RadishBase

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Alignment for radish unigene UN18521

               1      -     51
UN18521        --> GGGGTTTTGTCCCATCTTTCTTTATTATCCTCTCAATGGCGGATAACACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY910491       <-- ..................................................
EW729581       <-- ..................................................
FD984973       <-- ..................................................
EY917650       <-- ..................................................
EX775446       <-- ..................................................
EY918183       <-- ..................................................
FD554833       <-- ..................................................
FD559059       --> GGGGTTTTGTCCCATCTTTCTTTATTATCCTCTCAATGGCGGATAACACG
EW726904       --> ..................................................
EX771405       --> ..................................................
EY933202       --> ..................................................
EY946506       --> ..................................................
EY914450       --> ..................................................
EY921520       --> ..................................................
FD980400       --> ..................................................
FD989155       --> ..................................................
EY922169       --> ..................................................
EW725672       --> ..................................................
EY925545       --> ..................................................
FD986475       --> ..................................................

               51     -    101
UN18521        --> AGAGGGGTCCAAATCCAAAGGCTTGTGTTCACTGCCCCTCTCTAGCGTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY910491       <-- ..................................................
EW729581       <-- ..................................................
FD984973       <-- ..................................................
EY917650       <-- ..................................................
EX775446       <-- ..................................................
EY918183       <-- ..................................................
FD554833       <-- ..................................................
FD559059       --> AGAGCTGTCCAAATCCAAAGGCTTGTGTTCACTGCCCCTCTCTAGCGTTT
EW726904       --> ....GGGTCCAAATCCAAAGGCTTGTGTTCACTGCCCCTCTCTAGCGTTT
EX771405       --> ....GGGTCCAAATCCAAAGGCTTGTGTTCACTGCCCCTCTCTAGCGTTT
EY933202       --> ....GGGTCCAAATCCAAAGGCTTGTGTTCACTGCCCCTCTCTAGCGTTT
EY946506       --> .....GGTCCAAATCCAAAGGCTTGTGTTCACTGCCCCTCTCTAGCGTTT
EY914450       --> .gggctGTCCAAATCCAAAGGCTTGTGTTCACTGCCCCTCTCTAGCGTTT
EY921520       --> ........ggAAATCCAAAGGCTTGTGTTCACTGCCCCTCTCTAGCGTTT
FD980400       --> ..................................................
FD989155       --> ..................................................
EY922169       --> ..................................................
EW725672       --> ..................................................
EY925545       --> ..................................................
FD986475       --> ..................................................

               101    -    151
UN18521        --> TCCTCATTCTTTCTTGTTCTTTTGCTTCGGATTCAAGTCAGATAATATGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY910491       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW729581       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD984973       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY917650       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX775446       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY918183       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD554833       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD559059       --> TCCTCATTCTTTCTTGTTCTTTTGCTTCGGATTCAAGTAAGATAATATGG  Raphanus raphanistrum subsp. landra
EW726904       --> TCCTCATTCTTTCTTGTTCTTTTGCTTCGGATTCAAGTCAGATAATATGG  Raphanus sativus cv Early Scarlet Globe
EX771405       --> TCCTCATTCTTTCTTGTTCTTTTGCTTCGGATTCAAGTAAGATAATATGG  Raphanus raphanistrum subsp. landra
EY933202       --> TCCTCATTCTTTCTTGTTCTTTTGCTTCGGATTCAAGTCAGATAATATGG  Raphanus sativus var. oleiformis
EY946506       --> TCCTCATTCTTTCTTGTTCTTTTGCTTCGGATTCAAGTCAGATAATATGG  Raphanus sativus cv Rat-Tail Radish #3870
EY914450       --> TCCTCATTCTTTCTTGTTCTTTTGCTTCGGATTCAAGTCAGATAATATGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY921520       --> TCCTCATTCTTTCTTGTTCTTTTGCTTCGGATTCAAGTAAGATAATATGG  Raphanus raphanistrum subsp. landra
FD980400       --> ...ggATTCTTTCTTGTTCTTTTGCTTCGGATTCAAGTCAGATAATATGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD989155       --> ...ggATTCTTTCTTGTTCTTTTGCTTCGGATTCAAGTAAGATAATATGG  Raphanus raphanistrum subsp. landra
EY922169       --> ........................ggggGGATTCAAGTAAGATAATATGG  Raphanus raphanistrum subsp. landra
EW725672       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY925545       --> ..................................................  Raphanus raphanistrum subsp. landra
FD986475       --> ..................................................  Raphanus raphanistrum subsp. landra

               151    -    201
UN18521        --> TGGTTGCTGCTATGGCCTCTGCTTCTGGTTCTGCTCCTTGTTTCACTGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY910491       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW729581       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD984973       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY917650       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX775446       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY918183       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD554833       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD559059       --> TGGTTGCTGCTATAGCCTCTGCTTCTGGTTCTGCTCCTTGCTTCACTGAT  Raphanus raphanistrum subsp. landra
EW726904       --> TGGCTGCTGCTATGGCCTCTGCTTCTGGTTCTGCTCCTTGTTTCACTGAT  Raphanus sativus cv Early Scarlet Globe
EX771405       --> TGGTTGCTGCTATAGCCTCTGCTTCTGGTTCTGCTCCTTGTTTCACTGAT  Raphanus raphanistrum subsp. landra
EY933202       --> TGGCTGCTGCTATGGCCTCTGCTTCTGGTTCTGCTCCTTGTTTCACTGAT  Raphanus sativus var. oleiformis
EY946506       --> TGGCTGCTGCTATGGCCTCTGCTTCTGGTTCTGCTCCTTGTTTCACTGAT  Raphanus sativus cv Rat-Tail Radish #3870
EY914450       --> TGGCTGCTGCTATGGCCTCTGCTTCTGGTTCTGCTCCTTGTTTCACTGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY921520       --> TGGTTGCTGCTATAGCCTCTGCTTCTGGTTCTGCTCCTTGTTTCACTGAT  Raphanus raphanistrum subsp. landra
FD980400       --> TGGCTGCTGCTATGGCCTCTGCTTCTGGTTCTGCTCCTTGTTTCACTGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD989155       --> TGGTTGCTGCTATAGCCTCTGCTTCTGGTTCTGCTCCTTGTTTCACTGAT  Raphanus raphanistrum subsp. landra
EY922169       --> TGGTTGCTGCTATAGCCTCTGCTTCTGGTTCTGCTCCTTGTTTCACTGAT  Raphanus raphanistrum subsp. landra
EW725672       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY925545       --> ..................................................  Raphanus raphanistrum subsp. landra
FD986475       --> ..................................................  Raphanus raphanistrum subsp. landra

