RadishBase

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Alignment for radish unigene UN18609

               1      -     51
UN18609        --> GGGAAACAAACTTTATTTTAAAATGCACTACTTAGGATCCAATACAAACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX748410       <-- .GGAAACAAACTTTATTTTAAAATGCACTACTTAGGATCCAATACAAACC
EY916535       <-- ...AAACAAACTTTATTTTAAAATGCACTACTCAGGATCCAATACAAACC
FD535732       <-- ..................................................
EV528312       <-- ..................................................
EV528759       <-- ..................................................
EV565877       <-- ..................................................
EY905290       <-- ..................................................
EY906376       <-- ..................................................
EV567573       <-- ..................................................
FD533806       <-- ..................................................
FD973213       <-- ..................................................
EV528413       <-- ..................................................
EX747385       <-- ..................................................
EY898277       <-- ..................................................
FD560140       <-- ..................................................
FD559717       <-- ..................................................
FD965423       <-- ..................................................
EY914664       <-- ..................................................
FD555747       --> GGGAAACAAACTTTATTTTAAAATGCACTACTTAGGATCCAATACAAACC
EV532343       --> .GGAAACAAACTTTATTTTAAAATGCACTACTTAGGATCCAATACAAACC
EV532662       --> .GGAAACAAACTTTATTTTAAAATGCACTACTTAGGATCCAATACAAACC
EX751596       --> .GGAAACAAACTTTATTTTAAAATGCACTACTTAGGATCCAATACAAACC
EX752344       --> .GGAAACAAACTTTATTTTAAAATGCACTACTTAGGATCCAATACAAACC
EY894380       --> .GGAAACAAACTTTATTTTAAAATGCACTACTTAGGATCCAATACAAACC
EY912204       --> .GGAAACAAACTTTATTTTAAAATGCACTACTCAGGATCCAATACAAACC
FD555375       --> .GGAAACAAACTTTATTTTAAAATGCACTACTTAGGATCCAATACAAACC
FD961166       --> .GGAAACAAACTTTATTTTAAAATGCACTACTTAGGATCCAATACAAACC
FY437026       --> .GGAAA-AAACTTTATTTTAAAATGCACTACTTAGGATCCAATACAAACC
EY910664       --> ctGAAACAAACTTTATTTTAAAATGCACTACTCAGGATCCAATACAAACC
EY933883       --> ...................AAAATGCACTACTTAGGATCCAATACAAACC

               51     -    101
UN18609        --> ACCACACAAACACTGACGCTTGCCCTCACGTATTATTAGAAAACACACAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX748410       <-- ACCACACAAACACTGACGCTTGCCCTCACGTATTATTAGAAAACACACAA  Raphanus raphanistrum subsp. maritimus
EY916535       <-- ACCACACAAACACTGACGCTTGCCCTCACGTATTATTAGGAAACACACAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD535732       <-- ...................................TTAGAAA-CACACAA  Raphanus raphanistrum subsp. maritimus
EV528312       <-- ...........................................CACACAA  Raphanus raphanistrum subsp. maritimus
EV528759       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV565877       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY905290       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY906376       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV567573       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD533806       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD973213       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV528413       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX747385       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY898277       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD560140       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD559717       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD965423       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY914664       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD555747       --> ACCACACAAACACTGACGCTTGCCCTCACGTATTATTAGAAAACACACAA  Raphanus raphanistrum subsp. landra
EV532343       --> ACCACACAAACACTGACGCTTGCCCTCACGTATTATTAGAAAACACACAA  Raphanus raphanistrum subsp. maritimus
EV532662       --> ACCACACAAACACTGACGCTTGCCCTCACGTATTATTAGAAAACACACAA  Raphanus raphanistrum subsp. maritimus
EX751596       --> ACCACACAAACACTGACGCTTGCCCTCACGTATTATTAGAAAACACACAA  Raphanus raphanistrum subsp. maritimus
EX752344       --> ACCACACAAACACTGACGCTTGCCCTCACGTATTATTAGAAAACACACAA  Raphanus raphanistrum subsp. maritimus
EY894380       --> ACCACACAAACACTGACGCTTGCCCTCACGTATTATTAGAAAACACACAA  Raphanus raphanistrum subsp. maritimus
EY912204       --> ACCACACAAACACTGACGCTTGCCCTCACGTATTATTAGGAAACACACAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD555375       --> ACCACACAAACACTGACGCTTGCCCTCACGTATTATTAGAAAACACACAA  Raphanus raphanistrum subsp. landra
FD961166       --> ACCACACAAACACTGACGCTTGCCCTCACGTATTATTAGAAAACACACAA  Raphanus raphanistrum subsp. maritimus
FY437026       --> ACCACACAAACACTGACGCTTGCCCTCACGTATTATTAGAAAACACACAA  Raphanus sativus cv GSK3-1
EY910664       --> ACCACACAAACACTGACGCTTGCCCTCACGTATTATTAGGAAACACACAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY933883       --> ACCACACAAACACTGACGCTTGCCCTCACGTATTATTAGGAAACACACAA  Raphanus sativus cv Early Scarlet Globe

               101    -    151
UN18609        --> AAACCAAAGCTAAACGAGAACGAAAGCAGAGCACAGAATCATCAGAAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX748410       <-- AAACCAAAGCTAAACGAGAACGAAAGCAGAGCACAGAACCATCAGAAACA  Raphanus raphanistrum subsp. maritimus
EY916535       <-- AAACCAAAGC--TTTGAGAACGAAAGCAGAGCAAAGCATCATCAGAAACA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD535732       <-- AA-CCAAAGCTAAACGAGAACGAAAGCAGAGCACAGAATCATCAGAAACA  Raphanus raphanistrum subsp. maritimus
EV528312       <-- AAACCAAAGCTAAACGAGAACGAAAGCAGAGCACAGAATCATCAGAAACA  Raphanus raphanistrum subsp. maritimus
EV528759       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV565877       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY905290       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY906376       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV567573       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD533806       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD973213       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV528413       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX747385       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY898277       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD560140       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD559717       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD965423       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY914664       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD555747       --> AAACCAAAGCTAAAAGAGAACGAAAGCAGAGCACAGAATCATCAGAAACA  Raphanus raphanistrum subsp. landra
EV532343       --> AAACCAAAGCTAAACGAGAACGAAAGCAGAGCACAGAATCATCAGAAACA  Raphanus raphanistrum subsp. maritimus
EV532662       --> AAACCAAAGCTAAACGAGAACGAAAGCAGAGCACAGAATCATCAGAAACA  Raphanus raphanistrum subsp. maritimus
EX751596       --> AAACCAAAGCTAAACGAGAAAGAAAGCAGAGCACGGAATCATCAGAAACA  Raphanus raphanistrum subsp. maritimus
EX752344       --> AAACCAAAGCTAAACGAGAACGAAAGCAGAGCACAGAACCATCAGAAACA  Raphanus raphanistrum subsp. maritimus
EY894380       --> AAACCAAAGCTAAACGAGAACGAAAGCAGAGCACAGAATCATCAGAAACA  Raphanus raphanistrum subsp. maritimus
EY912204       --> AAACCAAAGCT--TTGAGAACGAAAGCAGAGCAAAGCATCATCAGAAACA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD555375       --> AAACCAAAGCTAAACGAGAACGAAAGCAGAGCACAGAATCATCAGAAACA  Raphanus raphanistrum subsp. landra
FD961166       --> AAACCAAAGCTAAACGAGAACGAAAGCAGAGCACAGAATCATCAGAAACA  Raphanus raphanistrum subsp. maritimus
FY437026       --> AAACCAAAGCTAAACGAGAACGAAAGCAGAGCACAGAATCATCAGAAACA  Raphanus sativus cv GSK3-1
EY910664       --> AAACCAAAGCT--TTGAGAACGAAAGCAGAGCACAGCATCATCAGAAACA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY933883       --> AAACCAAAGCTAAAAGAGAACGAAAGCAGAGCACAGCATTATCAAAAACA  Raphanus sativus cv Early Scarlet Globe

