RadishBase

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Alignment for radish unigene UN18300

               -1     -     49
UN18300        --> ..GGACAACAACAACAACAACAATGGCCACTTCAAGAACATTCATGTCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728025       <-- ........................GGCCACTTCAAGAACATTCATGTCCT
EV531254       <-- ..................................................
EX760323       <-- ..................................................
FD528910       <-- ..................................................
FD538897       <-- ..................................................
EY901756       <-- ..................................................
FD574412       <-- ..................................................
EY893894       <-- ..................................................
FD984817       <-- ..................................................
FD538601       <-- ..................................................
FD574301       <-- ..................................................
EX756534       --> ..GGACAACAACAACAACAACAATGGCCACTTCAAGAACATTCATGTCCT
EY897636       --> ..GGACAACAACAACAACAACAATGGCCACTTCAAGAACATTCATGTCCT
FD570257       --> ..GGACA-CAACAACAACAACAATGGCCACTTCAAGAACATTCATGTCCT
EV550276       --> ...GACAACAACAACAACAACAATGGCCACTTCAAGAACATTCATGTCCT
EY905288       --> ggacACAACAACAACAACAACAATGGCCACTTCAAGAACATTCATGTCCT
EY907288       --> .gacACAACAACAACAACAACAATGGTCACTTCAAGAACATTCATGTCCT
FD542561       --> ggacACAACAACAACAACAACAATGGCCACTTCAAGAACATTCATGTCCT
FD542965       --> .....gAACAACAACAACAACAATGGCCACTTCAAGAACATTCATGTCCT
EV526885       --> ........................GGCCACTTCAAGAACATTCATGTCCT
EW723971       --> ........................GGCCACTTCAAGAACATTCATGTCCT
FD532435       --> ........................GGCCACTTCAAGAACATTCATGTCCT
FD570403       --> ........................GGCCACTTCAAGAACATTCATGTCCT
FD988971       --> .......................................ATTCATGTCCT
EW724065       --> ..................................................

               49     -     99
UN18300        --> CTACTCTATTCATTTTCTTCCTTGTCATGGCAACAACCAATGGTCAGGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728025       <-- CTACTCTATTCATTTTCTTCCTTGTCATGGCAACAACCAATGGTCAGGCT  Raphanus sativus cv Early Scarlet Globe
EV531254       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX760323       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD528910       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD538897       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY901756       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD574412       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY893894       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD984817       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD538601       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD574301       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX756534       --> CTACTCTGTTCATTTTCTTCCTTGTCATGGCAACAACCAATGGTCAGGCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY897636       --> CTACTCTATTCATTTTCTTCCTTGTCATGGCAACAACCAATGGTCAGGCT  Raphanus raphanistrum subsp. maritimus
FD570257       --> CTACTCTATTCATTTTCTTCCTTGTCACGGCAACAACCAATGGTCAGGCT  Raphanus sativus cv Early Scarlet Globe
EV550276       --> CTACTCTATTCATTTTCTTCCTTGTCATGGCAACAACCAATGGTCAGGCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY905288       --> CTACTCTGTTCATTTTCTTCCTTGTCATGGCAACAACCAATGGTCAGGCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY907288       --> CTACTCTGTTCATTTTCTTCCTTGTCATGGCAACAACCAATGGTCAGGCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD542561       --> CTACTCTGTTCATTTTCTTCCTTGTCATGGCAACAACCAATGGTCAGGCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD542965       --> CTACTCTGTTCATTTTCTTCCTTGTCATGGCAACAACCAATGGTCAGGCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV526885       --> CTACTCTATTCATTTTCTTCCTTGTCATGGCAACAACCAATGGTCAGGCT  Raphanus raphanistrum subsp. maritimus
EW723971       --> CTACTCTATTCATTTTCTTCCTTGTCATGGCAACAACCAATGGTCAGGCT  Raphanus sativus cv Early Scarlet Globe
FD532435       --> CTACTCTATTCATTTTCTTCCTTGTCATGGCAACAACCAATGGTCAGGCT  Raphanus raphanistrum subsp. maritimus
FD570403       --> CTACTCTATTCATTTTCTTCCTTGTCATGGCAACAACCAATGGTCAGGCT  Raphanus sativus cv Early Scarlet Globe
FD988971       --> CTACTCTATTCATTTTCTTCCTTGTCATGGCAACAACCAATGGTCAGGCT  Raphanus raphanistrum subsp. landra
EW724065       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               99     -    149
UN18300        --> CCAGCTCCAACCCCTTCAGGTCCAACCAACATAACCGCAGTCCTAGAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728025       <-- CCAGCTCCAACCCCTTCAGGTCCAACCAACATAACCGCGGTCCTAGAAAA  Raphanus sativus cv Early Scarlet Globe
EV531254       <-- .................AGGTCCAACCAACATAACCGCAGTCCTAGAAAA  Raphanus raphanistrum subsp. maritimus
EX760323       <-- ...................GTCCAACCAACATAACCGCAGTCCTAGAAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD528910       <-- ............................ACATAACCGCAGTCCTAGAAAA  Raphanus raphanistrum subsp. maritimus
FD538897       <-- .............................................GAAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY901756       <-- ..............................................AAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD574412       <-- ..............................................AAAA  Raphanus sativus cv Early Scarlet Globe
EY893894       <-- ...............................................AAA  Raphanus raphanistrum subsp. maritimus
FD984817       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD538601       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD574301       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX756534       --> CCAGCTCCAACCCCTTCAGGTCCAACCAACATAACCGCAGTCCTAGAAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY897636       --> CCAGCTCCAACCCCTTCAGGTCCAACCAACATAACCGCAGTCCTAGAAAA  Raphanus raphanistrum subsp. maritimus
FD570257       --> CCAGCTCCAACCCCTTCAGGTCCAACCAACATAACCGCGGTCCTAGAAAA  Raphanus sativus cv Early Scarlet Globe
EV550276       --> CCAGCTCCAACCCCTTCAGGTCCAACCAACATAACCGCAGTCCTAGAAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY905288       --> CCAGCTCCAACCCCTTCAGGTCCAACCAACATAACCGCAGTCCTAGAAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY907288       --> CCAGCTCCAACCCCTTCAGGTCCAACCAACATAACCGCAGTCCTAGAAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD542561       --> CCAGCTCCAACCCCTTCAGGTCCAACCAACATAACCGCAGTCCTAGAAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD542965       --> CCAGCTCCAACCCCTTCAGGTCCAACCAACATAACCGCAGTCCTAGAAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV526885       --> CCAGCTCCAACCCCTTCAGGTCCAACCAACATAACCGCAGTCCTAGAAAA  Raphanus raphanistrum subsp. maritimus
EW723971       --> CCAGCTCCAACCCCTTCAGGTCCAACCAACATAACCGCGGTCCTAGAAAA  Raphanus sativus cv Early Scarlet Globe
FD532435       --> CCAGCTCCAACCCCTTCAGGTCCAACCAACATAACCGCAGTCCTAGAAAA  Raphanus raphanistrum subsp. maritimus
FD570403       --> CCAGCTCCAACCCCTTCAGGTCCAACCAACATAACCGCGGTCCTAGAAAA  Raphanus sativus cv Early Scarlet Globe
FD988971       --> CCAGCTCCAACCCCTTCAGGTCCAACCAACATAACCGCAGTCCTAGAAAA  Raphanus raphanistrum subsp. landra
EW724065       --> .......................................GTCCTAGAAAA  Raphanus sativus cv Early Scarlet Globe

