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Alignment for radish unigene UN18636

               1      -     51
UN18636        --> CATCGAAACGAAATCTCAAAATTGGGACGAAAATACTATAGAAGAGTAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX897864       <-- CATCGAAACGAAATCTCAAAATTGGGACGAAAATACTATAGAAGAGTAAA
FD551912       <-- ................tttttTTGGGACGAAAATACTATAGAAGAGTAAA
EY941196       <-- .......................GGGACGAAAATACTATAGAAGAGTAAA
EY912862       <-- ..........................................AGAGTAAA
EY941542       <-- ............................................AGTAAA
FD990166       <-- .......................................tttttttTAAA
EY939498       <-- ...............................................AAA
FD990232       <-- ...............................................AAA
EV525878       <-- ...............................................cgA
FD987041       <-- ..................................................
EY897590       <-- ..................................................
EX901545       --> CATCGAAACGAAATCTCAAAATTGGGACGAAAATACTATAGAAGAGTAAA
FD959621       --> ...CGAAACGAAATCTCAAAATTGGGACGAAAATACTATAGAAGAGTAAA
EY936824       --> .......................GGGACGAAAATACTATAGAAGAGTAAA
FD547754       --> .......................GGGACGAAAATACTATAGAAGAGTAAA
EY935424       --> ...............................................AAA
FD985841       --> ...............................................AAA
FD985930       --> ...............................................AAA
EV530503       --> ...............................................cgA
EY937102       --> ..................................................

               51     -    101
UN18636        --> CAAAATCAGTGCATTAAAATCTGAAACTTCAAGATAAAAGGGTAACAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX897864       <-- CAAAATCAGTGCATTAAAATCTGAAACTTCAAGATAAAAGGGTAACAACA
FD551912       <-- CAAAATCAGTGCATTAAAATCTGAAACTTCAAGATAAAAGGGTAACAACA
EY941196       <-- CAAAATCAGTGCATTAAAATCTGAAACTTCAAGATAAAAGGGTAACAACA
EY912862       <-- CAAAATCAGTGCATTAAAATCTGAAACTTCAAGATAAAAGGGTAACAACA
EY941542       <-- CAAAATCAGTGCATTAAAATCTGAAACTTCAAGATAAAAGGGTAACAACA
FD990166       <-- CAAAATCAGTGCATTAAAATCTGAAACTTCAAGATAAAAGGGTAACAACA
EY939498       <-- CAAAATCAGTGCATTAAAATCTGAAACTTCAAGATAAAAGGGTAACAACA
FD990232       <-- CAAAATCAGTGCATTAAAATCTGAAACTTCAAGATAAAAGGGTAACAACA
EV525878       <-- CAAAATCAGTGCATTAAAATCTGAAACTTCAAGATAAAAGGGTAACAACA
FD987041       <-- CAAAATCAGTGCATTAAAATCTGGAACTTCAAGATAAAAGGGTAACAACA
EY897590       <-- ......CAGTGCATTAAAATCTGAAACTTCAAGATAAAAGGGTAACAACA
EX901545       --> CAAAATCAGTGCATTAAAATCTGAAACTTCAAGATAAAAGGGTAACAACA
FD959621       --> CAAAATCAGTGCATTAAAATCTGAAACTTCAAGATAAAAGGGTAACAACA
EY936824       --> CAAAATCAGTGCATTAAAATCTGAAACTTCAAGATAAAAGGGTAACAACA
