1 - 51
UN18189 --> GGAGTACAAAGGGAGATAATGTGATGATGATGATGATGATGATGAATGAC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY449584 <-- ..................................................
FY454038 <-- ..................................................
FD535544 <-- ..................................................
EY913879 <-- ..................................................
FD531182 --> GGAGTACAAAGGGAGATAATGTGATGATGATGATGATGATGATGAATGAC
EY896640 --> ....................aatgTGATGATGATGATGATGATGAATGAC
51 - 101
UN18189 --> CACCATCCCACATAATATTATTACGAATGTTACAGGTTGAAGAAAAAAGA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY449584 <-- ..................................................
FY454038 <-- ..................................................
FD535544 <-- ..................................................
EY913879 <-- ..................................................
FD531182 --> CACCATCCCACATAATATTATTACGAATGTTACAGGTTGAAGAAAAAAGA
EY896640 --> CACCATCCCACATAATATTATTACGAATGTTACAGGTTGAAAAAAAAAGA
101 - 151
UN18189 --> AGGCAGTAATTAATCTAACATACAACAGAGAGATCAC-TTTCACTCATGA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY449584 <-- ..................................................
FY454038 <-- ..................................................
FD535544 <-- ..................................................
EY913879 <-- ..................................................
FD531182 --> AGGCAGTAATTAATCTAACATACAACAGAGAGATCAC-TTTCACTCATGA
EY896640 --> AGGCAGTAATTAATCTAACATACAACAGAAAGATCACCTTTCACTCATGA
151 - 201
UN18189 --> TTTATATCAAACCAGAAGTAGAGGTAAGCCTTCGAGTACATGACTCGAAC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY449584 <-- .............AGAAGTAGAGGTAAGCCTTCGAGTACATGACTCGAAC
FY454038 <-- .................................GAGTACATGACTCGAAC
FD535544 <-- ..................................................
EY913879 <-- ..................................................
FD531182 --> TTTACATCAAACCAGAAGTAGAGGTAAGCCTTCGAGTACATGACTCGAAC
EY896640 --> TCTATATCAAACCAAAAGTAGAGGTAAGCCTTCGAGTACATGACTCGAAC
201 - 251
UN18189 --> ACGCTGCAGTACCAAGTCTCCGCTTGTAGCAACAGCCTTTGCACCTCCTT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY449584 <-- ACGCTGCAGTACCAAGTCTCCGCTTGTAGCAACAGCCTTTGCACCTCCCT
FY454038 <-- ACGCTGCAGTACCAAGTCTCCGCTTGTAGCAACAGCCTTTGCACCTCCCT
FD535544 <-- ..................................................
EY913879 <-- ..................................................
FD531182 --> ACGCTGCAGTACCAAGTCTCCGCTTGTAGCAACAGCCTTTGCACCTCCTT
EY896640 --> CCGCTGCAGTACCAAGTCTCCGCTTGTAGCAACAGCCTTTGTACCTCCTT
251 - 301
UN18189 --> CTATCCTTGTCTGCAAAACAGTCACACTGTTTCCCTTAATCTTTTCAACA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY449584 <-- CTATCCTTGTCTGCAAAACAGTCACACTGTTTCCCTTAATCTTTTCAACA
FY454038 <-- CTATCCTTGTCTGCAAAACAGTCACACTGTTTCCCTTAATCTTTTCAACA
FD535544 <-- .......................................atcTTTCAACA
EY913879 <-- ..................................................