               149    -    199
UN18300        --> GGCTGGTCAATTCACAATGTTCATAAGACTCCTCAAGAGCACCCAAGCCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728025       <-- GGCTGGTCAATTCACAATGTTCATAAGACTCCTCAAGAGCACCCAAGCCG
EV531254       <-- GGCTGGTCAATTCACAATGTTCATAAGACTCCTCAAGAGCACCCAAGCCG
EX760323       <-- GGCTGGTCAATTCACAATGTTCATAAGACTCCTCAAGAGCACCCAAGCCG
FD528910       <-- GGCTGGTCAATTCACAATGTTCATAAGACTCCTCAAGAGCACCCAAGCCG
FD538897       <-- GGCTGGTCAATTCACAATGTTCATAAGACTCCTCAAGAGCACCCAAGCCG
EY901756       <-- GGCTGGTCAATTCACAATGTTCATAAGACTCCTCAAGAGCACCCAAGCCG
FD574412       <-- GGCTGGTCAATTCACAATGTTCATAAGACTCCTCAAGAGCACCCAAGCCG
EY893894       <-- GGCTGGTCAATTTACAATGTTCATAAGACTCCTCAAGAGCACCCAAGCCG
FD984817       <-- ..................................................
FD538601       <-- ..................................................
FD574301       <-- ..................................................
EX756534       --> GGCTGGTCAATTCACAATGTTCATAAGACTCCTCAAGAGCACCCAAGCCG
EY897636       --> GGCTGGTCAATTTACAATGTTCATAAGACTCCTCAAGAGCACCCAAGCCG
FD570257       --> GGCTGGTCAATTCACAATGTTCATAAGACTCCTCAAGAGCACCCAAGCCG
EV550276       --> GGCTGGTCAATTCACAATGTTCATAAGACTCCTCAAGAGCACCCAAGCCG
EY905288       --> GGCTGGTCAATTCACAATGTTCATAAGACTCCTCAAGAGCACCCAAGCCG
EY907288       --> GGCTGGTCAATTCACAATGTTCATAAGACTCCTCAAGAGCACCCAAGCCG
FD542561       --> GGCTGGTCAATTCACAATGTTCATAAGACTCCTCAAGAGCACCCAAGCCG
FD542965       --> GGCTGGTCAATTCACAATGTTCATAAGACTCCTCAAGAGCACCCAAGCCG
EV526885       --> GGCTGGTCAATTCACAATGTTCATAAGACTCCTCAAGAGCACCCAAGCCG
EW723971       --> GGCTGGTCAATTCACAATGTTCATAAGACTCCTCAAGAGCACCCAAGCCG
FD532435       --> GGCTGGTCAATTCACAATGTTCATAAGACTCCTCAAGAGCACCCAAGCCG
FD570403       --> GGCTGGTCAATTCACAATGTTCATAAGACTCCTCAAGAGCACCCAAGCCG
FD988971       --> GGCTGGTCAATTCACAATGTTCATAAGACTCCTCAAGAGCACCCAAGCCG
EW724065       --> GGCTGGTCAATTCACAATGTTCATAAGACTCCTCAAGAGCACCCAAGCCG

               199    -    249
UN18300        --> CAGACCAAATCAACACTCAGCTCAACTCTTCCTCCAGCCAAGGCCTAACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728025       <-- CAGACCAAATCAACACTCAGCTCAACTCTTCCTCTAGCCAAGGCCTAACC  Raphanus sativus cv Early Scarlet Globe
EV531254       <-- CAGACCAAGTCAACACTCAGCTCAACTCTTCCTCCAGCCAAGGCCTAACC  Raphanus raphanistrum subsp. maritimus
EX760323       <-- CAGACCAAATCAACACTCAGCTCAATTCTTCCTCCAGCCAAGGCCTAACC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD528910       <-- CAGACCAAATCAACACTCAGCACAACTCTTCCTCCAGCCAAGGCCTAACC  Raphanus raphanistrum subsp. maritimus
FD538897       <-- CATACCAAATCAACACTCAGCTCAATTCTTCCTCCAGCCAAGGCCTAACC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY901756       <-- CAGACCAAATCAACACTCAGCTCAATTCTTCCTCCAGCCAAGGCCTAACC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD574412       <-- CAGACCAAATCAACACTCAGCTCAACTCTTCCTCTAGCCAAGGCCTAACC  Raphanus sativus cv Early Scarlet Globe
EY893894       <-- CAGACCAAATCAACACTCAGCTCAACTCTTCCTCCAGCCAAGGCCTAACC  Raphanus raphanistrum subsp. maritimus
FD984817       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD538601       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD574301       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX756534       --> CAGACCAAATCAACACTCAGCTCAATTCTTCCTCCAGCCAAGGCCTAACC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY897636       --> CAGACCAAATCAACACTCAGCTCAACTCTTCCTCCAGCCAAGGCCTAACC  Raphanus raphanistrum subsp. maritimus
FD570257       --> CAGACCAAATCAACACTCAGCTCAACTCTTCCTCTAGCCAAGGCCTAACC  Raphanus sativus cv Early Scarlet Globe
EV550276       --> CAGACCAAATCAACACTCAGCTCAACTCTTCCTCCAGCCAAGGCCTAACC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY905288       --> CAGACCAAATCAACACTCAGCTCAATTCTTCCTCCAGCCAAGGCCTAACC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY907288       --> CAGACCAAATCAACACTCAGCTCAATTCTTCCTCCAGCCAAGGCCTAACC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD542561       --> CAGACCAAATCAACACTCAGCTCAATTCTTCCTCCAGCCAAGGCCTAACC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD542965       --> CATACCAAATCAACACTCAGCTCAATTCTTCCTCCAGCCAAGGCCTAACC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV526885       --> CAGACCAAGTCAACACTCAGCTCAACTCTTCCTCCAGCCAAGGCCTAACC  Raphanus raphanistrum subsp. maritimus
EW723971       --> CAGACCAAATCAACACTCAGCTCAACTCTTCCTCTAGCCAAGGCCTAACC  Raphanus sativus cv Early Scarlet Globe
FD532435       --> CAGACCAAATCAACACTCAGCACAACTCTTCCTCCAGCCAAGGCCTAACC  Raphanus raphanistrum subsp. maritimus
FD570403       --> CAGACCAAATCAACACTCAGCTCAACTCTTCCTCTAGCCAAGGCCTAACC  Raphanus sativus cv Early Scarlet Globe
FD988971       --> CAGACCAAATCAACACTCAGCTCAACTCTTCCTCCAGCCAAGGCCTAACC  Raphanus raphanistrum subsp. landra
EW724065       --> CAGACCAAATCAACACTCAGCTCAACTCTTCCTCTAGCCAAGGCCTAACC  Raphanus sativus cv Early Scarlet Globe

