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Alignment for radish unigene UN18361

               1      -     51
UN18361        --> GGATCCAATATCTCTATAAAAGGAGTTATGAAGTCGATATAGGGTATTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540014       <-- ...............................................gAA
EV540499       <-- ..............................................ggAA
EW729952       <-- ..............................................ggAA
EX777785       <-- ..............................................ggAA
EY901488       <-- ..............................................ggAA
EY918643       <-- ..............................................ggAA
EY895605       <-- ...........................................ggaatac
EY927246       <-- ..................................................
FD976077       <-- ..................................................
FD537173       <-- ..................................................
EV524906       --> GGATCCAATATCTCTATAAAAGGAGTTATGAAGTCGATATAGGGTATTAA
EV535293       --> ...............................................gAA
EV535943       --> ..............................................ggAA
EV552592       --> ..............................................ggAA
EW725301       --> ..............................................ggAA
EX774012       --> ..............................................ggAA
EY899337       --> ..............................................ggAA
EY904934       --> ..............................................ggAA
FD532561       --> ..............................................ggAA
FD540728       --> ..............................................ggAA
FD561600       --> ..............................................ggAA
FD980141       --> ..............................................ggAA
EV526967       --> ..............................................ggac
EY899939       --> ...........................................ggaatac
EX757491       --> ..................................................
EX889341       --> ..................................................
EV567684       --> ..................................................

               51     -    101
UN18361        --> GTCTCACCAGACAATCTAATAGGTGACCTTGAGAAAGAAAACAACGGGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540014       <-- GTCTCACCAGACAATCTAATAGGTGACCTTGAGAAAGAAAACAACGGGAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV540499       <-- GTCTCACCAGACAATCTAATAGGTGACCTTGAGAAAGAAAACAACGGGAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EW729952       <-- GTCTCACCAGACAATCTAATAGGTGACCTTGAGAAAGAAAACAACGGGAT  Raphanus sativus cv Early Scarlet Globe
EX777785       <-- GTCTCACCAGACAATCTAATAGGTGACCTTGAGAGAGAAAACAACGGGAC  Raphanus raphanistrum subsp. landra
EY901488       <-- GTCTCACCAGACAATCTAATAGGTGACCTTGAGAAAGAAAACAACGGGAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY918643       <-- GTCTCAC-AGACAATCTAATAGGTGACCTTGAGAAAGAAAACAACGGGAC  Raphanus raphanistrum subsp. landra
EY895605       <-- GTCTCACCGAACAATC-AATAGGTGACTTTGAGAAAGAAAGCAACGAGAT  Raphanus raphanistrum subsp. maritimus
EY927246       <-- .................AATAGGTGACCTTGAGAAAGAAAACAACGGGAC  Raphanus sativus var. oleiformis
FD976077       <-- .................................AAAGAAAACAACGGGAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD537173       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV524906       --> GTCTCACCAGACAATCTAATAGGTGACCTTGAGAAAGAAAACAACGGGAC  Raphanus raphanistrum subsp. maritimus
EV535293       --> GTCTCACCAGACAATCTAATAGGTGACCTTGAGAAAGAAAACAACGGGAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV535943       --> GTCTCACCAGACAATCTAATAGGTGACCTTGAGAAAGAAAACAACGGGAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV552592       --> GTCTCACCAGACAATCTAATAGGTGACCTTGAGAAAGAAAACAACGGGAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW725301       --> GTCTCACCAGACAATCTAATAGGTGACCTTGAGAAAGAAAACAACGGGAT  Raphanus sativus cv Early Scarlet Globe
EX774012       --> GTCTCACCAGACAATCTAATAGGTGACCTTGAGAGAGAAAACAACGGGAC  Raphanus raphanistrum subsp. landra
EY899337       --> GTCTCACCAGACAATCTAATAGGTGACCTTGAGAAAGAAAACAACGGGAC  Raphanus raphanistrum subsp. maritimus
EY904934       --> GTCTCACCAGACAATCTAATAGGTGACCTTGAGAAAGAAAACAACGGGAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD532561       --> GTCTCACCAGACAATCTAATAGGTGACCTTGAGAAAGAAAACAACGGGAC  Raphanus raphanistrum subsp. maritimus
FD540728       --> GTCTCACCAGACAATCTAATAGGTGACCTTGAGAAAGAAAACAACGGGAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD561600       --> GTCTCACCAGACAATCTAATAGGTGACCTTGAGAAAGAAAACAACGGGAC  Raphanus sativus var. oleiformis
FD980141       --> GTCTCACCAGACAATCTAATAGGTGACCTTGAGAAAGAAAACAACGGGAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV526967       --> GTCTCACCGAACAATC-AATAGGTGACTTTGAGAAAGAAAGCAACGAGAT  Raphanus raphanistrum subsp. maritimus
EY899939       --> GTCTCACCGAACAATC-AATAGGTGACTTTGAGAAAGAAAGCAACGAGAT  Raphanus raphanistrum subsp. maritimus
EX757491       --> ...ggACCAGACAATCTAATAGGTGACCTTGAGAAAGAAAACAACGGGAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX889341       --> ...........................................gCGGGAT  Raphanus sativus var. oleiformis
EV567684       --> ..................................................  Raphanus raphanistrum subsp. landra