               151    -    201
UN18609        --> GAAGACACAACACAAGGTTTAATTCAGCATCAGAGATTATTCTTCCTAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX748410       <-- GAAGACACAACACAAGGTTTAATTCAGCATCAGAGATTATTCTTCCTAAA  Raphanus raphanistrum subsp. maritimus
EY916535       <-- GAAGACACAACACAAGGTTTTATTCAGTATCAGAGATTATTCTTCCTAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD535732       <-- GAAGACACAACACAAGGTTTAATTCAGCATCAGAGATTATTCT-CCTAAA  Raphanus raphanistrum subsp. maritimus
EV528312       <-- GAAGACACAACACAAGGTTTAATTCAGCATCAGAGATTATTCTTCCTAAA  Raphanus raphanistrum subsp. maritimus
EV528759       <-- ..........................................TTCCTAAA  Raphanus raphanistrum subsp. maritimus
EV565877       <-- ..........................................TTCCTAAA  Raphanus raphanistrum subsp. landra
EY905290       <-- ..............................................TAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY906376       <-- ...............................................AAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV567573       <-- ................................................AA  Raphanus raphanistrum subsp. landra
FD533806       <-- ................................................AA  Raphanus raphanistrum subsp. maritimus
FD973213       <-- ................................................AA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV528413       <-- .................................................A  Raphanus raphanistrum subsp. maritimus
EX747385       <-- .................................................A  Raphanus raphanistrum subsp. maritimus
EY898277       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD560140       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD559717       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD965423       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY914664       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD555747       --> GAAGACACAACACAAGGTTTAATTCAGCATCAGAGATTATTCTTCCTAAA  Raphanus raphanistrum subsp. landra
EV532343       --> GAAGACACAACACAAGGTTTAATTCAGCATCAGAGATTATTCTTCCTAAA  Raphanus raphanistrum subsp. maritimus
EV532662       --> GAAGACACAACACAAGGTTTAATTCAGCATCAGAGATTATTCTTCCTAAA  Raphanus raphanistrum subsp. maritimus
EX751596       --> GAAGACACAACACAAGGTTTAATTCAGCATCAGAGATTATTCTTCCTAAA  Raphanus raphanistrum subsp. maritimus
EX752344       --> GAAGACACAACACAAGGTTTAATTCAGCATCAGAGATTATTCTTCCTAAA  Raphanus raphanistrum subsp. maritimus
EY894380       --> GAAGACACAACACAAGGTTTAATTCAGCATCAGAGATTATTCTTCCTAAA  Raphanus raphanistrum subsp. maritimus
EY912204       --> GAAGACACAACACAAGGTTTTATTCAGTATCAGAGATTATTCTTCCTAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD555375       --> GAAGACACAACACAAGGTTTAATTCAGCATCAGAGATTATTCTTCCTAAA  Raphanus raphanistrum subsp. landra
FD961166       --> GAAGACACAACACAAGGTTTAATTCAGCATCAGAGATTATTCTTCCTAAA  Raphanus raphanistrum subsp. maritimus
FY437026       --> GAAGACACAACACAAGGTTTAATTCAGCATCAGAGATTATTCTTCCTAAA  Raphanus sativus cv GSK3-1
EY910664       --> GAAGACACAACACAAGGTTTTATTCAGTATCAGAGATTATTCTTCCTAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY933883       --> GAAAACACAACACAAGGTTTTATTCAGTATCAAAAATTATTCTTCCTAAA  Raphanus sativus cv Early Scarlet Globe

               201    -    251
UN18609        --> CTCAGCGGCGTACGCAACAATTTTCTCTTGGTCAGGGAGAGAC-TTAGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX748410       <-- CTCAGCGGCGTACGCAACAATTTTCTCTTGGTCAGGGAGAGAC-TTAGAC
EY916535       <-- CTCAGCGGCGTACGCAACAATTTTCTCTTGGTCAGGGAGAGAC-TTAGAC
FD535732       <-- CTCAGCGGCATACGCAACAATTTTCTCTTGGTCAGGGAGAGAC-TTAGAC
EV528312       <-- CTCAGCGGCGTACGCAACAATTTTCTCTTGGTCAGGGAGAGAC-TTAGAC
EV528759       <-- CTCAGCGGCGTACGCAACAATTTTCTCTTGGTCAGGGAGAGAC-TTAGAC
EV565877       <-- CTCAGCGGCGTACGCAACAATTTTCTCTTGGTCAGGGAGAGAC-TTAGAC
EY905290       <-- CTCAGCGGCGTACGCAACAATTTTCTCTTGGTCAGGGAGAGAC-TTAGAC
EY906376       <-- CTCAGCGGCGTACGCAACAATTTTCTCTTGGTCAGGGAGAGAC-TTAGAC
EV567573       <-- CTCAGCGGCGTACGCAACAATTTTCTCTTGGTCAGGGAGAGAC-TTAGAC
FD533806       <-- CTCAGCGGCGTACGCAACAATTTTCTCTTGGTCAGGGAGAGAC-TTAGAC
FD973213       <-- CTCAGCGGCGTACGCAACAATTTTCTCTTGGTCAGGGAGAGAC-TTAGAC
EV528413       <-- CTCAGCGGCGTACGCAACAATTTTCTCTTGGTCAGGGAGAGAC-TTAGAC
EX747385       <-- CTCAGCGGCGTACGCAACAATTTTCTCTTGGTCAGGGAGAGAC-TTAGAC
EY898277       <-- CTCAGCGGCGTACGCAACAATTTTCTCTTGGTCAGGGAGAGAC-TTAGAC
FD560140       <-- ....................................GAGAGAC-TTAGAC
FD559717       <-- ..................................................
FD965423       <-- ..................................................
EY914664       <-- ..................................................
FD555747       --> CTCAGCGGCGTACGCAACAATTTTCTCTTGGTCAGGGAGAGAC-TTAGAC
EV532343       --> CTCAGCGGCGTACGCAACAATTTTCTCTTGGTCAGGGAGAGAC-TTAGAC
EV532662       --> CTCAGCGGCGTACGCAACAATTTTCTCTTGGTCAGGGAGAGAC-TTAGAC
EX751596       --> CTCAGCGGCGTACGCAACAATTTTCTCTTGGTCAGGGAGAGAC-TTAGAC
EX752344       --> CTCAGCGGCGTACGCAACAATTTTCTCTTGGTCAGGGAGAGAC-TTAAAC
EY894380       --> CTCAGCGGCGTACGCAACAATTTTCTCTTGGTCAGGGAGAGAC-TTAAAC
EY912204       --> CTCAGCGGCGTACGCAACAATTTTCTCTTGGTCAGGGAGAGAC-TTAGAC
FD555375       --> CTCAGCGGCGTACGCAACAATTTTCTCTTGGTCAGGGAGAGAC-TTAGAC
FD961166       --> CTCAGCGGCGTACGCAACAATTTTCTCTTGGTCAGGGAGAGAC-TTAAAC
FY437026       --> CTCAGCGGCGTACGCAACAATTTTCTCTTGGTCAGGGAGAGACATTAGAC
EY910664       --> CTCAGCGGCGTACGCAACAATTTTCTCTTGGTCAGGGAGAGAC-TTAGAC
EY933883       --> CTCAGCGGCGTACGCAACAATTTTCTCTTGGTCAGGGAGAGAC-TTAAAC