FD531182 --> CTATCCTTGTCTGCAAAACAGTCACACTGTTTCCCTTAATCTTTTCAACA
EY896640 --> CTATCCTTGTCTGCAAAACAGTCACACTGTTTCCCTTAATCTTTTCAACA
301 - 351
UN18189 --> ACGGTTTCCTTCACTTCCACATGCCTGCTCAAGTTATCTTCTTCTTCTCC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY449584 <-- ACGGTTTCCTTCACTTCCACATGCCTGCTCAAGTTATCTTCTTCTTCTCC
FY454038 <-- ACGGTTTCCTTCACTTCCACATGCCTGCTCAAGTTATCTTCTTCTTCTCC
FD535544 <-- ACGGTTTCCTTCACTTCCACATGTCTGCTCAAGTTATCTTCTTCTTCTCC
EY913879 <-- ............................................TTCTCC
FD531182 --> ACGGTTTCCTTCACTTCCACATGTCTGCTCAAGTTATCTTCTTCTTCTCC
EY896640 --> ACGGTTTCCTTCACTTCCACATGCCTGCTCAAGTTATCCTCTTCTTCTCC
351 - 401
UN18189 --> AGCAGTGCTCACGATTGGGCATGAGAGATGGTCCAAAGGGTTTGTTTCAC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY449584 <-- AGCAGTGCTCACGATTGGGCATGAGAGATGGTCCAAAGGGTTTGTTTCAC Raphanus sativus cv GSK3-1
FY454038 <-- AGCAGTGCTCACGATTGGGCATGAGAGATGGTCCAAAGGGTTTGTTTCAC Raphanus sativus cv GSK3-1
FD535544 <-- AGCAGTGCTCACGATTGGGCATGAGAGATGGTCCAAAGGGTTCGTTTCAC Raphanus raphanistrum subsp. maritimus
EY913879 <-- AGCAGTGCTCACGATTGGGCATGAGAGATGGTCCAAAGGGTTTGTTTCAC Raphanus raphanistrum subsp. raphanistrum (NY)
FD531182 --> AGCAGTGCTCACGATTGGGCATGAGAGATGGTCCAAAGGGTTCGTTTCAC Raphanus raphanistrum subsp. maritimus
EY896640 --> AGCAGTGCTCACGATTGGGCATGAAAGATGGTCCAAAGGGTTCGTTTCAC Raphanus raphanistrum subsp. maritimus
401 - 451
UN18189 --> ATTGAAGCACGCATCCATCAATCGTTATCCTTCCGCTCCTGTGAAGCAAG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY449584 <-- ATTGAAGCACGCATCCATCAATCGTTAGCCTTCCGCTCCTGTGAAGCAAG
FY454038 <-- ATTGAAGCACGCATCCATCAATCGTTAGCCTTCCGCTCCTGTGAAGCAAG
FD535544 <-- ATTGAAGCACGCATCCATCAATCGTTATCCTTCCACTCCTGTGAAGCAAG
EY913879 <-- ATTGAAGCACGCATCCATCAATCGTTATCCTTCCGCTCCTGTGAAGCAAG
FD531182 --> ATTGAAGCACGCATCCATCAATCGTTATCCTTCCACTCCTGTGAAGCAAG
EY896640 --> ATTGAAGCACACATCCATCGATCGTTAGCCTTCCGCTCCTGTGAAGCAAG
451 - 501
UN18189 --> CAGCAGCCAAGCTCGGCTTTTACTGTTAGATTCGCTAGCTTGCAGGTTGA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY449584 <-- CAGCAGCCAAGCTCGGCTTTTACTGTTAGATTCGCTAGCTTGCAGGTTGA
FY454038 <-- CAGCAGCCAAGCTCGGCTTTTACTGTTAGATTCGCTAGCTTGCAGGTTGA
FD535544 <-- CAGCAGCCAAGCTCGGCTTTTACTGTTAGATTCGCTAGCTTGCAGGTTGA
EY913879 <-- CAGCAGCCAAGCTCGGCTTTTACTGTTAGATTCGCTAGTTTGCAGGTTGA
FD531182 --> CAGCAGCCAAGCTCGGCTTTTACTGTTAGATTCGCTAGCTTGCAGGTTGA
EY896640 --> CAGCAGCCAAGCTCGGCCTTTACTGTTAGATTCGCTAGCTTGCAGGTTGA
501 - 551
