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Alignment for radish unigene UN18339

               -5     -     45
UN18339        --> ......CTCGCAAAATGTTATTTAGTAAAAGCATATAATATAAGATCAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD964714       <-- ......................................TATAAGATCAAA
FD557047       <-- ..................................................
EX904402       <-- ..................................................
EY914076       <-- ..................................................
FD530253       --> ..gcagCTCGCAAAATGTTATTTAGTAAAAGCATATAATATAAGATCAAA
FD960644       --> atacaaCTCGCAAAATGTTATTTAGTAAAAGCATATAATATAAGATCAAA
FD553241       --> ...................................TAATATAAGATCAAA
EY910193       --> ..................................................
FD554370       --> ..................................................

               45     -     95
UN18339        --> GCCTCTTAGTGAAAATATGACAAAAAAAGCAAGTTATATCATAT--CCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD964714       <-- GCCTCTTAGTGAAAATATGACAAAAAAAGCAAGTTATATCATAT--CCTA
FD557047       <-- ..................................................
EX904402       <-- ..................................................
EY914076       <-- ..................................................
FD530253       --> GCCTCTTAGTGAAAATATGACAAAAAAAGCAAGTTATATCATAT--CCTA
FD960644       --> GCCTCTTAGTGAAAATATGACAAAAAAAGCAAGTTATATCATAT--CCTA
FD553241       --> GCCTCTTAGTGAAAATATGACAAAAAA-GCAAGTTATATCATATATCCTA
EY910193       --> ................ATGACAAAAAAAGCAAGTTATATCATAT--CCTA
FD554370       --> ...................ggcAAAAAAGCAAGTTATATCATATATCCTA

               95     -    145
UN18339        --> TAACAAAATTATTACAGAACACAGAGTGAATACTGTGGCAAAAGCTCTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD964714       <-- TAACAAAATTATTACAGAACACAGAGTGAATACTGTGGCAAAAGCTCTAA
FD557047       <-- ..................................................
EX904402       <-- ..................................................
EY914076       <-- ..................................................
FD530253       --> TAACAAAATTATTACAGAACACAGAGTGAATACTGTGGCAAAAGCTCTAA
FD960644       --> TAACAAAATTATTACAGAACACAGAGTGAATACTGTGGCAAAAGCTCTAA
FD553241       --> TAACAAAATTATTACAGAACACAGAGTGAATACTGTGGCAAAAGCTCTAA
EY910193       --> TAACAAAATTATTACAGAACA--GAGTGAATACTGGGGCAAAAGCTCTAA
FD554370       --> TAACAAAATTATTACAGAACACAGAGTGAATACTGTGGCAAAAGCTCTAA

               145    -    195
UN18339        --> ACTTTCAGATGAAACCAGAACGTTTATGACAAAAGAAAAATGATCCGGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD964714       <-- ACTTTCAGATGAAACCAGAACGTTTATGACAAAAGAAAAATGATCCGGAG
FD557047       <-- ..................................agAAAATGATC-GGAG
EX904402       <-- ..................................................
EY914076       <-- ..................................................
FD530253       --> ACTTTCAGATGAAACCAGAACGTTTATGACAAAAGAAAAATGATCCGGAG
FD960644       --> ACTTTCAGATGAAACCAGAACGTTTATGACAAAAGAAAAATGATCCGGAG
FD553241       --> ACTTTCAGATGAAACCAGAACGTTTATGACAAAAGAAAAATGATCCGGAG
EY910193       --> ACTTTCAAATGAAACCAGAACGTTTATGACAAAAAAAAAATGATCCGGAG
FD554370       --> ACTTTCAGATGAAACCAGAACGTTTATGACAAAAGAAAAATGATCCGGAG