               201    -    251
UN18521        --> GCTCGCGTTATCAGACACGATGCTGGAGCTTTCTGTCTTGCTCCTAGGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY910491       <-- ..................................................
EW729581       <-- ..................................................
FD984973       <-- ..................................................
EY917650       <-- ..................................................
EX775446       <-- ..................................................
EY918183       <-- ..................................................
FD554833       <-- ..................................................
FD559059       --> GCTCGCGTTATCAGACACGATGCTGGAGCTTTCTGTCTTGCTCCTAGGAC
EW726904       --> GCTCGCGTTATCAGACAAGATGCTGGAGCTTTCTGTCTTGCTCCTAGGAC
EX771405       --> GCTCGCGTTATCAGACACGATGCTGGAGCTTTCTGTCTTGCTCCTAGGAC
EY933202       --> GCTCGCGTTATCAGACACGATGCTGGAGCTTTCTGTCTTGCTCCTAGGAC
EY946506       --> GCTCGCGTTATCAGACACGATGCTGGAGCTTTCTGTCTTGCTCCTAGGAC
EY914450       --> GCTCGCGTTATCAGACACGATGCTGGAGCTTTCTGTCTTGCTCCTAGGAC
EY921520       --> GCTCGCGTTATCAGACACGATGCTGGAGCTTTCTGTCTTGCTCCTAGGAC
FD980400       --> GCTCGCGTTATCAGACACGATGCTGGAGCTTTCTGTCTTGCTCCTAGGAC
FD989155       --> GCTCGCGTTATCAGACACGATGCTGGAGCTTTCTGTCTTGCTCCTAGGAC
EY922169       --> GCTCGCGTTATCAGACACGATGCTGGAGCTTTCTGTCTTGCTCCTAGGAC
EW725672       --> ..................................................
EY925545       --> ..................................................
FD986475       --> ..................................................

               251    -    301
UN18521        --> AGTCACGTTCGGTGGATTCGTCGATAAATCTATTACCAATCTCAACAGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY910491       <-- ...............ATTCGTCGATAAATCTATTACCAATCTCAACAGAC
EW729581       <-- ..................................................
FD984973       <-- ..................................................
EY917650       <-- ..................................................
EX775446       <-- ..................................................
EY918183       <-- ..................................................
FD554833       <-- ..................................................
FD559059       --> AGTCACGTTCGGTGGATTCGTCGATAAATCTATTACCAATCTCAACAGAC
EW726904       --> AGTCACGTTCGGTGGATTCGTCGATAAATCTATTACCAATCTCAACAGAC
EX771405       --> AGTCACGTTCGGTGGATTCGTCGATAAATCTATTACCAATCCCAACAGAC
EY933202       --> AGTCACGTTCGGTGGATTCGTCGATAAATCTATTACCAATCTCAACAGAC
EY946506       --> AGTCACGTTCGGTGGATTCGTCGATAAATCTATTACCAATCTCAACAGAC
EY914450       --> AGTCACGTTCGGTGGATTCGTCGATAAATCTATTACCAATCTCAACAGAC
EY921520       --> AGTCACGTTCGGTGGATTCGTCGATAAATCTATTACCAATCTCAACAGAC
FD980400       --> AGTCACGTTCGGTGGATTCGTCGATAAATCTATTACCAATCTCAACAGAC
FD989155       --> AGTCACGTTCGGTGGATTCGTCGATAAATCTATTACCAATCTCAACAGAC
EY922169       --> AGTCACGTTCGGTGGATTCGTCGATAAATCTATTACCAATCTCAACAGAC
EW725672       --> ..................................................
EY925545       --> ..................................................
FD986475       --> ..................................................

               301    -    351
UN18521        --> TAAGGTTATCTGGTTTGAAGACTAAAGCATCAAATGCTACTGCTGTTGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY910491       <-- TAAGGTTATCTGTTTTGAAGACTAAAGCATCAAATGCTACTGCTGTTGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW729581       <-- ..AGGTTATCTGGTTTGAAGACTAAAGCATCAAATGCTACTGCTGTTGAG  Raphanus sativus cv Early Scarlet Globe
FD984973       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY917650       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX775446       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY918183       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD554833       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD559059       --> TACGGTTATCTGGTTTGAAGACTAAAGCATCAAATGCTACTGCTGTTGAG  Raphanus raphanistrum subsp. landra
EW726904       --> TAAGGTTATCTGGTTTGAAGACTAAAGCATCAAATGCTACTGCTGTTGAG  Raphanus sativus cv Early Scarlet Globe
EX771405       --> TACGGTTATCTGGTTTGAAGACTAAAGCATCAAATGCTACTGCTGTTGAG  Raphanus raphanistrum subsp. landra
EY933202       --> TAAGGTTATCTGGTTTGAAGACTAAAGCATCAAATGCTACTGCTGTTGAG  Raphanus sativus var. oleiformis
EY946506       --> TAAGGTTATCTGGTTTGAAGACTAAAGCATCAAATGCTACTGCTGTTGAG  Raphanus sativus cv Rat-Tail Radish #3870
EY914450       --> TAAGGTTATCTGTTTTGAAGACTAAAGCATCAAATGCTACTGCTGTTGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY921520       --> TACGGTTATCTGGTTTGAAGACTAAAGCATCAAATGCTACTGCTGTTGAG  Raphanus raphanistrum subsp. landra
FD980400       --> TAAGGTTATCTGGTTTGAAGACTAAAGCATCAAATGCTACTGCTGTTGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD989155       --> TACGGTTATCTGGTTTGAAGACTAAAGCATCAAATGCTACTGCTGTTGAG  Raphanus raphanistrum subsp. landra
EY922169       --> TACGGTTATCTGGTTTGAAGACTAAAGCATCAAATGCTACTGCTGTTGAG  Raphanus raphanistrum subsp. landra
EW725672       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY925545       --> ..................................................  Raphanus raphanistrum subsp. landra
FD986475       --> ..................................................  Raphanus raphanistrum subsp. landra

