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Alignment for radish unigene UN18519

               1      -     51
UN18519        --> GGGTAGCTGTCTTCTTTGCATTCCCCATCTTCTCTCCTTATTTCTCTCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY920968       <-- ..................................................
EX774420       <-- ..................................................
EX758464       <-- ..................................................
EY925507       --> GGGTAGCTGTCTTCTTTGCATTCCCCATCTTCTCTCCTTATTTCTCTCCC
FD973076       --> ..................................................
EX770172       --> ..................................................
EV536750       --> ..................................................
EX754056       --> ..................................................

               51     -    101
UN18519        --> CCACTCCTAAAACTTAGATTTACATTTTAATTTATTAACCTTTTTCATTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY920968       <-- ..................................................
EX774420       <-- ..................................................
EX758464       <-- ..................................................
EY925507       --> CCACTCCTAAAACTTAGATTTACATTTTAATTTATTAACCTTTTACATTT
FD973076       --> ........................................TTTTTCATTT
EX770172       --> ..................................................
EV536750       --> ..................................................
EX754056       --> ..................................................

               101    -    151
UN18519        --> ATATATTTTCCTCTCATCTCATATCCCTTCTCTCACCCTCTTTTCTTTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY920968       <-- ..................................................
EX774420       <-- ..................................................
EX758464       <-- ..................................................
EY925507       --> ATATATTTTCCTCTCATCTCATATCCCTTCTCTCACCCTCTTCTCTTTTC
FD973076       --> ATATATTTTCCTCTCATCTCATATCCCTTCTCTCACCCTCTTTTCTTTTC
EX770172       --> ..................................................
EV536750       --> ..................................................
EX754056       --> ..................................................

               151    -    201
UN18519        --> CCTTGATCTTTGGATCAAGAATCAAGTACTATTGTCTTACGTAATCGACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY920968       <-- ..................................................
EX774420       <-- ..................................................
EX758464       <-- ..................................................
EY925507       --> CCTTGATCTTTGGATCAAGAATCAAGTACTATTGTCTCACGTAATCGACA
FD973076       --> CCTTGATCTTTGGATCAAGAATCAAGTACTATTGTCTTACGTAATCGACA
EX770172       --> ..................................................
EV536750       --> ..................................................
EX754056       --> ..................................................

               201    -    251
UN18519        --> TTAGAGCTCATGTGGACCAATTTGGTCCGAAGGATGAACCGGAAACGGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY920968       <-- ..................................................
EX774420       <-- ..................................................
EX758464       <-- ..................................................
EY925507       --> TTAGAGCTCATATGGACCAATTTGGTCCGAAGGATGAACCGGAAACGGTG
FD973076       --> TTAGAGCTCATGTGGACCAATTTGGTCCGAAGGATGAACCAGAAACGGTG
EX770172       --> ..................................................
EV536750       --> ..................................................
EX754056       --> ..................................................

               251    -    301
UN18519        --> TCGTGCGGCAACAGTAGTTGCAATAGCAAGATTGTTCCTGGAGATGGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY920968       <-- ..................................................
EX774420       <-- ..................................................
EX758464       <-- ..................................................
EY925507       --> TCGTGCGGCAACAGTAGTTGCAAGAGCAAGATTGTTCCTGGAGATGGAAG
FD973076       --> TCGTGCGGCAACAGCAGTTGCAATAGCAAGATTGTTCCTGGAGATGGAAG
EX770172       --> ..................................................
EV536750       --> ..................................................
EX754056       --> ..................................................

               301    -    351
UN18519        --> CAGCGGTCCAAAGAAAAGAAATTCGCAGAAGACAAGAAAACGACGAGAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY920968       <-- ..................................................
EX774420       <-- ..................................................
EX758464       <-- ..................................................
EY925507       --> CAGCGGTCCAAAGAAAAGAAAATCGCAGAAGACAAGAAAACGACGAGAAT
FD973076       --> CAGCGGTCCAAAGAAAAGAAATTCGCAGAAGACAAGAAAACGACGAGAAT
EX770172       --> ..................................................
EV536750       --> ..................................................
EX754056       --> ..................................................

               351    -    401
UN18519        --> TGATGTCGTTTAGTGAGCTTCCGGAGTATATGAAGGATAACGAATATATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY920968       <-- ..................................................
EX774420       <-- ..................................................
EX758464       <-- ..................................................
EY925507       --> TGATGTCGTATAGTGAGCTTCCGGAGTATATGAAGGATAACGAATATATA
FD973076       --> TGATGTCGTTTAGTGAGCTTCCGGAGTATATGAAGGATAACGAATATATA
EX770172       --> ..................................................
EV536750       --> ..................................................
EX754056       --> ..................................................