               251    -    301
UN18609        --> ACGC-TCTCTTTCTCCATACACCTCTTAGCCCAAGCAATCAGTTTTGGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX748410       <-- ACGC-TCTCTTTCTCCATACACCTCTTAGCCCAAGCAATCAGTTTTGGAC
EY916535       <-- ACGC-TCTCTTTCTCCATACACCTCTTAGCCCAAGCAATCAGTTTTGGAC
FD535732       <-- ACGC-TCTCTTTCTCCATACACCTCTTAGCCCAAGCAATCAGTTTTGGAC
EV528312       <-- ACGC-TCTCTTTCTCCATACACCTCTTAGCCCAAGCAATCAGTTTTGGAC
EV528759       <-- ACGC-TCTCTTTCTCCATACAC-TCTTAGCCCAAGCAATCAGTTTTGGAC
EV565877       <-- ACGC-TCTCTTTCTCCATACACCTCTTAGCCCAAGCAATCAGTTTTGGAC
EY905290       <-- ACGC-TCTCTCTCTCCATACACCTCTTAGCCCAAGCAATCAGTTTTGGAC
EY906376       <-- ACGC-TCTCTTTCTGCATACACCTCTTAGCCCAAGCAATCAGTTTTGGAC
EV567573       <-- ACGC-TCTCTTTCTCCATACACCTCTTAGCCCAAGCAATCAGTTTTGGAC
FD533806       <-- ACGC-TCTCTTTCTCCATACACCTCTTAGCCCAAGCAATCAGTTTTGGAC
FD973213       <-- ACGC-TCTCTTTCTCCATACATCTCTTGGCCCAAGCAATCAGTTTTGGAC
EV528413       <-- ACGC-TCTCTTTCTCCATACACCTCTTAGCCCAAGCAATCAGTTTTGGAC
EX747385       <-- ACGC-TCTCTTTCTCCATACACCTCTTAGCCCAAGCAATCAGTTTTGGAC
EY898277       <-- ACGC-TCTCTTTCTCCATACACCTCTTAGCCCAAGCAATCAGTTTTGGAC
FD560140       <-- ACGC-TCTCTTTCTCCATACACCTCTTAGCCCAAGCAATCAGTTTTGGAC
FD559717       <-- .........................TTAGCCCAAGCAATCAGTTTTGGAC
FD965423       <-- ..........................TAGCCCAAGCAATCAGTTTTGGAC
EY914664       <-- ..................................................
FD555747       --> ACGC-TCTCTTTCTCCATACACCTCTTAGCCCAAGCAATCAGTTTTGGAC
EV532343       --> ACGC-TCTCTTTCTCCATACACCTCTTAGCCCAAGCAATCAGTTTTGGAC
EV532662       --> ACGC-TCTCTTTCTCCATACACCTCTTAGCCCAAGCAATCAGTTTTGGAC
EX751596       --> ACGC-TCTCTTTCTCCATACACCTCTTAGCCCAAGCAATCAGTTTTGGAC
EX752344       --> ACGC-TCTCTTTCTCCATACACCTCTTAGCCCAAGCAATCAGTTTTGGAC
EY894380       --> ACGC-TCTCTTTCTCCATACACCTCTTAGCCCAAGCAATCAGTTTTGGAC
EY912204       --> ACGC-TCTCTTTCTCCATACACCTCTTAGCCCAAGCAATCAGTTTTGGAC
FD555375       --> ACGC-TCCCTTTCTCCATACACCTCTTAGCCCAAGCAATCAGTTTTGGAC
FD961166       --> ACGC-TCTCTTTCTCCATACACCTCTTAGCCCAAGCAATCAGTTTTGGAC
FY437026       --> ACGCGTCTCTTTCTCCATACACCTCTTAGCCCAAGCAATCAGTTTTGGAC
EY910664       --> ACGC-TCTCTTTCTCCATACACCTCTTAGCCCAAGCAATCAGTTTTGGAC
EY933883       --> ACGC-TCTCTTTCTGCATACACCTCTTAACCCAAGCAATCGGTTTTGGAC

               301    -    351
UN18609        --> TCTCTGCCTCGATGCTGAAGTTACCAAACTTCTCATATGCTCCGAACCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX748410       <-- TCTCc.............................................
EY916535       <-- TCTCTGCCTCGATGCTGAAGTTACCAAACTTCTCATATGCTCCGAACCAA
FD535732       <-- TCTCTGCCTCGATGCTGAAGTTACCAAACTTCTCATATGCTCCGAACCAA
EV528312       <-- TCTCTGCCTCGATGCTGAAGTTACCAAACTTCTCATATGCTCCGAACCAA
EV528759       <-- TCTCTGCCTCGATGCTGAAGTTACCAAACTTCTCATATGCTCCGAACCAA
EV565877       <-- TCTCTGCCTCGATGCTGAAGTTACCAAACTTCTCATATGCTCCGAACCAA
EY905290       <-- TCTCTGCCTCGATGCTGAAGTTACCAAACTTCTCATATGCTCCGAACCAA
EY906376       <-- TCTCTGCCTCGATGCTGAAGTTACCAAACTTCTCATATGCTCCGAACCAA
EV567573       <-- TCTCTGCCTCGATGCTGAAGTTACCAAACTTCTCATATGCTCCGAACCAA
FD533806       <-- TCTCTGCCTCGATGCTGAAGTTACCAAACTTCTCATATGCTCCGAACCAA
FD973213       <-- TCTCTGCCTCGATGCTGAAGTTACCAAACTTCTCATATGCTCCGAACCAA
EV528413       <-- TCTCTGCCTCGATGCTGAAGCTACCAAACTTCTCATATGCTCCGAACCAA
EX747385       <-- TCTCTGCCTCGATGCTGAAGTTACCAAACTTCTCATATGCTCCGAACCAA
EY898277       <-- TCTCTGCCTCGATGCTGAAGTTACCAAACTTCTCATATGCTCCGAACCAA
FD560140       <-- TCTCTGCCTCGATGCTGAAGTTACCAAACTTCTCATATGCTCCGAACCAA
FD559717       <-- TCTCTGCCTCGATGCTGAAGTTACCAAACTTCTCATATGCTCCGAACCAA
FD965423       <-- TCTCTGCCTCGATGCTGAAGTTACCAAACTTCTCATATGCTCCGAACCAA
EY914664       <-- ...........ATGCTGAAGTTACCAAACTTCTCATATGCTCCGAACCAA
FD555747       --> TCTCTGCCTCGATGCTGAAGTTACCAAACTTCTCATATGCTCCGAACCAA
EV532343       --> TCTCTGCCTCGATGCTGAAGTTACCAAACTTCTCATATGCTCCGAACCAA
EV532662       --> TCTCTGCCTCGATGCTGAAGTTACCAAACTTCTCATATGCTCCGAACCAA
EX751596       --> TCTCTGCCTCGATGCTGAAGTTACCAAACTTCTCATATGCTCCGAACCAA
EX752344       --> TCTCc.............................................
EY894380       --> TCTCTGCCTCGATGCTGAAGTTACCAAACTTCTCATATGCTCCGAACCAA
EY912204       --> TCTCTGCCTCGATGCTGAAGTTACCAAACTTCTCATATGCTCCGAACCAA
FD555375       --> TCTCTGCCTCGATGCTGAAGTTACCAAACTTCTCATATGCTCCGAACCAA
FD961166       --> TCTCTGCCTCGATGCTGAAGTTACCAAACTTCTCATATGCTCCGAACCAA
FY437026       --> TCTCTGC...........................................
EY910664       --> TCTCTGCCTCGATGCTGAAGTTACCAAACTTCTCATATGCTCCGAACCAA
EY933883       --> TCTCTGCCTCGATGCTGAAGTTACCAAACTTCTCATATGCTCCGAACCAA