               351    -    401
UN18521        --> AATGCAAATGCGGCTGATTCTGACAAAGTTCCAACACCAGTGGTCATAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY910491       <-- AATGCAAATGCTGCTGATTCTGACAAAGTTCCAACACCAGTGGTCATAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW729581       <-- AATGCAAATGCGGCTGATTCTGACAAAGTTCCAACACCAGTGGTCATAAT  Raphanus sativus cv Early Scarlet Globe
FD984973       <-- .................TTCTGACAAAGTTCCAACACCAGTGGTCATAAT  Raphanus raphanistrum subsp. landra
EY917650       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX775446       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY918183       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD554833       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD559059       --> AATGCAAATGCGGCTGATTCTGACAAAGTTCCAACACCAGTGGTCATAAT  Raphanus raphanistrum subsp. landra
EW726904       --> AATGCAAATGCGGCTGATTCTGACAAAGTTCCAACACCAGTGGTCATAAT  Raphanus sativus cv Early Scarlet Globe
EX771405       --> AATGCAAATGCGGCTGATTCTGACAAAGTTCCAACACCAGTGGTCATAAT  Raphanus raphanistrum subsp. landra
EY933202       --> AATGCAAATGCGGCTGATTCTGGCAAAGTTCCAACACCAGTGGTCATAAT  Raphanus sativus var. oleiformis
EY946506       --> AATGCAAATGCTGCTGATTCTGACAAAGTTCCAACACCAGTGGTCATAAT  Raphanus sativus cv Rat-Tail Radish #3870
EY914450       --> AATGCAAATGCTGCTGATTCTGACAAAGTTCCAACACCAGTGGTCATAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY921520       --> AATGCAAATGCGGCTGATTCTGACAAAGTTCCAACACCAGTGGTCATAAT  Raphanus raphanistrum subsp. landra
FD980400       --> AATGCAAATGCTGCTGATTCTGACAAAGTTCCAACACCAGTGGTCATAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD989155       --> AATGCAAATGCGGCTGATTCTGACAAAGTTCCAACACCAGTGGTCATAAT  Raphanus raphanistrum subsp. landra
EY922169       --> AATGCAAATGCGGCTGATTCTGACAAAGTTCCAACACCAGTGGTCATAAT  Raphanus raphanistrum subsp. landra
EW725672       --> .................................................g  Raphanus sativus cv Early Scarlet Globe
EY925545       --> ..................................................  Raphanus raphanistrum subsp. landra
FD986475       --> ..................................................  Raphanus raphanistrum subsp. landra

               401    -    451
UN18521        --> CGACCAAGATTCTGACGCTGATGCCACCCTCGTTGAAGTTACATTCGGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY910491       <-- CGACCAAGATTCTGACGCTGATGCCACCGTCGTTGAAGTTACATTCGGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW729581       <-- CGACCAAGATTCTGACGCTGATGCCACCCTCGTTGAAGTTACATTCGGAG  Raphanus sativus cv Early Scarlet Globe
FD984973       <-- CGACCAAGATTCTGACGCTGATGCCACCCTCGTTGAAGTTACATTCGGAG  Raphanus raphanistrum subsp. landra
EY917650       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX775446       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY918183       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD554833       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD559059       --> CGACCAAGATTCTGACGCTGATGCCACCCTCGTTGAAGTTACATTCGGAG  Raphanus raphanistrum subsp. landra
EW726904       --> CGACCAAGATTCTGACGCTGATGCCACCCTCGTTGAAGTTACATTCGGAG  Raphanus sativus cv Early Scarlet Globe
EX771405       --> CGACCAAGATTCTGACGCTGATGCCACCCTCGTTGAAGTTACATTCGGAG  Raphanus raphanistrum subsp. landra
EY933202       --> CGACCAAGATTCTGACGCTGATGCCACCCTCGTTGAAGTTACATTCGGAG  Raphanus sativus var. oleiformis
EY946506       --> CGACCAAGATTCTGGCGCTGATGCCACCGTCGTTGAAGTTACATTCGGAG  Raphanus sativus cv Rat-Tail Radish #3870
EY914450       --> CGACCAAGATTCTGACGCTGATGCCACCGTCGTTGAAGTTACATTCGGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY921520       --> CGACCAAGATTCTGACGCTGATGCCACCCTCGTTGAAGTTACATTCGGA-  Raphanus raphanistrum subsp. landra
FD980400       --> CGACCAAGATTCTGACGCCGATGCCACCGTCGTTGAAGTTACATTCGGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD989155       --> CGACCAAGATTCTGACGCTGATGCCACCCTCGTTGAAGTTACATTCGGAG  Raphanus raphanistrum subsp. landra
EY922169       --> CGACCAAGATTCTGACGCTGATGCCACCCTCGTTGAAGTTACATTCGGAG  Raphanus raphanistrum subsp. landra
EW725672       --> CGACCAAGATTCTGACGCTGATGCCACCCTCGTTGAAGTTACATTCGGAG  Raphanus sativus cv Early Scarlet Globe
EY925545       --> ..................................................  Raphanus raphanistrum subsp. landra
FD986475       --> ..................................................  Raphanus raphanistrum subsp. landra