FD547754       --> CAAAATCAGTGCATTAAAATCTGAAACTTCAAGATAAAAGGGTAACAACA
EY935424       --> CAAAATCAGTGCATTAAAATCTGAAACTTCAAGATAAAAGGGTAACAACA
FD985841       --> CAAAATCAGTGCATTAAAATCTGAAACTTCAAGATAAAAGGGTAACAACA
FD985930       --> CAAAATCAGTGCATTAAAATCTGAAACTTCAAGATAAAAGGGTAACAACA
EV530503       --> CAAAATCAGTGCATTAAAATCTGAAACTTCAAGATAAAAGGGTAACAACA
EY937102       --> ....................................AAAGGGTAACAACA

               101    -    151
UN18636        --> GAGTTTAGGTCTATCAAGAAACATAAACTAGCATAACAAAACACTCTTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX897864       <-- GAGTTTAGGTCTATCAAGAAACATAAACTAGCATAACAAAACACTCTTTA
FD551912       <-- GAGTTTAGGTCTATCAAGAAACATAAACTAGCATAACAAAACACTCTTTA
EY941196       <-- GAGTTTAGGTCTATCAAGAAACATAAACTAGAATAACAAAACACTCTTTA
EY912862       <-- GAGTTTAGGTCTATCAAGAAACATAAACTAGCATAACAAAACACTCTTTA
EY941542       <-- GAGTTTAGGTCTATCAAGAAACATAAACTAGCATAACAAAACACTCTTTA
FD990166       <-- GAGTTTAGGTCTATCAAGAAACATAAACTAGCATAACAAAACACTCTTTA
EY939498       <-- GAGTTTAGGTCTATCAAGAAACATAAACTAGCATAACAAAACACTCTTTA
FD990232       <-- GAGTTTAGGTCTATCAAGAAACATAAACTAGCATAACAAAACACTCTTTA
EV525878       <-- GAGTTTAGGTCTATCAAGAAACATAAACTAGCATAACAAAACACTCTTTA
FD987041       <-- GAGTTTAGGTCTATCAAGAAACATAAGCTAGCATAACAAAACACTCTTTA
EY897590       <-- GAGTTTAGGTCTATCAAGAAACATAAACTAGCATAACAAAACACTCTTTA
EX901545       --> GAGTTTAGGTCTATCAAGAAACATAAACTAGCATAACAAAACACTCTTTA
FD959621       --> GAGTTTAGGTCTATCAAGAAACATAAACTAGCATAACAAAACACTCTTTA
EY936824       --> GAGTTTAGGTCTATCAAGAAACATAAACTAGAATAACAAAACACTCTTTA
FD547754       --> GAGTTTAGGTCTATCAAGAAACATAAACTAGCATAACAAAACACTCTTTA
EY935424       --> GAGTTTAGGTCTATCAAGAAACATAAACTAGCATAACAAAACACTCTTTA
FD985841       --> GAGTTTAGGTCTATCAAGAAACATAAACTAGCATAACAAAACACTCTTTA
FD985930       --> GAGTTTAGGTCTATCAAGAAACATAAACTAGCATAACAAAACACTCTTTA
EV530503       --> GAGTTTAGGTCTATCAAGAAACATAAACTAGCATAACAAAACACTCTTTA
EY937102       --> GAGTTTAGGTCTATCAAAAAACATAAACTAACATAACAAAACACTCTTTA

               151    -    201
UN18636        --> AGCGCCAGTGAAAGCCTTCTTTGCGAAAGCAGAAGCACCAGCTGGTATCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX897864       <-- AGCGCCAGTGAAAGCCTTCTTTGCGAAAGCTGAAGCACCAGCTGGTATCA
FD551912       <-- AGCGCCAGTGAAAGCCTTCTTTGCGAAAGCAGAAGCACCAGCTGGTATCA
EY941196       <-- AGCGCCAGTGAAAGCCTTCTTTGCGAAAGCAGAAGCACCAGCTGGTATCA
EY912862       <-- AGCGCCAGTGAAAGCCTTCTTTGCGAAAGCAGAAGCACCAGCTGGTATCA
EY941542       <-- AGCGCCAGTGAAAGCCTTCTTTGCGAAAGCTGAAGCACCAGCTGGTATCA
FD990166       <-- AGCGCCAGTGAAAGCTTTCTTCGCGAAAGAAGAAGCACCAGCTGGTATCA
EY939498       <-- AGCGCCAGTGAAAGCCTTCTTTGCGAAAGCTGAAGCACCAGCTGGTATCA
FD990232       <-- AGCGCCAGTGAAAGCCTTCTTCGCGAAAGAAGAAGCACCAGCTGGTATCA
EV525878       <-- AGCGCCAGTGAAAGCCTTCTTTGCGGAAGCAGAAGCACCAGCTGGTATCA
FD987041       <-- AGCGCCAGTGAAAGCCTTCTTTGCGAAAGCAGAAGCACCAGCTGGTATCA