               401    -    451
UN18519        --> TTGAATTACTACAGAGCTGAATGGTCCATTAGAGATGCTTTCTTCAGCGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY920968       <-- ..................................................
EX774420       <-- ..................................................
EX758464       <-- ..................................................
EY925507       --> TTGAATTACTACAGAGCTGAATGGTCCATTAGAGATGCTTTCTTCAGCGT
FD973076       --> TTGAATTACTACAGAGCTGAATGGTCCATTAGAGATGCCTTCTTCAGCGT
EX770172       --> ..................................................
EV536750       --> ..................................................
EX754056       --> ..................................................

               451    -    501
UN18519        --> CTTCAGTTTTCACAATGAGTCCCTCAACGTTTGGACACATTTACTTGGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY920968       <-- ..................................................
EX774420       <-- ..................................................
EX758464       <-- ..................................................
EY925507       --> CTTCAGTTTTCACAATGAGTCCCTCAACGTTTGGACACATTTACTTGGTT
FD973076       --> CTTCAGTTTTCACAATGAGTCCCTCAACGTTTGGACACATTTACTTGGTT
EX770172       --> ..................................................
EV536750       --> ..................................................
EX754056       --> ..................................................

               501    -    551
UN18519        --> TCATTTTATTTGTGGGACTAACCGTCGCCAACATTATGCATCACGATAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY920968       <-- ..................................................
EX774420       <-- ..................................................
EX758464       <-- ..................................................
EY925507       --> TCATTTTATTTGTGGGACTAACCGTCGCCAACATTATGCATCACGATAAA
FD973076       --> TCATTTTATTTGTGGGACTAACCGTCGCCAACATTATGCATCACGATAAA
EX770172       --> ..................................................
EV536750       --> ..................................................
EX754056       --> ..................................................

               551    -    601
UN18519        --> TTCTTCCCCGTGGATGCAAAGAGTCCAGGGAATGTAACAAGATGGCCATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY920968       <-- ..................................................
EX774420       <-- ..................................................
EX758464       <-- ..................................................
EY925507       --> TTCTTCCCCGTGGATGCAAAGAGTCCAGGGAATGTAACAAGATGGCCATT
FD973076       --> TTCTTCCCCGTGGATGCAAAGAGTCCAGGGAATGTAACAAGATGGCCATT
EX770172       --> ..................................................
EV536750       --> ..................................................
EX754056       --> ..................................................

               601    -    651
UN18519        --> TTTCGTTTTCTTAGGAGGCTCAATGTTCTGCCTACTCTCAAGCAGTATTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY920968       <-- ..................................................
EX774420       <-- ..................................................
EX758464       <-- ..................................................
EY925507       --> TTTCGTCTTCTTAGGAGGCTCAATGTTCTGCCTACTCTCAAGCAGTA...
FD973076       --> TTTCGTTTTCTTAGGAGGCTCAATGTTCTGCCTACTCTCAAGCAGTATTT
EX770172       --> ..................................................
EV536750       --> ..................................................
EX754056       --> ..................................................

               651    -    701
UN18519        --> GCCACCTCTTCTGCTGCCACTCCAAAGACCTTAACGTCTTCCTCCTCCGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY920968       <-- ..............TGCCACTCCAAAGACCTTAACGTCTTCCTCCTCCGC
EX774420       <-- ..................................................
EX758464       <-- ..................................................
EY925507       --> ..................................................
FD973076       --> GCCACCTCTTCTGCTGCCACTCAAAAGACCTTAACGTCTTCCTCCTCCGC
EX770172       --> ..................................................
EV536750       --> ..................................................
EX754056       --> ..................................................

               701    -    751
UN18519        --> ATAGACTACGCCGGCATCACCGCCATGATCATCACTTCTTTCTTCCCACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY920968       <-- ATAGACTACGCCGGCATCACCGCCATGATCATCACTTCTTTCTTCCCACC
EX774420       <-- ...................gCGCCATGATCATCACTTCTTTCTTCCCACC
EX758464       <-- ..................................................
EY925507       --> ..................................................
FD973076       --> ATAGACTACGCCGGCATCACCGCCATGATCATCACTTCTTTCTTCCCACC
EX770172       --> ...................gCGCCATGATCATCACTTCTTTCTTCCCACC
EV536750       --> ..............................gTCACTTCTTTCTTCCCACC
EX754056       --> ..................................................