UN18189 --> TAGCAACTCCAGGGCACTGTCTGATCCTCTAGAACATACAAGGGTGGTTT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY449584 <-- TAGCAACTCCAGGGCACTGTCTGATCCTCTAGAACATACAAGGGTGGTTT
FY454038 <-- TAGCAACTCCAGGGCACTGTCTGATCCTCTAGAACATACAAGGGTGGTTT
FD535544 <-- TAGCAACTCCAGGGCACTGTCTGATCCTCTAGAACATACAAGGGTGGTTT
EY913879 <-- TAGCAACTCCAGGGCACTGTCTGATCCTCTAGAACATACAAGGGTGGTTT
FD531182 --> TAGCAACTCCAGGGCACTGTCTGATCCTCTAGAACATACAAGGGTGGTTT
EY896640 --> TAGCAACTCCAGGGCACTGTCTGATCCTCTAGAACATACAAGGGTGGTTT
551 - 601
UN18189 --> CATCAGGAATCTCGCCACCACCAATCAGGCAAATAGGCTTTTTAATCTGA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY449584 <-- CATCAGGAATCTCGCCACCACCAATCAGGCAAATAGGCTTTTTAATCTGA
FY454038 <-- CATCAGGAATCTCGCCACCACCAATCAGGCAAATAGGCTTTTTAATCTGA
FD535544 <-- CATCAGGAATCTCGCCACCACCAATCAGGCAAATAGGCTTTTTAATCTGA
EY913879 <-- CATCAGGAATCTCGCCACCACCAATCAGGCAAATAGGCTTTTTAATCTGA
FD531182 --> CATCAGGAATCTCGCCACCACCAATCAGGCAAATAGGCTTTTTAATCTGA
EY896640 --> CATCAGGAATCTCGCCACCACCAATCAGGCAAATAGGCTTTTTAATCTGA
601 - 651
UN18189 --> ATATTAGAAACGCGATGACTTCCACCAGCACCTATTAAAATGGTATCACC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY449584 <-- ATATTAGAAACGCGATGACTTCCACCAGCACCTATTAAAATGGTATCACC
FY454038 <-- ATATTAGAAACGCGATGACTTCCACCAGCACCTATTAAAATGGTATCACC
FD535544 <-- ATATTAGAAACGCGATGACTTCCACCAGCACCTATTAAAATGGTATCACC
EY913879 <-- ATATTAGAAACGCGATGACTTCCACCAGCTCCTATTAAAATGGTATCACC
FD531182 --> ATATTAGAAACGCGATGACTTCCACCAGCACCTATTAAAATGGTATCACC
EY896640 --> ATATTAGAAACGCGATGACTTCCACCAGCTCCTATTAAAATGGTATCACC
651 - 701
UN18189 --> AGGTCTTGCAGCAGATACAGCAGACTCAATGTCATGGAAAACTCCAGGGA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY449584 <-- AGGTCTTGCAGCAGATACAGCAGACTCAATGTCATGGAAAACTCCAGGGA
FY454038 <-- AGGTCTTGCAGCAGATACAGCAGACTCAATGTCATGGAAAACTCCAGGGA
FD535544 <-- AGGTCTTGCAGCAGATACAGCAGACTCAATGTCATGGAAAACTCCAGGGA
EY913879 <-- AGGTCTGGCAGCAGATACAGCAGACTCAATGTCATGGAAAACTCCAGGGA
FD531182 --> AGGTCTTGCAGCAGATACAGCAGACTCAATGTCATGGAAAACTCCAGGGA
EY896640 --> AGGTCTTGCAGCAGATACAG..............................
701 - 751
UN18189 --> GTG---ATAAACCCTTCACAAAAGGGTCGACTCGTAGCCACAAGCGAGGG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY449584 <-- GTG---ATAAACCCTTCACAAAAGGGTCGACTCGTAGCCACAAGCGAGGG
FY454038 <-- GTG---ATAAACCCTTCACAAAAGGGTCGACTCGTAGCCACAAGCGAGGG
FD535544 <-- GTG---ATAAACCCTTCACAAAAGGGTCGACTCGTAGCCACAAGCGAGGG
EY913879 <-- GTGGCGATAAATCCTTCACAAAAGGGTCGACTCGTAACCACAAGCGAGGG
FD531182 --> GTG---ATAAACCCTTCACA..............................
