1 - 51
UN18595 --> GCACGAGGCTCCTTCCTCCCCTATTCAATTCTTCTTCCTCACTTCCCATC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD974331 <-- ..................................................
FY428602 --> GCACGAGGCTCCTTCCTCCCCTATTCAATTCTTCTTCCTCACTTCCCATC
FY434122 --> ..................................................
FY453679 --> ..................................................
FY439230 --> ..................................................
EY900013 --> ..................................................
FD978011 --> ..................................................
51 - 101
UN18595 --> TCTCTCTCTCTCTCCTTAAAAACCCCAACTTTTCTCTCCTCATCCTCACC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD974331 <-- ..................................................
FY428602 --> TCTCTCTCTCTCTCCTTAAAAACCCCAACTTTTCTCTCCTCATCCTCACC
FY434122 --> ....................AACCCCAACTTTTCTCTCCTCATCCTCACC
FY453679 --> .................................CTCTCCNCATCCTCACC
FY439230 --> ...........................................CCTCACC
EY900013 --> ............................................gggACC
FD978011 --> .............................................ggACC
101 - 151
UN18595 --> CCCATCTTTCCCAAATGGAGATCTGCACTTACTTCAAATCCCAACCCACA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD974331 <-- ..................................................
FY428602 --> CCCATCTTTCCCAAATGGAGATCTGCACTTACTTCAAATCCCAACCCACA
FY434122 --> CCCATCTTTCCCAAATGGAGATCTGCACTTACTTCAAATCCCAACCCACA
FY453679 --> CCCATCTTTCCCAAATGGAGATCTGCACTTACTTCAAATCCCAACCCACA
FY439230 --> CCCATCTTTCCCAAATGGAGATCTGCACTTACTTCAAATCCCAACCCACA
EY900013 --> CCCATCTTTCCCAAATGGAGATCTGCACTTACTTCAAATCCCAACCCACA
FD978011 --> CCCATCTTTCCCAAATGGAGATCTGCACTTACTTCAAATCCCAACCCACA
151 - 201
UN18595 --> TGGCTCCTCCTCCTCTTCGCCCTCGGCTCCCTCTCCCTCCTCAAGTTCAC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD974331 <-- ..................................................
FY428602 --> TGGCTCCTCCTCCTCTTCGCCCTCGGCTCCCTCTCCCTCCTCAAGTTCAC
FY434122 --> TGGCTCCTCCTCCTCTTCGCCCTCGGCTCCCTCTCCCTCCTCAAGTTCAC
FY453679 --> TGGCTCCTCCTCCTCTTCGCCCTCGGCTCCCTCTCCCTCCTCAAGTTCAC
FY439230 --> TGGCTCCTCCTCCTCTTCGCCCTCGGCTCCCTCTCCCTCCTCAAGTTCAC
EY900013 --> TGGCTCCTCCTCCTCTTCGCCCTCGGCTCCCTCTCCCTCCTCAACTTCAC
FD978011 --> TGGCTCCTCCTCCTCTTCGCCCTCGGCTCCCTCTCCCTCCTCAAGTTCAC
201 - 251
UN18595 --> CTTCACCCTCCTCACCTCCCTCTACATCTACTTCCTCCGCCCCGGCAAAA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD974331 <-- ..................................................
FY428602 --> CTTCACCCTCCTCACCTCCCTCTACATCTACTTCCTCCGCCCCGGCAAAA
FY434122 --> CTTCACCCTCCTCACCTCCCTCTACATCTACTTCCTCCGCCCCGGCAAAA
FY453679 --> CTTCACCCTCCTCACCTCCCTCTACATCTACTTCCTCCGCCCCGGCAAAA
FY439230 --> CTTCACCCTCCTCACCTCCCTCTACATCTACTTCCTCCGCCCCGGCAAAA
EY900013 --> CTTCACCCTCCTCACCTCCCTCTACATCTACTTCCTCCGCCCCGGCAAAA
FD978011 --> CTTCACCCTCCTCACCTCCCTCTACATCTACTTCCTCCGCCCCGGCAAAA
251 - 301
UN18595 --> ACCTCCGCCGCCGCTACGGCTCCTGGGCCATCATCACCGGCCCCACCGAC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD974331 <-- ..................................................