               451    -    501
UN18521        --> ACCGTCTTGGAGCTCTACTTGACACTATGAATGCGCTCAAGAACTTGGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY910491       <-- ACCGTCTTGGAGCTCTACTTGACACTATGAATGCGCTCAAGAACTTGGGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW729581       <-- ACCGTCTTGGAGCTCTACTTGACACTATGAATGCGCTCAAGAACTTGGGT  Raphanus sativus cv Early Scarlet Globe
FD984973       <-- ACCGTCTTGGAGCTCTACTTGACACTATGAATGCGCTCAAGAACTTGGGG  Raphanus raphanistrum subsp. landra
EY917650       <-- .......................ACTATGAATGCGCTCAAGAACTTGGGG  Raphanus raphanistrum subsp. landra
EX775446       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY918183       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD554833       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD559059       --> ACCGTCTTGGAGCTCTACTTGACACTATGAATGCGCTCAAGAACTTGGGG  Raphanus raphanistrum subsp. landra
EW726904       --> ACCGTCTTGGAGCTCTACTTGACACTATGAATGCGCTCAAGAACTTGGGT  Raphanus sativus cv Early Scarlet Globe
EX771405       --> ACCGTCTTGGAGCTCTACTTGACACTATGAATGCGCTCAAGAACTTGGGG  Raphanus raphanistrum subsp. landra
EY933202       --> ACCGTCTTGGAGCTCTACTTGACACTATGAATGCGCTCAAGAACTTGGGT  Raphanus sativus var. oleiformis
EY946506       --> ACCGTCTTGGAGCTCTACTTGACACTATGAATGCGCTCAAGAACTTGGGT  Raphanus sativus cv Rat-Tail Radish #3870
EY914450       --> ACCGTCTTGGAGCTCTACTTGACACTATGAATGCGCTCAAGAACTTGGGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY921520       --> -CCGTCTTGGAGCTCTACTTGACACTATGAATGCGCTCAAGAACTTGGGG  Raphanus raphanistrum subsp. landra
FD980400       --> ACCGTCTTGGAGCTCTACTTGACACTATGAATGCGCTCAAGAACTTGGGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD989155       --> ACCGTCTTGGAGCTCTACTTGACACTATGAATGCGCTCAAGAACTTGGGG  Raphanus raphanistrum subsp. landra
EY922169       --> ACCGTCTTGGAGCTCTACTTGACACTATGAATGCGCTCAAGAACTTGGGG  Raphanus raphanistrum subsp. landra
EW725672       --> ACCGTCTTGGAGCTCTACTTGACACTATGAATGCGCTCAAGAACTTGGGT  Raphanus sativus cv Early Scarlet Globe
EY925545       --> ....gCTTGGAGCTCTACTTGACACTATGAATGCGCTCAAGAACTTGGGG  Raphanus raphanistrum subsp. landra
FD986475       --> ..................................................  Raphanus raphanistrum subsp. landra

               501    -    551
UN18521        --> TTGAATGTCGTCAAGGCTAATGTCTACCTAGACTCTTCCGGCAAGCACAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY910491       <-- TTGAATGTCGTCAAGGCTAATGTCTACCTAGACTCTTCCGGCAAGCACAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW729581       <-- TTGAATGTCGTCAAGGCTAATGTCTACCTAGACTCTTCCGGCAAGCACAA  Raphanus sativus cv Early Scarlet Globe
FD984973       <-- CTGAATGTCGTCAAGGCTAATGTCTACCTAGACTCTTCCGGCAAGCACAA  Raphanus raphanistrum subsp. landra
EY917650       <-- CTGAATGTCGTCAAGGCTAATGTCTACCTAGACTCTTCCGGCAAGCACAA  Raphanus raphanistrum subsp. landra
EX775446       <-- ..................................CTTCCGGCAAGCACAA  Raphanus raphanistrum subsp. landra
EY918183       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD554833       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD559059       --> CTGAATGTCGTCAAGGCTAATGTCTACCTAGACTCTTCCGGCAAGCACAA  Raphanus raphanistrum subsp. landra
EW726904       --> TTGAATGTCGTCAAGGCTAATGTCTACCTAGACTCTTCCGGCAAGCACAA  Raphanus sativus cv Early Scarlet Globe
EX771405       --> CTGAATGTCGTCAAGGCTAATGTCTACCTAGACTCTTCCGGCAAGCACAA  Raphanus raphanistrum subsp. landra
EY933202       --> TTGAATGTCGTCAAGGCTAATGTCTACCTAGACTCTTCCGGCAAGCACAA  Raphanus sativus var. oleiformis
EY946506       --> TTGAATGTCGTCAAGGCTAATGTCTACCTAGACTCTTCCGGCAAGCACAA  Raphanus sativus cv Rat-Tail Radish #3870
EY914450       --> TTGAATGTCGTCAAGGCTAATGTCTACCTAGACTCTTCCGGCAAGCACAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY921520       --> CTGAATGTCGTCAAGGCTAATGTCTACCTAGACTCTTCCGGCAAGCACAA  Raphanus raphanistrum subsp. landra
FD980400       --> TTGAATGTCGTCAAGGCTAATGTCTACCTAGACTCTTCCGGCAAGCACAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD989155       --> CTGAATGTCGTCAAGGCTAATGTCTACCTAGACTCTTCCGGCAAGCACAA  Raphanus raphanistrum subsp. landra
EY922169       --> CTGAATGTCGTCAAGGCTAATGTCTACCTAGACTCTTCCGGCAAGCACAA  Raphanus raphanistrum subsp. landra
EW725672       --> TTGAATGTCGTCAAGGCTAATGTCTACCTAGACTCTTCCGGCAAGCACAA  Raphanus sativus cv Early Scarlet Globe
EY925545       --> CTGAATGTCGTCAAGGCTAATGTCTACCTAGACTCTTCCGGCTAGCACAA  Raphanus raphanistrum subsp. landra
FD986475       --> ..................................................  Raphanus raphanistrum subsp. landra