EY896640 --> ..................................................
751 - 801
UN18189 --> TGACAGGCCAGATATCTCCATCTGTGGCAAACGAGTGCTGTGTTATACCT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY449584 <-- TGACAGGCCAGATATCTCCATCTGTGGCAAACGAGTGCTGTGTTATACCT
FY454038 <-- TGACAGGCCAGATATCTCCATCTGTGGCAAACGAGTGCTGTGTTATACCT
FD535544 <-- TGACAGGCCAGATATCTCCATCTGTGGCAAACGAGTGCTGTGTTATACCT
EY913879 <-- TGACAAGCCAGATATCTCCATCTGTGGCAAACGAGTGCTGTGTTATACCT
FD531182 --> ..................................................
EY896640 --> ..................................................
801 - 851
UN18189 --> ATCAGGAATTGGAGAGAGGAAGCTGAGGATGTGCATGAGGCAACCATCAT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY449584 <-- ATCAGGAATTGGAGAGAGGAAGCTGAGGATGTGCATGAGGCAACCATCAT
FY454038 <-- ATCAGGAATTGGAGAGAGGAAGCTGAGGATGTGCATGAGGCAACCATCAT
FD535544 <-- ATCAGGAATTGGAGAGAGGAAGCTGAGGATGTGCATGAGGCAACCATCAT
EY913879 <-- ATCAGGAATTGGAGAGAGGAAGCTGAGGATGTGCATGAGGCAACCATCAT
FD531182 --> ..................................................
EY896640 --> ..................................................
851 - 901
UN18189 --> CGAGATTGTTAAGAGATGTGAGAAACTCATGTTTCATTCTCTTCTTCTTC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY449584 <-- CGAGATTGTTAAGAGATGTGAGAAACTCATGTTTCATTCTCTTCTTCTTC
FY454038 <-- CGAGATTGTTAAGAGATGTGAGAAACTCATGTTTCATTCTCTTCTTCTTC
FD535544 <-- CGAGATTGTTAAGAGATGTGAGAAACTCATGTTTCATTCTCTTCTTCTTC
EY913879 <-- CGAGATTGTTAAGAGATGTGAGAAACTCATGTTTCATTCTCTTCTTCTTC
FD531182 --> ..................................................
EY896640 --> ..................................................
901 - 951
UN18189 --> -T--TCATCCTCGGTTCGGTGATTCGCTTGTCGTCAAGCTTTGAGATTTT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY449584 <-- -T--TCATCCTCGGTTCGGTGATTCGCTTGTCGTCAAGCTTTGAGATATG
FY454038 <-- -T--TCATCCTCGGTTCGGTGATTCGCTTGTCGTCAAGCTTTGAGATTTT
FD535544 <-- -T--TCATCCTCGGTTCGGTGATTCGCTTGTCGTCAAGCTTTGAGATTTT
EY913879 <-- ATCATCATCCTCGGTTCGGTGATTCGCTTGTCGTCAAGCTTTGAGATTTT
FD531182 --> ..................................................
EY896640 --> ..................................................
951 - 1001
UN18189 --> AGGAGTCTCCATGGAAGGAAGCAATCAATGAACCCTAAACTCCTCGCCGT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY449584 <-- AGGAGTCTCCATGGAAGG................................
FY454038 <-- AGGAGTCTCCATGGAAGG................................
FD535544 <-- AGGAGTCTCCATGGAAGGAAGCAATCAATGAACCCTAAACTCCTCGCCGT
EY913879 <-- AGGAGTCTCCATGGAAGGAAGCAATCAATcc...................
FD531182 --> ..................................................
EY896640 --> ..................................................
1001 - 1051
UN18189 --> CCC
~~~
FY449584 <-- ...
FY454038 <-- ...
FD535544 <-- CCC
EY913879 <-- ...
FD531182 --> ...
EY896640 --> ...
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