               101    -    151
UN18361        --> AAATAATGGTAACGGAGGAAATTGAGGTAGACGTGGAGATCAAATCTCCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540014       <-- AAATAATGGTAACGGAGGAAATTGAGGTAGACGTGGGGATCAAATCTCCG
EV540499       <-- AAATAATGGTAACGGAGGAAATTGAGGTAGACGTGGAGATCAAATCTCCG
EW729952       <-- AAATAATGGTAACGGAGGAAATTGAGGTAGACGTGGAGATCAAATCTCCG
EX777785       <-- AAATAATGGTAACGGAGGAAATTGAGGTAGACGTGGAGATCAAATCTCCG
EY901488       <-- AAATAATGGTAACGGAGGAAATTGAGGTAGACGTGGAGATCAAATCTCCG
EY918643       <-- AAATAATGGTAACGGAGGAAATTGAGGTAGACGTGGAGATCAAATCTCCG
EY895605       <-- AAATAATGGTAACGGAGGAAATTGAGGTAGACGTGGAGATCAAATCTCCG
EY927246       <-- AAATAATGGTAACGGAGGAAATTGAGGTAGACGTGGAGATCAAATCTCCG
FD976077       <-- AAATAATGGTAACGGAGGAAATTGAGGTAGACGTGGAGATCAAATCTCCG
FD537173       <-- ...............................................CCG
EV524906       --> AAATAATGGTAACGGAGGAAATTGAGGTAGACGTGGAGATCAAATCTCCG
EV535293       --> AAATAATGGTAACGGAGGAAATTGAGGTAGACGTGGGGATCAAATCTCCG
EV535943       --> AAATAATGGTAACGGAGGAAATTGAGGTAGACGTGGAGATCAAATCTCCG
EV552592       --> AAATAATGGTAACGGAGGAAATTGAGGTAGACGTGGAGACCAAATCTCCG
EW725301       --> AAATAATGGTAACGGAGGAAATTGAGGTAGACGTGGAGATCAAATCTCCG
EX774012       --> AAATAATGGTAACGGAGGAAATTGAGGTAGACGTGGAGATCAAATCTCCG
EY899337       --> AAATAATGGTAACGGAGGAAATTGAGGTAGACGTGGAGATCAAATCTCCG
EY904934       --> AAATAATGGTAACGGAGGAAATTGAGGTAGACGTGGAGATCAAATCTCCG
FD532561       --> AAATAATGGTAACGGAGGAAATTGAGGTAGACGTGGAGATCAAATCTCCG
FD540728       --> AAATAATGGTAACGGAGGAAATTGAGGTAGACGTGGAGATCAAATCTCCG
FD561600       --> AAATAATGGTAACGGAGGAAATTGAGGTAGACGTGGAGATCAAATCTCCG
FD980141       --> AAATAATGGTAACGGAGGAAATTGAGGTAGACGTGGAGATCAAATCTCCG
EV526967       --> AAATAATGGTAACGGAGGAAATTGAGGTAGACGTGGAGATCAAATCTCCG
EY899939       --> AAATAATGGTAACGGAGGAAATTGAGGTAGACGTGGAGATCAAATCTCCG
EX757491       --> AAATAATGGTAACGGAGGAAATTGAGGTAGACGTGGAGATCAAATCTCCG
EX889341       --> AAATAATGGTAACGGAGGAAATTGAGGTAGACGTGGAGATCAAATCTCCG
EV567684       --> ..................................................

               151    -    201
UN18361        --> GCTAATAAGTTCCACATGTTCGTCGGAAGATTACAACATCTGCCCAAAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540014       <-- GCTAATAAGTTCCACATGTTCGTCGGAAGATTACAACATCTGCCCAAAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV540499       <-- GCTAATAAGTTCCACATGTTCGTCGGAAGATTACAACATCTGCCCAAAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EW729952       <-- GCTAATATGTTCCACATGTTCGTCGGAAGATTACAACATCTGCCCAAAGC  Raphanus sativus cv Early Scarlet Globe
EX777785       <-- GCTAATAAGTTCCACATGTTCATCGGAAGATTACAACATCTGCCCAAAGC  Raphanus raphanistrum subsp. landra
EY901488       <-- GCTAATAAGTTCCACATGTTCGTCGGAAGATTACAACATCTGCCCAAAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY918643       <-- GCTAATAAGTTCCACATGTTCATCGGAAGATTACAACATCTGCCCAAAGC  Raphanus raphanistrum subsp. landra
EY895605       <-- GCTAATAAGTTCCACATGTTCGTTGGAAGATTGCAACATCTGCCCAAAGC  Raphanus raphanistrum subsp. maritimus
EY927246       <-- GCTAATAAGTTCCACATGTTCATCGGAAGATTACAACATCTGCCCAAAGC  Raphanus sativus var. oleiformis
FD976077       <-- GCTAATAAGTTCCACATGTTCGTCGGAAGATTACAACATCTGCCCAAAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD537173       <-- GCTAATAAGTTCCACATGTTCGTCGGAAGATTACAACATCTGCCCAAAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV524906       --> GCTAATAAGTTCCACATGTTCGTTGGAAGATTACAACATCTGCCCAAAGC  Raphanus raphanistrum subsp. maritimus
EV535293       --> GCTAATAAGTTCCACATGTTCGTCGGAAGATTACAACATCTGCCCAAAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV535943       --> GCTAATAAGTTCCACATGTTCGTCGGAAGATTACAACATCTGCCCAAAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV552592       --> GCTAATAAGTTCCACATGTTCGTCGGAAGATTACAACATCTGCCCAAAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW725301       --> GCTAATATGTTCCACATGTTCGTCGGAAGATTACAACATCTGCCCAAAGC  Raphanus sativus cv Early Scarlet Globe
EX774012       --> GCTAATAAGTTCCACATGTTCATCGGAAGATTACAACATCTGCCCAAAGC  Raphanus raphanistrum subsp. landra
EY899337       --> GCTAATAAGTTCCACATGTTCGTTGGAAGATTACAACATCTGCCCAAAGC  Raphanus raphanistrum subsp. maritimus
EY904934       --> GCTAATAAGTTCCACATGTTCGTCGGAAGATTACAACATCTGCCCAAAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD532561       --> GCTAATAAGTTCCACATGTTCGTTGGAAGATTACAACATCTGCCCAAAGC  Raphanus raphanistrum subsp. maritimus
FD540728       --> GCTAATAAGTTCCACATGTTCGTCGGAAGATTACAACATCTGCCCAAAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD561600       --> GCTAATAAGTTCCACATGTTCATCGGAAGATTACAACATCTGCCCAAAGC  Raphanus sativus var. oleiformis
FD980141       --> GCTAATAAGTTCCACATGTTCGTCGGAAGATTACAACATCTGCCCAAAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV526967       --> GCTAATAAGTTCCACATGTTCGTTGGAAGATTACAACATCTGCCCAAAGC  Raphanus raphanistrum subsp. maritimus
EY899939       --> GCTAATAAGTTCCACATGTTCGTTGGAAGATTGCAACATCTGCCCAAAGC  Raphanus raphanistrum subsp. maritimus
EX757491       --> GCTAATAAGTTCCACATGTTCGTCGGAAGATTACAACATCTGCCCAAAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX889341       --> GCTAATATGTTCCACGTGTTCGTCGGAAGATTACAACATCTGCCCAAAGC  Raphanus sativus var. oleiformis
EV567684       --> ..................................................  Raphanus raphanistrum subsp. landra

