTCAGACCTTCGTCTTTCGTAGTGCTTATCACGAC  Raphanus sativus var. oleiformis
EV532066       --> GGACTCATCCTCTAAGTCAGACCTTCGTCTTTCATAGTGCTTATCACGAC  Raphanus raphanistrum subsp. maritimus
FY443875       --> GGACTCATCCTCTAAGTCAGACCTTCGTCTTTCGTAGTGCTTATCACGAC  Raphanus sativus cv GSK3-1
EY911395       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD950599       --> GGACTCATCCTCTAAGTCAGACCTGCGTCTTTCATAGTGCTTATCACGAC  Raphanus sativus cv Rat-Tail Radish #3870
EY895160       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               851    -    901
UN18174        --> TTTCCCTCTCGTAGAGTTTGTCATGATCCCCCGATGCTCTGTAATGACGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570584       <-- ..................................................
EY899372       <-- TTTCCCTCTCGTAGAGTTTGTCATGATCCCCCGATGCTCTGTAATGACGT
FD939039       <-- TTTCCCTCTCGTAGAGTTTGTCATGATCCCCCGATGCTCTGTAATGACGT
FD954319       <-- TTTCCCTCTCGTAGAGTTTGTCATGATCCCCCGATGCTCTGTAATGACGT
EY930953       <-- ..................................................
FD948341       <-- ..................................................
EY915577       <-- ..................................................
FY445514       --> ..................................................
FD574557       --> ..................................................
EY927023       --> TTTCCCTCTCGTAGAGTTTGTCATGATCCCC...................
EV532066       --> TTTCCCTCTCG.......................................
FY443875       --> TTTCCCTCTCGTAGAGTTTGTCATGATCCCCCGATGCTCTGT........
EY911395       --> ..................................................
FD950599       --> TT................................................
EY895160       --> ..................................................

               901    -    951
UN18174        --> GATTTTCTTCCAGTCTCTTCACCAGAATCTTCACCTGAATCAGAATGGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570584       <-- ..................................................
EY899372       <-- GATTTTCTTCCAGTCTCTTCAACAGAATCTTCACCTGAATCAGAATGGTG
FD939039       <-- GATTTTCTTCCAGTCTCTTCACCAGAATCTTCACCTGAATCAGAATGGTG
FD954319       <-- GATTTTCTTCCAGTCTCc................................
EY930953       <-- ...............ctcTCACCAGAATCTTCAC-TGAATCAGAATG-TG
FD948341       <-- .................................cgTGAATCAGAATGGTG
EY915577       <-- ..................................................
FY445514       --> ..................................................
FD574557       --> ..................................................
EY927023       --> ..................................................
EV532066       --> ..................................................
FY443875       --> ..................................................
EY911395       --> ..................................................
FD950599       --> ..................................................
EY895160       --> ..................................................

               951    -   1001
UN18174        --> TCTGGATTGCTTACGATGCTTACGCTTTTTCTTGTGCTCCTTTGCATCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570584       <-- ..................................................
EY899372       <-- TCTGGATTGCTTACGATGCTTACGCTTTTTCTTGTGCTCC..........
FD939039       <-- TCTGGATTGCTTACGATGCTTACGCTTTTTCTTGTGCTCCTTTGCATCTC
FD954319       <-- ..................................................
EY930953       <-- TCTGGATTGCTTACGATGCTTACGCTTTT-CTTGTGCTCCTTTGCATCTC
FD948341       <-- TCTTGATTGCTTACGATGCTTACGCTTTTTCTTGTGCTCCTTTGCATCCC
EY915577       <-- ..................................................
FY445514       --> ..................................................
FD574557       --> ..................................................
EY927023       --> ..................................................
EV532066       --> ..................................................
FY443875       --> ..................................................
EY911395       --> ..................................................
FD950599       --> ..................................................
EY895160       --> ..................................................