               195    -    245
UN18339        --> TTTCATCAGTTATCTTCTTCGTGATCCCGGTTCCGTGAGTCCTGAGAGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD964714       <-- TTTCATCAGTTATCTTCTTCGTGATCCCGGTTCCGTGAGTCCTGAGAGCC
FD557047       <-- TTCCATCAGTTATCT-CTTCGTGATCCCGGTTCCGTGAGTTCTGAGAGC-
EX904402       <-- ..................................................
EY914076       <-- ..................................................
FD530253       --> TTTCATCAGTTATCTTCTTCGTGATCCCGGT-CCGTGAGTCCTGAGAGCC
FD960644       --> TTTCATCAGTTATCTTCTTCGTGATCCCGGTTCCGTGAGTCCTGAGAGCC
FD553241       --> TTCCATCAGTTATCTTCTTCGTGATCCCGGTTCCGTGAGTTCTGAGAGCC
EY910193       --> TTTCATCAGTTATCTTCTTCGTGATCCCGGTTCCGTGAGTCCTGAAAGCC
FD554370       --> TTTCATCAGTTATCTTCTTCGTGATCCCAGTTCCGTGAGTCCTGAGAGCC

               245    -    295
UN18339        --> TGCCTGAAGGTTAATGAACTGAGAGACCAGTAGCTTCGAGATTCCACTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD964714       <-- TGCCTGAAGGTTAATGAACTGAGAGACCAGTAGCTTCGAGATTCCACTTA
FD557047       <-- TG-CTGAAGGTTAATGAACTGAGAGACCAGTAGCTTCGAGATTCCACTTA
EX904402       <-- ..................................................
EY914076       <-- ..................................................
FD530253       --> TGCCTGAAGGTTAATGAACTGAGAGACCAGTAGCTTCGAGATTCCACTTA
FD960644       --> TGCCTGAAGGTTAATGAACTGAGAGACCAGTAGCTTCGAGATTCCACTTA
FD553241       --> TGCCTGAAGGTTAATGAACTGAGAGACCAGTAGCTTCGAGATTCCACTTA
EY910193       --> TGCCTGAAGGTTAATGAACTGAGAGGCCAGTAGCTTCGAAATTCCACTTA
FD554370       --> TGCCTGAAGGTTAATGAACTGAGAGACCAGTAGCTTCGAGATTCCACTTA

               295    -    345
UN18339        --> TAGCTGCTTCCACTTCATCTGGTTCCTTTGACCCTCTCAACCCACAGTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD964714       <-- TAGCTGCTTCCACTTCATCTGGTTCCTTTGACCCTCTCAACCCACAGTAC
FD557047       <-- TAGCTGCTTCCACCTCATCTGGTTCCTTTGACCCTCTCAACCCACAGTAC
EX904402       <-- ..................................................
EY914076       <-- ..................................................
FD530253       --> TAGCTGCTTCCACTTCATCTGGTTCCTTTGACCCTCTCAACCCACAGTAC
FD960644       --> TAGCTGCTTCCACTTCATCTGGTTCCTTTGACCCTCTCAACCCACAGTAC
FD553241       --> TAGCTGCTTCCACCTCATCTGGTTCCTTTGACCCTCTCAACCCACAGTAC
EY910193       --> TAGCTGCTTCCCCCTCATCTGGTTCCTTTGACCCTCTCAACCCACAGTAC
FD554370       --> TAGCTGCTTCCACTTCATCTGGTTCCTTTGACCCTCTCAACCCGCAGTAC

               345    -    395
UN18339        --> TCCCCTGCTGCAACTTGCGTCTTCTTCGACGTTGCAAGAACTTTCTCCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD964714       <-- TCCCCTGCTGCAACTTGCGTCTTTTTCGACGTTGCAAGAACTTT-TCCAA  Raphanus raphanistrum subsp. maritimus
FD557047       <-- TCCCCTGCTGCAACTTGCGTCTTCTTCGACGTTGCAAGAACTTTCTCCAA  Raphanus raphanistrum subsp. landra
EX904402       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY914076       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD530253       --> TCCCCTGCTGCAACTTGCGTCTTTTTCGACGTTGCAAGAACTTTCTCCAA  Raphanus raphanistrum subsp. maritimus
FD960644       --> TCCCCTGCTGCAACTTGCGTCTTTTTCGACGTTGCAAGAACTTT-TCCAA  Raphanus raphanistrum subsp. maritimus
FD553241       --> TCCCCTGCTGCAACTTGCGTCTTCTTCGACGTTGCAAGAACTTTCTCCAA  Raphanus raphanistrum subsp. landra
EY910193       --> TCCCCTGCTGCAACTTGCGTCTTCTTCGACGTTGCAAGAACTTTCTCCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD554370       --> TCCCCTGCTGCAACTTGCGTCTTCTTCGACGTTGCAAGAACTTTCTCCAA  Raphanus raphanistrum subsp. landra