               751    -    801
UN18519        --> AATTTACTACATCTTCCAGTGCACTCCTCGTTGGTACTTCATCTACCTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY920968       <-- AATTTACTACATCTTCCAGTGCACTCCTCGTTGGTACTTCATCTACCTCG
EX774420       <-- AATTTACTACATCTTCCAGTGCACTCCTCGTTGGTACTTCATCTACCTCG
EX758464       <-- ...........gCTTCCAGTGCACTCCTCGTTGGTACTTCATCTACCTCG
EY925507       --> ..................................................
FD973076       --> AATTTACTACATCTTCCAGTGCACTCCTCGTTGGTACTTCATCTACCTCG
EX770172       --> AATTTACTACATCTTCCAGTGCACTCCTCGTTGGTACTTCATCTACCTCG
EV536750       --> AATTTACTACATCTTCCAGTGCACTCCTCGTTGGTACTTCATCTACCTCG
EX754056       --> ...........gCTTCCAGTGCACTCCTCGTTGGTACTTCATCTACCTCG

               801    -    851
UN18519        --> CAGGCATTACCTCTATGGGAATCTTCACCATCATCACACTCTTCACTCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY920968       <-- CAGGCATTACCTCTATGGGAATCTTCACCATCATCACACTCTTCGCTCCA
EX774420       <-- CAGGCATTACCTCTATGGGAATCTTCACCATCATCACACTCTTCACTCCA
EX758464       <-- CAGGCATTACCTCTATGGGAATCTTCACCATCATCACACTCTTCACTCCA
EY925507       --> ..................................................
FD973076       --> CAG-CATTACCTCTATGGGAAT............................
EX770172       --> CAGGCATTACCTCTATGGGAATCTTCACCATCATCACACTCTTCACTCCA
EV536750       --> CAGGCATTACCTCTATGGGAATCTTCACCATCATCACACTCTTCACTCCA
EX754056       --> CAGGCATTACCTCTATGGGAATCTTCACCATCATCACACTCTTCACTCCA

               851    -    901
UN18519        --> TCACTTTCCTCTCCCAAGTACCGAGGTTTTCGAGCTTTGCTCTTTGCCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY920968       <-- TCACTTTCCTCTCCCAAGTACCGAGGTTTTCGAGCTTTGCTCTTTGCCTC
EX774420       <-- TCACTTTCCTCTCCCAAGTACCGAGGTTTTCGAGCTTTGCTCTTTGCCTC
EX758464       <-- TCACTTTCCTCTCCCAAGTACCGAGGTTTTCGAGCTTTGCTCTTTGCCTC
EY925507       --> ..................................................
FD973076       --> ..................................................
EX770172       --> TCACTTTCCTCTCCCAAGTACCGAGGTTTTCGAGCTTTGCTCTTTGCCTC
EV536750       --> TCACTTTCCTCTCCCAAGTACCGAGGTTTTCGAGCTTTGCTCTTTGCCTC
EX754056       --> TCACTTTCCTCTCCCAAGTACCGAGGTTTTCGAGCTTTGCTCTTTGCCTC

               901    -    951
UN18519        --> CATGGGGCTTTTCGGGATCGTGCCTGCTGTCCATGCTATAGTGGTCAACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY920968       <-- CATGGGGCTTTTCGGGATCGTGCC-CTTGTCCATGCTATAGTGGTCAACT
EX774420       <-- CATGGGGCTTTTCGGGATCGTGCCTGCTGTCCATGCTATAGTGGTCAACT
EX758464       <-- CATGGGGCTTTTCGGGATCGTGCCTGCTGTCCACGCTATAGTGGTCAACT
EY925507       --> ..................................................
FD973076       --> ..................................................
EX770172       --> CATGGGGCTTTTCGGGATCGTGCCTGCTGTCCATGCTATAGTGGTCAACT
EV536750       --> CATGGGGCTTTTCGGGATCGTGCCTGCTGTCCATGCTATAGTGGTCAACT
EX754056       --> CATGGGGCTTTTCGGGATCGTGCCTGCTGTCCACGCTATAGTGGTCAACT