               351    -    401
UN18609        --> CTGTAGAATGTAATCAGTGCAATGTCTACATAGCCAAAGGTATCTCCACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX748410       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY916535       <-- CTGTAGAATGTAATCAGTGAAATGTCTACATAGCCAAAGGTATCTCCACC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD535732       <-- CTGTAGAATGTAATCAGTGCAATGTCTACATAGCCAAAGGTATCTCCACC  Raphanus raphanistrum subsp. maritimus
EV528312       <-- CTGTAGAATGTAATCAGTGCAATGTCTACATAGCCAAAGGTATCTCCACC  Raphanus raphanistrum subsp. maritimus
EV528759       <-- CTGTAGAATGTAATCAGTGCAATGTCTACATAGCCAAAGGTATCTCCACC  Raphanus raphanistrum subsp. maritimus
EV565877       <-- CTGTAGAATGTAATCAGTGCAATGTCTACATAGCCAAAGGTATCTCCACC  Raphanus raphanistrum subsp. landra
EY905290       <-- CTGTAGAATGTAATCAGTGAAATGTCTACATAGCCAAAGGTATCTCCACC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY906376       <-- CTGTAGAATGTAATCAGTGCAATGTCTACATAGCCAAATGTATCTCCACC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV567573       <-- CTGTAGAATGTAATCAGTGCAATGTCTACATAGCCAAAGGTATCTCCACC  Raphanus raphanistrum subsp. landra
FD533806       <-- CTGTAGAATGTAATCAGTGCAATGTCTACATAGCCAAAGGTATCTCCACC  Raphanus raphanistrum subsp. maritimus
FD973213       <-- CTGTAGAATGTAATCAGTGAAATGTCTACATAGCCAAAGGTATCTCCACC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV528413       <-- CTGTAGAATGTAATCAGTGCAATGTCTACATAGCCAAAGGTATCTCCACC  Raphanus raphanistrum subsp. maritimus
EX747385       <-- CTGTAGAATGTAATCAGTGCAATGTCTACATAGCCAAAGGTATCTCCACC  Raphanus raphanistrum subsp. maritimus
EY898277       <-- CTGTAGAATGTAATCAGTGCAATGTCTACATAGCCAAAGGTATCTCCACC  Raphanus raphanistrum subsp. maritimus
FD560140       <-- CTGTAGAATGTAATCAGTGCAATGTCTACATAGCCAAAGGTATCTCCACC  Raphanus raphanistrum subsp. landra
FD559717       <-- CTGTAGAATGTAATCAGTGCAATGTCTACATAGCCAAAGGTATCTCCACC  Raphanus raphanistrum subsp. landra
FD965423       <-- CTGTAGAATGTAATCAGTGCAATGTCTACATAGCCAAAGGTATCTCCACC  Raphanus raphanistrum subsp. maritimus
EY914664       <-- CTGTAGAATGTAATCAGTGAAATGTCTACATAGCCAAAGGTATTTCCACC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD555747       --> CTGTAGAATGTAATCAGTGCAATGTCTACATAGCCAAAGGTATCTCCACC  Raphanus raphanistrum subsp. landra
EV532343       --> CTGTAGAATGTAATCAGTGCAATGTCTACATAGCCAAAGGTATCTCCACC  Raphanus raphanistrum subsp. maritimus
EV532662       --> CTGTAGAATGTAATCAGTGCAATGTCTACATAGCCAAAGGTATCTCCACC  Raphanus raphanistrum subsp. maritimus
EX751596       --> CTGTAGAATGTAATCAGTGCAATGTCTACATAGCCAAAGGTATCTCCACC  Raphanus raphanistrum subsp. maritimus
EX752344       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY894380       --> CTGTAGAATGTAATCAGTGCAATGTCTACATAGCCAAAGGTATCTCCACC  Raphanus raphanistrum subsp. maritimus
EY912204       --> CTGTAGAATGTAATCAGTGAAATGTCTACATAGCCAAAGGTATCTCCACC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD555375       --> CTGTAGAATGTAATCAGTGCAATGTCTACATAGCCAAAGGTATCTCCACC  Raphanus raphanistrum subsp. landra
FD961166       --> CTGTAGAATGTAATCAGTGCAATGTCTACATAGCCAAAGGTATCTCCACC  Raphanus raphanistrum subsp. maritimus
FY437026       --> ..................................................  Raphanus sativus cv GSK3-1
EY910664       --> CTGTAGAATGTAATCAGTGAAATGTCTACATAGCCAAAGGTATTTCCACC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY933883       --> CTGTAAAATATAATCAGTGCAATGTCTACATAGCCAAAGGTATCTCCACC  Raphanus sativus cv Early Scarlet Globe

               401    -    451
UN18609        --> AAAGTAAGGTTTGTCTCCAAGTTCAGCTTCAAGAATCTTCACTGCCTCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX748410       <-- ..................................................
EY916535       <-- AAAGTAAGGTTTGTCTCCAAGTTCAGCTTCAAGAATCTTCACTGCCTCAA
FD535732       <-- AAAGTAAGGTTTGTCTCCAAGTTCAGCTTCAAGAATCTTCACTGCCTCAA
EV528312       <-- AAAGTAAGGTTTGTCTCCAAGTTCAGCTTCAAGAATCTTCACTGCCTCAA
EV528759       <-- AAAGTAAGGTTTGTCTCCAAGTTCAGCTTCAAGAATCTTCACTGCCTCAA
EV565877       <-- AAAGTAAGGTTTGTCTCCAAGTTCAGCTTCAAGAATCTTCACTGCCTCAA
EY905290       <-- AAAGTAAGGTTTGTCTCCAAGCTCCGCTTCAAGAATCTTCACTGCCTCAA
EY906376       <-- AAAGTAAGGTTTGTC---TCGCTCAGCTTCAAGAATCTTCACTGCCTCAA
EV567573       <-- AAAGTAAGGTTTGTCTCCAAGTTCAGCTTCAAGAATCTTCACTGCCTCAA
FD533806       <-- AAAGTAAGGTTTGTCTCCAAGTTCAGCTTCAAGAATCTTCACTGCCTCAA
FD973213       <-- AAAGTAAGGTTTGTCTCCAAGCTCCGCTTCAAGAATCTTCACTGCCTCAA
EV528413       <-- AAAGTAAGGTTTGTCTCCAAGTTCAGCTTCAAGAATCTTCACTGCCTCAA
EX747385       <-- AAAGTAAGGTTTGTCTCCAAGTTCAGCTTCAAGAATCTTCACTGCCTCAA
EY898277       <-- AAAGTAAGGTTTGTCTCCAAGTTCAGCTTCAAGAATCTTCACTGCCTCAA
FD560140       <-- AAAGTAAGGTTTGTCTCCAAGTTCAGCTTCAAGAATCTTCACTGCCTCAA
FD559717       <-- AAAGTAAGGTTTGTCTCCAAGTTCAGCTTCAAGAATCTTCACTGCCTCAA
FD965423       <-- AAAGTAAGGTTTGTCTCCAAGTTCAGCTTCAAGAATCTTCACTGCCTCAA
EY914664       <-- AAAGTAAGGTTTGTCTCCAAGTTCAGCTTCAAGAATCTTCACTGCCTCAA
FD555747       --> AAAGTAAGGTTTGTCTCCAAGTTCAGCTTCAAGAATCTTCACTGCCTCAA
EV532343       --> AAAGTAAGGTTTGTCTCCAAGTTCAGCTTCAAGAATCTTCACTGCCTCAA
EV532662       --> AAAGTAAGGTTTGTCTCCAAGTTCAGCTTCAAGAATCTTCACTGCCTCAA
EX751596       --> AAAGTAAGGTTTGTCTCCAAGTTCAGCTTCAAGAATCTTCACTGCCTCAA
EX752344       --> ..................................................
EY894380       --> AAAGTAAGGTTTGTCTCCAAGTTCAGCTTCAAGAATCTTCACTGCCTCAA
EY912204       --> AAAGTAAGGTTTGTCTCCAAGTTCAGCTTCAAGAATCTTCACTGCCTCAA
FD555375       --> AAAGTAAGGTTTGTCTCCAAGTTCAGCTTCAAGAATCTTCACTGCCTCAA
FD961166       --> AAAGTAAGGTTTGT....................................
FY437026       --> ..................................................
EY910664       --> AAAGTAAGGTTTGTCTCCAAGTTCAGCTTCAAGAATCTTCACTGCCTCAA
EY933883       --> AAAGTAAGGTTTGTCTCCAAGTTCAGCTTCAAGAATCTTCACTGCCTCAA