               249    -    299
UN18300        --> GTGTTTGCCCCTACCGACAACGCATTTAGCAGCCTCAAATCCGGAACCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728025       <-- GTGTTTGCCCCTACCGACAACGCATTTAGCAGCCTCAAATCCGGAACCTT
EV531254       <-- GTGTTTGCCCCTACCGACAACGCATTTAGCAGCCTCAAATCCGGAACCTT
EX760323       <-- GTGTTTGCCCCTACCGACAACGCATTTAGCAGCCTCAAATCCGGAACCTT
FD528910       <-- GTGTTTGCCCCTACCGACAACGCATTTAGCAGCCTCAAATCCGGAACCTT
FD538897       <-- GTGTTTGCCCCTACCGACAACGCATTTAGCAGCCTCAAATCCGGAACCTT
EY901756       <-- GTGTTTGCCCCTACCGACAACGCATTTAGCAGCCTCAAATCCGGAACCTT
FD574412       <-- GTGTTTGCCCCTACCGACAACGCATTTAGCAGCCTCAAATCCGGGACCTT
EY893894       <-- GTGTTTGCCCCTACCGACAACGCATTTAGCAGCCTCAAATCCGGAACCTT
FD984817       <-- ..........................................GGAACCTT
FD538601       <-- ...........................................GAACCTT
FD574301       <-- ..................................................
EX756534       --> GTGTTTGCCCCTACCGACAACGCATTTAGCAGCCTCAAATCCGGAACCTT
EY897636       --> GTGTTTGCCCCTACCGACAACGCATTTAGCAGCCTCAAATCCGGAACCTT
FD570257       --> GTGTTTGCCCCTACCGACAACGCATTTAGCAGCCTCAAATCCGGAACCTT
EV550276       --> GTGTTTGCCCCTACCGACAACGCATTTAGCAGCCTCAAATCCGGAACCTT
EY905288       --> GTGTTTGCCCCTACCGACAACGCATTTAGCAGCCTCAAATCCGGAACCTT
EY907288       --> GTGTTTGCCCCTACCGACAACGCATTTAGCAGCCTCAAATCCGGAACCTT
FD542561       --> GTGTTTGCCCCTACCGACAACGCATTTAGCAGCCTCAAATCCGGAACCTT
FD542965       --> GTGTTTGCCCCTACCGACAACGCATTTAGCAGCCTCAAATCCGGAACCTT
EV526885       --> GTGTTTGCCCCTACCGACAACGCATTTAGCAGCCTCAAATCCGGAACCTT
EW723971       --> GTGTTTGCCCCTACCGACAACGCATTTAGCAGCCTCAAATCCGGAACCTT
FD532435       --> GTGTTTGCCCCTACCGACAACGCATTTAGCAGCCTCAAATCCGGAACCTT
FD570403       --> GTGTTTGCCCCTACCGACAACGCATTTAGCAGCCTCAAATCCGGGACCTT
FD988971       --> GTGTTTGCCCCTACCGACAACGCATTTAGCAGCCTCAAATCCGGAACCTT
EW724065       --> GTATTTGCCCCTACCGACAACGCATTTAGCAGCCTCAAATCCGGAACCTT

               299    -    349
UN18300        --> GAACTCGTTATCCGACCAGCAAAAGGTCCAGCTTGTTCAGTTCCATGTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728025       <-- GAACTCGTTATCCGACCAGCAAAAGGTCCAGCTTGTTCAGTTCCATGTCC  Raphanus sativus cv Early Scarlet Globe
EV531254       <-- GAACTCGTTATCCGACCAGCAAAAGGTTCAGCTCGTTCAGTTCCATGTCC  Raphanus raphanistrum subsp. maritimus
EX760323       <-- GAACTCGTTATCCGACCAGCAAAAGGTCCAGCTTGTTCAGTTCCATGTCC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD528910       <-- GAACTCGTTATCCGACCAGCAAAAGGTTCAGCTTGTTCAGTTCCATGTCC  Raphanus raphanistrum subsp. maritimus
FD538897       <-- GAACTCGTTATCCGACCAGCAAAAGGTCCAGCTTGTTCAGTTCCATGTCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY901756       <-- GAACTCGTTATCCGACCAGCAAAAGGTCCAGCTTGTTCAGTTCCATGTCC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD574412       <-- GAACTCGTTATCCGACCAGCAAAAGGTCCAGCTTGTTCAGTTCCATGTCC  Raphanus sativus cv Early Scarlet Globe
EY893894       <-- GAACTCGTTATCCGACCAGCAAAAGGTTCAGCTTGTTCAGTTCCATGTCC  Raphanus raphanistrum subsp. maritimus
FD984817       <-- GAACTCGTTATCCGACCAGCAAAAGGTTCAGCTTGTTCAGTTCCATGTCC  Raphanus raphanistrum subsp. landra
FD538601       <-- GAACTCGTTATCCGACCAGCAAAAGGTCCAGCTTGTTCAGTTCCATGTCC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD574301       <-- .........ATCCGACCAGCAAAAGGTCCAGCTTGTTCAGTTCCATGTCC  Raphanus sativus cv Early Scarlet Globe
EX756534       --> GAACTCGTTATCCGACCAGCAAAAGGTCCAGCTTGTTCAGTTCCATGTCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY897636       --> GAACTCGTTATCCGACCAGCAAAAGGTTCAGCTTGTTCAGTTCCATGTCC  Raphanus raphanistrum subsp. maritimus
FD570257       --> GAACTCGTTATCCGACCAGCAAAAGGTCCAGCTTGTTCAGTTCCATGTCC  Raphanus sativus cv Early Scarlet Globe
EV550276       --> GAACTCGTTATCCGACCAGCAAAAGGTTCAGCTTGTTCAGTTCCATGTCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY905288       --> GAACTCGTTATCCGACCAGCAAAAGGTCCAGCTTGTTCAGTTCCATGTCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY907288       --> GAACTCGTTATCCGACCAGCAAAAGGTCCAGCTTGTTCAGTTCCATGTCC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD542561       --> GAACTCGTTATCCGACCAGCAAAAGGTCCAGCTTGTTCAGTTCCATGTCC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD542965       --> GAACTCGTTATCCGACCAGCAAAAGGTCCAGCTTGTTCAGTTCCATGTCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV526885       --> GAACTCGTTATCCGACCAGCAAAAGGTTCAGCTCGTTCAGTTCCATGTCC  Raphanus raphanistrum subsp. maritimus
EW723971       --> GAACTCGTTATCCGACCAGCAAAAGGTCCAGCTTGTTCAGTTCCATGTCC  Raphanus sativus cv Early Scarlet Globe
FD532435       --> GAACTCGTTATCCGACCAGCAAAAGGTTCAGCTTGTTCAGTTCCATGTCC  Raphanus raphanistrum subsp. maritimus
FD570403       --> GAACTCGTTATCCGACCAGCAAAAGGTCCAGCTTGTTCAGTTCCATGTCC  Raphanus sativus cv Early Scarlet Globe
FD988971       --> GAACTCGTTATCCGACCAGCAAAAGGTTCAGCTTGTTCAGTTCCATGTCC  Raphanus raphanistrum subsp. landra
EW724065       --> GAACTCGTTATCCGACCAGCAAAAGGTCCAGCTTGTTCAGTTCCATGTCC  Raphanus sativus cv Early Scarlet Globe