EY897590       <-- AGCGCCAGTGAAAGCCTTCTTTGCGAAAGCAGAAGCACCAGCTGGTATCA
EX901545       --> AGCGCCAGTGAAAGCCTTCTTTGCGAAAGCTGAAGCACCAGCTGGTATCA
FD959621       --> AGCGCCAGTGAAAGCCTTCTTTGCGAAAGAAGAAGCACCAGCTGGTATCA
EY936824       --> AGCGCCAGTGAAAGCCTTCTTTGCGAAAGCAGAAGCACCAGCTGGTATCA
FD547754       --> AGCGCCAGTGAAAGCCTTCTTTGCGAAAGCAGAAGCACCAGCTGGTATCA
EY935424       --> AGCGCCAGTGAAAGCCTTCTTTGCGAAAGCTGAAGCACCAGCTGGTATCA
FD985841       --> AGCGCCAGTGAAAGCCTTCTTCGCGAAAGAAGAAGCACCAGCTGGTATCA
FD985930       --> AGCGCCAGTGAAAGCCTTCTTCGCGAAAGAAGAAGCACCAGCTGGTATCA
EV530503       --> AGCGCCAGTGAAAGCCTTCTTTGCGGAAGCAGAAGCACCAGCTGGTATCA
EY937102       --> AGCGCCAGTGAAAGCCTTCTTTGCGAAAGCTGAAGCACCAGCTGGTATCA

               201    -    251
UN18636        --> CCTTCAACACATTGAACCTCACAGTCTTGGACAAAGGCCTGCATTGTCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX897864       <-- CCTTCAACACATTGAACCTCACAGTCTTGGACAAAGGCCTGCATTGTCCA
FD551912       <-- CCTTCAACACATTGAACCTCACAGTCTTGGACAAAGGCCTGCATTGTCCA
EY941196       <-- CCTTCAACACATTGAACCTCACAGTCTTGGACAAAGGCCTGCATTGTCCA
EY912862       <-- CCTTCAACACATTGAACCTCACAGTCTTGGACAAAGGCCTGCATTGTCCA
EY941542       <-- CCTTCAACACATTGAACCTCACAGTCTTGGACAAAGGCCTGCATTGTCCA
FD990166       <-- CTTTCAACACATTGAACCTCACAGTCTTGGACAAAGGCCTGCATTGTCCA
EY939498       <-- CCTTCAACACATTGAACCTCACAGTCTTGGACAAAGGCCTGCATTGTCCA
FD990232       <-- CCTTCAACACATTGAACCTCACAGTCTTGGACAAAGGCCTGCATTGTCCA
EV525878       <-- CCTTCAACACATTGAACCTCACAGTCTTGGACAAAGGCCTGCATTGTCCA
FD987041       <-- CCTTCAACACATTGAACCTCACAGTATTGGACAAAGGCCTGCATTGTCCA
EY897590       <-- CCTTCAACACATTGAACCTCACAGTCTTGGACAAAGGCCTGCATTGTCCA
EX901545       --> CCTTCAACACATTGAACCTCACAGTCTTGGACAAAGGCCTGCATTGTCCA
FD959621       --> CCTTCAACACATTGAACCTCACAGTCTTGGACAAAGGCCTGCATTGTCCA
EY936824       --> CCTTCAACACATTGAACCTCACAGTCTTGGACAAAGGCCTGCATTGTCCA
FD547754       --> CCTTCAACACATTGAACCTCACAGTCTTGGACAAAGGCCTGCATTGTCCA
EY935424       --> CCTTCAACACATTGAACCTCACAGTCTTGGACAAAGGCCTGCATTGTCCA
FD985841       --> CCTTCAACACATTGAACCTCACAGTCTTGGACAAAGGCCTGCATTGTCCA
FD985930       --> CCTTCAACACATTGAACCTCACAGTCTTGGACAAAGGCCTGCATTGTCCA
EV530503       --> CCTTCAACACATTGAACCTCACAGTCTTGGACAAAGGCCTGCATTGTCCA
EY937102       --> CCTTCAACACATTGAACCTCACAGTCTTGGACAAAGGCCTGCATTGTCCA

               251    -    301
UN18636        --> ATGATGACATGGTCTCCTTCCTTGACACGGAAGCAAGGTGAGACATGAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX897864       <-- ATGATGACATGGTCTCCTTCCTTGACACGGAAGCAAGGTGAGACATGAGC
FD551912       <-- ATGATGACATGGTCTCCTTCCTTGACACGGAAGCAAGGTGAGACATGAGC
EY941196       <-- ATGATGACATGGTCTCCTTCCTTGACACGGAAGCAAGGTGAGACATGAGC
EY912862       <-- ATGATGACATGGTCTCCTTCCTTGACACGGAAGCAAGGTGAGACATGAGC
EY941542       <-- ATGATGACATGGTCTCCTTCCTTGACACGGAAGCAAGGTGAGACATGAGC