               551    -    601
UN18521        --> CAAATTTGCCATTACTAAAGCGGATAGTGGAAGAAAAGTAGAAGACCCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY910491       <-- CAAATTTGCCATTACTAAAGCGGATAGTGGAAGAAAAGTAGAAGACCCTG
EW729581       <-- CAAATTTGCCATTACTAAAGCGGATAGTGGAAGAAAAGTAGAAGACCCTG
FD984973       <-- CAAATTTGCCATTACTAAAGCGGATAGTGGAAGAAAAGTAGAAGACCCTG
EY917650       <-- CAAATTTGCCATTACTAAAGCGGATAGTGGAAGAAAAGTAGAAGACCCTG
EX775446       <-- CAAATTTGCCATTACTAAAGCGGATAGTGGAAGAAAAGTAGAAGACCCTG
EY918183       <-- ..................................................
FD554833       <-- ..................................................
FD559059       --> CAAATTTGCCATTACTAAAGCGGATAGTGGAAGAAAAGTAGAAGACCCTG
EW726904       --> CAAATTTGCCATTACTAAAGCGGATAGTGGAAGAAAAGTAGAAGACCCTG
EX771405       --> CAAATTTGCCATTACTAAAGCGGATAGTGGAAGAAAAGTAGAAGACCCTG
EY933202       --> CAAATTTGCCATTACTAAAGCGGATAGTGGAAGAAAAGTAGAAGACCCTG
EY946506       --> CAAATTTGCCATTACTAAAGCGGATAGTGGAAGAAAAGTAGAAGACCCTG
EY914450       --> CAAATTTGCCATTACTAAAGCGGATAGTGGAAGAAAAGTAGAAGACCCTG
EY921520       --> CAAATTTGCCATTACTAAAGCGGATAGTGGAAGAAAAGTAGAAGACCCTG
FD980400       --> CAAATTTGCCATTACTAAAGCGGATAGTGGAAGAAAAGTAGAAGACCCTG
FD989155       --> CAAATTTGCCATTACTAAAGCGGATAGTGGAAGAAAAGTAGAAGACCCTG
EY922169       --> CAAATTTGCCATTACTAAAGCGGATAGTGGAAGAAAAGTAGAAGACCCTG
EW725672       --> CAAATTTGCCATTACTAAAGCGGATAGTGGAAGAAAAGTAGAAGACCCTG
EY925545       --> CAAATTTGCCATTACTAAAGCGGATAGTGGAAGAAAAGTA--AGACCCCG
FD986475       --> ..................................................

               601    -    651
UN18521        --> AACTGCTTGAGGCCATCCGTCTCACTGTCATCAACAACATGCTTGAGTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY910491       <-- AACTGCTTGAGGCCATCCGTCTCACTGTCATCAACAACATGCTTGAGTTT
EW729581       <-- AACTGCTTGAGGCCATCCGTCTCACTGTCATCAACAACATGCTTGAGTTT
FD984973       <-- AACTGCTTGAGGCCATCCGTCTCACTGTCATCAACAACATGCTTGAGTTT
EY917650       <-- AACTGCTTGAGGCCATCCGTCTCACTGTCATCAACAACATGCTTGAGTTT
EX775446       <-- AACTGCTTGAGGCCATCCGTCTCACTGTCATCAACAACATGCTTGAGTTT
EY918183       <-- ......TTGAGGCCATCCGTCTCACTGTCATCAACAACATGCTTGAGTTT
FD554833       <-- ..................................................
FD559059       --> AACTGCTTGAGGCCATCCGTCTCACTGTCATCAACAACATGCTTGAGTTT
EW726904       --> AACTGCTTGAGGCCATCCGTCTCACTGTCATCAACAACATGCTTGAGTTT
EX771405       --> AACTGCTTGAGGCCATCCGTCTCACTGTCATCAACAACATGCTTGAGTTT
EY933202       --> AACTGCTTGAGGCCATCCGTCTCACTGTCATCAACAACATGCTTGAGTTT
EY946506       --> AACTGCTTGAGGCCATCCGTCTCACTGTCATCAACAACATGCTTGAGTTT
EY914450       --> AACTGCTTGAGGCCATCCGTCTCACTGTCATCAACAACATGCTTGAGTTT
EY921520       --> AACTGCTTGAGGCCATCCGTCTCACTGTCATCAACAACATGCTTGAGTTT
FD980400       --> AACTGCTTGAGGCCATCCGTCTCACTGTCATCAACAACATGCTTGCTTTT
FD989155       --> AACTGCTTGAGGCCATCCGTCTCACTGTCATCAACAACATGCTTGAGTTT
EY922169       --> AACTGCTTGAGGCCATCCGTCTCACTGTCATCAACAACATGCTTGAGTTT
EW725672       --> AACTGCTTGAGGCCATCCGTCTCACTGTCATCAACAACATGCTTGAGTTT
EY925545       --> AACTGCTTGAGGTCATCCGTCTCACTGTCATCAACAACATGCTTGAGTTT
FD986475       --> ..................................................

               651    -    701
UN18521        --> CATCCTGAATCAAGTTCTCAATTGGCAATGGGAGCAGCTTTTGGTGTTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY910491       <-- CATCCTGAATCAAGTTCTCAATTGGCAATGGGTGCAGCTTTTGGTGTTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW729581       <-- CATCCTGAATCAAGTTCTCAATTGGCAATGGGTGCAGCTTTTGGTGTTCT  Raphanus sativus cv Early Scarlet Globe
FD984973       <-- CATCCTGAATCAAGTTCTCAATTGGCAATGGGAGCAGCTTTTGGTGTTCT  Raphanus raphanistrum subsp. landra
EY917650       <-- CATCCTGAATCAAGTTCTCAATTGGCAATGGGAGCAGCTTTTGGTGTTCT  Raphanus raphanistrum subsp. landra
EX775446       <-- CATCCTGAATCAAGTTCTCAATTGGCAATGGGAGCAGCTTTTGGTGTTTT  Raphanus raphanistrum subsp. landra
EY918183       <-- CATCCTGAATCAAGTTCTCAATTGGCAATGGGAGCAGCTTTTGGTGTTCT  Raphanus raphanistrum subsp. landra
FD554833       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD559059       --> CATCCTGAATCAAGTTCTCAATTGGCAATGGGAGCAGCTTTTGGTGTTCT  Raphanus raphanistrum subsp. landra
EW726904       --> CATCCTGAATCAAGTTCTCA-TTGGCAATGGGTGCAGCTTTTGGTGTTCT  Raphanus sativus cv Early Scarlet Globe
EX771405       --> CATCCTGAATCAAG....................................  Raphanus raphanistrum subsp. landra
EY933202       --> CATCCTGAATCAAGTTCTCAATTGGCAATGGGAGCAGCTTTTGGTGTTCT  Raphanus sativus var. oleiformis
EY946506       --> CATCCTGAATCAAGTTCTCAATTGGCAATGGGAGCAGCTTTTGGTGTTCT  Raphanus sativus cv Rat-Tail Radish #3870
EY914450       --> CATCCTGAATCAAGTTCTCAATTGGCAATGGGTGCAGCTTTTGGTGTTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY921520       --> CATCCTGAATCAAGTTCTCAATTGGCAATGGGAGCAGCTTTTGGTGTTCT  Raphanus raphanistrum subsp. landra
FD980400       --> CATCCTGAATCAAGTTCTCAATTGGCAATGGGTGCAGCTTTTGGTGT...  Raphanus raphanistrum subsp. raphanistrum (NY)
FD989155       --> CATCCTGAATCAAGTTCTCAATTGGCAATGGGAGCAGCTTTTGGTGTTCT  Raphanus raphanistrum subsp. landra
EY922169       --> CATCCTGAATCAAGTTCTCAATTGGCAATGGGAGCAGCTTTTGGTGTTCT  Raphanus raphanistrum subsp. landra
EW725672       --> CATCCTGAATCAAGTTCTCAATTGGCAATGGGTGCAGCTTTTGGTGTTCT  Raphanus sativus cv Early Scarlet Globe
EY925545       --> CATCCTGAATCAAGTTCTCAATTGGCAATGGGAGCAGCTTTTGGTGTTCT  Raphanus raphanistrum subsp. landra
FD986475       --> ..................................................  Raphanus raphanistrum subsp. landra