               201    -    251
UN18361        --> CACTCGCTACATTCAGGGATGTGATTTGCTCGAAGGGGACTGGGGCATGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540014       <-- CACTCGCTACAT--TGGGATGTGATTTGCTCGAAGGGGACTGGGGCATGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV540499       <-- CACTCGCTACATTCAGGGATGTGATTTGCTCGAAGGGGACTGGGGCATGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EW729952       <-- CACTCGCTACATTCAGGGATGTGATTTGCTCGAAGGGGACTGGGGCATGG  Raphanus sativus cv Early Scarlet Globe
EX777785       <-- CACTCGCTATATTCAGGGATGTGATTTGCTCGAAGGGGACTGGGGCATGG  Raphanus raphanistrum subsp. landra
EY901488       <-- CACTCGCTACATTCAGGGATGTGATTTGCTCGAAGGGGACTGGGGCATGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY918643       <-- CACTCGCTATATTCGGGGATGTGATTTGCTCGAAGGGGACTGGGGCATGG  Raphanus raphanistrum subsp. landra
EY895605       <-- CACTAGCTACATTCAGGGATGTGATTTGCTCGAAGGGGACTGGGGCATGG  Raphanus raphanistrum subsp. maritimus
EY927246       <-- CACTCGCTATATTCAGGGATGTGATTTGCTCGAAGGGGACTGGGGCATGG  Raphanus sativus var. oleiformis
FD976077       <-- CACTCGCTATATTCAGGGATGTGATTTGCTCGAAGGGGACTGGGGCGTGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD537173       <-- CACTCGCTACATTCAGGGATGTGATTTGCTCGAAGGGGACTGGGGCATGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV524906       --> CACTAGCTACATTCAGGGATGTGATTTGCTCGAAGGGGACTGGGGCATGG  Raphanus raphanistrum subsp. maritimus
EV535293       --> CACTCGCTACATT--GGGATGTGATTTGCTCGAAGGGGACTGGGGCATGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV535943       --> CACTCGCTACATTCAGGGATGTGATTTGCTCGAAGGGGACTGGGGCATGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV552592       --> CACTCGCTATATTCAGGGATGTGATTTGCTCGAAGGGGACTGGGGCATGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW725301       --> CACTCGCTACATTCAGGGATGTGATTTGCTCGAAGGGGACTGGGGCATGG  Raphanus sativus cv Early Scarlet Globe
EX774012       --> CACTCGCTATATTCAGGGATGTGATTTGCTCGAAGGGGACTGGGGCATGG  Raphanus raphanistrum subsp. landra
EY899337       --> CACTAGCTACATTCAGGGATGTGATTTGCTCGAAGGGGACTGGGGCATGG  Raphanus raphanistrum subsp. maritimus
EY904934       --> CACTCGCTACATTCAGGGATGTGATTTGCTCGAAGGGGACTGGGGCATGG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD532561       --> CACTAGCTACATTCAGGGATGTGATTTGCTCGAAGGGGACTGGGGCATGG  Raphanus raphanistrum subsp. maritimus
FD540728       --> CACTCGCTACATTCAGGGATGTGATTTGCTCGAAGGGGACTGGGGCATGG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD561600       --> CACTCGCTATATTCAGGGATGTGATTTGCTCGAAGGGGACTGGGGCATGG  Raphanus sativus var. oleiformis
FD980141       --> CACTCGCTATATTCAGGGATGTGATTTGCTCGAAGGGGACTGGGGCGTGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV526967       --> CACTAGCTACATTCAGGGATGTGATTTGCTCGAAGGGGACTGGGGCATGG  Raphanus raphanistrum subsp. maritimus
EY899939       --> CACTAGCTACATTCAGGGATGTGATTTGCTCGAAGGGGACTGGGGCATGG  Raphanus raphanistrum subsp. maritimus
EX757491       --> CACTCGCTACATTCAGGGATGTGATTTGCTCGAAGGGGACTGGGGCATGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX889341       --> CACTCGCTACATTCAGGGATGTGATTTGCTCGAAGGGGACTGGGGCATGG  Raphanus sativus var. oleiformis
EV567684       --> ..................................................  Raphanus raphanistrum subsp. landra

               251    -    301
UN18361        --> TTGGAAGCATAGTCTTGTGGAAACTACTTTTTGATGGAGAGGAAATAGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540014       <-- TTGGAAGCATAGTCTTGTGGAAACTACTTTTTGATGGAGAGGAAATAGTG
EV540499       <-- TTGGAAGCATAATCTTGTGGAAACTACTTTTTGATGGAGAGGAAATAGTG
EW729952       <-- TTGGAAGCATAGTCTTGTGGAAACTACTTTTTGATGGAGAGGAAATAGTG
EX777785       <-- TCGGAAGCATAGTCTTGTGGAAACTACTTTTTGATGGAGAGGAAATAGTG
EY901488       <-- TTGGAAGCATAATTTTGTGGAAACTACTTTTTGATGGAGAGGAAATAGTG
EY918643       <-- TTGGAAGCATAGTTTTGTGGAAACTACTTTTTGATGGAGAGGAAATAGTG
EY895605       <-- TTGGAAGCATAGTCTTGTGGAAACTACTTTTTGATGGAGAGGAAATAGTG
EY927246       <-- TTGGAAGCATAGTCTTGTGGAAACTACTTTTTGATGGAGAGGAAATAGTG
FD976077       <-- TTGGAAGCATAGTCTTGTGGAAACTACTTTTTGATGGAGAGGAAATAGTG
FD537173       <-- TTGGAAGCATAGTCTTGTGGAAACTACTCTTTGATGGAGAGGAAATAGTG
EV524906       --> TTGGAAGCATAGTCTTGTGGAAACTACTTTTTGATGGAGAGGAAATAGTG
EV535293       --> TTGGAAGCATAGTCTTGTGGAAACTACTTTTTGATGGAGAGGAAATAGTG
EV535943       --> TTGGAAGCATAATCTTGTGGAAACTACTTTTTGATGGAGAGGAAATAGTG
EV552592       --> TTGGAAGCATAGTCTTGTGGAAACTACTTTTTGATGGAGAGGAAATAGTG
EW725301       --> TTGGAAGCATAGTCTTGTGGAAACTACTTTTTGATGGAGAGGAAATAGTG
EX774012       --> TCGGAAGCATAGTCTTGTGGAAACTACTTTTTGATGGAGAGGAAATAGTG
EY899337       --> TTGGAAGCATAGTCTTGTGGAAACTACTTTTTGATGGAGAGGAAATAGTG
EY904934       --> TTGGAAGCATAATCTTGTGGAAACTACTTTTTGATGGAGAGGAAATAGTG
FD532561       --> TTGGAAGCATAGTCTTGTGGAAACTACTTTTTGATGGAGAGGAAATAGTG
FD540728       --> TTGGAAGCATAGTCTTGTGGAAACTACTCTTTGATGGAGAGGAAATAGTG
FD561600       --> TTGGAAGCATAGTCTTGTGGAAACTACTTTTTGATGGAGAGGAAATAGTG
FD980141       --> TTGGAAGCATAGTCTTGTGGAAACTACTTTTTGATGGAGAGGAAATAGTG
EV526967       --> TTGGAAGCATAGTCTTGTGGAAACTACTTTTTGATGGAGAGGAAATAGTG
EY899939       --> TTGGAAGCATAGTCTTGTGGAAACTACTTTTTGATGGAGAGGAAATAGTG
EX757491       --> TTGGAAGCATAATCTTGTGGAAACTACTTTTTGATGGAGAGGAAATAGTG
EX889341       --> TTGGAAGCATAGTCTTGTGGAAACTACTTTTTGATGGAGAGGAAATAGTG
EV567684       --> ..................................................