FD990166       <-- ATGATGACATGGTCTCCTTCCTTGACACGGAAGCAAGGTGAGACATGAGC
EY939498       <-- ATGATGACATGGTCTCCTTCCTTGACACGGAAGCAAGGTGAGGCATGAGC
FD990232       <-- ATGATGACATGGTCTCCTTCCTTGACACGGAAGCAAGGTGAGACATGAGC
EV525878       <-- ATGATGACGTGGTCTCCTTCCTTGACACGGAAGCAAGGTGAGACATGAGC
FD987041       <-- ATGATGACATGGTCTCCTTCCTTGACACGGAAGCAAGGCGAGACATGAGC
EY897590       <-- ATGATGACATGGTCTCCTTCCTTGACACGGAAGCAAGGTGAGACATGAGC
EX901545       --> ATGATGACATGGTCTCCTTCCTTGACACGGAAGCAAGGTGAGACATGAGC
FD959621       --> AAGATGACATGGTCTCCTTCCTTGACACGGAAGCAAGGTGAGACATGAGC
EY936824       --> ATGATGACATGGTCTCCTTCCTTGACACGGAAGCAAGGTGAGACATGAGC
FD547754       --> ATGATGACATGGTCTCCTTCCTTGACACGGAAGCAAGGTGAGACATGAGC
EY935424       --> ATGATGACATGGTCTCCTTCCTTGACACGGAAGCAAGGTGAGGCATGAGC
FD985841       --> ATGATGACATGGTCTCCTTCCTTGACACGGAAGCAAGGTGAGACATGAGC
FD985930       --> ATGATGACATGGTCTCCTTCCTTGACACGGAAGCAAGGTGAGACATGAGC
EV530503       --> ATGATGACGTGGTCTCCTTCCTTGACACGGAAGCAAGGTGAGACATGAGC
EY937102       --> ATGATGACATGGTCTCCTTCCTTGACACGGAAGCAAGGGGAGACATGAGC

               301    -    351
UN18636        --> AGGGATGTTCGAATGCCTCTTCTCATACCTCTGATACTTCTTGACAAAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX897864       <-- AGGGATGTTCGAATGCCTCTTCTCATACCTCTGATACTTCTTGACAAAGT
FD551912       <-- AGGGATGTTCGAATGCCTCTTCTCATACCTCTGATACTTCTTGACAAAGT
EY941196       <-- AGGGATGTTCGAATGCCTCTTCTCATACCTCTGATACTTCTTGACAAAGT
EY912862       <-- AGGGATGTTCGAATGCCTCTTCTCATACCTCTGATACTTCTTGACAAAGT
EY941542       <-- AGGGATGTTCGAATGCCTCTTCTCATACCTCTGATACTTCTCGACAAAGT
FD990166       <-- AGGGATGTTCGAATGCCTCTT---CTACCTCTGATACTTCTTGACAAAGT
EY939498       <-- AGGGATGTTCGAATGCCTCTTCTCATACCTCTGATACTTCTTGACAAAGT
FD990232       <-- AGGGATGTTCGAATGCCTCTT---CTACCTCTGATACTTCTTGACAAAGT
EV525878       <-- AGGGATGTTCGAATGCCTCTTCTCATACCTCTGATACTTCTTGACAAAGT
FD987041       <-- AGGGATGTTCGAATGCCTCTTCTCATACCTCTGATACTTCTTGACAAAGT
EY897590       <-- AGGGATGTTCGAATGCCTCTTCTCATACCTCTGATACTTCTTGACAAAGT
EX901545       --> AGGGATGTTCGAATGCCTCTTCTCATACCTCTGATACTTCTTGACAAAGT
FD959621       --> AGGGATGTTCGAATGCCTCTTCTCATACCTCTGATACTTCTTGACAAAGT
EY936824       --> AGGGATGTTCGAATGCCTCTTCTCATACCTCTGATACTTCTTGACAAAGT
FD547754       --> AGGGATGTTCGAATGCCTCTTCTCATACCTCTGATACTTCTTGACAAAGT
EY935424       --> AGGGATGTTCGAATGCCTCTTCTCATACCTCTGATACTTCTTGACAAAGT
FD985841       --> AGGGATGTTCGAATGCCTCTTCT---ACCTCTGATACTTCTTGACAAAGT
FD985930       --> AGGGATGTTCGAATGCCTCTTCT---ACCTCTGATACTTCTTGACAAAGT
EV530503       --> AGGGATGTTCGAATGCCTCTTCTCATACCTCTGATACTTCTTGACAAAGT
EY937102       --> AGGGATGTTCGAATGCCTCTTCTCATACCTCTGATACTTCTCGACAAAGT

               351    -    401
UN18636        --> GAAGGTAGTTTCTTCGGACGATAATGGTCCTCTGCATTTTGGCCGAGTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX897864       <-- GAAGGTAGTTTC......................................