               451    -    501
UN18609        --> TAAACTCCTTCACCCCTGCTGCTTGTTCCTCACCTTTCTTTCCCCATATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX748410       <-- ..................................................
EY916535       <-- TAAACTCCTTCACCCCTGCTGCTTGTTCCTCACCTTTCGTTCCCCATATC
FD535732       <-- TAAACTCCTTCACCCCTGCTGCTTGTTCCTCACCTTTCTTTCCCCATATC
EV528312       <-- TAAACTCCTTCACCCCTGCTGCTTGTTCCTCACCTTTCTTTCCCCATATC
EV528759       <-- TAAACTCCTTCACCCCCGCTGCTTGTTCCTCACCTTTCTTTCCCCATATC
EV565877       <-- TAAACTCCTTCACCCCTGCTGCTTGTTCCTCACCTTTCTTTCCCCATATC
EY905290       <-- TAAACTCCTTCACCCCTGCTGCTTGTTCCTCACCTTTCTTTCCCCATATC
EY906376       <-- TAAACTCCTTCGCCCCTGCTGCTTGTTCCTCACCTTTCTTTCCCCATATC
EV567573       <-- TAAACTCCTTCACCCCTGCTGCTTGTTCCTCACCTTTCTTTCCCCATATC
FD533806       <-- TAAACTCCTTCACCCCTGCTGCTTGTTCCTCACCTTTCTTTCCCCATATC
FD973213       <-- TAAACTCCTTCACCCCTGCTGCTTGCTCCTCACCTTTCTTTCCCCATATC
EV528413       <-- TAAACTCCTTCACCCCTGCTGCTTGTTCCTCACCTTTCTTTCCCCATATC
EX747385       <-- TAAACTC-TTCACCCCTGCTGCTTGTTCCTCACCTTTCTTTCCCCATATC
EY898277       <-- TAAACTCCTTCACCCCTGCTGCTTGTTCCTCACCTTTCTTTCCCCATATC
FD560140       <-- TAAACTCCTTCACCCCTGCTGCTTGTTCCTCACCTTTCTTTCCCCATATC
FD559717       <-- TAAACTCCTTCACCCCTGCTGCTTGTTCCTCACCTTTCTTTCCCCATATC
FD965423       <-- TAAACTCCTTCACCCCTGCTGCTTGTTCCTCACCTTTCTTTCCCCATATC
EY914664       <-- TAAACTCATTCACCCCTGCTGCTTGTTCCTCACCTTTCTTTCCCCATATC
FD555747       --> TAAACTCCTTCACCCCTGCTGCTTGTTCCTCACCTTTCTTTCCCCATATC
EV532343       --> TAAACTCCTTCACCCCTGCTGCTTGTTCCTCACCTTTCTTTCCCCATATC
EV532662       --> TAAACTCCTTCACCCCCGCTGCTTGTTCCTCACCTTTCTTTCCCCATATC
EX751596       --> TAAACTC-TTCACCCCTGCTGCTTGTTCCTCACCTTTCTTTCCCCATATC
EX752344       --> ..................................................
EY894380       --> TAAACTCCTTCACCCCTGCTGCTTGTTCCTCACCTTTCTTTCCCCATATC
EY912204       --> TAAACTCCTTCACCCCTGCTGCTTGTTCCTCACCTTTCGTTCCCCATATC
FD555375       --> TAAACTCCTTCACCCCTGCTGCTTGTTCCTCACCTTTCTTTCCCCATATC
FD961166       --> ..................................................
FY437026       --> ..................................................
EY910664       --> TAAACTCATTCACCCCTGCTGCTTGTTCCTCACCTTTCTTTCCCCATATC
EY933883       --> TAAACTCCTTCACCCCTGCTGCTTGTTCCTCACCTTTCTTTCCCCATATC

               501    -    551
UN18609        --> TTGAATTGGGCATCACTAAACTTCTTGTCCACGAAATCAGCCCAAAACCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX748410       <-- ..................................................
EY916535       <-- TTGAATTGGGCATCACTAAACTTCTTGTCCACGAAATCAGCCCAAAACCT
FD535732       <-- TTGAATTGGGCATCACTAAACTTCTTGTCCACGAAATCAGCCCAAAACCT
EV528312       <-- TTGAATTGGGCATCACTAAACTTCTTGTCCACGAAATCAGCCCAAAACCT
EV528759       <-- TTGAATTGGGCATCACTAAACTTCTTGTCCACGAAATCAGCCCAAAACCT
EV565877       <-- TTGAATTGGGCATCACTAAACTTCTTGTCCACGAAATCAGCCCAAAACCT
EY905290       <-- TTGAATTGGGCATCACTAAACTTCTTGTCCACGAAATCAGCCCAAAACCT
EY906376       <-- TTGAATTGGGCATCACTAAACTTCTTGTCCACGAAATCAGCCCAAAACCT
EV567573       <-- TTGAATTGGGCATCACTAAACTTCTTGTCCACGAAATCAGCCCAAAACCT
FD533806       <-- TTGAATTGGGCATCACTAAACTTCTTGTCCACGAAATCAGCCCAAAACCT
FD973213       <-- TTGAATTGG-CATCACTAAACTTCTTGTCCACGAAATCAGCCCAAAACCT
EV528413       <-- TTGAATTGGGCATCACTAAACTTCTTGTCCACGAAATCAGCCCAAAACCT
EX747385       <-- TTGAATTGGGCATCACTAAACTTCTTGTCCACGAAATCAGCCCAAAACCT
EY898277       <-- TTGAATTGGGCATCACTAAACTTCTTGTCCACGAAATCAGCCCAAAACCT
FD560140       <-- TTGAATTGGGCATCACTAAACTTCTTGTCCACGAAATCAGCCCAAAACCT
FD559717       <-- TTGAATTGGGCATCACTAAACTTCTTGTCCACGAAATCAGCCCAAAACCT
FD965423       <-- TTGAATTGGGCATCACTAAACTTCTTGTCCACGAAATCAGCCCAAAACCT
EY914664       <-- TTGAATTGGGCATCACTAAACTTCTTGTCCACGAAATCAGCCCAAAACCT
FD555747       --> TTGAATTGGGCATCACTAAACTTCTTGTCCACGAAATCAGCCCAAAACCT
EV532343       --> TTGAATTGGGCATCACTAAACTTCTTGTCCACGAAATCAGCCCAAAACCT
EV532662       --> TTGAATTGGGCATCACTAAACTTCTTGTCCACGAAATCAGCCCAAAACCT
EX751596       --> TTGAATTGGGCATCACTAAACTTCTTGTCCACGAAATCAGCCCAAAACCT
EX752344       --> ..................................................
EY894380       --> TTGAATTGGGCATCACTAAACTTCTTGTCCACGAAATCAGCCCAAAACCT
EY912204       --> TTGAATTGGGCATCACTAAACTTCTTGTCCACGAAATCAGCCCAAAACCT
FD555375       --> TTGAATTGGGCATCACTAAACTTCTTGTCCACGAAATCAGCCCAAAACCT
FD961166       --> ..................................................
FY437026       --> ..................................................
EY910664       --> TTGAATTGGGCATCACTAAACTTCTTGTCCACGAAATCAGCCCAAAACCT
EY933883       --> TTGAATTGGGCATCACTAAACTTCTTGTCCACGAAATCAGCCCAAAACCT

               551    -    601
UN18609        --> AGCCTGAGCTTTCCCGTAGGGATCAGAAGGGAAGAATGGGTTCTTGTCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX748410       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY916535       <-- AGCCTGAGCTTTCCCGTAAGGATCAGAAGGGAAGAATGGGTTCTTGTCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD535732       <-- AGCCTGAGCTTTCCCGTAGGGATCAGAAGGGAAGAATGGGTTCTTGTCAG  Raphanus raphanistrum subsp. maritimus
EV528312       <-- AGCCTGAGCTTTCCCGTAGGGATCAGAAGGGAAGAATGGGTTCTTGTCAG  Raphanus raphanistrum subsp. maritimus
EV528759       <-- AGCCTGAGCTTTCCCGTAGGGATCAGAAGGGAAGAATGGGTTCTTGTCAG  Raphanus raphanistrum subsp. maritimus
EV565877       <-- AGCCTGAGCTTTCCCGTAGGGATCAGAAGGGAAGAATGGGTTCTTGTCAG  Raphanus raphanistrum subsp. landra
EY905290       <-- AGCCTGAGCTTTCCCGTAAGGATCAGAAGGGAAGAATGGGTTCTTGTCAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY906376       <-- AGCCTGAGCTTTCCCGTAAGGATCAGAAGGGAAGAATGGGTTCTTGTCAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV567573       <-- AGCCTGAGCTTTCCCGTAGGGATCAGAAGGGAAGAATGGGTTCTTGTCAG  Raphanus raphanistrum subsp. landra
FD533806       <-- AGCCTGAGTTTTCCCGTAGGGATTAGAAGGGAAGAATGGGTTCTTGTCAG  Raphanus raphanistrum subsp. maritimus
FD973213       <-- AGCCTGAGCTTTCCCGTAAGGATCAGAAGGGAAGAATGGGTTCTTGTCAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV528413       <-- AGCCTGAGCTTTCCCGTAGGGATCAGAAGGGAAGAATGGGTTATTGTCAG  Raphanus raphanistrum subsp. maritimus
EX747385       <-- AGCCTGAGCTTTCCCGTAGGGATCAGAAGGGAAGAATGGGTTCTTGTCAG  Raphanus raphanistrum subsp. maritimus
EY898277       <-- AGCCTGAGCTTTCCCGTAGGGATCAGGAGGGAAGAATGGGTTCTTGTCAG  Raphanus raphanistrum subsp. maritimus
FD560140       <-- AGCCTGAGCTTTCCCGTAGGGATCAGAAGGGAAGAATGGGTTCTTGTCAG  Raphanus raphanistrum subsp. landra
FD559717       <-- AGCCTGAGCTTTCCCGTAGGGATCAGAAGGGAAGAATGGGTTCTTGTCAG  Raphanus raphanistrum subsp. landra
FD965423       <-- AGCCTGAGCTTTCCCGTAGGGATCAGAAGGGAAGAATGGGTTCTTGTCAG  Raphanus raphanistrum subsp. maritimus
EY914664       <-- AGCCTGAGCTTTCCCGTAAGGATCAGAAGGGAAGAATGGGTTCTTGTCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD555747       --> AGCCTGAGCTTTCCCGTAGGGATCAGAAGGGAAGAATGGGTTCTTGTCAG  Raphanus raphanistrum subsp. landra
EV532343       --> AGCCTGAGCTTTCCCGTAGGGATCAGAAGGGAAGAATGGGTTCTTGTCAG  Raphanus raphanistrum subsp. maritimus
EV532662       --> AGCCTGAGCTTTCCCGTAGGGATCAGAAGGGAAGAATGGGTTCTTGTCAG  Raphanus raphanistrum subsp. maritimus
EX751596       --> AGCCTGAGCTTTCCCGTAGGGATCAGAAGGGAAGAATGGGTTCTTGTCAG  Raphanus raphanistrum subsp. maritimus
EX752344       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY894380       --> AGCCTGAGCTTTCCCGTAGGG.............................  Raphanus raphanistrum subsp. maritimus
EY912204       --> AGCCTGAGCTTTCCCGTAAGGATCAGAAGGGAAGAATGGGTTCTTGTCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD555375       --> AGCCTGAGCTTTCCCGTAGGGATCAGAAGGGAAGAATGGGTTCTTGTCAG  Raphanus raphanistrum subsp. landra
FD961166       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FY437026       --> ..................................................  Raphanus sativus cv GSK3-1
EY910664       --> AGCCTGAGCTTTCCCGTAAGGATCAGAAGGGAAGAATGGGTTCTTGTCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY933883       --> AGCCTGAGCTTTCCCGTATGGA............................  Raphanus sativus cv Early Scarlet Globe