               1001   -   1051
UN18174        --> CATCTTTACCCTTTCCCTT-CTCCTCCACAGATTTGCGAATAAGAGCCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570584       <-- ..................................................
EY899372       <-- ..................................................
FD939039       <-- Ccc...............................................
FD954319       <-- ..................................................
EY930953       <-- CATCTTTACCCTTTCCCTT-CTCCTCCACAGATTTGCGAATAAGAGCCAT
FD948341       <-- CATCTTTACCCTTTCCCTT-CTCCTCCACAGATTTTCGAATAAGAGCCAT
EY915577       <-- ............TTCCCTTTCTCCTCCACAGATTTGCGAATAAGAGCCAT
FY445514       --> ..................................................
FD574557       --> ..................................................
EY927023       --> ..................................................
EV532066       --> ..................................................
FY443875       --> ..................................................
EY911395       --> ..................................................
FD950599       --> ..................................................
EY895160       --> ..................................................

               1051   -   1101
UN18174        --> CTTGACAGGGTTGTTCTTGATTCTGGCAAGAGCTTCTTGCTCGCGCTGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570584       <-- ..................................................
EY899372       <-- ..................................................
FD939039       <-- ..................................................
FD954319       <-- ..................................................
EY930953       <-- CTTGACAGGGTTGTTCTTGATTCTGGCAAGAGCTTCTTGCTCGCGCTGCC
FD948341       <-- CTTGACAGGGTTGTTCTTGATTCTGGCAAGAGCTTCTTGCTCGCGCTGCC
EY915577       <-- CTTGACAGGGTTGTTCTTGATTCTGGCAAGAGCTTCTTGCTCGCGCTGCC
FY445514       --> ..................................................
FD574557       --> ..................................................
EY927023       --> ..................................................
EV532066       --> ..................................................
FY443875       --> ..................................................
EY911395       --> ..................................................
FD950599       --> ..................................................
EY895160       --> ..................................................

               1101   -   1151
UN18174        --> TGATGAGAAGCAAAGGATCAGAGTGAAGCTTCCTCCAAGAATCATTAGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570584       <-- ..................................................
EY899372       <-- ..................................................
FD939039       <-- ..................................................
FD954319       <-- ..................................................
EY930953       <-- TGATGAGAAGCAAAGGATCAGAGTGAAGCTTCCTCCAAGAATCATTAGCA
FD948341       <-- TGATGAGAAGCAGAGGATCAGAGTGAAGCTTCCTCCAAGAATCATTAGCA
EY915577       <-- TGATGAGAAGCAAAGGATCAGAGTGAAGCTTCCTCCAAGAATCATTAGCA
FY445514       --> ..................................................
FD574557       --> ..................................................
EY927023       --> ..................................................
EV532066       --> ..................................................
FY443875       --> ..................................................
EY911395       --> ..................................................
FD950599       --> ..................................................
EY895160       --> ..................................................

               1151   -   1201
UN18174        --> GAGGGAGTCTTATCCTCAAACAGCGCACCAGGAGCCGAAGGATCTGGCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570584       <-- ..................................................
EY899372       <-- ..................................................
FD939039       <-- ..................................................
FD954319       <-- ..................................................
EY930953       <-- GAGGGAGTCTTATCCTCAAACAGCGCACCAGGAGCCGAAGGATCTGGCTT
FD948341       <-- GAGGGAGTCTTATCCTCAAACAGCGCACCAGGAGCCGAAGGATCTGGCTT
EY915577       <-- GAGGGAGTCTTATCCTCAAACAGCGCACCAGGAGCCGAAGGATCTGGCTT
FY445514       --> ..................................................
FD574557       --> ..................................................
EY927023       --> ..................................................
EV532066       --> ..................................................
FY443875       --> ..................................................
EY911395       --> ..................................................
FD950599       --> ..................................................
EY895160       --> ..................................................

               1201   -   1251
UN18174        --> CTCACTAGCATTATTACCAGCTTCAGCAGCATTGGCTAAAGGCTGCTCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570584       <-- ..................................................
EY899372       <-- ..................................................
FD939039       <-- ..................................................
FD954319       <-- ..................................................
EY930953       <-- CTCACTAGCATTATTACCAGCTTCAGCAGCATTGGCTAAAGGCTGCTCTT
FD948341       <-- CTCACTAGCATTATTACCAGCTTCAGCAGCATTGGCTAAAGGCTGCTCTT
EY915577       <-- CTCACTAGCATTATTACCAGCTTCAGCAGCATTGGCTAAAGGCTGCTCTT
FY445514       --> ..................................................
FD574557       --> ..................................................
EY927023       --> ..................................................
EV532066       --> ..................................................
FY443875       --> ..................................................
EY911395       --> ..................................................
FD950599       --> ..................................................
EY895160       --> ..................................................