               301    -    351
UN18361        --> TCAAAAGATATGATCGAGGCGATGGATTTTGAGAAGAATGTTATTCAGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540014       <-- TCAAAAGATATGATCGAGGCGATGGATTTTGAGAAGAATGTTATTCAGTT
EV540499       <-- TCAAAAGATATGATCGAGGCGATGGATTTTGAGAAGAATGTTATTCAGTT
EW729952       <-- TCAAAAGATATGATCGAGGCGATGGATTTTGAGAAGAATGTTATTCAGTT
EX777785       <-- TCAAAGGATATGATCGAGGCGATGGATTTTGAGAAGAATGTTATTCAGTT
EY901488       <-- TCAAAAGATATGATCGAGGCGATGGATTTTGAGAAGAATGTTATTCAGTT
EY918643       <-- TCAAAAGATATGATCGAGGCGATGGATTTTGAGAAGAATGTTATTCAGTT
EY895605       <-- TCAAAAGATATGATCGAGGCGATGGATTTTGAGAAGAATGTTATTCAGTT
EY927246       <-- TCAAAAGATATGATCGAGGCGATGGATTTTGAGAAGAATGTTATTCAGTT
FD976077       <-- TCAAAAGATATGATTGAGGCGATGGATTTTGAGAAGAATGTTATTCAGTT
FD537173       <-- TCAAAAGATATGATCGAGGCGATGGATTTTGAGAAGAATGTTATTCAGTT
EV524906       --> TCAAAAGATATGATCGAGGCGATGGATTTTGAGAAGAATGTTATTCAGTT
EV535293       --> TCAAAAGATATGATCGAGGCGATGGATTTTGAGAAGAATGTTATTCAGTT
EV535943       --> TCAAAAGATATGATCGAGGCGATGGATTTTGAGAAGAATGTTATTCAGTT
EV552592       --> TCAAAAGATATGATTGAGGCGATGGATTTTGAGAAGAATGTTATTCAGTT
EW725301       --> TCAAAAGATATGATCGAGGCGATGGATTTTGAGAAGAATGTTATTCAGTT
EX774012       --> TCAAAGGATATGATCGAGGCGATGGATTTTGAGAAGAATGTTATTCAGTT
EY899337       --> TCAAAAGATATGATCGAGGCGATGGATTTTGAGAAGAATGTTATTCAGTT
EY904934       --> TCAAAAGATATGATCGAGGCGATGGATTTTGAGAAGAATGTTATTCAGTT
FD532561       --> TCAAAAGATATGATCGAGGCGATGGATTTTGAGAAGAATGTTATTCAGTT
FD540728       --> TCAAAAGATATGATCGAGGCGATGGATTTTGAGAAGAATGTTATTCAGTT
FD561600       --> TCAAAAGATATGATCGAGGCGATGGATTTTGAGAAGAATGTTATTCAGTT
FD980141       --> TCAAAAGATATGATTGAGGCGATGGATTTTGAGAAGAATGTTATTCAGTT
EV526967       --> TCAAAAGATATGATCGAGGCGATGGATTTTGAGAAGAATGTTATCCAGTT
EY899939       --> TCAAAAGATATGATCGAGGCGATGGATTTTGAGAAGAATGTTATTCAGTT
EX757491       --> TCAAAAGATATGATCGAGGCGATGGATTTTGAGAAGAATGTTATTCAGTT
EX889341       --> TCAAAAGATATGATCGAGGCGATGGATTTTGAGAAGAATGTTATTCAGTT
EV567684       --> ..................................................

               351    -    401
UN18361        --> GAGAGTGTTAGAGGGACCTCTTAAGACAGTGTACAACAGCCTCTTGAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540014       <-- GAGAGTGTTAGAGGGACCTCTTAAGACAGTGTACAACAGCCTCTCGAAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV540499       <-- GAGAGTGTTAGAGGGACCTCTTAAGACAGTGTACAACAGCCTCTCGAAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW729952       <-- GAGAGTGTTAGAGGGACCTCTTAAGACAGTGTACAACAGCCTCTTGAAAA  Raphanus sativus cv Early Scarlet Globe
EX777785       <-- GAGAGTGTTAGAGGGACCTCTTAAGACAGTGTACAACAGCCTCTTGAAAA  Raphanus raphanistrum subsp. landra
EY901488       <-- GAGAGTGTTAGAGGGACCTCTTAAGACAGTGTACAACAGCCTCTCGAAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY918643       <-- GAGAGTGTTAGAGGGACCTCTTAAGACAGTGTACAACAGCCTCTTGAAAA  Raphanus raphanistrum subsp. landra
EY895605       <-- GAGAGTGTTAGAGGGACCTCTTAAGACAGTGTACAACAGCCTCTTGAAAA  Raphanus raphanistrum subsp. maritimus
EY927246       <-- GAGAGTGTTAGAGGGACCTCTTAAGACAGTGTACAACAGCCTCTTGAAAA  Raphanus sativus var. oleiformis
FD976077       <-- GAGAGTGTTAGAGGGACCTCTTAAGACAGTGTACAACAGCCTCTTGAAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD537173       <-- GAGAGTGTTAGAGGGACCTCTTAAGACAGTGTACAACAGCCTCTCGAAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV524906       --> GAGAGTGTTAGAGGGACCTCTTAAGACAGTGTACAACAGCCTCTTGAAAA  Raphanus raphanistrum subsp. maritimus
EV535293       --> GAGAGTGTTAGAGGGACCTCTTAAGACAGTGTACAACAGCCTCTCGAAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV535943       --> GAGAGTGTTAGAGGGACCTCTTAAGACAGTGTACAACAGCCTCTCGAAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV552592       --> GAGAGTGTTAGAGGGACCTCTTAAGACAGTGTACAACAGCCTCTTGAAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW725301       --> GAGAGTGTTAGAGGGACCTCTTAAGACAGTGTACAACAGCCTCTTGAAAA  Raphanus sativus cv Early Scarlet Globe
EX774012       --> GAGAGTGTTAGAGGGACCTCTTAAGACAGTGTACAACAGCCTCTTGAAAA  Raphanus raphanistrum subsp. landra
EY899337       --> GAGAGTGTTAGAGGGACCTCTTAAGACAGTGTACAACAGCCTCTTGAAAA  Raphanus raphanistrum subsp. maritimus
EY904934       --> GAGAGTGTTAGAGGGACCTCTTAAGACAGTGTACAACAGCCTCTCGAAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD532561       --> GAGAGTGTTAGAGGGACCTCTTAAGACAGTGTACAACAGCCTCTTGAAAA  Raphanus raphanistrum subsp. maritimus
FD540728       --> GAGAGTGTTAGAGGGACCTCTTAAGACAGTGTACAACAGCCTCTCGAAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD561600       --> GAGAGTGTTAGAGGGACCTCTTAAGACAGTGTACAACAGCCTCTTGAAAA  Raphanus sativus var. oleiformis
FD980141       --> GAGAGTGTTAGAGGGACCTCTTAAGACAGTGTACAACAGCCTCTTGAAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV526967       --> GAGAGTGTTAGAGGGACCTCTTAAGACAGTGTACAACAGCCTCTTGAAAA  Raphanus raphanistrum subsp. maritimus
EY899939       --> GAGAGTGTTAGAGGGACCTCTTAAGACAGTGTACAACAGCCTCTTGAAAA  Raphanus raphanistrum subsp. maritimus
EX757491       --> GAGAGTGTTAGAGGGACCTCTTAAGACAGTGTACAACAGCCTCTCGAAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX889341       --> GAGAGTGTTAGAGGGACCTCTTAAGACAGTGTACAACAGCCTCTTGAAAA  Raphanus sativus var. oleiformis
EV567684       --> ..................................................  Raphanus raphanistrum subsp. landra