               701    -    751
UN18521        --> TCCACCAACTGAACAGGTTGATGTGGACATTGCAACACACATAAGCATTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY910491       <-- TCCACCAACTGAACTGGTTGATGTGGACATTGCAACACACATAAGCATTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW729581       <-- TCCACCAACTGAACTGGTTGATGTGGACATTGCAACACACTTAAGCATTG  Raphanus sativus cv Early Scarlet Globe
FD984973       <-- TCCACCAACCGAACAGGTTGATGTGGACATTGCAACACACATAAGCATTA  Raphanus raphanistrum subsp. landra
EY917650       <-- TCCACCAACTGAACAGGTTGATGTGGACATTGCAACACACATAAGCATTA  Raphanus raphanistrum subsp. landra
EX775446       <-- TCCACCAACTGAACAGGTTGATGTGGACATTGCAACACACATAAGCATTA  Raphanus raphanistrum subsp. landra
EY918183       <-- TCCACCAACTGAACAGGTTGATGTGGACATTGCAACACACATAAGCATTA  Raphanus raphanistrum subsp. landra
FD554833       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD559059       --> TCCACCAACTGA......................................  Raphanus raphanistrum subsp. landra
EW726904       --> TCCACCAACTGAACTGGTTGATGTGGACATTGCAACACACt.........  Raphanus sativus cv Early Scarlet Globe
EX771405       --> ..................................................  Raphanus raphanistrum subsp. landra
EY933202       --> TCCACCAACTGAACTGGTTGATGTGGACATTGCAACACACATAAGCATTG  Raphanus sativus var. oleiformis
EY946506       --> TCCACCAACTGAACTGGTTGATGTGGACATTGCA-CACACATAAGCATTG  Raphanus sativus cv Rat-Tail Radish #3870
EY914450       --> TC-ACCAACTGA-CTGGGTGATGTGG........................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY921520       --> TCCACCAACTGAACAG-TTGATGTGGACATTGCAACACACATAAGCATTA  Raphanus raphanistrum subsp. landra
FD980400       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD989155       --> TCCACCAACCGAACAGGTTGATGTGGACATTGCAACACACATAAGCATTA  Raphanus raphanistrum subsp. landra
EY922169       --> TCCACCAACTGAACAGGTTGATGTGGACATTGCAACACACATAAGCATTA  Raphanus raphanistrum subsp. landra
EW725672       --> TCCACCAACTGAACTGGTTGATGTGGACATTGCAACACACTTAAGCATTG  Raphanus sativus cv Early Scarlet Globe
EY925545       --> TCCACCAACTGAACAGGTTGATGTGGACATTTCAACACACATAAGCATTA  Raphanus raphanistrum subsp. landra
FD986475       --> ..................................................  Raphanus raphanistrum subsp. landra

               751    -    801
UN18521        --> AAGATGATGGACCCGACCGCAGTTTACTATACATAGAAACAGCAGATAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY910491       <-- AAGATGATGGACCAGACCGCAGTTTACTATACATAGAAACAGCAGATAGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW729581       <-- AAGATGATGGACCTGACCGCAGTTTACTATACATAGAAACAGCAGATAGG  Raphanus sativus cv Early Scarlet Globe
FD984973       <-- AAGATGATGGACCCGACCGCAGTTTACTATACATAGAAACAGCAGATAGG  Raphanus raphanistrum subsp. landra
EY917650       <-- AAGATGATGGACCCGACCGCAGTTTACTATACATAGAAACAGCAGATAGG  Raphanus raphanistrum subsp. landra
EX775446       <-- AAGATGATGGACCCGACCGCAGTTTACTATACATAGAAACAGCAGATAGG  Raphanus raphanistrum subsp. landra
EY918183       <-- AAGATGATGGACCCGACCGCAGTTTACTATACATAGAAACAGCAGATAGG  Raphanus raphanistrum subsp. landra
FD554833       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD559059       --> ..................................................  Raphanus raphanistrum subsp. landra
EW726904       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX771405       --> ..................................................  Raphanus raphanistrum subsp. landra
EY933202       --> AAGATGATGGACCTGACCG...............................  Raphanus sativus var. oleiformis
EY946506       --> AAGATGATGGACCTGACCGCAGTTTACTATACATAGAA-CAGCAG.....  Raphanus sativus cv Rat-Tail Radish #3870
EY914450       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY921520       --> AAGATGATGGACCCGACCGCAGTTTACTATACATAGAAACAGCAGATAGG  Raphanus raphanistrum subsp. landra
FD980400       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD989155       --> AAGATGATGGACCCGACCGCAGTTTACTATACATAGAAACAGCAG.....  Raphanus raphanistrum subsp. landra
EY922169       --> AAGATGATGGACCCGACCGCAGTTTACTATACATAGAAACAGCAGATAGc  Raphanus raphanistrum subsp. landra
EW725672       --> AAGATGATGGACCTGACCGCAGTTTACTATACATAGAAACAGCAGATAGG  Raphanus sativus cv Early Scarlet Globe
EY925545       --> AAGATGATGGACCCGACCGCAGTTTACTACACATAGAAACAGCAGATAGG  Raphanus raphanistrum subsp. landra
FD986475       --> .................................................G  Raphanus raphanistrum subsp. landra