               1251   -   1301
UN18174        --> CTCTCTGAAACGACACACCTGAACCACTCGCACTCCCTTTCCCTACAGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570584       <-- ..................................................
EY899372       <-- ..................................................
FD939039       <-- ..................................................
FD954319       <-- ..................................................
EY930953       <-- CTCTCTGAAACGACACACCTGAACCACTCGCACTCCCTTTACCTACAGCT
FD948341       <-- CTCTCTGAAACGACACACCTGAACCACTCGCACTCCCTTTCCCTACAGCT
EY915577       <-- CTCTCTGAAACGACACACCTGAACCACTCGCACTCCCTTTCCCTACAGCT
FY445514       --> ..................................................
FD574557       --> ..................................................
EY927023       --> ..................................................
EV532066       --> ..................................................
FY443875       --> ..................................................
EY911395       --> ..................................................
FD950599       --> ..................................................
EY895160       --> ..................................................

               1301   -   1351
UN18174        --> AATCCTGAATCATACAGAAACTCCAACCTCTCTTGTCTCGGGATGAGACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570584       <-- ..................................................
EY899372       <-- ..................................................
FD939039       <-- ..................................................
FD954319       <-- ..................................................
EY930953       <-- AATCCTGAATCATACAGAAACTCCAACCTCTCTTGTCTCGGGATGAGACC
FD948341       <-- AATCCTGAATCATACAGAAACTCCAACCTCTCTTGTCTCGGGATGAGACC
EY915577       <-- AATCCTGAATCATACAGAAACTCCAACCTCTCTTGTCTCGGGATGAGACC
FY445514       --> ..................................................
FD574557       --> ..................................................
EY927023       --> ..................................................
EV532066       --> ..................................................
FY443875       --> ..................................................
EY911395       --> ..................................................
FD950599       --> ..................................................
EY895160       --> ..................................................

               1351   -   1401
UN18174        --> GGCTTGTTCCTGAAGAGCGCGAAACTCAGAACGCTCCCTCTCCTGGACGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570584       <-- ..................................................
EY899372       <-- ..................................................
FD939039       <-- ..................................................
FD954319       <-- ..................................................
EY930953       <-- GGCTTGTTCCTGAAGAGCGCGAAACTCAGAACGCTCCCTCTCCTGGACGA
FD948341       <-- GGCTTGTTCCTGAAGAGCGCGAAACTCAGAACGCTCCCTCTCCTGGACGA
EY915577       <-- GGCTTGTTCCTGAAGAGCGCGAAACTCAGAACGCTCCCTCTCCTGGACGA
FY445514       --> ..................................................
FD574557       --> ..................................................
EY927023       --> ..................................................
EV532066       --> ..................................................
FY443875       --> ..................................................
EY911395       --> ..................................................
FD950599       --> ..................................................
EY895160       --> ..................................................

               1401   -   1451
UN18174        --> GCTGGAGACGAAGCTCCTCGAGCTTTTTCTGCTCGGCCTCTTGTTTCTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570584       <-- ..................................................
EY899372       <-- ..................................................
FD939039       <-- ..................................................
FD954319       <-- ..................................................
EY930953       <-- GCTGGAGACGAAGCTCCTCGAGCTTTTTCTGCTCGGCCTCTTGTTTCTGC
FD948341       <-- GCTGGAGACGAAGCTCCTCGAGCTTTTTCTGCTCGGCCTCTTGTTTCTGC
EY915577       <-- GCTGGAGACGAAGCTCCTCGAGCTTTTTCTGCTCGGCCTCTTGTTTCTGC
FY445514       --> ..................................................
FD574557       --> ..................................................
EY927023       --> ..................................................
EV532066       --> ..................................................
FY443875       --> ..................................................
EY911395       --> ..................................................
FD950599       --> ..................................................
EY895160       --> ..................................................