               349    -    399
UN18300        --> TTCCTACGCTCTTGACCATGCCTCAGTTCCAAACCGTTAGTAACCCCTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728025       <-- TTCCTACGCTCTTGACCATGCCTCAGTTCCAAACCGTTAGTAACCCCTTA  Raphanus sativus cv Early Scarlet Globe
EV531254       <-- TTCCTACGCTCTTGACCATGCCTCAGTTCCAAACCGTTAGTAACCCCTTA  Raphanus raphanistrum subsp. maritimus
EX760323       <-- TTCCTACACTCTTGACCATGCCTCAGTTCCAAACCGTTAGTAACCCCTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD528910       <-- TTCCTACGCTCTTGACCATGCCTCAGTTCCAAACCGTTAGTAACCCCTTA  Raphanus raphanistrum subsp. maritimus
FD538897       <-- TTCCTACACTCTTGACCATGCCTCAGTTCCAAACCGTTAGTAACCCCTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY901756       <-- TTCCTACACTCTTGACCATGCCTCAGTTCCAAACCGTTAGTAACCCCTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD574412       <-- TTCCTACGCTCTTGACCATGCCTCAGTTCCAAACCGTTAGTAACCCCTTA  Raphanus sativus cv Early Scarlet Globe
EY893894       <-- TTCCTACGCTCCTGACCATGCCTCAGTTCCAAACCGTTAGTAACCCCTTA  Raphanus raphanistrum subsp. maritimus
FD984817       <-- TTCCTACGCTCTTGACCATGCCTCAGTTCCAAACCGTTAGTAACCCCTTA  Raphanus raphanistrum subsp. landra
FD538601       <-- TTCCTACACTCTTGACCATGCCTCAGTTCCAAACCGTTAGTAACCCCTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD574301       <-- TTCCTACGCTCTTGACCATGCCTCAGTTCCAAACCGTTAGTAACCCCTTA  Raphanus sativus cv Early Scarlet Globe
EX756534       --> TTCCTACACTCTTGACCATGCCTCAGTTCCAAACCGTTAGTAACCCCTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY897636       --> TTCCTACGCTCCTGACCATGCCTCAGTTCCAAACCGTTAGTAACCCCTTA  Raphanus raphanistrum subsp. maritimus
FD570257       --> TTCCTACGCTCTTGACCATGCCTCAGTTCCAAACCGTTAGTAACCCCTTA  Raphanus sativus cv Early Scarlet Globe
EV550276       --> TTCCTACGCTCTTGACCATGCCTCAGTTCCAAACCGTTAGTAACCCCTTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY905288       --> TTCCTACACTCTTGACCATGCCTCAGTTCCAAACCGTTAGTAACCCCTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY907288       --> TTCCTACACTCTTGACCATGCCTCAGTTCCAAACCGTTAGTAACCCCTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD542561       --> TTCCTACACTCTTGACCATGCCTCAGTTCCAAACCGTTAGTAACCCCTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD542965       --> TTCCTACACTCTTGACCATGCCTCAGTTCCAAACCGTTAGTAACCCCTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV526885       --> TTCCTACGCTCTTGACCATGCCTCAGTTCCAAACCGTTAGTAACCCCTTA  Raphanus raphanistrum subsp. maritimus
EW723971       --> TTCCTACGCTCTTGACCATGCCTCAGTTCCAAACCGTTAGTAACCCCTTA  Raphanus sativus cv Early Scarlet Globe
FD532435       --> TTCCTACGCTCTTGACCATGCCTCAGTTCCAAACCGTTAGTAACCCCTTA  Raphanus raphanistrum subsp. maritimus
FD570403       --> TTCCTACGCTCTTGACCATGCCTCAGTTCCAAACCGTTAGTAACCCCTTA  Raphanus sativus cv Early Scarlet Globe
FD988971       --> TTCCTACGCTCTTGACCATGCCTCAGTTCCAAACCGTTAGTAACCCCTTA  Raphanus raphanistrum subsp. landra
EW724065       --> TTCCTACGCTCTTGACCATGCCTCAGTTCCAAACCGTTAGTAACCCCTTA  Raphanus sativus cv Early Scarlet Globe

               399    -    449
UN18300        --> CGCACGCAAGCTGGTGATGGCCAAAACGGTAAATTCCCTCTTAACATCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728025       <-- CGCACGCAAGCTGGTGATGGCCAAAACGGTAAATTCCCTCTCAACATCAC  Raphanus sativus cv Early Scarlet Globe
EV531254       <-- CGCACGCAAGCTGGTGATGGCCAAAACGGTAAATTCCCTCTTAACATCAC  Raphanus raphanistrum subsp. maritimus
EX760323       <-- CGCACGCAAGCTGGTGATGGCCAAAACGGTGAATTCCCTCTTAACATCAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD528910       <-- CGCACGCAAGCTGGTGATGGCCAAAACGGTAAATTCCCTCTTAATATCAC  Raphanus raphanistrum subsp. maritimus
FD538897       <-- CGCACGCAAGCTGGTGATGGCCAAAACGGTGAATTCCCTCTTAACATCAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY901756       <-- CGCACGCAAGCTGGTGATGGCCAAAACGGTGAATTCCCTCTTAACATCAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD574412       <-- CGCACGCAAGCTGGTGATGGCCAAAACGGTAAATTCCCTCTCAACATCAC  Raphanus sativus cv Early Scarlet Globe
EY893894       <-- CGCACGCAAGCTGGTGATGGCCAAAACGGTAAATTCCCTCTTAACATCAC  Raphanus raphanistrum subsp. maritimus
FD984817       <-- CGCACGCAAGCTGGTGATGGCCAAAACGGTAAATTCCCTCTTAACATCAC  Raphanus raphanistrum subsp. landra
FD538601       <-- CGCACGCAAGCTGGTGATGGCCAAAACGGTGAATTCCCTCTTAACATCAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD574301       <-- CGCACGCAAGCTGGTGATGGCCAAAACGGTAAATTCCCTCTCAACATCAC  Raphanus sativus cv Early Scarlet Globe
EX756534       --> CGCACGCAAGCTGGTGATGGCCAAAACGGTGAATTCCCTCTTAACATCAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY897636       --> CGCACGCAAGCTGGTGATGGCCAAAACGGTAAATTCCCTCTTAACATCAC  Raphanus raphanistrum subsp. maritimus
FD570257       --> CGCACGCAAGCTGGTGATGGCCAAAACGGTAAATTCCCTCTCAACATCAC  Raphanus sativus cv Early Scarlet Globe
EV550276       --> CGCACGCAAGCTGGTGATGGCCAAAACGGTAAATTCCCTCTTAACATCAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY905288       --> CGCACGCAAGCTGGTGATGGCCAAAACGGTGAATTCCCTCTTAACATCAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY907288       --> CGCACGCAAGCTGGTGATGGCCAAACCGGTGAATTCCCTCTTAACATCAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD542561       --> CGCACGCAAGCTGGTGATGGCCAAAACGGTGAATTCCCTCTTAACATCAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD542965       --> CGCACGCAAGCTGGTGATGGCCAAAACGGTGAATTCCCTCTTAACATCAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV526885       --> CGCACGCAAGCTGGTGATGGCCAAAACGGTAAATTCCCTCTTAACATCAC  Raphanus raphanistrum subsp. maritimus
EW723971       --> CGCACGCAAGCTGGTGATGGCCAAAACGGTAAATTCCCTCTCAACATCAC  Raphanus sativus cv Early Scarlet Globe
FD532435       --> CGCACGCAAGCTGGTGATGGCCAAAACGGTAAATTCCCTCTTAATATCAC  Raphanus raphanistrum subsp. maritimus
FD570403       --> CGCACGCAAGCTGGTGATGGCCAAAACGGTAAATTCCCTCTCAACATCAC  Raphanus sativus cv Early Scarlet Globe
FD988971       --> CGCACGCAAGCTGGTGATGGCCAAAACGGTAAATTCCCTCTTAACATCAC  Raphanus raphanistrum subsp. landra
EW724065       --> CGCACGCAAGCTGGTGATGGCCAAAACGGTAAATTCCCTCTCAACATCAC  Raphanus sativus cv Early Scarlet Globe