               395    -    445
UN18339        --> ATCCAGCTGTGACAACGGCCTAGGGACAGGACATGGTCTCCCTTTTCTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD964714       <-- ATCCAGCTGTGACAACGGCCTAGGGACAGGACATGGTCTCCCTTTTCTCT
FD557047       <-- ATCCAACTGTGACAACGGCCTAGGGACAGGACATGGTCTCCCTTTTCTCT
EX904402       <-- ..................................................
EY914076       <-- ..................................................
FD530253       --> ATCCAGCTGTGACAACGGCCTAGGGACAGGACATGGTCTCCCTTTTCTCT
FD960644       --> ATCCAGCTGTGACAACGGCCTAGGGACAGG....................
FD553241       --> ATCCAACTGTGACAACGGCCTAGGGACAGGACATGGTCTCCCTTTTCTCT
EY910193       --> ATCCAACTGTGACAACGGCCTAGGGACAGGACATGGTCTCCCTTTTCTCT
FD554370       --> ATCCAGCTGTGACAACGGCCTAGGGACAGGACATGGTCTCCCTTTTCTCT

               445    -    495
UN18339        --> CTTCCTCTAGGATCTCTCTGATAGGGAAGTAAGCCGCTTTCTTGCAGAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD964714       <-- CTTCCTCTAGGATCTCTCTGATAGGGAAGTAAGCCGCTTTCTTGCAGAGC
FD557047       <-- CTTCCTCTAGAATCTCTCTGATAGGGAAGTAAGCCGCTTTCTTGCAGAGC
EX904402       <-- ..................................................
EY914076       <-- ..................................................
FD530253       --> CTTCCTCTAGGATCTCTCTGATAGGGAAGTAAGCCGCTTTCTTGCAGAGC
FD960644       --> ..................................................
FD553241       --> CTTCCTCTAGAATCTCTCTGATAGGGAAGTAAGCCGCTTTCTTGCAGAGC
EY910193       --> CTTC-TCTAGAATCTCTCTGATAGGGAAGTAAGCCGCTTTCTTGCAGAGC
FD554370       --> CTTCCTCTAGGATCTCTCTGATAGGTAAGTAAGCCGCTTTCTTGCAGAGC

               495    -    545
UN18339        --> TCGAAGATGTCTGATCCGGTGTAGCCTTCACATAAACGAGCTACGTGGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD964714       <-- TCAAAGATGTCTGATCCCGTGTAGCCTTCGCATAAACGAGCTACGTGGTC
FD557047       <-- TCGAAGATGTCTGATCCGGTGTAGCCTTCACATAAACGAGCTACGTGGTC
EX904402       <-- ..................................................
EY914076       <-- ..................................................
FD530253       --> TCAAAGATGTCTGATCCCGTGTAGCCTTCGCGTAAACGAGCTACGTGGTC
FD960644       --> ..................................................
FD553241       --> TCGAAGATGTCTGATCCGGTGTAGCCTTCACATAAACGAGCTACGTGGTC
EY910193       --> TCGAAAATGTCTGATCCGGTGTAGCCTTCACATAAACGAGCTACGTGGTC
FD554370       --> TCGAAGATGTCTGATCCGGTGTAGCCTTCACATAAACGAGCTACGTGGTC

               545    -    595
UN18339        --> ATAGTCAATATCGGGCTCCACCCTCTCTCCTTTCAGTGTCACTTTCAGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD964714       <-- ATAGTCAATATCGGGCTCCACCCTCTCTCCTTTCAGTGTCACTTTCAG..
FD557047       <-- ATAGTCAATATCGGGCTCCACCCTCTCTCCTTTCAGTGTCACTTTCAGTA
EX904402       <-- ..................................................
EY914076       <-- ..................................................
FD530253       --> ATAGTCAATATCGGGCTCCACCCTCTCTCCTTTCAGTGTCACTTTAAGTA
FD960644       --> ..................................................
FD553241       --> ATAGTCAATATCGGGCTCCACCCTCTCTCCTTTCAGTGTCACTTTCAGTA
EY910193       --> ATAGTCAATATCGGGCTCCACCCTCTCTCCTTTCAGTGTCACTTTCAGTA
FD554370       --> ATAGTCAATATCCGGTTCCACCCTCTCTCCTTTCAGTGTCACTTTTAGTA