               951    -   1001
UN18519        --> GGGAAAACCCGCAAAGGAACGTGACTCTCATGTACGAGCTGGGCATGGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY920968       <-- GGGAAAACCCGCAAAGGAACGTGACGCTCATGTACGAGCTGGGCATGGCA  Raphanus raphanistrum subsp. landra
EX774420       <-- GGGAAAACCCGCAAAGGAACGTGACGCTCATGTACGAGCTGGGCATGGCA  Raphanus raphanistrum subsp. landra
EX758464       <-- GGGAAAACCCGCAAAGGAACGTGACTCTCATGTACGAGCTGGGCATGGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY925507       --> ..................................................  Raphanus raphanistrum subsp. landra
FD973076       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX770172       --> GGGAAAACCCGCAAAGGAACGTGACGCTCATGTACGAGCTGGGCATGGCA  Raphanus raphanistrum subsp. landra
EV536750       --> GGGAAAACCCGCAAAGGAACGTGACTCTCATGTACGAGCTGGGCATGGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX754056       --> GGGAAAACCCGCAAAGGAACGTGACTCTCATGTACGAGCTGGGCATGGCA  Raphanus raphanistrum subsp. raphanistrum (MS)

               1001   -   1051
UN18519        --> GTGTTCTATCTTGTTGGGACAGGTTTTTATGTAGGGAGAGTACCTGAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY920968       <-- GTGTTCTATCTTGTTGGGACAGGTTTTTATGTAGGGAGAGTACCTGAGAG  Raphanus raphanistrum subsp. landra
EX774420       <-- GTGTTCTATCTTGTTGGGACAGGTTTTTATGTAGGGAGAGTACCTGAGAG  Raphanus raphanistrum subsp. landra
EX758464       <-- GTGTTCTATCTTGTTGGGACAGGTTTCTATGTAGGGAGAGTACCTGAGAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY925507       --> ..................................................  Raphanus raphanistrum subsp. landra
FD973076       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX770172       --> GTGTTCTATCTTGTTGGGACAGGTTTTTATGTAGGGAGAGTACCTGAGAG  Raphanus raphanistrum subsp. landra
EV536750       --> GTGTTCTATCTTGTTGGGACAGGTTTCTATGTAGGGAGAGTACCTGAGAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX754056       --> GTGTTCTATCTTGTTGGGACAGGTTTCTATGTAGGGAGAGTACCTGAGAG  Raphanus raphanistrum subsp. raphanistrum (MS)

               1051   -   1101
UN18519        --> GCTTAAGCCTGGATGGTTTGATCGTGTTGGGACATAGTCATCAGATCTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY920968       <-- GCTTAAGCCTGGATGGTTTGATCGTGT-GGGACATAGTCATCAGATTTTC  Raphanus raphanistrum subsp. landra
EX774420       <-- GCTTAAGCCTGGATGGTTTGATCGTGT-GGGACATAGTCATCAGATCTTC  Raphanus raphanistrum subsp. landra
EX758464       <-- GCTTAAGCCTGGATGGTTTGATCGTGTTGGG-CATAGTCATCAGATCTTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY925507       --> ..................................................  Raphanus raphanistrum subsp. landra
FD973076       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX770172       --> GCTTAAGCCTGGATGGTTTGATCGTGT-GGGACATAGTCATCAGATCTTC  Raphanus raphanistrum subsp. landra
EV536750       --> GCTTAAGCCTGGATGGTTTGATCGTGTTGGG-CATAGTCATCAGATCTTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX754056       --> GCTTAAGCCTGGATGGTTTGATCGTGTTGGG-CATAGTCATCAGATCTTC  Raphanus raphanistrum subsp. raphanistrum (MS)

               1101   -   1151
UN18519        --> CATGTGTTCGTTATGTTGGGTGCTTTGTCCCACTATGCAGCTGCTCTTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY920968       <-- CATGTGTTCGTTATGTTGGGTGCTTTGTCCCACTATGCAGCTGCTCTTTT  Raphanus raphanistrum subsp. landra
EX774420       <-- CATGTGTTCGTTATGTTGGGTGCTTTGTCCCACTATGCAGCTGCTCTTTT  Raphanus raphanistrum subsp. landra
EX758464       <-- CATGTGTTCGTTATGTTGGGCGCTTTGTCCCACTATGCAGCTGCTCTTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY925507       --> ..................................................  Raphanus raphanistrum subsp. landra
FD973076       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX770172       --> CATGTGTTCGTTATGTTGGGTGCTTTGTCCCACTATGCAGCTGCTCTTTT  Raphanus raphanistrum subsp. landra
EV536750       --> CATGTGTTCGTTATGTTGGGCGCTTTGTCCCACTATGCAGCTGCTCTTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX754056       --> CATGTGTTCGTTATGTTGGGCGCTTTGTCCCACTATGCAGCTGCTCTTTT  Raphanus raphanistrum subsp. raphanistrum (MS)