               401    -    451
UN18361        --> CGATGAAGGTGAGCCCTAACCATGGAGGACCAGGAAGCACGGTAAAGTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540014       <-- CGATGAAGGTGAGCCCTAACCATGGAGGACCAGGAAGCACGGTAAAGTGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV540499       <-- CGATGAAGGTGAGCCCTAACCATGGAGGACCAGGAAGCACGGTAAAGTGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EW729952       <-- CGATGAAGGTGAGCCCTAACCATGGAGGACCAGGAAGCACGGTAAAGTGG  Raphanus sativus cv Early Scarlet Globe
EX777785       <-- CGATGAAGGTGAGCCCTAACCATGGAGAACCAGGAAGCACGGTAAAGTGG  Raphanus raphanistrum subsp. landra
EY901488       <-- CGATGAAGGTGAGCCCTAACCATGGAGGACCAGGAAGCACGGTAAAGTGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY918643       <-- CGATGAAGGTGAGCCCTAACCATGGAGAACCAGGAAGCACGGTAAAGTGG  Raphanus raphanistrum subsp. landra
EY895605       <-- CGATGAAGGTGAGCCCTAACCATGGAGGACCAGGAAGCACGGTAAAGTGG  Raphanus raphanistrum subsp. maritimus
EY927246       <-- CGATGAAGGTGAGCCCTAACCATGGAGAACCAGGAAGCACGGTAAAGTGG  Raphanus sativus var. oleiformis
FD976077       <-- CGATGAAGGTGAGCCCTAACCATGGAGGACCAGGAAGCACGGTAAAGTGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD537173       <-- CGATGAAGGTGAGCCCTAACCATGGAGGACCAGGAAGCACGGTAAAGTGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV524906       --> CGATGAAGGTGAGCCCTAACCATGGAGGACCAGGAAGCACGGTAAAGTGG  Raphanus raphanistrum subsp. maritimus
EV535293       --> CGATGAAGGTGAGCCCTAACCATGGAGGACCAGGAAGCACGGTAAAGTGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV535943       --> CGATGAAGGTGAGCCCTAACCATGGAGGACCAGGAAGCACGGTAAAGTGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV552592       --> CGATGAAGGTGAGCCCTAACCATGGAGGACCAGGAAGCACGGTAAAGTGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW725301       --> CGATGAAGGTGAGCCCTAACCATGGAGGACCAGGAAGCACGGTAAAGTGG  Raphanus sativus cv Early Scarlet Globe
EX774012       --> CGATGAAGGTGAGCCCTAACCATGGAGAACCAGGAAGCACGGTAAAGTGG  Raphanus raphanistrum subsp. landra
EY899337       --> CGATGAAGGTGAGCCCTAACCATGGAGGACCAGGAAGCACGGTAAAGTGG  Raphanus raphanistrum subsp. maritimus
EY904934       --> CGATGAAGGTGAGCCCTAACCATGGAGGACCAGGAAGCACGGTAAAGTGG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD532561       --> CGATGAAGGTGAGCCCTAACCATGGAGGACCAGGAAGCACGGTAAAGTGG  Raphanus raphanistrum subsp. maritimus
FD540728       --> CGATGAAGGTGAGCCCTAACCATGGAGGACCAGGAAGCACGGTAAAGTGG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD561600       --> CGATGAAGGTGAGCCCTAACCATGGAGAACCAGGAAGCACGGTAAAGTGG  Raphanus sativus var. oleiformis
FD980141       --> CGATGAAGGTGAGCCCTAACCATGGAGGACCAGGAAGCACGGTAAAGTGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV526967       --> CGATGAAGGTGAGCCCTAACCATGGAGGACCAGGAAGCACGGTAAAGTGG  Raphanus raphanistrum subsp. maritimus
EY899939       --> CGATGAAGGTGAGCCCTAACCATGGAGGACCAGGAAGCACGGTAAAGTGG  Raphanus raphanistrum subsp. maritimus
EX757491       --> CGATGAAGGTGAGCCCTAACCATGGAGGACCAGGAAGCACGGTAAAGTGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX889341       --> CGATGAAGGTGAGCCCTAACCATGGAGGACCAGGAAGCACGGTAAAGTGG  Raphanus sativus var. oleiformis
EV567684       --> ......................................gCGGTAAAGTGG  Raphanus raphanistrum subsp. landra