               595    -    645
UN18339        --> TCTCTGCTCTCTCCTTGCGATCAGGCATTCCAATCTCAAAGGCTTGAGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD964714       <-- ..................................................
FD557047       <-- TCTCTGCTCTCTCCTTGCGATCAGGCATTCCAATCTCAAAGGCTTGAGGA
EX904402       <-- ..................................................
EY914076       <-- ..................................................
FD530253       --> TCTCTGCTCTCTCCTTGCGATCAGGCATTCCAATCTCAAAGGCTTGAGGA
FD960644       --> ..................................................
FD553241       --> TCTCTGCTCTCTCCTTGCGATCAGGCATTCCAATCTCAAAGGCTTGAGGA
EY910193       --> TCTCTGCTCTCTCCTTGCGATCAGGCATTCCAATCTCAAAGG........
FD554370       --> TCTCTGCTCTCTCCTTGCGATCAGGCATTCCAATCTCAAAGGCTTGAGGA

               645    -    695
UN18339        --> AGACGCCTCAATATCGCTTCATCGAGCTCTGATGGTCTGTTAGTTGCAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD964714       <-- ..................................................
FD557047       <-- AGACGCCTCAATATCGCTTCATCGAGCTCTGATGGTCTGTTAGTTGCAGC
EX904402       <-- ..................................................
EY914076       <-- ..................................................
FD530253       --> AGACGCCTCAATATTGCTTCATCGAGCTCTGATGGTCTGTTAGTTGCAGC
FD960644       --> ..................................................
FD553241       --> AGACGCCTCAATATCGCTTCATCGAG........................
EY910193       --> ..................................................
FD554370       --> AGACGCCTCAATATCGCTTCATCGAGCTCTGATGGTCTGTTAGTTGCAGC

               695    -    745
UN18339        --> AAGAACCATCACCCTCGCATTCGGATCAGTAGAGAAACCATCCCATAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD964714       <-- ..................................................
FD557047       <-- AAGAACCATCACCCTCGCATTCGGATCAGTAGAGAAACCATCCCATAAAG
EX904402       <-- .......ATCACCCTCGCATTCGGACCAGTAGAGAAACCATCCCATAAAG
EY914076       <-- ..........................................CCATAAAG
FD530253       --> AAGAACCATCACCCTCGCATTCGGATCAGTAGAGAAACCATCCCATAAAG
FD960644       --> ..................................................
FD553241       --> ..................................................
EY910193       --> ..................................................
FD554370       --> AAGGACCATCACCCTCGCATTCGGATCAG.....................

               745    -    795
UN18339        --> CCATAAACTCAGTCTTCATGTTTGCCATGGCTTCATGATCTGTAGAACGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD964714       <-- ..................................................
FD557047       <-- CCATAAACTCAGTCTTCATGTTTGCCATGGCTTCATGATCTGTTGAACGG
EX904402       <-- CCATAAACTCAGTCTTCATGTTTGCCATGGCTTCATGATCTGTAGAACGG
EY914076       <-- CCATAAACTCAGTCTTCATGTT-GCCATGGCTTCATGATCTGTAGAACGG
FD530253       --> CCATAAACTCAGTCTTCATGTTTGCCATGGCTTCATGATCTGTAG.....
FD960644       --> ..................................................
FD553241       --> ..................................................
EY910193       --> ..................................................
FD554370       --> ..................................................

               795    -    845
UN18339        --> CGCTGGCCAAGAAAGCTGTCCACCTCATCGATAAAAATGATAGCAGGTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD964714       <-- ..................................................
FD557047       <-- CGCTGGCCAAGAAAGCTATCCACCTCATCGATAAAAATGATAGCAGGTTG
EX904402       <-- CGCTGGCCAAGAAAGCTGTCCACCTCATCGATAAAAATGATAGCAGGTTG
EY914076       <-- CGCTGGCCAAGAAAGCTGTCCAC-TCATCGATAAAAATGATAGCAGGTTG
FD530253       --> ..................................................
FD960644       --> ..................................................
FD553241       --> ..................................................
EY910193       --> ..................................................
FD554370       --> ..................................................