FY428602 --> ACCTCCGCCGCCGCTACGGCTCCTGGGCCATCATCACCGGCCCCACCGAC
FY434122 --> ACCTCCGCCGCCGCTACGGCTCCTGGGCCATCATCACCGGCCCCACCGAC
FY453679 --> ACCTCCGCCGCTGCTACGGCTCCTGGGCCATCATCACCGGCCCCACCGAC
FY439230 --> ACCTCCGCCGCCGCTACGGCTCCTGGGCCATCATCACCGGCCCCACCGAC
EY900013 --> ACCTCCGCCGCTGCTACGGCTCCTGGGCCATCATCACCGGCCCCACCGAC
FD978011 --> ACCTCCGCCGCCGCTACGGCTCCTGGGCCATCATCACCGGCCCCACCGAC
301 - 351
UN18595 --> GGCATCGGCAAAGCCTTCGCCTTTCAGCTCGCCCACAAAGGCCTCAACCT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD974331 <-- ..................................................
FY428602 --> GGCATCGGCAAAGCCTTCGCCTTTCAGCTCGCCCACAAAGGCCTCAACCT
FY434122 --> GGCATCGGCAAAGCCTTCGCCTTTCAGCTCGCCCACAAAGGCCTCAACCT
FY453679 --> GGCATCGGCAAAGCCTTCGCCTTTCAGCTCGCCCACAAAGGCCTCAACCT
FY439230 --> GGCATCGGCAAAGCCTTCGCCTTTCAGCTCGCCCACAAAGGCCTCAACCT
EY900013 --> GGCATCGACAAAGCCTTCGCCTTTCAGCTCGCCCACAAAGGCCTCAACCT
FD978011 --> GGCATCGGCAAAGCCTTCGCCTTTCAGCTCGCCCACAAAGGCCTCAACCT
351 - 401
UN18595 --> CGTCCTCGTCGCCCGCAACCCCGACAAGCTCAAACACGTCTCCGACTCCA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD974331 <-- ..................................................
FY428602 --> CGTCCTCGTCGCCCGCAACCCCGACAAGCTCAAACACGTCTCCGACTCCA
FY434122 --> CGTCCTCGTCGCCCGCAACCCCGACAAGCTCAAACACGTCTCCGACTCCA
FY453679 --> CGTCCTCGTCGCCCGCAACCCCGACAAGCTCAAACACGTCTCCGACTCCA
FY439230 --> CGTCCTCGTCGCCCGCAACCCCGACAAGCTCAAACACGTCTCCGACTCCA
EY900013 --> CGTCCTCGTCGCCCGCAACCCCGACAAGCTCAAACACGTCTCCGACTCCA
FD978011 --> CGTCCTCGTCGCCCGCAATCCCGACAAGCTCAAACACGTCTCCGACACCA
401 - 451
UN18595 --> TCACGTCCAAGCACCCCAACACCCAGATCAAGACCGTCCTCATGGACTTC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD974331 <-- ..................................................
FY428602 --> TCACGTC-AAGCACCC-AACACCCAATAGAAGACCGTCCTCA........
FY434122 --> TCACGTCCAAGCACCCCAACACCCAGATCAAGACCGTCCTCATGGACTTC
FY453679 --> TCACGTCCACGCACCCCAACACCCAGATCAAGACCGTGCTCATGGACTTC
FY439230 --> TCACGTCCAAGCACCCCAACACCCAGATCAAGACCGTCCTCATGGACTTC
EY900013 --> TCACATCCAAGCACCCCAACACCCAGATCAAGACCGTGCTCATGGACTTC
FD978011 --> TCAAATCCAAGCACCCCAACACCCAGATCAAGACCGTCCTCATGGACTTC
451 - 501
UN18595 --> TCCGGAGACATCGACGGAGGCGTGGAGAGGATCAAGGAGGCGATCGAGGG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD974331 <-- ..................................................
FY428602 --> ..................................................