FD551912       <-- GAAGGTAGTTTCTTCGGACGATAATGGTCCTCTGCATTTTGGCCGAGTGG
EY941196       <-- GAAGGTAGTTTCTTCGGACGATAATGGTCCTCTGCATTTTGGCCGAGTGG
EY912862       <-- GAAGGTAGTTTC......................................
EY941542       <-- GAAGGTAGTTTC......................................
FD990166       <-- GAAGGTAGTTTCTTCGGACGATAATGGTCCTCTGCATTTTGGCCGAGTGG
EY939498       <-- GAAGGTAGTTTCTTCGGACGATAATGGTCCTCTGCATTTTGGCCGAGTGG
FD990232       <-- GAAGGTAGTTTCTTCGGACGATAATGGTCCTCTGCATTTTGGCCGAGTGG
EV525878       <-- GAAGGTAGTTTCTTCGGACGATAATGGTCCTCTGCATTTTGGCCGAGTGG
FD987041       <-- GGAGGTAGTTCCTTCGGACGATAATGGTCCTCTGCATTTTGGCAGAGTGG
EY897590       <-- GAAGGTAGTTTC......................................
EX901545       --> GAAGGTAGTTTC......................................
FD959621       --> GAAGGTAGTTTC......................................
EY936824       --> GAAGGTAGTTTCTTCGGACGATAATGGTCCTCTGCATTTTGGCCGAGTGG
FD547754       --> GAAGGTAGTTTCTTCGGACGATAATGGTCCTCTGCATTTTGGCCGAGTGG
EY935424       --> GAAGGTAGTTTCTTCGGACGATAATGGTCCTCTGCATTTTGGCCGAGTGG
FD985841       --> GAAGGTAGTTTCTTCGGACGATAATGGTCCTCTGCATTTTGGCCGAGTGG
FD985930       --> GAAGGTAGTTTCTTCGGACGATAATGGTCCTCTGCATTTTGGCCGAGTGG
EV530503       --> GAAGGTAGTTTCTTCGGACGATAATGGTCCTCTGCATTTTGGCCGAGTGG
EY937102       --> GAAGGTAGTTTC......................................

               401    -    451
UN18636        --> CAAGTACCAGCTAAGATACGACCTCTAATCGAAACAGTTCCAGTGAAGGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX897864       <-- ..................................................
FD551912       <-- CAAGTACCAGCTAAGATACGACCTCTAATCGAAACAGTTCCAGTGAAGGG
EY941196       <-- CAAGTACCAGCTAAGATACGACCTCTAATCGAAACAGTTCCAGTGAAGGG
EY912862       <-- ..................................................
EY941542       <-- ..................................................
FD990166       <-- CAAGTACCAGCTAAGATACGACCTCTAATCGAAACAGTTCCAGTGAAGGG
EY939498       <-- CAAGTACCAGCTAAGATACGACCTCTAATCGAAACAGTTCCAGTGAAGGG
FD990232       <-- CAAGTACCAGCTAAGATACGACCTCTAATCGAAACAGTTCCAGTGAAGGG
EV525878       <-- CAAGTACCAGCTAAGATACGACCTCTAATCGAAACAGTTCCAGTGAAGGG
FD987041       <-- CAAGTACCCGCTAAGATACGACCTCTAATCGAAACAGTTCCAGTGAAGGG
EY897590       <-- ..................................................