               449    -    499
UN18300        --> TAGCTCCGGTAACCAAGTCAACATCACCACGGGAGTTGTCAGCGCAACGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728025       <-- TAGCTCCGGTAACCAAGTCAACATCACCACCGGAGTTGTCAGCGCAACGG  Raphanus sativus cv Early Scarlet Globe
EV531254       <-- TAGCTCCGGTAACCAAGTCAACATCACCGCGGGAGTTGTCAGCGCAACGG  Raphanus raphanistrum subsp. maritimus
EX760323       <-- TAGCTCCGGTAACCAAGTCAACATCACCACGGGAGTTGTCAGCGCAACGG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD528910       <-- TAGCTCCGGTAACCAAGTCAACATCACCACGGGAGTTGTCAGCGCAACGG  Raphanus raphanistrum subsp. maritimus
FD538897       <-- TAGCTCCGGTAACCAGGTCAACATCACCACGGGAGTTGTCAGCGCAACGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY901756       <-- TAGCTCCGGTAACCAAGTCAACATCACCACGGGAGTTGTCAGCGCAACGG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD574412       <-- TAGCTCCGGTAACCAAGTCAACATCACCACCGGAGTTGTCAGCGCAACGG  Raphanus sativus cv Early Scarlet Globe
EY893894       <-- TAGCTCCGGTAACCAAGTCAACATCACCACGGGAGTTGTCAGCGCAACGG  Raphanus raphanistrum subsp. maritimus
FD984817       <-- TAGCTCCGGTAACCAAGTCAACATCACCACGGGAGTTGTCAGCGCAACGG  Raphanus raphanistrum subsp. landra
FD538601       <-- TAGCTCCGGTAACCAAGTCAACATCACCACGGGAGTTGTCAGCGCAACGG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD574301       <-- TAGCTCCGGTAACCAAGTCAACATCACCACCGGAGTTGTCAGCGCAACGG  Raphanus sativus cv Early Scarlet Globe
EX756534       --> TAGCTCCGGTAACCAAGTCAACATCACCACGGGAGTTGTCAGCGCAACGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY897636       --> TAGCTCCGGTAACCAAGTCAACATCACCACGGGAGTTGTCAGCGCAACGG  Raphanus raphanistrum subsp. maritimus
FD570257       --> TAGCTCCGGTAACCAAGTCAACATCACCACCGGAGTTGTCAGCGCAACGG  Raphanus sativus cv Early Scarlet Globe
EV550276       --> TAGCTCCGGTAACCAAGTCAACATCACCACGGGAGTTGTCAGCGCAACGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY905288       --> TAGCTCCGGTAACCAAGTCAACATCACCACGGGAGTTGTCAGCGCAACGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY907288       --> TAGCTCCGGTAACCAAGTCAACATCACCACGGGAGTTGTCAGCGCAACAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD542561       --> TAGCTCCGGTAACCAAGTCAACATCACCACGGGAGTTGTCAGCGCAACGG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD542965       --> TAGCTCCGGTAACCAGGTCAACATCACCACGGGAGTTGTCAGCGCAACGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV526885       --> TAGCTCCGGTAACCAAGTCAACATCACCGCGGGAGTTGTCAGCGCAACGG  Raphanus raphanistrum subsp. maritimus
EW723971       --> TAGCTCCGGTAACCAAGTCAACATCACCACCGGAGTTGTCAGCGCAACGG  Raphanus sativus cv Early Scarlet Globe
FD532435       --> TAGCTCCGGTAACCAAGTCAACATCACCACGGGAGTTGTCAGCGCAACGG  Raphanus raphanistrum subsp. maritimus
FD570403       --> TAGCTCCGGTAACCAAGTCAACATCACCACCGGAGTTGTCAGCGCAACGG  Raphanus sativus cv Early Scarlet Globe
FD988971       --> TAG...............................................  Raphanus raphanistrum subsp. landra
EW724065       --> TAGCTCCGGTAACCAAGTCAACATCACCACCGGAGTTGTCAGCGCAACGG  Raphanus sativus cv Early Scarlet Globe

               499    -    549
UN18300        --> TAGCTAACTCTGTCTACAGCGATAAGCAGCTTGCTGTGTATCAAGTGGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728025       <-- TAGCTAACTCTGTTTACAGCGATAAGCAGCTTGCTGTGTATCAAGTGGAT
EV531254       <-- TAGCTAACTCTGTTTACAGCGATAAGCAGCTTGCTGTGTATCAAGTGGAT
EX760323       <-- TAGCTAACTCTGTCTACACCGATAAGCAGCTTGCTGTGTATCAAGTGGAT
FD528910       <-- TAGCTAACTCTGTCTACAGCGATAAGCAGCTTGCTGTGTATCAAGTGGAT
FD538897       <-- TGGCTAACTCTGTCTACAGCGATAAGCAGCTTGCTGTGTATCAAGTGGAT
EY901756       <-- TAGCTAACTCTGTCTACACCGATAAGCAGCTTGCTGTGTATCAAGTGGAT
FD574412       <-- TAGCTAACTCTGTCTACAGCGATAAGCAGCTTGCTGTGTATCAAGTGGAT
EY893894       <-- TAGCTAACTCTGTCTACAGCGATAAGCAGCTTGCTGTGTATCAAGTGGAT
FD984817       <-- TAGCTAACTCTGCCTACAGCGATAAGCAGCTTGCTGTGTATCAAGTGGAT
FD538601       <-- TGGCTAACTCTGTTTACAGCGATAAGCAGCTTGCTGTGTATCAAGTGGAT
FD574301       <-- TAGCTAACTCTGTTTACAGCGATAAGCAGCTTGCTGTGTATCAAGTGGAT
EX756534       --> TAGCTAACTCTGTCTACACCGATAAGCAGCTTGCTGTGTATCAAGTGGAT
EY897636       --> TAGCTAACTCTGTCTACAGCGATAAGCAGCTTGCTGTGTATCAAGTGGAT
FD570257       --> TAGCTAACTCTGTCTACAGCGATAAGCAGCTTGCTGTGTATCAAGTGGAT
EV550276       --> TAGCTAACTCTGTCTACAGCGATAAGCAGCTTGCTGTGTATCAAGTGGAT
EY905288       --> TAGCTAACTCTGTCTACACCGATAAGCAGCTTGCTGTGTATCAAGTGGAT
EY907288       --> TGGCTAACTCTGTCTACAGCGATAAGCAGCTTGCTGTGTATCAAGCGGAT
FD542561       --> TGGCTAACTCTGTCTACAGCGATAAGCAGCTTGCTGTGTATCAAGTGGAT
FD542965       --> TGGCTAACTCTGTCTACAGCGATAAGCAGCTTGCTGTGTATCAAGTGGAT
EV526885       --> TAGCTAACTCTGTCTACAGCGATAAGCAGCTTGCTGTGTATCAAGTGGAT
EW723971       --> TAGCTAACTCTGTCTACAGCGATAAGCAGCTTGCTGTGTATCAAGTGGAT
FD532435       --> TAGCTAACTCTGTCTACAGCGATAAGCAGCTTGCTGTGTATCAAGTGGAT
FD570403       --> TAGCTAACTCTGTCTACAGCGATAAGCAGCTTGCTGTGTATCAAGTGGAT
FD988971       --> ..................................................
EW724065       --> TAGCTAACTCTGTCTACAGCGATAAGCAGCTTGCTGTGTATCAAGTGGAT