               451    -    501
UN18361        --> AACGTGAAGTACGAGAGGATTGATGAGAACGTTGCTCACCCTGAGAGGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540014       <-- AACGTGAAGTACGAGAGGATTGATGAGAACGTTGCTCACCCTGAGAGGCA
EV540499       <-- AACGTGAAGTATGAGAGGATTGATGAGAACGTTGCTCACCCTGAGAGGCA
EW729952       <-- AACGTGAAGTACGAGAGGATTGATGAGAACGTTGCTCACCCTGAGAGGCA
EX777785       <-- AACGTGAAGTACGAGAGGATCGATGAGAACGTTGCTCACCCTGAGAGGCA
EY901488       <-- AACGTGAAGTATGAGAGGATTGATGAGAACGTTGCTCACCCTGAGAGGCA
EY918643       <-- AACGTGAAGTACGAGAGGATTGATGAGAACGTTGCTCACCCTGAGAGGCA
EY895605       <-- AACGTGAAGTACGAGAGGATTGATGAGAACGTTGCTCACCCTGAGAGGCA
EY927246       <-- AACGTGAAGTACGAGAGGATTGATGAGAACGTTGCTCACCCTGAGAGGCA
FD976077       <-- AACGTGAAGTACGAGAGGATTGATGAGAACGTTGCTCACCCTGAGAGGCA
FD537173       <-- AACGTGAAGTACGAGAGGATTGATGAGAACGTTGCTCACCCTGAGAGGCA
EV524906       --> AACGTGAAGTACGAGAGGATTGATGAGAACGTTGCTCACCCTGAGAGGCA
EV535293       --> AACGTGAAGTACGAGAGGATTGATGAGAACGTTGCTCACCCTGAGAGGCA
EV535943       --> AACGTGAAGTATGAGAGGATTGATGAGAACGTTGCTCACCCTGAGAGGCA
EV552592       --> AACGTGAAGTACGAGAGGATTGATGAGAACGTTGCTCACCCTGAGAGGCA
EW725301       --> AACGTGAAGTACGAGAGGATTGATGAGAACGTTGCTCACCCTGAGAGGCA
EX774012       --> AACGTGAAGTACGAGAGGATCGATGAGAACGTTGCTCACCCTGAGAGGCA
EY899337       --> AACGTGAAGTACGAGAGGATTGATGAGAACGTTGCTCACCCTGAGAGGCA
EY904934       --> AACGTGAAGTATGAGAGGATTGATGAGAACGTTGCTCACCCTGAGAGGCA
FD532561       --> AACGTGAAGTACGAGAGGATTGATGAGAACGTTGCTCACCCTGAGGGGCA
FD540728       --> AACGTGAAGTACGAGAGGATTGATGAGAACGTTGCTCACCCTGAGAGGCA
FD561600       --> AACGTGAAGTACGAGAGGATTGATGAGAACGTTGCTCACCCTGAGAGGCA
FD980141       --> AACGTGAAGTACGAGAGGATTGATGAGAACGTTGCTCACCCTGAGAGGCA
EV526967       --> AACGTGAATTACGAGAGGATTGATGAGAACGTTGCTCACCCTGAGGGGCA
EY899939       --> AACGTGAAGTACGAGAGGATTGATGAGAACGTTGCTCACCCTGAGAGGCA
EX757491       --> AACGTGAAGTATGAGAGGATTGATGAGAACGTTGCTCACCCTGAGAGGCA
EX889341       --> AACGTGAAGTACGAGAGGATTGATGAGAACGTTGCTCACCCTGAGAGGCA
EV567684       --> AACGTGAAGTACGAGAGGATTGATGAGAACGTTGCTCACCCTGAGAGGCA

               501    -    551
UN18361        --> GCTCCAGTTCTTGGTCGAAGTGACTAAACAGGTCGACGGATACCTCTTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540014       <-- GCTCCAGTTCTTGGTCGAAGTAACTAAACAGGTCGACGGACACCTCTTAT
EV540499       <-- GCTCCAGTTCTTGGTCGAAGTGACTAAACAGGTCGACGGATACCTCTTAT
EW729952       <-- GCTCCAGTTCTTGGTCGAAGTGACTAAACAGGTCGACGGATACCTCTTAT
EX777785       <-- GCTCCAGTTCTTGGTCGAAGTGACTAAACAGGTCGACGGATACCTCTTAT
EY901488       <-- GCTCCAGTTTTTGGTCGAAGTGACTAAACAGGTCGACGGATACCTCTTAT
EY918643       <-- GCTCCAGTTCTTGGTCGAAGTGACTAAACAGGTCGACGGATACCTCTTAT
EY895605       <-- GCTCCAGTTCTTGGTCGAAGTGACTAAACAGGTCGACGGATACCTCTTAT
EY927246       <-- GCTCCAGTTCTTGGTCGAAGTGACTAAACAGGTCGACGGATACCTCTTAT
FD976077       <-- GCTCCAGTTCTTGGTCGAAGTGACTAAACAGGTCGACGGATACCTCTTAT
FD537173       <-- GCTCCAGTTCTTGGTCGAAGTAACTAAA......................
EV524906       --> GCTCCAGTTCTTGGTCGAAGTGACTAAACAGGTCGACGGATACCTCTTAT
EV535293       --> GCTCCAGTTCTTGGTCGAAGTAACTAAACAGGTCGACGGACACCTCTTAT
EV535943       --> GCTCCAGTTCTTGGTCGAAGTGACTAAACAGGTCGACGGATACCTCTTAT
EV552592       --> GCTCCAGTTCTTGGTCGAAGTGACTAAACAGGTCGACGGATACCTCTTAT
EW725301       --> GCTCCAGTTCTTGGTCGAAGTGACTAAACAGGTCGACGGATACCTCTTAT
EX774012       --> GCTCCAGTTCTTGGTCGAAGTGACTAAACAGGTCGACGGATACCTCTTAT
EY899337       --> GCTCCAGCTCTTGGTCGAAGTGACTAAACAGGTCGACGGATACCTCTTAT
EY904934       --> GCTCCAGTTCTTGGTCGAAGTGACTAAACAGGTCGACGGATACCTCTTAT
FD532561       --> GCTCCAGTTCTTGGTCGAAGTGACTAAACAGGTCGACGGATACCTCTTAT
FD540728       --> GCTCCAGTTCTTGGTCGAAGTAACTAAACAGGTCGACGGATACCTCTTAT
FD561600       --> GCTCCAGTTCTTGGTCGAAGTGACTAAACAGGTCGACGGATACCTCTTAT
FD980141       --> GCTCCAGTTCTTGGTCGAAGTGACTAAACAGGTCGACGGATACCTCTTAT
EV526967       --> GCTCCAGTTCTTGGTCGAAGTGACTAAACAGGTCGACGGATACCTCTTAT
EY899939       --> GCTCCAGTTCTTGGTCGAAGTGACTAAACAGGTCGACGGATACCTCTTAT
EX757491       --> GCTCCAGTTCTTGGTCGAAGTGACTAAACAGGTCGACGGATACCTCTTAT
EX889341       --> GCTCCAGTTCTTGGTCGAAGTGACTAAACAGGTCGACGGATACCTCTTAT
EV567684       --> GCTCCAGTTCTTGGTCGAAGTGACTAAACAGGTCGACGGATACCTCTTAT