EX901545       --> ..................................................
FD959621       --> ..................................................
EY936824       --> CAAGTACCAGCTAAGATACGACCTCTAATCGAAACAGTTCCAGTGAAGGG
FD547754       --> CAAGTACCAGCTAAGATACGACCTCTAATCGAAACAGTTCCAGTGAAGGG
EY935424       --> CAAGTACCAGCTAAGATACGACCTCTAATCGAAACAGTTCCAGTGAAGGG
FD985841       --> CAAGTACCAGCTAAGATACGACCTCTAATCGAAACAGTTCCAGTGAAGGG
FD985930       --> CAAGTACCAGCTAAGATACGACCTCTAATCGAAACAGTTCCAGTGAAGGG
EV530503       --> CAAGTACCAGCTAAGATACGACCTCTAATCGAAACAGTTCCAGTGAAGGG
EY937102       --> ..................................................

               451    -    501
UN18636        --> ACATTTACTGTCGATGTAGGTTCCTTGAATGGCATCACGAGGAGTCTTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX897864       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD551912       <-- ACATTTACTGTCGATATAGGTTCCTTGAATGGCATCACGAGGAGTCTTGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY941196       <-- ACATTTACTGTCGATATAGGTTCCTTGAATGGCATCACGAGGAGTCTTGA  Raphanus sativus cv Early Scarlet Globe
EY912862       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY941542       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD990166       <-- ACATTTACTGTCGATGTAGGTTCCTTGAATGGCATCACGAGGAGTCTTGA  Raphanus raphanistrum subsp. landra
EY939498       <-- ACATTTACTGTCGATGTAGGTTCCTTGAATGGCATCACGAGGAGTCTTGA  Raphanus sativus cv Early Scarlet Globe
FD990232       <-- ACATTTACTGTCGATGTAGGTTCCTTGAATGGCATCACGAGGAGTCTTGA  Raphanus raphanistrum subsp. landra
EV525878       <-- ACATTTACTGTCGATATAGGTTCCTTGAATGGCATCACGAGGAGTCTTGA  Raphanus raphanistrum subsp. maritimus
FD987041       <-- ACATTTACTGTCGATGTAGGTTCCTTGAATGGCATCACGAGGAGTCTTGA  Raphanus raphanistrum subsp. landra
EY897590       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX901545       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD959621       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY936824       --> ACATTTACTGTCGATATAGGTTCCTTGAATGGCATCACGAGGAGTCTTGA  Raphanus sativus cv Early Scarlet Globe
FD547754       --> ACATTTACTGTCGATATAGGTTCCTTGAATGGCATCACGAGGAGTCTTGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY935424       --> ACATTTACTGTCGATGTAGGTTCCTTGAATGGCATCACGAGGAGTCTTGA  Raphanus sativus cv Early Scarlet Globe
FD985841       --> ACATTTACTGTCGATGTAGGTTCCTTGAATGGCATCACGAGGAGTCTTGA  Raphanus raphanistrum subsp. landra
FD985930       --> ACATTTACTGTCGATGTAGGTTCCTTGAATGGCATCACGAGGAGTCTTGA  Raphanus raphanistrum subsp. landra
EV530503       --> ACATTTACTGTCGATATAGGTTCCTTGAATGGCATCACGAGGAGTCTTGA  Raphanus raphanistrum subsp. maritimus
EY937102       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               501    -    551
UN18636        --> AGCCCAAGCCAATGTTCTTCACGAATCTGTTTCCACCCTTTCCAGGTCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX897864       <-- ..................................................
FD551912       <-- AGCCCAAGCCAATGTTCTTCACGAATCTGTTTCCACCCTTTCCAGGTCTC
EY941196       <-- AGCCCAAGCCAATGTTCTTCACGAATCTGTTTCCACCCTTTCCAGGTCTC
EY912862       <-- ..................................................
EY941542       <-- ..................................................