               845    -    895
UN18339        --> GAGTTTGTACGCCAAGCTAAACACAGCAGCAACAAGCTTCTGAGCATCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD964714       <-- ..................................................
FD557047       <-- GAGTTTGTACGCCAAGCTAAACACAGCAGCAACAAGCTTCTGAGC.....
EX904402       <-- GAGTTTGTACGCCAAGCTAAACACAGCAGCAACAAGCTTCTGAGCATCAC
EY914076       <-- GAGTTTGTACGCCAAGCTAAACACAGCAGCAACAAGCTTCTGAGCATCAC
FD530253       --> ..................................................
FD960644       --> ..................................................
FD553241       --> ..................................................
EY910193       --> ..................................................
FD554370       --> ..................................................

               895    -    945
UN18339        --> CAAACCACTTGCTCATCAGATTAGAGACCCTAACATTAATGAAAACAGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD964714       <-- ..................................................
FD557047       <-- ..................................................
EX904402       <-- CAAACCACTTGCTCATCAGATTAGAGACCCTAACATTAATGAAAACAGCT
EY914076       <-- CAAACCACTTGCTCATCAGATTAGAGACCCTAACATTAATGAAAACAGCT
FD530253       --> ..................................................
FD960644       --> ..................................................
FD553241       --> ..................................................
EY910193       --> ..................................................
FD554370       --> ..................................................

               945    -    995
UN18339        --> CCCGATTCTTTAGCAATAGCCTTAGCAAGCATTGTCTTCCCTGTACCAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD964714       <-- ..................................................
FD557047       <-- ..................................................
EX904402       <-- CCCGATTCTTTAGCAATAGCCTTAGCAAGCATTGTCTTCCCTGTACCAGG
EY914076       <-- CCCGATTCTTTAGCAATAGCCTTAGCAAGCATTGTCTTCCCTGTACCAGG
FD530253       --> ..................................................
FD960644       --> ..................................................
FD553241       --> ..................................................
EY910193       --> ..................................................
FD554370       --> ..................................................

               995    -   1045
UN18339        --> AGGCCCATAGAGCAAGACGCCCTTTTGAGGTCCAAGGAGCTTCCCATAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD964714       <-- ..................................................
FD557047       <-- ..................................................
EX904402       <-- AGGCCCATAGAGCAAGACGCCCTTTTGAGGTCCAAGGAGCTTCCCATAAG
EY914076       <-- AGGCCCATAGAGCAAGACGCCCTTTTGAGGTCCAAGGAGCTTCCCATAAG
FD530253       --> ..................................................
FD960644       --> ..................................................
FD553241       --> ..................................................
EY910193       --> ..................................................
FD554370       --> ..................................................

               1045   -   1095
UN18339        --> CAAAAAGCTCAGGCCTTTTCGACGGCAAAATCACAAGCTCATACAAAGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD964714       <-- ..................................................
FD557047       <-- ..................................................
EX904402       <-- CAAAAAGCTCAGGCCTTCTCAACGGCAAAATCACAAGCTCATACAAAGCC
EY914076       <-- CAAAAAGCTCAGGCCTTTTCGACGGCAAAATCACAAGCTCATACAAAGCC
FD530253       --> ..................................................
FD960644       --> ..................................................
FD553241       --> ..................................................
EY910193       --> ..................................................
FD554370       --> ..................................................

               1095   -   1145
UN18339        --> TCCTTGATGGTCTCCAACCCTCCGATAGAACCAAACTCCACATCGATATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD964714       <-- ..................................................
FD557047       <-- ..................................................
EX904402       <-- TCCTTGATGGTCTCCAACCCTCCGATAGAACCAAACTCCACATCGATATG
EY914076       <-- TCCTTGATGGTCTCCAACCCTCCGATAGAACCAAACTCCACATCGATATG
FD530253       --> ..................................................
FD960644       --> ..................................................
FD553241       --> ..................................................
EY910193       --> ..................................................
FD554370       --> ..................................................