               601    -    651
UN18609        --> ACCAAGCCTCGTCCACGTACTGGACAACATTGAGAGACTCGCATACTGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX748410       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY916535       <-- ACCAAGCCTCGTCCACGTACTGGACAACGTTGAGAGACTCGCATACTGGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD535732       <-- ACCAAGCCTCGTCCACGTACTGGACAACATTGAGAGACTCGCATACTGGT  Raphanus raphanistrum subsp. maritimus
EV528312       <-- ACCAAGCCTCGTCCACGTACTGGACAACATCGAGAGACTCGCATACTGGT  Raphanus raphanistrum subsp. maritimus
EV528759       <-- ACCAAGCCTCGTCCACGTACTGGACAACATTGAGAGACTCGCATACTGGT  Raphanus raphanistrum subsp. maritimus
EV565877       <-- ACCAAGCCTCGTCCACGTACTGGACAACATTGAGAGACTCGTATACTGGT  Raphanus raphanistrum subsp. landra
EY905290       <-- ACCAAGCCTCGTCCACGTACTGGACAACGTTGAGAGACTCGCATACTGGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY906376       <-- ACCAAGCCTCGTCCACGTACTGGACAACGTTGAGAGACTCGCATACTGGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV567573       <-- ACCAAGCCTCGTCCACGTACTGGACAACATTGAGAGACTCGTATACTGGT  Raphanus raphanistrum subsp. landra
FD533806       <-- ACCAAGCCTCGTCCACGTACTGGACGACATTGAGAGACTCGCATACTGGT  Raphanus raphanistrum subsp. maritimus
FD973213       <-- ACCAAGCCTCGTCCACGTACTGGACAACGTTGAGAGACTCGCATACTGGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV528413       <-- ACCAAGCCTCGTCCACGTACTGGACAACATTGAGAGACTCGCATACTGGT  Raphanus raphanistrum subsp. maritimus
EX747385       <-- ACCAAGCCTCATCCACGTACTGGACAACATTGAGAGACTCGCATACTGGT  Raphanus raphanistrum subsp. maritimus
EY898277       <-- ACCAAGCCTCGTCCACGTACTGGACAACATTGAGAGACTCGCATACTGGT  Raphanus raphanistrum subsp. maritimus
FD560140       <-- ACCAAGCCTCGTCCACGTACTGGACAACATTGAGAGACTCGCATACTGGT  Raphanus raphanistrum subsp. landra
FD559717       <-- ACCAAGCCTCGTCCACGTACTGGACAACATTGAGAGACTCGCATACTGGT  Raphanus raphanistrum subsp. landra
FD965423       <-- ACCAAGCCTCGTCCACGTACTGGACAACATTGAGAGACTCGCATACTGGT  Raphanus raphanistrum subsp. maritimus
EY914664       <-- ACCAAGCCTCGTCCACGTACTGGACAACGTTGAGAGACTCGCATACTGGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD555747       --> ACCAAGCCTCGTCCACGTACTGGACAACATTGAGAGACTCGCATACTGGT  Raphanus raphanistrum subsp. landra
EV532343       --> ACCAAGCCTCGTCCACGTACTGGACAACATCGAGAGACTCGCATACTGGT  Raphanus raphanistrum subsp. maritimus
EV532662       --> ACCAAGCCTCGTCCACGTACTGGACAACATTGAGAGACTCGCATACTGGT  Raphanus raphanistrum subsp. maritimus
EX751596       --> ACCAAGCCTCATCCACGTACTGGACAACATTGAGAGACTCGCATACTGGT  Raphanus raphanistrum subsp. maritimus
EX752344       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY894380       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY912204       --> ACCAAGCCTCGTCCACGTACTGGACAACGTTGAGAGACTCGCATACTGGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD555375       --> ACCAAGCCTCGTCCACGTACTGGACAACATTGAGAGACTCGCATACTGGT  Raphanus raphanistrum subsp. landra
FD961166       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FY437026       --> ..................................................  Raphanus sativus cv GSK3-1
EY910664       --> ACCAAGCCTCGTCCACGTACTGGACAACGTTGAGAGACTCGCATACTGGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY933883       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               651    -    701
UN18609        --> TTACCGTTGTGGATCAGAACCGGAACCTTCTTATGAATCGGATTACTTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX748410       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY916535       <-- TTACCGTTGTGTATCAGAACCGGGACCTTCTTgc................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD535732       <-- TTACCGTTGTGGATCAGAACCGGAACCTTCTTATGAATCGGATTACTTTG  Raphanus raphanistrum subsp. maritimus
EV528312       <-- TTACCGTTGTGGATCAGAACCGGAACCTTCTTATGAATCGGATTACTTTG  Raphanus raphanistrum subsp. maritimus
EV528759       <-- TTACCGTTGTGGATCAGAACCGGAACCTTCTTATGAATCGGATTACTTTG  Raphanus raphanistrum subsp. maritimus
EV565877       <-- TTACCGTTGTGGATCAGAACCGGAACCTTCTTATGAATCGGATTACTTTG  Raphanus raphanistrum subsp. landra
EY905290       <-- TTACCGTTGTGTATCAGAACCGGGACCTTCTTGTGAATCGGATTACTTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY906376       <-- TTACCGTTGTGGATCAGAACCGGGACCTTCTTGTGAATCGGATTACTTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV567573       <-- TTACCGTTGTGGATCAGAACCGGAACCTTCTTATGAATCGGATTACTTTG  Raphanus raphanistrum subsp. landra
FD533806       <-- TTACCGTTGTGGATCAGAACCGGAACCTTCTTATGAATCGGATTACTTTG  Raphanus raphanistrum subsp. maritimus
FD973213       <-- TTACCGTTGTGTATCAGAACCGGGACCTTCTTGTGAATCGGATTACTTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV528413       <-- TTACCGATGTGGATCAGAACCGGAACCTTCTTATGAATCGGATTACTTTG  Raphanus raphanistrum subsp. maritimus
EX747385       <-- TTACCGTTGTGGATCAGAACCGGAACCTTCTTATGAATCGGATTACTTTG  Raphanus raphanistrum subsp. maritimus
EY898277       <-- TTACCGTTGTGGATCAGAACCGGAACCTTCTTATGAATCGGATTACTTTG  Raphanus raphanistrum subsp. maritimus
FD560140       <-- TTACCGTTGTGGATCAGAACCGGAACCTTCTTATGAATCGGATTACTTTG  Raphanus raphanistrum subsp. landra
FD559717       <-- TTACCGTTGTGGATCAGAACCGGAACCTTCTTATGAATCGGATTACTTTG  Raphanus raphanistrum subsp. landra
FD965423       <-- TTACCGTTGTGGATCAGAAACGGAACCTTCTTATGAATCGGATTACTTTG  Raphanus raphanistrum subsp. maritimus
EY914664       <-- TTACCATTGTGTATCAGAACCGGGACCTTCTTGTGAATCGGATTACTTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD555747       --> TTACCGTTGTGGATCAGAACCGGAACCTTCTTATGAATCGGATTACTTTG  Raphanus raphanistrum subsp. landra
EV532343       --> TTACCGTTGTGGATCAGAACCGGAACCTTCTTATGAATCGGATTACTTTG  Raphanus raphanistrum subsp. maritimus
EV532662       --> TTACCGTTGTGGATCAGAACCGGAACCTTCTTATGAATCGGATTACTTTG  Raphanus raphanistrum subsp. maritimus
EX751596       --> TTACCGTTGTGGATCAGAACCGGAACCTTCTTATGAATCGGATTACTTTG  Raphanus raphanistrum subsp. maritimus
EX752344       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY894380       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY912204       --> TTACCGTTGTGTATCAGAACCGGGACCTTCTTgc................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD555375       --> TTACCGTTGTGGATCAGAACCGGAACCTTCTTATGAATCGGATTACTTTG  Raphanus raphanistrum subsp. landra
FD961166       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FY437026       --> ..................................................  Raphanus sativus cv GSK3-1
EY910664       --> TTACCATTGTGTATCAGAACCGGGACCTTCTTGTGAATCGGATTACTTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY933883       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               701    -    751