FD990166       <-- AGCCCAAGCCAATGTTCTTCACGAATCTGTTTCCACCCTTTCCAGGTCTC
EY939498       <-- AGCCCAAGCCAATGTTCTTCACGAATCTGTTTCCACCCTTTCCAGGTCTC
FD990232       <-- AGCCCAAGCCAATGTTCTTCACGAATCTGTTTCCACCCTTTCCAGGTCTC
EV525878       <-- AGCCCAAGCCAATGTTCTTCACGAATCTGTTTCCACCCTTTCCAGGTCTC
FD987041       <-- AGCCCAAGCCAATGTTCTTCACGAATCTGTTTCCACCCTTTCCAGGCCTC
EY897590       <-- ..................................................
EX901545       --> ..................................................
FD959621       --> ..................................................
EY936824       --> AGCCCAAGCCAATGTTCTTCACGAATCTGTTTCCACCCTTTCCAGGTCTC
FD547754       --> AGCCCAAGCCAATGTTCTTCACGAATCTGTTTCCACCCTTTCCAGGTCTC
EY935424       --> AGCCCAAGCCAATGTTCTTCACGAATCTGTTTCCACCCTTTCCAGGTCTC
FD985841       --> AGCCCAAGCCAATGTTCTTCACGAATCTGTTTCCACCCTTTCCAGGTCTC
FD985930       --> AGCCCAAGCCAATGTTCTTCACGAATCTGTTTCCACCCTTTCCAGGTCTC
EV530503       --> AGCCCAAGCCAATGTTCTTCACGAATCTGTTTCCACCCTTTCCAGGTCTC
EY937102       --> ..................................................

               551    -    601
UN18636        --> TTTCCCTTTCCAGATATCTTCGAGCTGAGGAAGACCTTAGGTTGCTTTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX897864       <-- ..................................................
FD551912       <-- TTTCCCTTTCCAGATATCTTCGAGCTGAGGAAGACCTTAGGTTGCTTTAA
EY941196       <-- TTTCCCTTTCCAGATATCTTCGAGCTGAGGAAGACCTTGGGTTGCTTTAG
EY912862       <-- ..................................................
EY941542       <-- ..................................................
FD990166       <-- TTTCCCTTTCCAGATATCTTCGAGCTGAGGAAGACCTTAGGTTGCTTTAG
EY939498       <-- TTTCCCTTTCCAGATATCTTCGAGCTGAGGAAGACCTTAGGTTGCTTTAG
FD990232       <-- TTTCCCTTTCCAGATATCTTCGAGCTGAGGAAGACCTTAGGTTGCTTTAG
EV525878       <-- TTTCCCTTTCCAGATATCTTCGAGCTGAGGAAGACCTTAGGTTGCTTTAA
FD987041       <-- TTTCCCTTTCCAGATATCTTCGAACTGAGGAAGACCTTAGGTTGCTTTAG
EY897590       <-- ..................................................
EX901545       --> ..................................................
FD959621       --> ..................................................
EY936824       --> TTTCCCTTTCCAGATATCTTCGAGCTG.......................
FD547754       --> TTTCCCTTTCCAGATATCTTCGAGCTGAGGAAGACCTTAGGTTGCTTT..
EY935424       --> TTTCCCTTTCCAGATATCTTCGAGCTGAGGAAGACCTTAGGTTGCTTTAG
FD985841       --> TTTCCCTTTCCAGATATCTTCGAGCTGAGGAAGACCTTAGGTTGCTTTAG
FD985930       --> TTTCCCTTTCCAGATATCTTCGAGCTGAGGAAGACCTTAGGTTGCTTTAG
EV530503       --> TTTCCCTTTCCAGATATCTTCGAGCTGAGGAAGACCTTAGGTTGCTTTAA
EY937102       --> ..................................................

               601    -    651
UN18636        --> GAAAGCTTTCTCAGTCTGTTCCGCCATGGCTGCTCTTCTGCTCCCGTGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX897864       <-- ..................................................
FD551912       <-- GAAAGCTTTCTCAGTCTGTTCCGCCATGGCTGCTCTTCTGCTCCCGTGAA
EY941196       <-- GAAAGCTTTCTCAGTCTGTTCCGCCATGGCTGCTCTTCTGCTCCCGTGAA
EY912862       <-- ..................................................
EY941542       <-- ..................................................