               551    -    601
UN18361        --> CTGAGGAATAAAGCCTCTTCGGGTTGGCAATATCTAAATAATTAATGCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540014       <-- CTGAGGAATAAAGCCTCTTCGGGTTGGCAATTTCTAAATAATTAATGCTT
EV540499       <-- CTGAGGAATAAAGCCTCTTCGGGTTGGCAATATCTAAATAATTAATGCTT
EW729952       <-- CTGAGGAATAAAGCCTCTTCGGGTTGGCAATATCTAAATAATTAATGCTT
EX777785       <-- CTGAGGAATAAAGCCTCTTCGGGTTGGCAATATCTAAATAATTAATGCTT
EY901488       <-- TTGAGGAATAAAGCCTTTTCGGGTTGGCAATATCTAAATAATTAATGCTT
EY918643       <-- TTGAGGAATAAAGCCTCTTCGGGTTGGCAATATCTAAATAATTAATGCTT
EY895605       <-- TTGAGGAATAAAGCCTCTTCGGGTTGGCAATATCTAAATAATTAATGCTT
EY927246       <-- TTGAGGAATAAAGCCTCTTCGGGTTGGCAATATCTAAATAATTAATGCTT
FD976077       <-- CTGAGGAATAAAGCCTCTTCGGGTTGGCAATATCTAAATAATTAATGCTT
FD537173       <-- ..................................................
EV524906       --> CTGAGGAATAAAGCCTCTTCGGGTTGGCAATATCTAAATAATTAATGCTT
EV535293       --> CTGAGGAATAAAGCCTCTTCGGGTTGGCAATTTCTAAATAATTAATGCTT
EV535943       --> CTGAGGAATAAAGCCTCTTCGGGTTGGCAATATCTAAATAATTAATGCTT
EV552592       --> CTGAGGAATAAAGCCTCTTCGGGTTGGCAATATCTAAATAATTAATGCTT
EW725301       --> CTGAGGAATAAAGCCTCTTCGGGTTGGCAATATCTAAATAATTAATGCTT
EX774012       --> CTGAGGAATAAAGCCTCTTCGGGTTGGCAATATCTAAATAATTAATGCTT
EY899337       --> CTGAGGAATAAAGCCTCTTCGGGTTGGCAATATCTAAATAATTAATGCTT
EY904934       --> CTGAGGAATAAAGCCTCTTCGGGTTGGCAATATCTAAATAATTAATGCTT
FD532561       --> CTGAGGAATAAAGCCTCTTCGGGTTGGCAATATCTAAATAATTAATGCTT
FD540728       --> CTGAGGAATAAAGCCTCTTCGGGTTGGCAATTTCTAAATAATTAATGCTT
FD561600       --> CTGAGGAATAAAGCCTCTTCGGGTTGGCAATATCTAAATAATTAATGCTT
FD980141       --> CTGAGGAATAAAGCCTCTTCGGGTTGGCAATATCTAAATAATTAATGCTT
EV526967       --> CTGAGGAATAAAGCCTCTTCGGGTTGGCAATATCTAAATAATTAATGCTT
EY899939       --> CTGAGGAATAAAGCCTCTTCGGGTTGGCAATATCTAAATAATTAATGCTT
EX757491       --> CTGAGGAATAAAGCCTCTTCGGGTTGGCAATATCTAAATAATTAATGCTT
EX889341       --> CTGAGGAATAAAGCCTCTTCGGGTTGGCAATATCTAAATAATTAATGCTT
EV567684       --> CTGAGGAATAAAGCCTCTTCGGGTTGGCAATATCTAAATAATTAATGCTT

               601    -    651
UN18361        --> CACATACAACATGTTTGTGTGGAAGAGTTATTGTTACGTAATAGAGGACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540014       <-- CACATACAACATGTTTGTGTGGAAGAGTTATTGTTAAGTAATAGAGGACT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV540499       <-- CACATACAACATGTTTGTGTGGAAGAGTTATTGTTAAGTAATAGAGGACT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW729952       <-- CACATACAACATGTTTGTGTGGAAGAGTTATTGTTACGTAATAGAGGACT  Raphanus sativus cv Early Scarlet Globe
EX777785       <-- CACATACAACATGTTTGTGTGGAAGAGTTATTGTTACGTAATAGAGGACT  Raphanus raphanistrum subsp. landra
EY901488       <-- CACATACAACATGTTTGTGTGGAAGAGTTATTGTTAAGTAATAGAGGACT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY918643       <-- CACATACAACATGTTTGTGTGGAAGAGTTATTGTTACGTAATAGAGGACT  Raphanus raphanistrum subsp. landra
EY895605       <-- CACATACAACATGTTTGTGTGGAAGAGTTATTGTTACGTAATAGAGGACT  Raphanus raphanistrum subsp. maritimus
EY927246       <-- CACATACAACATGTTTGTGTGGAAGAGTTATTGTTACGTAATAGAGGACT  Raphanus sativus var. oleiformis
FD976077       <-- CACATACAACATGTTTGTGTGGAAGAGTTAT--TTACGTAATAGAGGACT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD537173       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV524906       --> CACATACAACATGTTTGCGTGGAAGAGTTATTGTTAAGTAATAGAGGACT  Raphanus raphanistrum subsp. maritimus
EV535293       --> CACATACAACATGTTTGTGTGGAAGAGTTATTGTTAAGTAATAGAGGACT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV535943       --> CACATACAACATGTTTGTGTGGAAGAGTTATTGTTAAGTAATAGAGGACT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV552592       --> CACATACAACATGTTTGTGTGGAAGAGTTATTGTTACGTAATAGAGGACT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW725301       --> CACATACAACATGTTTGTGTGGAAGAGTTATTGTTACGTAATAGAGGACT  Raphanus sativus cv Early Scarlet Globe
EX774012       --> CACATACAACATGTTTGTGTGGAAGAGTTATTGTTACGTAATAGAGGACT  Raphanus raphanistrum subsp. landra
EY899337       --> CACATACAACATGTTTGTGTGGAAGAGTTATTGTTAAGTAATAGAGGACT  Raphanus raphanistrum subsp. maritimus
EY904934       --> CACATACAACATGTTTGTGTGGAAGAGTTATTGTTAAGTAATAGAGGACT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD532561       --> CACATACAACATGTTTGTGTGGAAGAGTTATTGTTAAGTA..........  Raphanus raphanistrum subsp. maritimus
FD540728       --> CACATACAACATGTTTGTGTGGAAGAGTTATTGTTAAGTAATAGAGGACT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD561600       --> CACATACAACATGTTTGTGTGGAAGAGTTATTGTTACGTAATAGAGGACT  Raphanus sativus var. oleiformis
FD980141       --> CACATACAACATGTTTGTGTGGAAGAGTTATT--TACGTAATAGAGGACT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV526967       --> CACATACAACATGTTTGTGTGGAAGAGTTATTGTTACGTAATAGAGGACT  Raphanus raphanistrum subsp. maritimus
EY899939       --> CACATACAACATGTTTGTGTGGAAGAGTTATTGTTACGTAATAGAGGACT  Raphanus raphanistrum subsp. maritimus
EX757491       --> CACATACAACATGTTTGTGTGGAAGAGTTATTGTTAAGTAATAGAGGACT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX889341       --> CACATACAACATGTTTGTGTGGAAGAGTTATTGTTACGTAATAGAGGACT  Raphanus sativus var. oleiformis
EV567684       --> CACATACAACATGTTTGTGTGGAAGAGTTATTGTTACGTAATAGAGGACT  Raphanus raphanistrum subsp. landra