               801    -    851
UN18521        --> CCTGGACTGTTAGTTGAGCTGGTCAAAATCATTTCAGATATCAGCGTCGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY910491       <-- CCTGGGCTGTTAGTTGAGCTGGTGAAAATCATTTCTGATATCAGCGTCGC
EW729581       <-- CCTGGGCTGTTAGTTGAGCTGGTGAAAATCATTTCTGATATCAGCGTCGC
FD984973       <-- CCTGGACTGTTAGTTGAGCTGGTCAAAATCATTTCAGATATCAGCGTCGC
EY917650       <-- CCTGGACTGTTAGTTGAGCTGGTCAAAATCATTTCAGATATCAGCGTCGC
EX775446       <-- CCTGGACTGTTAGTTGAGCTGGTCAAAATCATTTCAGATATCAGCGTCGC
EY918183       <-- CCTGGACTGTTAGTTGAGCTGGTCAAAATCATTTCAGATATCAGCGTCGC
FD554833       <-- ..................................................
FD559059       --> ..................................................
EW726904       --> ..................................................
EX771405       --> ..................................................
EY933202       --> ..................................................
EY946506       --> ..................................................
EY914450       --> ..................................................
EY921520       --> C-TGGACTGTTAGTTGAGCTGGTCAAA-TCATTTCAGATATCAGCGTCGC
FD980400       --> ..................................................
FD989155       --> ..................................................
EY922169       --> ctg...............................................
EW725672       --> CCTGGGCTGTTAGTTGAGCTGGTGAAAATCATTTCTGATATCAGCGTCGC
EY925545       --> CCTGGACTGTTAGTTGAGCTGGTCAAAATCATTTCAGATATCAGCGTCGC
FD986475       --> CCTGGACTGTTAGTTGAGCTGGTCAAAATCATTTCAGATATCAGCGTCGC

               851    -    901
UN18521        --> TGTCGAATCTGGAGAATTTGACACCGAGGGTTTGCTGGCTAAGGTAAAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY910491       <-- TGTCGAATCTGGAGAATTTGACACCGAGGGTTTGTTGGCTAAGGTGAAGT
EW729581       <-- TGTCGAATCTGGAGAATTTGACACCGAGGGTTTGTTGGCTAAGGTAAAGT
FD984973       <-- TGTCGAATCTGGAGAATTTGACACCGAGGGTTTGCTGGCTAAGGTAAAGT
EY917650       <-- TGTCGAATCTGGAGAATTTGACACCGAGGGTTTGCTGGCTAAGGTAAAGT
EX775446       <-- TGTCGAATCTGGAGAATTTGACACCGAGGGTTTGCTGGCTAAGGTAAAGT
EY918183       <-- TGTCGAATCTGGAGAATTTGACACCGAGGGTTTGCTGGCTAAGGTAAAGT
FD554833       <-- ......ATCTGGAGAATTTGACACCGAGGGTTTGCTGGTTAAGGTAAAGT
FD559059       --> ..................................................
EW726904       --> ..................................................
EX771405       --> ..................................................
EY933202       --> ..................................................
EY946506       --> ..................................................
EY914450       --> ..................................................
EY921520       --> TGTCGAATCTGGAGA-TTTGACACCGAGGttgctgg..............
FD980400       --> ..................................................
FD989155       --> ..................................................
EY922169       --> ..................................................
EW725672       --> TGTCGAATCTGGAGAATTTGACACCGAGGGTTTGTTGGCTAAGGTAAAGT
EY925545       --> TGTCGAATCTGGAGAATTTGACACCGAGGGTTTGCTGGCTAAGGTAAAGT
FD986475       --> TGTCGAATCTGGAGAATTTGACACCGAGGGTTTGCTGGCTAAGGTAAAGT

               901    -    951
UN18521        --> TCCACGTAAGTTACAGAAACAAAGCTTTAATCAAGCCTCTCCAGCAGGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY910491       <-- TCCACGTAAGTTACAGAAACAAAGCTTTAATCAAGCCTCTCCAGCAGGTT
EW729581       <-- TCCACGTAAGTTACAGAAACAAAGCTTTAATCAAGCCTCTCCAGCAGGTT
FD984973       <-- TCCACGTAAGTTACAGAAACAAAGCTTTAATCAAGCCTCTCCAGCAGGTT
EY917650       <-- TCCACGTAAGTTACAGAAACAAAGCTTTAATCAAGCCTCTCCAGCAGGTT
EX775446       <-- TCCACGTAAGTTACAGAAACAAAGCTTTAATCAAGCCTCTCCAGCAGGTT
EY918183       <-- TCCACGTAAGTTACAGAAACAAAGCTTTAATCAAGCCTCTCCAGCAGGTT
FD554833       <-- TCCACGTAAGTTACAGAAACAAAGCTTTAATCAAGCCTTTCCAGCAGGTT
FD559059       --> ..................................................
EW726904       --> ..................................................
EX771405       --> ..................................................
EY933202       --> ..................................................
EY946506       --> ..................................................
EY914450       --> ..................................................
EY921520       --> ..................................................
FD980400       --> ..................................................
FD989155       --> ..................................................
EY922169       --> ..................................................
EW725672       --> TCCACGTAAGTTACAGAAACAAAGCTTTAATCAAGCCTCTCCAGCAGGTT
EY925545       --> TCCACGTAAGTTACAGAAACAAAGCTTTAATCAAGCCTCTCCAGCAGGTT
FD986475       --> TCCACGTAAGTTACAGAAACAAAGCTTTAATCAAGCCTCTCCAGCAGGTT