               1151   -   1201
UN18519        --> GTTATTGGACTGGCGTGACCATGTTGGTTGTTAACCCATATATATTTTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY920968       <-- GTTATTGGACTGGCGTGACCATGTTGGTTGTTAACCCATATATATTTTCT  Raphanus raphanistrum subsp. landra
EX774420       <-- GTTATTGGACTGGCGTGACCATGTTGGTTGTTAACCCATATATATTTTCT  Raphanus raphanistrum subsp. landra
EX758464       <-- GTTATTGGACTGGCGTGACCATGTTGGTTGTTAACCCATATATATTTTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY925507       --> ..................................................  Raphanus raphanistrum subsp. landra
FD973076       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX770172       --> GTTATTGGACTGGCGTGACCATGTTGGTTGTTAACCCATATATATTTTCT  Raphanus raphanistrum subsp. landra
EV536750       --> GTTATTGGACTGGCGTGACCATGTTGGTTGTTAACCCATATATATTTTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX754056       --> GTTATTGGACTGGCGTGACCATGTTGGTTGTTAACCCATATATATTTTGT  Raphanus raphanistrum subsp. raphanistrum (MS)

               1201   -   1251
UN18519        --> AATTCTTTTGAGTTTTTGTTTTAAATACTAGTGTGTTTGTATCACGTGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY920968       <-- AATTCTTTTGAATTTTTGTTTTAAATACTAGTGTGTTTGTATCACGTGAA  Raphanus raphanistrum subsp. landra
EX774420       <-- AATTCTTTTGAATTTTTGTTTTAAATACTAGTGTGTTTGTATCACGTGAA  Raphanus raphanistrum subsp. landra
EX758464       <-- AATTCTTTTGAGTTTTTGTTTTAAATACTAGTGTGTTTGTATCACGTGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY925507       --> ..................................................  Raphanus raphanistrum subsp. landra
FD973076       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX770172       --> AATTCTTTTGAATTTTTGTTTTAAATACTAGTGTGTTTGTATCACGTGAA  Raphanus raphanistrum subsp. landra
EV536750       --> AATTCTTTTGAGTTTTTGTTTTAAATACTAGTGTGTTTGTATCACGTGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX754056       --> AATTCTTTTGAGTTTTTGTTTTAAATACTAGTGTGTTTGTATCACGTGAA  Raphanus raphanistrum subsp. raphanistrum (MS)

               1251   -   1301
UN18519        --> GCCAAATTGTAATGACTCGTTCGTTGTTAAACTGAATTGTATTTTTTTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY920968       <-- GCCAAATTGTAATGACTCATCCGTTGTTAAACTGAATTGTATTTTTTTT.  Raphanus raphanistrum subsp. landra
EX774420       <-- GCCAAATTGTAATGACTCATCCGTTGTTAAACTGAATTGTATTTTTTTTA  Raphanus raphanistrum subsp. landra
EX758464       <-- GCCAAATTGTAATGACTCGTTCGTTGTTAAACTGAATTGTATTTTTTTcg  Raphanus raphanistrum subsp. raphanistrum (MS)
EY925507       --> ..................................................  Raphanus raphanistrum subsp. landra
FD973076       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX770172       --> GCCAAATTGTAATGACTCATCCGTTGTTAAACTGAATTGTATTTTTTTTA  Raphanus raphanistrum subsp. landra
EV536750       --> GCCAAATTGTAATGACTCGTTCGTTGTTAAACTGAATTGTATTTTTTTct  Raphanus raphanistrum subsp. raphanistrum (MS)
EX754056       --> GCCAAATTGTAATGACTCGTTCGTTGTTAAACTGAATTGTATTTTTTTcg  Raphanus raphanistrum subsp. raphanistrum (MS)

               1301   -   1351
UN18519        --> ATAACAGCTGTGTAACC
                   ~~~~~~~~~~~~~~~~~
EY920968       <-- .................
EX774420       <-- ATAACAGCTGTGTAACC
EX758464       <-- .................
EY925507       --> .................
FD973076       --> .................
EX770172       --> ATAACAGCTGTGTAACC
EV536750       --> .................
EX754056       --> .................