               549    -    599
UN18300        --> CAAGTTTTGCTGCCGTTAGCAATGTTTGGTTCAAGCTCAGCACCTGCTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728025       <-- CAAGTTTTGCTGCCGTTAGCAATGTTTGGTTCAAGCTCAGCACCTGCTCC
EV531254       <-- CAAGTTTTGCTGCCGTTAGCAATGTTTGGTTCAAGCTCAGCACCTGCTCC
EX760323       <-- CAAGTTTTGCTGCCGTTAGCAATGTTTGGTTCAAGCTCAGCGCCTGCTCC
FD528910       <-- CAAGTTTTGCTGCCGTTAGCAATGTTTGGTTCAAGCTCAGCACCTGCTCC
FD538897       <-- CAAGTTTTGCTACCGTTAGCAATGTTTGGTTCAAGCTCAGCACCTGCTCC
EY901756       <-- CAAGTTTTGCTGCCGTTAGCAATGTTTGGTTCAAGCTCAGCGCCTGCTCC
FD574412       <-- CAAGTTTTGCTGCCGTTAGCAATGTTTGGTTCAAGCTCAGCACCTGCTCC
EY893894       <-- CAAGTTTTGCTACCGTTAGCAATGTTTGGTTCAAGCTCAGCACCTGCTCC
FD984817       <-- CAAGTTTTGCTGCCGTTAGCAATGTTTGGTTCAAGCTCAGCACCTGCTCC
FD538601       <-- CAAGTTTTGCTACCGTTAGCAATGTTTGGTTCAAGCTCGGCTCCTGCTCC
FD574301       <-- CAAGTTTTGCTGCCGTTAGCAATGTTTGGTTCAAGCTCAGCACCTGCTCC
EX756534       --> CAAGTTTTGCTGCCGTTAGCAATGTTTGGTTCAAGCTCAGCGCCTGCTCC
EY897636       --> CAAGTTTTGCTACCGTTAGCAATGTTTGGTTCAAGCTCAGCACCTGCTCC
FD570257       --> CAAGTTTTGCTGCCGTTAGCAATGTTTGGTTCAAGCTCAGCACCTGCTCC
EV550276       --> CAAGTTTTGCTACCGTTAGCAATGTTTGGTTCAAGCTCAGCACCTGCTCC
EY905288       --> CAAGTTTTGCTGCCGTTAGCAATGTTTGGTTCAAGCTCAGCGCCTGCTCC
EY907288       --> CAAGTTTTGCTACCGTTAGCAATGTTTGGTTCAAGCTCGGCTCCTGCTCC
FD542561       --> CAAGTTTTGCTACCGTTAGCAATGTTTGGTTCAAGCTCGGCTCCTGCTCC
FD542965       --> CAAGTTTTGCTACCGTTAGCAATGTTTGGTTCAAGCTCAGCACCTGCTCC
EV526885       --> CAAGTTTTGCTGCCGTTAGCAATGTTTGGTTCAAGCTCAGCACCTGCTCC
EW723971       --> CAAGTTTTGCTGCCGTTAGCAATGTTTGGTTCAAGCTCAGCACCTGCTCC
FD532435       --> CAAGTTTTGCTGCCGTTAGCAATGTTTGGTTCAAGCTCAGCACCTGCTCC
FD570403       --> CAAGTTTTGCTGCCGTTAGCAATGTTTGGTTCAAGCTCAGCACCTGCTCC
FD988971       --> ..................................................
EW724065       --> CAAGTTTTGCTGCCGTTAGCAATGTTTGGTTCAAGCTCAGCACCTGCTCC

               599    -    649
UN18300        --> TGCGCCTGAGAAAGGTGGCTTGG-TTTCGAAAGGTTCAGCTCCAAGTGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728025       <-- TGCGCCTGAGAAAGGTGGCTTGG-TTTCGAAAGGTTCAGCTCCAAGTGGT
EV531254       <-- TGCGCCTGAGAAAGGTGGCTTGG-TTTCGAAAGGTTCAGCTCCAAGTGGT
EX760323       <-- TGCGCCTGAGAAAGGTGGCTTGG-TGTCGAAAGGTTCAGCTCCAAGTGGT
FD528910       <-- TGCGCCTGAGAAAGGTGGCTTGG-TTTCGAAAGGTTCAGCTCCAAGTGGT
FD538897       <-- TGCGCCTGAGAAAGGTGGCTTGG-TTTCGAAAGGTTCAGCTCCAAATGGT
EY901756       <-- TGCGCCTGAGAAAGGTGGCTTGG-TGTCGAAAGGTTCAGCTCCAAGTGGT
FD574412       <-- TGCGCCTGAGAAAGGTGGCTTGG-TTTCGAAAGGTTCAGCTCCAAGTGGT
EY893894       <-- TGCGCCTGAGAAAGGTGGCTTGG-TTTCGAAAGGTTCAGCTCCAAGTGGT
FD984817       <-- TGCGCCTGAGAAAGGTGGCTTGG-TTTCGAAAGGTTCAGCTCCAAGTGGT
FD538601       <-- TGCGCCTGAGAAAGGTGGCTTGG-TTTCGAAAGGTTCAGCTCCAAGTGGT
FD574301       <-- TGCGCCTGAGAAAGGTGGCTTGG-TTTCGAAAGGTTCAGCTCCAAGTGGT
EX756534       --> TGCGCCTGAGAAAGGTGGCTTGG-TGTCGAAAGGTTCAGCTCCAAGTGGT
EY897636       --> TGCGCCTGAGAAAGGTGGCTTGG-TTTCGAAAGGTTCAGCTCCAAGTGGT
FD570257       --> TGCGCCTGAGAAAGGTGGCTTGG-TTTCGAAAGGTTCAGCTCCAAGTGGT
EV550276       --> TGCGCCTGAGAAAGGTGGCTTGG-TTTCGAAAGGTTCAGCTCCAAGTGGT
EY905288       --> TGCGCCTGAGAAAG-TGGCTTGG-TGTCGAA...................
EY907288       --> TGCGCCTGAGAAAGGTGGCTTGG-TTTCGAAAGGTTCAGCTCCAAGTGGT
FD542561       --> TGCGCCTGAGAAAGGTGGCTTGG-TTTCGAAAGGTTCAGCTCCAAGTGGT
FD542965       --> TGCGCCTGAGAAAGGTGGCTTGG-TTTCGAAAGGTTCAGCTCCAAATGGT
EV526885       --> TGCGCCTGAGAAAGGTGGCTTGG-TTTCGAAAGGTTCAGCTCCAAGTGGT
EW723971       --> TGCGCCTGAGAAAGGTGGCTTGG-TTTCGAAAGGTTCAGCTCCAAGTGGT
FD532435       --> TGCGCCTGAGAAAGGTGGCTTGG-TTTCGAAAGGTTCAGCTCCAAGTGGT
FD570403       --> TGCGCCTGAGAAAGGTGGCTTGG-TTTCGAAAGGTTCAGCTCCAAGTGGT
FD988971       --> ..................................................
EW724065       --> TGCGCCTGAGAAAGGTGGCTTGGGTTTCGAAAGGTTCAGCTCCAAGTGGT