               651    -    701
UN18361        --> CCTCTTGTGTGTTTGTATGTGTTTCTCAATAATGT--------GACATTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540014       <-- CCTCTTGTGTGTTTGTATGTGTTTCTCAATAATGT--------GACATTT
EV540499       <-- CCTCTTGTGTATTTGTATGCGTTTCTCAATAATGT--------GACATTT
EW729952       <-- CCTCTTGTGTGTTTGTATGTGTTTCTCAATAATGTATTAATGTGACATTT
EX777785       <-- CCTCTTGTGTGTTTGTATGTGTTTCTCAATAATGTattaatgtggc....
EY901488       <-- CCTCTTGTGTATTTGTATGTGTTTCTCAATAATGT--------GACATTT
EY918643       <-- CCTCTTGTGTGTTTGTATGTGTTTCTCAATAATGTattaatgtgacatt.
EY895605       <-- CCTCTTGTGTGTTTGTATGTGTTTCTCAATAATGT--------GACATTT
EY927246       <-- CCTCTTGCGTGTTTGTATGTGTTTCTCAATAATGTattaatgtgacattt
FD976077       <-- CCTCTTGTGTGTTTGTATGTGTTTCTCAATAATGTattaatgtgacattt
FD537173       <-- ..................................................
EV524906       --> CCTCTTGTGTGTTTGTATGTGTTTCTCAATAATGT--------GACATTT
EV535293       --> CCTCTTGTGTGTTTGTATGTGTTTCTCAATAATGT--------GACATTT
EV535943       --> CCTCTTGTGTATTTGTATGCGTTTCTCAATAATGT--------GACATT.
EV552592       --> CCTCTTGTGTGTTTGTATGTGTTTCTCAATAATGTattaatgtgacattt
EW725301       --> CCTCTTGTGTGTTTGTATGTGTTTCTCAATAATGTATTAATGTGACATTT
EX774012       --> CCTCTTGTGTGTTTGTATGTGTTTCTCAATAATGTattaatgtggc....
EY899337       --> CCTCTTGTGTGTTTGTATGTGTTTCTCAATAATGT--------GACATTT
EY904934       --> CCTCTTGTGTATTTGTATGTGTTTCTCAATAATGT--------GACATTT
FD532561       --> ..................................................
FD540728       --> CCTCTTGTGTGTTTGTATGTGTTTCTCAATAATGT--------GACATTT
FD561600       --> CCTCTTGTGTGTTTGTATGTGTTTCTCAATAATGTattaatgtgaca...
FD980141       --> CCTCTTGTGTGTTTGTATGTGTTTCTCAATAATGTattaatgtgacattt
EV526967       --> CCTCTTGTGTGTTTGTATGTGTTTCTCAATAATGT--------GACATTT
EY899939       --> CCTCTTGTGTGTTTGTATGTGTTTCTCAATAATGT--------GACATTT
EX757491       --> CCTCTTGTGTATTTGTATGTGTTTCTCAATAAAGT--------GACATTT
EX889341       --> CCTCTTGTGTGTTTGTATGTGTTTCTCAATAATGTattaatgtgacattt
EV567684       --> CCTCTTGTGTGTTTGTATGTGTTTCTCAATAATGTattaatgtgacattt

               701    -    751
UN18361        --> ATCGGATCTAAAAGAAATATATATATTGTGTGTTTGTATGTGTTTCTCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540014       <-- ATCGGATCT.........................................
EV540499       <-- ATCGAATCTAAAAGCAAAATATATATatatatatatcgtgtgtttgt...
EW729952       <-- ATCGGATCTAAAAGAAATATATATATatatattcatttaggat.......
EX777785       <-- ..................................................
EY901488       <-- ATCG..............................................
EY918643       <-- ..................................................
EY895605       <-- ATCGGAg...........................................
EY927246       <-- atcggatcg.........................................
FD976077       <-- atcgg.............................................
FD537173       <-- ..................................................
EV524906       --> ATCGGATCTAAA-G-AGTATATATATTGTGTGTTTGTATGTGTT-CTC-A
EV535293       --> ATCGGATCT.........................................
EV535943       --> ..................................................
EV552592       --> atcggg............................................
EW725301       --> ATCGGATCTAAAAGAAATATATATATatatattcatttagat........
EX774012       --> ..................................................
EY899337       --> ATCGGATCTAAAAGAAATATATATATTGTGTGTTTGTATGTGTTTCTCAA
EY904934       --> ATCG..............................................
FD532561       --> ..................................................
FD540728       --> ATCGGATCT.........................................
FD561600       --> ..................................................
FD980141       --> atcggaaaaa........................................
EV526967       --> ATCGGA............................................
EY899939       --> ATCGGAg...........................................
EX757491       --> ATCGaa............................................
EX889341       --> atcggatc..........................................
EV567684       --> atcggatct.........................................

               751    -    801
UN18361        --> TAATGTGACATTTATCGGA
                   ~~~~~~~~~~~~~~~~~~~
EV540014       <-- ...................
EV540499       <-- ...................
EW729952       <-- ...................
EX777785       <-- ...................
EY901488       <-- ...................
EY918643       <-- ...................
EY895605       <-- ...................
EY927246       <-- ...................
FD976077       <-- ...................
FD537173       <-- ...................
EV524906       --> T-ATGTGACATTTATCGGA
EV535293       --> ...................
EV535943       --> ...................
EV552592       --> ...................
EW725301       --> ...................
EX774012       --> ...................
EY899337       --> TAATGTGACATTTATCGG.
EY904934       --> ...................
FD532561       --> ...................
FD540728       --> ...................
FD561600       --> ...................
FD980141       --> ...................
EV526967       --> ...................
EY899939       --> ...................
EX757491       --> ...................
EX889341       --> ...................
EV567684       --> ...................