FY434122 --> TCCGGAGACATCGACGGAGGCGTGGGGAGGATCGAGGAGGCGATCGAGGG
FY453679 --> TCCGGAGACATCGACGGAGGCGTGGAGAGGATCAAGGAGGCGATCGAGGG
FY439230 --> TCCGGAGACATCGACGGAGGCGTGGGGAGGATCGAGGAGGCGATCGAGGG
EY900013 --> TCCGGAGACATCGACGGAGGCGTGGAGAGGATCAAGGAGGCCATCGAGGG
FD978011 --> TCCGGAGACATCGACGGAGGCGTGGAGAGGATCAAGGAGGCCATCGAGGG
501 - 551
UN18595 --> TCTCGAAGTCGGGATCTTGATCAACAACGCTGGGGTCTCGTATCCGTACG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD974331 <-- .......................ACAACGCTGGGGTCTCGTATCCGTACG
FY428602 --> ..................................................
FY434122 --> TCTCGAAGTCGGGATCTTGATCAACAACGCTGGGGTCTCGTATCCGTACG
FY453679 --> TCTCGAAGTCGGGATCTTGATCAACAACGCTGGGGTCTCGTATCCGTACG
FY439230 --> TCTCGAAGTCGGGATCTTGATCAACAACGCTGGGGTCTCGTATCCGTACG
EY900013 --> TCTTGAGGTCGGGATCTTGATCAACAACGCTGGGGTCTCGTATCCGTACG
FD978011 --> TCTTGAGGTCGGGATCTTGATCAACAACGCTGGGGTCTCGTATCCGTACG
551 - 601
UN18595 --> CTAAGTATTTTCACGAGGTTGATGAGGAGCTGCTTGGGAGTTTGATTAAG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD974331 <-- CTAAGTATTTTCACGAGGTTGATGAGGAGCTGCTTGGGAGTTTGATTAAG Raphanus raphanistrum subsp. raphanistrum (NY)
FY428602 --> .................................................. Raphanus sativus cv GSK3-1
FY434122 --> CTAAGTATTTTCACGAGGTTGACGAGGAGCTGCTTGGGAGCTTGATTAAG Raphanus sativus cv GSK3-1
FY453679 --> CTAAGTATTTTCACGAGGTTGATGAGGAGCTGCTTGGGAGCTTGATTAAG Raphanus sativus cv GSK3-1
FY439230 --> CTAAGTATTTTCACGAGGTTGACGAGGAGCTGCTTGGGAGCTTGATTAAG Raphanus sativus cv GSK3-1
EY900013 --> CTAAGTATTTTCACGAGGTGGATGAGGAGCCGCTTGGGAGTTTGATTAAG Raphanus raphanistrum subsp. maritimus
FD978011 --> CTAAGTATTTTCACGAGGTTGATGAGGAGCTGCTTGGGAGTTTGATTAAG Raphanus raphanistrum subsp. raphanistrum (NY)
601 - 651
UN18595 --> ATTAATGTTGAAGGGACGACGAAGGTTACGAAGGCTGTGTTGGGGAATAT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD974331 <-- ATTAATGTTGAAGGGACGACGAAGGTTACCAAGGCTGTGTTGGGGAATAT
FY428602 --> ..................................................
FY434122 --> ATTAACGTTGAAGGGACTACGAAGGTTACGAAGGCTGTGTTGGGGAATAT
FY453679 --> ATTAATGTTGAAGGGACGACGAAGGTTACGAAGGCTGTGTTGGGGAATAT
FY439230 --> ATTAACGTTGAAGGGACTACGAAGGTTACGAAGGCTGTGTTGGGGAATAT
EY900013 --> ATTAATGTT.........................................
FD978011 --> ATTAATGTTGAAGGGACGACGAAGGTTACCAAGGCTGTGTTGGGGAATAT
651 - 701
UN18595 --> GCTGAAGAGGAAGCGAGGGGCGATTGTTAATATGGGGTCTGGTGCTGCTG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD974331 <-- GTTGAAGAGGAAGCGTGGGGCGATTGTTAATATGGGGTCTGGTGCTGCTG
FY428602 --> ..................................................