FD990166       <-- GAAAGCTTTCTCAGTCTGTTCCGCCATGGCTGCTCTTCTGCTCCCGTGAA
EY939498       <-- GAAAGCTTTCTCAGTCTGTTCCGCCATGGCTGCTCTTCTGCTCCCGTGAA
FD990232       <-- GAAAGCTTTCTCAGTCTGTTCCGCCATGGCTGCTCTTCTGCTCCCGTGAA
EV525878       <-- GAAAGCTTTCTCAGTCTGTTCCGCCATGGCTGCTCTTCTGCTCCCGTGAA
FD987041       <-- GAAAGCTTTCTCAGTCTGTTCCGCCATGGCTGCTCTTCTGCTCCCGTGAA
EY897590       <-- ..................................................
EX901545       --> ..................................................
FD959621       --> ..................................................
EY936824       --> ..................................................
FD547754       --> ..................................................
EY935424       --> GAAAGCTTTCTCAGTCTGTTCCGCCATGGCTGCTCTTCTGCTCCCGTGAA
FD985841       --> GAAAGCTTTCTCAGTCTGTTCCGCCATGGCTGCTCTTCTGCTCCCGTGAA
FD985930       --> GAAAGCTTTCTCAGTCTGTTCCGCCATGGCTGCTCTTCTGCTCCCGTGAA
EV530503       --> GAAAGCTTTCTCAGTCTGTTCCGCCATGGCTGCTCTTCTGCTCCCGTGAA
EY937102       --> ..................................................

               651    -    701
UN18636        --> AGCTTTGAGGCAAAGGATGTAGGCAGCGACGGCTAGAGAGCTCCACGAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX897864       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD551912       <-- AGCTTTGAGGCAAAGGATGTAGGCAGCGACGGCTAGAGAGCccccc....  Raphanus raphanistrum subsp. raphanistrum (NY)
EY941196       <-- AGCTTTGAGGCAA-GGATGTAGGCAGCGACGGCTAGAGAGCTTCACcc..  Raphanus sativus cv Early Scarlet Globe
EY912862       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY941542       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD990166       <-- AGCTTTGAGGCAAAGGATGTAGGCAGCGACGGCTAGAGAGCTCCcc....  Raphanus raphanistrum subsp. landra
EY939498       <-- AGCTTTGAGGCAA-GGATGTAGGCAGCGACGGCTAGAGAGCTCCACGAAA  Raphanus sativus cv Early Scarlet Globe
FD990232       <-- AGCTTTGA..........................................  Raphanus raphanistrum subsp. landra
EV525878       <-- AGCTTTGAGGCAAAGGATGTAGGCAGCGACGGCTAGAGAGCTCCcc....  Raphanus raphanistrum subsp. maritimus
FD987041       <-- AGCTTTGAGGCAA-GGATGTAGGCAGCGACGGCTAGAGAGCTTCACGAAA  Raphanus raphanistrum subsp. landra
EY897590       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX901545       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD959621       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY936824       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD547754       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY935424       --> AGCTTTGAGGCAA-GGATGTAGGCAGCGACGGCTAGAGAGCTCCACGAAA  Raphanus sativus cv Early Scarlet Globe
FD985841       --> AGCTTTGAGGCAAAGGATGTAGGCAGCGACGGCTAGAGAGCTCCcc....  Raphanus raphanistrum subsp. landra
FD985930       --> AGCTTTGAGGCAAAGGATGTAGGCAGCGACGGCTAGAGAGCTCCcc....  Raphanus raphanistrum subsp. landra
EV530503       --> AGCTTTGAGGCAAAGGATGTAGGCAGCGACGGCTAGAGAGCTCCcc....  Raphanus raphanistrum subsp. maritimus
EY937102       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               701    -    751
UN18636        --> GAAAATCC
                   ~~~~~~~~
EX897864       <-- ........
FD551912       <-- ........
EY941196       <-- ........
EY912862       <-- ........
EY941542       <-- ........
FD990166       <-- ........
EY939498       <-- GAAAATCC
FD990232       <-- ........
EV525878       <-- ........
FD987041       <-- GAcc....
EY897590       <-- ........
EX901545       --> ........
FD959621       --> ........
EY936824       --> ........
FD547754       --> ........
EY935424       --> GAAAATCC
FD985841       --> ........
FD985930       --> ........
EV530503       --> ........
EY937102       --> ........