               649    -    699
UN18300        --> GATGATGGAGGAGATTCTACTGATTCATCAGATACAGAGAGAATCAGATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728025       <-- GATGATGGAGGAGATTTTACTGATTCATCAGATACAGAGAGAATCAGATA
EV531254       <-- GATGATGGAGGAGATTCTACTGATTCATCAGATACAGAGAGAATCAGATA
EX760323       <-- GATGATGGAGGAGATTCTACTGATTCATCAGATACAGAGAGAATCAGATA
FD528910       <-- GATGATGGAGGAGATTCTACTGATTCATCAGATACAGAGAGAATCAGATA
FD538897       <-- GATGATGGAGGAGATTCTACTGATTCATCAGATACAGAGAGAATCAGATA
EY901756       <-- GATGATGGAGGAGATTCTACTGATTCATCAGATACAGAGAGAATCAGATA
FD574412       <-- GATGATGGAGGAGATTCTACTGATTCATCAGATACAGAGAGAATCAGATA
EY893894       <-- GATGATGGAGGAGATTCTACTGATTCATCAGATACAGAGAGAATCAGATA
FD984817       <-- GATGATGGAGGAGATTCTACTGATTCATCAGATACAGAGAGAATCAGATA
FD538601       <-- GATGATGGAGGAGATTCTACTGATTCATCAGATACGGAGAGAATCAGATA
FD574301       <-- GATGATGGAGGAGATTTTACTGATTCATCAGATACAGAGAGAATCAGATA
EX756534       --> GATGATGGAGGAGATTCTACTGATTCATCAGATACAGAGAGAATCAGATA
EY897636       --> GATGATGGAGGAGATTCTACTGATTCATCAGATACAGAGAGAATCAGATA
FD570257       --> GATGATGGAGGAGATTCTACTGATTCATCAGATACAGAGAGAATCAGATA
EV550276       --> GATGATGGAGGAGATTCTACTGATTCATCAGATACAGAGAGAATCAGATA
EY905288       --> ..................................................
EY907288       --> GATGATGGAGGAGATTCTACTGATTCATCAGATACAGAGAGAATCAGATA
FD542561       --> GATGATGGAGGAGATTCTACTGATTCATCAGATACGGAGAGAATCAGATA
FD542965       --> GATGATGGAGGAGATTCTACTGATTCATCAGATACAGAGAGAATCAGATA
EV526885       --> GATGATGGAGGAGATTCTACTGATTCATCAGATACAGAGAGAATCAGATA
EW723971       --> GATGATGGAGGAGATTCTACTGATTCATCAGATACAGAGAGAATCAGATA
FD532435       --> GATGATGGAGGAGATTCTACTGATTCATCAGATACAGAGAGAATCAGATA
FD570403       --> GATGATGGAGGAGATTCTACTGATTCATCAGATACAGAGAGAATCAGATA
FD988971       --> ..................................................
EW724065       --> GATGATGGAGGAGATTCTACTGATTCATCAGATACAGAGAGAATCAGATA

               699    -    749
UN18300        --> TTGGTTCATCTCCACCATGGCAGCCATTGCTGCTTCTTCTATGTGGATAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728025       <-- TTGGTTCATCTCCACCATGGCAGCCATTGCTGCTTTTTCTATGTGGATAT
EV531254       <-- TTGGTTCATCTCCACCATGGCAGCCATTGCTGCTTCTTCTATGTGGATAT
EX760323       <-- TTGGTTCATCTCCACCATGGCAGCCATTGCCGCTTCTTCTATGTGGATAT
FD528910       <-- TTGGTTCATCTCCACCATGGCAGCCATTGCTGCTTCTTCTATGTGGATAT
FD538897       <-- TTGGTTCGTCTCCACCATTGCAGCCATTGCTGCTTCTTCTATGTGGATAT
EY901756       <-- TTGGTTCATCTCCACCATGGCAGCCATTGCTGCTTCTTCTATGTGGATAT
FD574412       <-- TTGGTTCATCTCCACCATGGCAGCCATTGCTGCTTCTTCTATGTGGATAT
EY893894       <-- TTGGTTCATCTCCACCATGGCAGCCATTGCTGCTTCTTCTATGTGGATAT
FD984817       <-- TTGGTTCATCTCCACTATGGCAGCCATTGCTGCTTCTTCTATGTGGATAT
FD538601       <-- TTGGTTCATCTCCACCATGGCAGCCATTGCTGCTTCTTCTATGTGGATAT
FD574301       <-- TTGGTTCATTTCCACCATGGCAGCCATTGCTGCTTTTTTTATGTGGATAT
EX756534       --> TTGGTTCATCTCCAC...................................
EY897636       --> TTGGTTCATCTCCACCATGGCAGCCATTGCTGCTTCTTCTATGTGGATAT
FD570257       --> TTGGTTCATCTCCACCATGGCAGCCATTGCTGCTTCTTCTATGTGGATAT
EV550276       --> TTGGTTCATCTCCACCATGGCAGCCATTGCTGCTTCTTCTATGTGGATAT
EY905288       --> ..................................................
EY907288       --> TTGGTTCATCTCCACCATGGCAGCCATTGCTGCTTCT-CTATGTGGATAT
FD542561       --> TTGGTTCATCTCCACCATGGCAGCCATTGCTGCTTCT-CTATGTGGATAT
FD542965       --> TTGGTTCGTCTCCACCATTGCAGCCATTGCTGCTTCTTCTATGTGGATAT
EV526885       --> TTGGTTCATCTCCACCATGGCAGCCATTGCTGCTTCTTCTATGTGGATAT
EW723971       --> TTGGTTCATCTCCACCATGGCAGCCATTGCTGCTTCTTCTATGTGGATAT
FD532435       --> TTGGTTCATCTCCACCATGGCAGCCATTGCTGCTTCTTCTATGTGGATAT
FD570403       --> TTGGTTCATCTCCACCATGGCAGCCATTGCTGCTTCTTCTATGTGGATAT
FD988971       --> ..................................................
EW724065       --> TTGGTTCATCTCCACCATGGCAGCCATTGCTGCTTCTTCTATGTGGATAT