UN18609        --> GAGGAGCAAAGGGCTCTTGTTCGCGAGATCCTCTTCTCTGGCCTCGAACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX748410       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY916535       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD535732       <-- GAGGAGCAAAGGGCTCTTGTTCGCGAGATCCTCTTCTCTGGCCTCGAACT  Raphanus raphanistrum subsp. maritimus
EV528312       <-- GAGGAGCAAAGGGCTCTTGTTCGCGAGATCCTCTTCTCTGGCCTCGAACT  Raphanus raphanistrum subsp. maritimus
EV528759       <-- GAGGAACAAAGGGCTCTTGTTCGCGAGATCCTCTTCTCTGGCCTCGAACT  Raphanus raphanistrum subsp. maritimus
EV565877       <-- GAGGAGCAAAGGGCTCTTGTTCGCGAGATCCTCTTCTCTGGCCTCGAACT  Raphanus raphanistrum subsp. landra
EY905290       <-- GAGGAGCAAAGGGCTCTTGTTCGTGAGATCCTCTTCTCTGGCCTCGAACA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY906376       <-- GAGGAGCAAAGGGCTCTTGTTCGTGAGATCCTCTTCTCTGGCCTCGAACA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV567573       <-- GAGGAGCAAAGGGCTCTTGTTCGCGAGATCCTCTTCTCTGGCCTCGAACT  Raphanus raphanistrum subsp. landra
FD533806       <-- GAGGAGCAAAGGGCTCTTGTTCGCGAGATCCTCTTCTCTGGCCTCGAACT  Raphanus raphanistrum subsp. maritimus
FD973213       <-- GAGGAGCAAAGGGCTCTTGTTCGTGAGATCCTCTTCTCTGGCCTCGAACA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV528413       <-- GAGGAGCAAAGGGCTCTTGTTCGCGAGATCCTCTTCTCTGGCCTCGAACT  Raphanus raphanistrum subsp. maritimus
EX747385       <-- GAGGAGCAAAGGGCTCTTGTTCGCGAGATCCTCTTCTCTGGCCTCGAACT  Raphanus raphanistrum subsp. maritimus
EY898277       <-- GAGGAGCAAAGGGCTCTTGTTCGCGAGATCCTCTTCTCTGGCCTCGAACT  Raphanus raphanistrum subsp. maritimus
FD560140       <-- GAGGAGCAAAGGGCTCTTGTTCGCGAGATCCTCTTCTCTGGCCTCGAACT  Raphanus raphanistrum subsp. landra
FD559717       <-- GAGGAGCAAAGGGCTCTTGTTCGCGAGATCCTCTTCTCTGGCCTCGAACT  Raphanus raphanistrum subsp. landra
FD965423       <-- GAGGAGCAAAGGGCTCTTGTTCGCGAGATCCTCTTCTCTGGCCTCGAACT  Raphanus raphanistrum subsp. maritimus
EY914664       <-- GAGGAGCAAAGGGCTCTTGTTCGTGAGATCCTCTTCTCTGGCCTCGAACA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD555747       --> GAGGAGCAAAGGGCTCTTGTTCGCGAGATCCTCTTCTCTGGCCTCGAACT  Raphanus raphanistrum subsp. landra
EV532343       --> GAGGAGCAAAGGGCTCTTGTTCGCGAGATCCTCTTCTCTGGCCTCGAACT  Raphanus raphanistrum subsp. maritimus
EV532662       --> GAGGAACAAAGGGCTCTTGTTCGCGAGATCCTCTTCTCTGGCCTCGAACT  Raphanus raphanistrum subsp. maritimus
EX751596       --> GAGGAGCAAAGGGCTCTTGTTCGCGAGATCCTCTTCTCTGGCCTCGAACT  Raphanus raphanistrum subsp. maritimus
EX752344       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY894380       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY912204       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD555375       --> GAGGAGCAAAGGGCTCTTGTTCGCGAGATCCTCTTCTCTGGCCTCGAACT  Raphanus raphanistrum subsp. landra
FD961166       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FY437026       --> ..................................................  Raphanus sativus cv GSK3-1
EY910664       --> GAGGAGCAAAGGGCTCTTGTTCGTGAGATCCTCTTCTCTGGCCTCGAACA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY933883       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               751    -    801
UN18609        --> CCACACCTTTCTCCCTCAACGCGACTCTAGCCCTCATACAGAACATGCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX748410       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY916535       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD535732       <-- CCACACCTTTCTCCCTCAACGCGACTCTAGCCCTCATACAGAACATGCTT  Raphanus raphanistrum subsp. maritimus
EV528312       <-- CCACACCTTTCTCCCTCAACGCGACTCTAGCCCTCATACAGAACATGCTT  Raphanus raphanistrum subsp. maritimus
EV528759       <-- CCACACCTTTCTCCCTCAACGCGACTCTGGCCCTCATACAGAACATGCTT  Raphanus raphanistrum subsp. maritimus
EV565877       <-- CCACACCTTTCTCCCTCAACGCGACTCTAGCCCTCATACAGAACATGCTT  Raphanus raphanistrum subsp. landra
EY905290       <-- CAACACCTTTCTCCCTCAACGCGACTCTAGCCCTCATACAGAACATGCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY906376       <-- CAACACCTTTCTCCCTCAACGCGACTCTAGCCCTCATACAGAACATGCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV567573       <-- CCACACCTTTCTCCCTCAACGCGACTCTAGCCCTCATACAGAACATGCTT  Raphanus raphanistrum subsp. landra
FD533806       <-- CCACACCTTTCTCCCTCAACGCGACTCTAGCCCTCATACAGAACATGCTT  Raphanus raphanistrum subsp. maritimus
FD973213       <-- CAACACCTTTCTCCCTCAACGCGACTCTAGCCCTCATACAGAACATGCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV528413       <-- CCACACCTTTCTCCCTCAACGCGACTCTAGCCCTCATACAGAACATGCTT  Raphanus raphanistrum subsp. maritimus
EX747385       <-- CCACATCTTTCTCCCTCAACGCGACTCTAGCCCTCATACAGAACATGCTT  Raphanus raphanistrum subsp. maritimus
EY898277       <-- CCACACCTTTCTCCCTCAACGCGACTCTAGCCCTCATACAGAACATGCTT  Raphanus raphanistrum subsp. maritimus
FD560140       <-- CCACACCTTTCTCCCTCAACGCGACTCTAGCCCTCATACAGAACATGCTT  Raphanus raphanistrum subsp. landra
FD559717       <-- CCACACCTTTCTCCCTCAACGCGACTCTAGCCCTCATACAGAACATGCTT  Raphanus raphanistrum subsp. landra
FD965423       <-- CCACACCTTTCTCCCTCAACGCGACTCTAGCCCTCATACAGAACATGATT  Raphanus raphanistrum subsp. maritimus
EY914664       <-- CAACACCTTCCTCCCTCAACGCGACTCTAGCCCTCATACAGAACATGCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD555747       --> CCACACCTTTCTCC-TCAACGCGACTCTAG....................  Raphanus raphanistrum subsp. landra
EV532343       --> CCACACCTTTCTCCCTCAACGCGACTCTAGCCCTCATACAGAACATGCTT  Raphanus raphanistrum subsp. maritimus
EV532662       --> CCACACCTTTCTCCCTCAACGCGACTCTGGCCCTCATACAGAACATGCTT  Raphanus raphanistrum subsp. maritimus
EX751596       --> CCACATCTTTCTCCCTCAACGCGACTCTAGCCCTCATACAGAACATG...  Raphanus raphanistrum subsp. maritimus
EX752344       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY894380       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY912204       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD555375       --> CCACACCTTTCTCCCTCAACGCGACTCTAGCCCTCATACAGAACATG...  Raphanus raphanistrum subsp. landra
FD961166       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FY437026       --> ..................................................  Raphanus sativus cv GSK3-1
EY910664       --> CAACACCTTCCTCCCTCAACGCGACTCTAGCCCTCATACAGAACATGCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY933883       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               801    -    851