FY434122 --> GCTGAAGAGGAAGCGAGGGGCGATTGTTAATATGGGGTCTGGTGCTGCTG
FY453679 --> GCTGAAGAGGAAGCGAGGGGCGATTGTTAATATGGGGTCTGGTGCTGCTG
FY439230 --> GCTGAAGAGGAAGCGAGGGGCGATTGTTAATATGGGGTCTGGTGCTGCTG
EY900013 --> ..................................................
FD978011 --> GTTGAAGAGGAAGCGTGGGGCGATTGTTAATATGGGGTCTGGTGCTGCTG
701 - 751
UN18595 --> CTCTTATCCCTTCCTATCCTTTCTACTCTGTTTATGCCGGCGCTAAAACG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD974331 <-- CTCTTATCCCTTCTTATCCTTTCTACTCTGTTTATGCCGGCGCTAAAACG
FY428602 --> ..................................................
FY434122 --> CTCTTATCCCTTCCTATCCTTTCTACTCTGTTTATGCCGGCGCTAAAACG
FY453679 --> CTCTTATCCCTTCCTATCCTTTCTACTCTGTTTATGCCGGCGCTAAAACG
FY439230 --> CTCTTATCCCTTCCTATCCTTTCTACTCTGTTTATGCCGGCGCTAAAACG
EY900013 --> ..................................................
FD978011 --> CTCTTATCCCTTCTTATCCTTTCTACTCTGTTTATGCCGGCGCTAAAACG
751 - 801
UN18595 --> TATGTGGATCAGTTCTCAAAGTGTCTCCATGTTGAGTACAAGAAGAGTGG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD974331 <-- TATGTGGATCAGTTCTCAAAGTGTCTCCATGTTGAGTACAAGAAGAGTGG
FY428602 --> ..................................................
FY434122 --> TATGTGGATCAGTTCTCAAAGTGTCTCCATGTTGAGTACAAGAAGAGTGG
FY453679 --> TATGTGGATCAGTTCTCAAAGTGTCTCCATGTTGAGTACAAGAAGAGTGG
FY439230 --> TATGTGGATCAGTTCTCAAAGTGTCTCCATGTTGAGTACAAGAAGAGTGG
EY900013 --> ..................................................
FD978011 --> TATGTGGATCAGTTCTCAAAGTGTCTCCATGTTGAGTACAAGAAGAGTGG
801 - 851
UN18595 --> GATTGATGTTCAATGCCAGGTGCCCTTGTACGTTGCGACAAAGATGACTA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD974331 <-- GATTGATGTTCAATGCCAGGTACCCTTGTACGTTGCGACAAAGATGACTA
FY428602 --> ..................................................
FY434122 --> GATTGATGTTCAATGCCAGGTGCCCTTGTACGTTGCGACAAAGATGACTA
FY453679 --> GATTGATGTTCAATGCCAGGTGCCCTTGTACGTTGCGACAAAGATGACTA
FY439230 --> GATTGATGTTCAATGCCAGGTGCCCTTGTACGTTGCGACAAAGATGACTA
EY900013 --> ..................................................
FD978011 --> GATTGATGTTCAATGCCAGGTACCCTTGTACGTTGCGACAAAGATGACTA
851 - 901
UN18595 --> AGATTAGGAGAGCGTCTTTCTTAGTTGCATCTCCAGAGGGTTACGCAAAG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD974331 <-- AGATTAGGAGAGCGTCTTTCTTAGTTGCATCTCCAGAGGGTTACGCAAAG
FY428602 --> ..................................................
FY434122 --> AGATTAGGAGAGCGTCTTTCTTAGTTGCATCTCCAGAGGGTTACGCAAAG
FY453679 --> AGATTAGGAGAGCGTCTTTCTTAGTTGCATCTCCAGAGGGTTACGCAAAG
FY439230 --> AGATTAGGAGAGCGTCTTTCTTAGTTGCATCTCCAGAGGGTTACGCAAAG
EY900013 --> ..................................................
FD978011 --> AGATTAG-AGAGCGTCTTTCT.............................