               749    -    799
UN18300        --> AACACCATATTTGATTTTAAGAATAACGAATGAGCTTTAAATTTTGTTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728025       <-- AACACCATATTTGATTTTAAGAATAACGAATGAGCTc.............
EV531254       <-- AACACCATATTTGATTTTAAGAATAACGAATGAGCTTTAAATTTTGTTGT
EX760323       <-- AACACCATATTTGATTTTAAGAATAACGAATGAGCTTTAAATTTTGTTGT
FD528910       <-- AACACCATATTTGATTTTAAGAATAACGAATGAGCTTTAAATTTTGTTGT
FD538897       <-- AACACTATATTTGATTTTAAGAATAACGAATGAGCTTTAAATTTTGTTGT
EY901756       <-- AACACCATATTTGATTTTAAGAATAACGAATGAGCTTTAAATTTTGTTGT
FD574412       <-- AACACCATATTTGATTTTAAGAATAACGAATGAGCTCAAATTTTTGTTGT
EY893894       <-- AACACCATACTTGATTTTAAGAATAACGAATGAGCTTTAAATTTTGTTGT
FD984817       <-- AACACCATATTTGATTTTAAGAATAACGAATGAGCTTTAAATTTTGTTGT
FD538601       <-- AACACCATATTTGATTTTAAGAATAACGAATGAGCTTTAAATTTTGTTGT
FD574301       <-- AACACCATATTTGATTTTAAGAATAACGAATGAGCTCAAATTTTTGTTGT
EX756534       --> ..................................................
EY897636       --> AACACCATACTTGATT..................................
FD570257       --> A-CACCATATTTGATTTTAgatacgatgagctcaattttgtgtagttgag
EV550276       --> AACACCATATTTGATTTTAAGGATAACGAATGAGCTTTAAATTTTGTTGT
EY905288       --> ..................................................
EY907288       --> A-CACCATATTTGATTTTA-GA-TA-CGA-TGAGCTTTAA--TTTGTTGT
FD542561       --> A-CACCATATTTGATTTaagata...........................
FD542965       --> A-CACTATATTTGATTTTA-G-ATAACG-ATGAGCTTTAA--TTTGTTGT
EV526885       --> AACACCATATTTGATTTTAAGAATAACGAA....................
EW723971       --> AACACCATATTTGATTTTAAGAATAACGAATGAGCT..............
FD532435       --> AACACCATATTTGATTT-AAG-ATAACGAATGAGCTTTAAA.........
FD570403       --> A-CACCATATTTGATTTTA-GA-TA-CGAATGAGC...............
FD988971       --> ..................................................
EW724065       --> AACACCATATTTGATTTTAAGAATAACGAATGAGCTCAAATTTTTGTTGT

               799    -    849
UN18300        --> AATTTGAGTTTTGTGTTATCATGTTATTGTTTTGGTTCAAAAAATTACGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728025       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV531254       <-- AATTTGAGTTTTGTGTTATCGTGTTATTGTTTTGGTTCAAAAAATTACGA  Raphanus raphanistrum subsp. maritimus
EX760323       <-- AATTTGAGTTTCGTGTTATCATGTTATTGTTTTGGTTCAAAAAATTACGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD528910       <-- AATTTGAGTTTTGTGTTATCGTGTTATTGTTTTGGTTCAAAAAATTACGA  Raphanus raphanistrum subsp. maritimus
FD538897       <-- AATTTGAGTTTTGTGTTATCATGTTATTGTTTTGGTTCAAAAAATTACGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY901756       <-- AATTTGAGTTTTGTGTTATCATGTTATTGTTTTGGTTCAAAAAATTACGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD574412       <-- AGTTTGAGTTTTGTGTTATCATGTTATTGTTTTGGTTCAAAAAATTACGA  Raphanus sativus cv Early Scarlet Globe
EY893894       <-- AATTTGAGTTTTGTGTTATCGTGTTATTGTTTTGGTTCAAAAAATTACGA  Raphanus raphanistrum subsp. maritimus
FD984817       <-- AATTTGAGTTTTGTGTTATCGTGTTATTGTTTTGGTTCAAAAA.......  Raphanus raphanistrum subsp. landra
FD538601       <-- AATTTGAGTTTTGTGTTATCATGTTATTGTTTTGGTTCAAAAAATTACGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD574301       <-- AGTTTGAGTTTTGTGTTATCATGTTATTGTTTTGGTTCAAAAAATTACGA  Raphanus sativus cv Early Scarlet Globe
EX756534       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY897636       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD570257       --> tttgtgtatcatgtatgtttggtc..........................  Raphanus sativus cv Early Scarlet Globe
EV550276       --> AATTTGAGTTTTGTGTTATCGTGTTATTGTTTTGGTc.............  Raphanus raphanistrum subsp. raphanistrum (NY)
EY905288       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY907288       --> A-TTTGAGTTT-GTGTTATCATGTTGTTGTTTggtcaa............  Raphanus raphanistrum subsp. raphanistrum (MS)
FD542561       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD542965       --> A-TTTGAGTTT-GTG-TATCATGTTAT.......................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV526885       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EW723971       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD532435       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD570403       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD988971       --> ..................................................  Raphanus raphanistrum subsp. landra
EW724065       --> AGTTTGAGTTTTGTGTTATCATGTTATTGTTT-GGTTC............  Raphanus sativus cv Early Scarlet Globe

               849    -    899
UN18300        --> TTGAGATTGCACAATTTTTTTGATGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728025       <-- ..........................
EV531254       <-- TTGAGATTGCACAATTTTTTTcg...
EX760323       <-- TTGAGATTac................
FD528910       <-- TTGAGATTGCACAATTTTTTTGATGG
FD538897       <-- TTGAGATTGCAC..............
EY901756       <-- TTGAGATTGCACAATATTTTcg....
FD574412       <-- TTGAGATTGCACAATT..........
EY893894       <-- TTGAGATTGCACAATTTTTTTGATGG
FD984817       <-- ..........................
FD538601       <-- TTGAGATTGC................
FD574301       <-- TTGAGATTGCA...............
EX756534       --> ..........................
EY897636       --> ..........................
FD570257       --> ..........................
EV550276       --> ..........................
EY905288       --> ..........................
EY907288       --> ..........................
FD542561       --> ..........................
FD542965       --> ..........................
EV526885       --> ..........................
EW723971       --> ..........................
FD532435       --> ..........................
FD570403       --> ..........................
FD988971       --> ..........................
EW724065       --> ..........................