UN18609        --> GGCCAGTAATCAAGAAGAATCGTCGAGTTCGCCATTGGTTTTACAAAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX748410       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY916535       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD535732       <-- GGCCAGTAATCAAGAAGAATCGTCGAGTTCGCCATTGGTTTTACAAAGAA  Raphanus raphanistrum subsp. maritimus
EV528312       <-- GGCCAGTAATCAAGAAGAATCGTCGAGTTCGCCATTGGTTTTACAAAGAA  Raphanus raphanistrum subsp. maritimus
EV528759       <-- GGCCAGTAATCAAGAAGAATCGTCGAGTTCGCCATTGGTTTTACAAAGAA  Raphanus raphanistrum subsp. maritimus
EV565877       <-- GGCCAGTAATCAAGAAGAATCGTCGAGTTCGCCATTGGTTTTACAAAGAA  Raphanus raphanistrum subsp. landra
EY905290       <-- GGCCAGTAATCAAGAAGAATCGTCGAGTTCGCCATTGGTCTTACAAAGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY906376       <-- GGCCAGTAATCAAGAAGAATCGTCGAGTTCGCCATTGGTCTTACAAAGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV567573       <-- GGCCAGTAATCAAGAAGAATCGTCGAGTTCGCCATTGGTTTTACAAAGAA  Raphanus raphanistrum subsp. landra
FD533806       <-- GGCCAGTAATCAAGAAGAATCGTCGAGTTCGCCATTGGTTTTACAAAGAA  Raphanus raphanistrum subsp. maritimus
FD973213       <-- GGCCAGTAATCAAGAAGAATCGTCGAGTTCGCCATTGGTCTTACAAAGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV528413       <-- GGCCAGTAATCAAGAAGAATCGTCGAGTTCGCCATTGGTTTTACAAAGAA  Raphanus raphanistrum subsp. maritimus
EX747385       <-- GGCCAGTAATCAAGAAGAATCGTCGAGTTCGCCATTGGTTTTACAAAGAA  Raphanus raphanistrum subsp. maritimus
EY898277       <-- GGCCAGTAATCAAGAAGAATCGTCGAGTTCGCCActcc............  Raphanus raphanistrum subsp. maritimus
FD560140       <-- GGCCAGTAATCAAGAAGAATCGTCGAGTTCGCCATTGGTTTTACAAAGAA  Raphanus raphanistrum subsp. landra
FD559717       <-- GGCCAGTAATCAAGAAGAATCGTCGAGTTCGCCATTGGTTTTACAAAGAA  Raphanus raphanistrum subsp. landra
FD965423       <-- GGCCAGTAATCAAGAAGAATCGTCGAGTTCGCCATTcc............  Raphanus raphanistrum subsp. maritimus
EY914664       <-- GGCCAGTAATCAAGAAGAATCGTCGAGTTCGCCATTGGTCTTACAAAGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD555747       --> ..................................................  Raphanus raphanistrum subsp. landra
EV532343       --> GGCCAGTAATCAAGAAGAATCGTCGAGTTCGCCATTGGTTTTACAAAGAA  Raphanus raphanistrum subsp. maritimus
EV532662       --> GGCCAGTAATCAAGAAGAATCGTCGAGTTCGCCATTGGT...........  Raphanus raphanistrum subsp. maritimus
EX751596       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX752344       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY894380       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY912204       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD555375       --> ..................................................  Raphanus raphanistrum subsp. landra
FD961166       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FY437026       --> ..................................................  Raphanus sativus cv GSK3-1
EY910664       --> GGCCAGTAATCAAGAAGAATCGTCGAGTTCGC-ATTGGTCTTACAAAGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY933883       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               851    -    901
UN18609        --> ATGATATGTTCTTGATTTATGTTGAAAGTGAACAATAGAGGCAGTGTGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX748410       <-- ..................................................
EY916535       <-- ..................................................
FD535732       <-- ATGATATGTTCTTGATTTATGTTc..........................
EV528312       <-- ATGATATGTTCTTGATCTATGTTGAAAGTGAACAATAGAGGCAGTGTGTG
EV528759       <-- ATGATATGTTCTTGATTTATGTTGAAAGTGAACAATAGAGGCAGTGTGTG
EV565877       <-- ATGATATGTTCTTGATTTATGTTGAAAGTGAACAATAGAGGCAGTGTGTG
EY905290       <-- ATGATATGTTCTTGATTTATGTTcc.........................
EY906376       <-- ATGATATGTTCTTGATTTATGTTGAAAGTGAACAATAGAGGCAGTGTGTc
EV567573       <-- ATGATATGTTCTTGATTTATGTTGAAAGTGAACAATAGAGGCAGTGTGTG
FD533806       <-- ATGATATGTTCTTGATTTATGTTGAAAGTGAACAATAGAGGCAGTGTGTG
FD973213       <-- ATGATATGTTCTTGATTTcc..............................
EV528413       <-- ATGATATGTTCTTGATTTATGTTGAAAGTGAACAATAGAGGCAGTGTGTG
EX747385       <-- ATGATATGTTCTTGATTTATGTTGAAAGTGAACAATAGAGGCAGTGTGT.
EY898277       <-- ..................................................
FD560140       <-- ATGATATGTTCTTGATTTATGTTGAAAGTGAACAATAGAGGCAGTGTGTG
FD559717       <-- ATGATATGTTCTTGATTTATGTTGAAAGTGAACAATAGAGGCAGTcc...
FD965423       <-- ..................................................
EY914664       <-- ATGATATccc........................................
FD555747       --> ..................................................
EV532343       --> ATGATATGTTCTTGATct................................
EV532662       --> ..................................................
EX751596       --> ..................................................
EX752344       --> ..................................................
EY894380       --> ..................................................
EY912204       --> ..................................................
FD555375       --> ..................................................
FD961166       --> ..................................................
FY437026       --> ..................................................
EY910664       --> ATGATAT...........................................
EY933883       --> ..................................................

               901    -    951
UN18609        --> GTTCCGAAAGGTGCGACC
                   ~~~~~~~~~~~~~~~~~~
EX748410       <-- ..................
EY916535       <-- ..................
FD535732       <-- ..................
EV528312       <-- GTTCC.............
EV528759       <-- GTTCC.............
EV565877       <-- GTTAAGAAAGGTGCGACC
EY905290       <-- ..................
EY906376       <-- c.................
EV567573       <-- GTTAAGAAAGGTGCGACC
FD533806       <-- GTTCC.............
FD973213       <-- ..................
EV528413       <-- GTTCC.............
EX747385       <-- ..................
EY898277       <-- ..................
FD560140       <-- GTTCC.............
FD559717       <-- ..................
FD965423       <-- ..................
EY914664       <-- ..................
FD555747       --> ..................
EV532343       --> ..................
EV532662       --> ..................
EX751596       --> ..................
EX752344       --> ..................
EY894380       --> ..................
EY912204       --> ..................
FD555375       --> ..................
FD961166       --> ..................
FY437026       --> ..................
EY910664       --> ..................
EY933883       --> ..................