               1451   -   1501
UN18174        --> TCAGCCTTCCACACGTTCTCGATGTTACGGAGACTCCCCGTATGCCATCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570584       <-- ..................................................
EY899372       <-- ..................................................
FD939039       <-- ..................................................
FD954319       <-- ..................................................
EY930953       <-- TCAGCCTTCCACACGTTCTCGATGTTACGGAGACTCCCCGTATGCCATCC
FD948341       <-- TCAGCCTTCCACACGTTCTCGATGTTACGGAGACTCCCCGTATGCCATCC
EY915577       <-- TCAGCCTTCCACACGTTCTCGATGTTACGGAGACTCCCCGTATGCCATCC
FY445514       --> ..................................................
FD574557       --> ..................................................
EY927023       --> ..................................................
EV532066       --> ..................................................
FY443875       --> ..................................................
EY911395       --> ..................................................
FD950599       --> ..................................................
EY895160       --> ..................................................

               1501   -   1551
UN18174        --> CTTCTTGTTCAAAAATTTCATCCCCATGATTGCTGCTCCTCTCTTTCTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570584       <-- ..................................................
EY899372       <-- ..................................................
FD939039       <-- ..................................................
FD954319       <-- ..................................................
EY930953       <-- CTTCTTGTTCAAAAATTTCATCCCCATGATTGCTGCTCCTCTCTTTCTCT
FD948341       <-- CTTCTTGTTCAAAAATTTCATCCCCATGATTGCTGCTCCTCTCTTTCTCT
EY915577       <-- CTTCTTGTTCAAAAATTTCATCCCCATGATTGCTGCTCCTCTCTTTCTCT
FY445514       --> ..................................................
FD574557       --> ..................................................
EY927023       --> ..................................................
EV532066       --> ..................................................
FY443875       --> ..................................................
EY911395       --> ..................................................
FD950599       --> ..................................................
EY895160       --> ..................................................

               1551   -   1601
UN18174        --> ATCGCTTCGACAGATTTGTGTTGTCTTCACTTTTTTTTT--GTCTTTCGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570584       <-- ..................................................
EY899372       <-- ..................................................
FD939039       <-- ..................................................
FD954319       <-- ..................................................
EY930953       <-- ATCGCTTCGACAGATTTGTGTTGTCTTCACTTTTTTTTTTTGTCTTTCGT
FD948341       <-- ATCGCTTCGACAGATTTGTGTTGTCTTCACTTTcc...............
EY915577       <-- ATCGCTTCGACAGATTTGTGTTGTCTTCACTTTTTTTTT--GTCTTTCGT
FY445514       --> ..................................................
FD574557       --> ..................................................
EY927023       --> ..................................................
EV532066       --> ..................................................
FY443875       --> ..................................................
EY911395       --> ..................................................
FD950599       --> ..................................................
EY895160       --> ..................................................

               1601   -   1651
UN18174        --> TTCGAATTGAAATCTCGTGGTGGTTGATGTAATGATCTCTGATTTGCTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570584       <-- ..................................................
EY899372       <-- ..................................................
FD939039       <-- ..................................................
FD954319       <-- ..................................................
EY930953       <-- TTCGAATTGAAATCTCGTGGTGGTTGATGTAATGATCTCTGATTTGCTCC
FD948341       <-- ..................................................
EY915577       <-- TTCGAATTGAAATCTCGTGGTGGTTGATGTAATGATCTCTGATTTGCTCC
FY445514       --> ..................................................
FD574557       --> ..................................................
EY927023       --> ..................................................
EV532066       --> ..................................................
FY443875       --> ..................................................
EY911395       --> ..................................................
FD950599       --> ..................................................
EY895160       --> ..................................................

               1651   -   1701
UN18174        --> GCCTCCGCCGACTCAATGATGAAGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570584       <-- ..........................
EY899372       <-- ..........................
FD939039       <-- ..........................
FD954319       <-- ..........................
EY930953       <-- GCCTCCGCCGACTCAATGATGAAGCC
FD948341       <-- ..........................
EY915577       <-- GCCTCCGCCGACTCAA..........
FY445514       --> ..........................
FD574557       --> ..........................
EY927023       --> ..........................
EV532066       --> ..........................
FY443875       --> ..........................
EY911395       --> ..........................
FD950599       --> ..........................
EY895160       --> ..........................