               951    -   1001
UN18521        --> ATTGCTAATAGTCTGAGGTATTTCTTGAGGCGTCCATCAACTGACGAGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY910491       <-- ACTGTTAATAGTCTGAGGTATTTCTTGAGGCGTCCATCAACTGACGAGTC
EW729581       <-- ACTGCTAATATTCTGAGGTATTTCTTGAGGCGTCCATCAACTGACGAGTC
FD984973       <-- ATTGCTAATAGTCTGAGGTATTTCTTGAGGCGTCCATCAACTGACGAGTC
EY917650       <-- ATTGCTAATAGTCTGAGGTATTTCTTGAGGCGTCCATCTACTGACGAGTC
EX775446       <-- ATTGCTAAT.........................................
EY918183       <-- ATTGCTAATAGTCTGAGGTATTTCTTGAGGCGTCCATCAACTGACGAGTC
FD554833       <-- ATTGCTAATAGTTTGAGGTATTTCTTGAGGCGTCCATCAACTGACGAGTC
FD559059       --> ..................................................
EW726904       --> ..................................................
EX771405       --> ..................................................
EY933202       --> ..................................................
EY946506       --> ..................................................
EY914450       --> ..................................................
EY921520       --> ..................................................
FD980400       --> ..................................................
FD989155       --> ..................................................
EY922169       --> ..................................................
EW725672       --> ACTGCTAATAGTCTGAGGTATTTCTTGAGGCGTCCATCAACTGACGAGTC
EY925545       --> ATTGCTAATAGTCTGAGGTATTTCTTGAGGCGTCCATCAACTGACGAGTC
FD986475       --> ATTGCTAATAGTCTGAGGTATTTCTTGAGGCGCCCATCAACTGACGAGTC

               1001   -   1051
UN18521        --> AAGTTTCTGAAATGATGTTTACCAAAAAAAAAA---TGAAGTCACATTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY910491       <-- AAGTTTCTGAAATGCTATTTACC...........................
EW729581       <-- AAGTT.............................................
FD984973       <-- AAGTTTCTGAAATGATGTTTACC...........................
EY917650       <-- AAGTTTCTGAAATGATGTTTACC...........................
EX775446       <-- ..................................................
EY918183       <-- AAGTTTCTGAAATGATGTTTACCAAAAAAAAAA---TGAAGTCACATTCC
FD554833       <-- AAGTTTTTGAAATGATGTTTACCAAAAAAAAAAAAATGAAGTCACATTCC
FD559059       --> ..................................................
EW726904       --> ..................................................
EX771405       --> ..................................................
EY933202       --> ..................................................
EY946506       --> ..................................................
EY914450       --> ..................................................
EY921520       --> ..................................................
FD980400       --> ..................................................
FD989155       --> ..................................................
EY922169       --> ..................................................
EW725672       --> AAGTTTCTGAtctatttacc..............................
EY925545       --> AAGTTTCTGAAATGATGTTTACCAAAAAAAAAAAAATGAAGTCACATTCC
FD986475       --> AAGTTTCTGAAATGATGTTTACCAAAAAAAAAA---TGAAGTCACATTCC

               1051   -   1101
UN18521        --> ATATGACTGCTTTTTACCACTTCCTTTTTCTTTACATTTGACAAAAATAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY910491       <-- ..................................................
EW729581       <-- ..................................................
FD984973       <-- ..................................................
EY917650       <-- ..................................................
EX775446       <-- ..................................................
EY918183       <-- ATATGACTGCTTTTTACCACTTCCTTTTTCTTTACATTTGACAAAAATAA
FD554833       <-- ATATGACTGCTTTTTACCACTTCCTTTTTCTTTACATTTGACAAAAATAA
FD559059       --> ..................................................
EW726904       --> ..................................................
EX771405       --> ..................................................
EY933202       --> ..................................................
EY946506       --> ..................................................
EY914450       --> ..................................................
EY921520       --> ..................................................
FD980400       --> ..................................................
FD989155       --> ..................................................
EY922169       --> ..................................................
EW725672       --> ..................................................
EY925545       --> ATATGACTGCTTTTTACCACTTCCTTTTTCTTTACATTTGACAAAAATAA
FD986475       --> ATATGACTGCTTTTTACCACTTCCTTTTTCTTTACATT-GACAAAAATAA

               1101   -   1151
UN18521        --> GCTGTTTTTTTAGTGGCCTTATCTCATACATCTGTGTAGTAGCAACATTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY910491       <-- ..................................................
EW729581       <-- ..................................................
FD984973       <-- ..................................................
EY917650       <-- ..................................................
EX775446       <-- ..................................................
EY918183       <-- GCTGTTTTTTTAGTGGCCTTATCTCATACATCTGTGTAGTAGCAACATTA
FD554833       <-- GCTGTTTTTTTAGTGGCCTTATTTCATACATCTGTGTAGTAGCAACATTA
FD559059       --> ..................................................
EW726904       --> ..................................................
EX771405       --> ..................................................
EY933202       --> ..................................................
EY946506       --> ..................................................
EY914450       --> ..................................................
EY921520       --> ..................................................
FD980400       --> ..................................................
FD989155       --> ..................................................
EY922169       --> ..................................................
EW725672       --> ..................................................
EY925545       --> GCTGTTTTTTTAGTGGCCTTATCTCATACATCTGT...............
FD986475       --> GCTGTTTTTTTAGTGGCCTTATCTCATACATCTGTGTAGTAGCAACATTA

               1151   -   1201
UN18521        --> TCTGTTTCAATCATTTATCAAATTTACTTTCATTTACGACCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY910491       <-- ..........................................
EW729581       <-- ..........................................
FD984973       <-- ..........................................
EY917650       <-- ..........................................
EX775446       <-- ..........................................
EY918183       <-- TCTGTTTCAATCATTTATCAAATTTACTTTCAc.........
FD554833       <-- TCTGTTTCAATCATTTATCAAATTTACTTTCATTTACGACCT
FD559059       --> ..........................................
EW726904       --> ..........................................
EX771405       --> ..........................................
EY933202       --> ..........................................
EY946506       --> ..........................................
EY914450       --> ..........................................
EY921520       --> ..........................................
FD980400       --> ..........................................
FD989155       --> ..........................................
EY922169       --> ..........................................
EW725672       --> ..........................................
EY925545       --> ..........................................
FD986475       --> TCTGTTTCAATCATTTATCAAATTTACTTTCATT........