               1145   -   1195
UN18339        --> GTCTGGATTAATCACATCACGTGCTATCACATCCTCGTATGGAGTAGTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD964714       <-- ..................................................
FD557047       <-- ..................................................
EX904402       <-- GTCTGGATTAATCACATCACGTGCTATCACATCCTCGTATGGAGTAGTGT
EY914076       <-- GTCTGGATTAATCACATCACATGCTATCACATCCTCGTATGGAGTAGTGT
FD530253       --> ..................................................
FD960644       --> ..................................................
FD553241       --> ..................................................
EY910193       --> ..................................................
FD554370       --> ..................................................

               1195   -   1245
UN18339        --> GAATAAGAGGACGACCTAGACGCTTGGAGATTTCTTTCTTATGCTCGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD964714       <-- ..................................................
FD557047       <-- ..................................................
EX904402       <-- GAATAAGAGGACGACCTAGACGCTTGGAGATTTCTTTCTTATGCTCGAGA
EY914076       <-- GAATAAGAGGACGACCTAGACGCTTGGAGATTTCTTTCTTATGCTCGAGA
FD530253       --> ..................................................
FD960644       --> ..................................................
FD553241       --> ..................................................
EY910193       --> ..................................................
FD554370       --> ..................................................

               1245   -   1295
UN18339        --> GCTTTCTTAGACGCCTCGCGATTAGGGTCGAGGTGTCTGAGCCCGGCAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD964714       <-- ..................................................
FD557047       <-- ..................................................
EX904402       <-- GCTTTCTTAGACGCCTCGCGATTAGGGTCGAGGTGTCTGAGCCCGGCAAA
EY914076       <-- GCTTTCTTAGACGCCTCGCGATTAGGATCGAGGTGTCTGAGCCCGGCAAA
FD530253       --> ..................................................
FD960644       --> ..................................................
FD553241       --> ..................................................
EY910193       --> ..................................................
FD554370       --> ..................................................

               1295   -   1345
UN18339        --> TAGAACCAAGCAGCTGAAAGCAGCGCTCGCCGCGTGGAGTATGAGTTCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD964714       <-- ..................................................
FD557047       <-- ..................................................
EX904402       <-- TAGAACCAAGCAGCTGAAAGCAGCGCTCGCCGCGTGGAGTATGc......
EY914076       <-- TAGAACCAAGCAGCTGAAAGCAGCGCTCGCCGCGTAGAGTATGAGTTCTT
FD530253       --> ..................................................
FD960644       --> ..................................................
FD553241       --> ..................................................
EY910193       --> ..................................................
FD554370       --> ..................................................

               1345   -   1395
UN18339        --> GCAAGATCTTCGTCTCCGACGAGCCACCACCCATTTCTCTTACAAGAAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD964714       <-- ..................................................
FD557047       <-- ..................................................
EX904402       <-- ..................................................
EY914076       <-- GCAAGATCTTCGTCTCCGACGAGCCACCACCCATTTCTCTTACAAGAAAT
FD530253       --> ..................................................
FD960644       --> ..................................................
FD553241       --> ..................................................
EY910193       --> ..................................................
FD554370       --> ..................................................

               1395   -   1445
UN18339        --> TTTTAAAAAAGAACACAACCTAGGATTATATGTTTGCAGAACACGGGGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD964714       <-- ..................................................
FD557047       <-- ..................................................
EX904402       <-- ..................................................
EY914076       <-- TTTTAAAAAAGAACACAACCTAGGATTATATGTTTGCAGAACACGGGGAG
FD530253       --> ..................................................
FD960644       --> ..................................................
FD553241       --> ..................................................
EY910193       --> ..................................................
FD554370       --> ..................................................

               1445   -   1495
UN18339        --> AGACTCTTGCTCTTCTTGTGGACGACGACAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD964714       <-- ................................
FD557047       <-- ................................
EX904402       <-- ................................
EY914076       <-- AGACTCTTGCTCTTCTTGTGGACGACGACAGA
FD530253       --> ................................
FD960644       --> ................................
FD553241       --> ................................
EY910193       --> ................................
FD554370       --> ................................