901 - 951
UN18595 --> GCAGCACTACGTTTTGTAGGGTACGAACCACGTTGCACACCTTACTGGCC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD974331 <-- GCAGCACTGCGTTTTGTAGGCTACGAACCACGTTGCACACCTTACTGGCC
FY428602 --> ..................................................
FY434122 --> GCAGCACTACGTTTTGTAGGGTACGAACCACGTTGCACACTTTACTGGCC
FY453679 --> GCAGCACTACGTTTTGTAGGGTACGAACCACGTTGCACACCTTACTGGCC
FY439230 --> GCAGCACTACGTTTTGTAGGGTACGAACCACGTTGCACACCTTACTGGCC
EY900013 --> ..................................................
FD978011 --> ..................................................
951 - 1001
UN18595 --> TCACGCACTCATGGGTTATGTTGTCTCTGCATTGCCCGAAAGCGTCTTTG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD974331 <-- TCACGCACTCATGGGTTATATTGTCTCTGCATTGCCCGAAAGCGTCTTTG
FY428602 --> ..................................................
FY434122 --> TCACGCACTCA.......................................
FY453679 --> TCACGCACTCATGGGTTATGTTGTCTCTGC....................
FY439230 --> TCACGCACTCATGGGTTATGTTGT..........................
EY900013 --> ..................................................
FD978011 --> ..................................................
1001 - 1051
UN18595 --> AATCCTTCAACATTAAGAGGTGCCTCCAGATCCGGAAGAAGGGCATGCTT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD974331 <-- AATCCTTCAACATTAAGAGGTGCCTCCAGATCCGGAAGAAGGGCATGCTT
FY428602 --> ..................................................
FY434122 --> ..................................................
FY453679 --> ..................................................
FY439230 --> ..................................................
EY900013 --> ..................................................
FD978011 --> ..................................................
1051 - 1101
UN18595 --> AAGGACTCCTCCAGTAAAAAAGAATGAAGCGTTTTTTGAGGGCTGCAAGA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD974331 <-- AAGGACTCCTCCAGTAAAAAAGAATGAAGCGTTTTTTGAGGGCTGCAAGA
FY428602 --> ..................................................
FY434122 --> ..................................................
FY453679 --> ..................................................
FY439230 --> ..................................................
EY900013 --> ..................................................
FD978011 --> ..................................................
1101 - 1151
UN18595 --> TCTTCTTCTGCAGTTGGTTTCTCCAAAGTTTATGGTCTAGATCTTTGTCA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD974331 <-- TCTTCTTCTGCAGTTGGTTTCTCCAAAGTTTATGGTCTAGATCTTTGTCA
FY428602 --> ..................................................
FY434122 --> ..................................................
FY453679 --> ..................................................
FY439230 --> ..................................................
EY900013 --> ..................................................
FD978011 --> ..................................................
1151 - 1201
UN18595 --> GACTTGTATGCTTTAGTTTCGATGTTCCTTATTTTTAAATTAAAAACCCT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD974331 <-- GACTTGTATGCTTTAGTTTCGATGTTCCTTATTTTTAAATTAAAAACCCT
FY428602 --> ..................................................
FY434122 --> ..................................................
FY453679 --> ..................................................
FY439230 --> ..................................................
EY900013 --> ..................................................
FD978011 --> ..................................................
1201 - 1251
UN18595 --> AACGTGCACGTATCCTGCCTGTTTTTTTTCTTTTATTTAAATAAAATTGA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD974331 <-- AACGTGCACGTATCCTGCCTGTTTTTTTTCTTTTATTTAAATAAAATTGA
FY428602 --> ..................................................
FY434122 --> ..................................................
FY453679 --> ..................................................
FY439230 --> ..................................................
EY900013 --> ..................................................
FD978011 --> ..................................................
1251 - 1301
UN18595 --> ATGTTGGAAAAAATGAATTGGAGAGCATTTGAATGTG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD974331 <-- ATGTTGGAAAAAATGAATTGGAGAGCATTTGAATGTG
FY428602 --> .....................................
FY434122 --> .....................................
FY453679 --> .....................................
FY439230 --> .....................................
EY900013 --> .....................................
FD978011 --> .....................................
| 
