RadishBase

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Alignment for radish unigene UN18657

               1      -     51
UN18657        --> GGGTCGATCGTATCGTATCTGTTCCTTGTTGTTGTTTCGAGTTTCCGACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD546963       <-- ..............................GTTGTTTCGAGTTTCCGACA
EY894737       <-- ....................................ggGAGTTTCCGACA
EY902531       <-- ....................................ggGAGTTTCCGACA
FD530017       <-- ....................................ggGAGTTTCCGACA
EV544469       <-- ...............................................ggA
EY911288       <-- ...............................................ggA
EX769446       <-- ..................................................
EX909843       <-- ..................................................
FD983619       <-- ..................................................
FD977272       <-- ..................................................
EY934717       <-- ..................................................
FD959897       <-- ..................................................
EY938631       --> GGGTCGATCGTATCGTATCTGTTCCTTGTTGTTGTTTCTAGTTTCCGACA
FD532409       --> GGGTCGATCGTATCGTATCTGTTCCTTGTTGTTGTTTCGAGTTTCCGACA
FD551094       --> .......ggGTATCGTATCTGTTCCTTGTTGTTGTTTCGAGTTTCCGACA
FD961924       --> .......ggGTATCGTATCTGTTCCTTGTTGTTGTTTCGAGTTTCCGACA
FD962415       --> .......ggGTATCGTATCTGTTCCTTGTTGTTGTTTCGAGTTTCCGACA
FD981530       --> .......ggGTATCGTATCTGTTCCTTGTTGTTGTTTCGAGTTTCCGACA
FD978336       --> ........gggATCGTATCTGTTCCTTGTTGTTGTT-CGAGTTTCCGACA
EW716142       --> ............ggGTATCTGTTCCTTGTTGTTGTTTCGAGTTTCCGACA
EW724181       --> ............................TTGTTGTTTCGAGTTTCCGACA
FD562779       --> ............................ggGTTGTTTCGAGTTTCCGACA
EY898784       --> ....................................ggGAGTTTCCGACA
EY906324       --> ....................................ggGAGTTTCCGACA
FD987595       --> .........................................ggTCCGACA
EV548874       --> ...............................................ggA
EX746611       --> ...............................................ggA
EY915441       --> ...............................................ggA
EX906269       --> ..................................................

               51     -    101
UN18657        --> TCGATCGAGAGAGACAAAGAGGACAGCGATGGCATTGACGGTGGCGAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD546963       <-- TCGATCGAGAGAGACAAAGAGGACAGCGATGGCATTGACGGTGGCGAAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY894737       <-- TCGATCGAGAGAGACAAAGAGGACAGCGATGGCATTGACGGTGGCGAAGA  Raphanus raphanistrum subsp. maritimus
EY902531       <-- TCGATCGAGAGAGACAGAGAGGAGAGCGATGGCATTGACGGTGGCGAAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD530017       <-- TCGATCGAGAGAGACAAAGAGGACAGCGATGGCATTGACGGTGGCGAAGA  Raphanus raphanistrum subsp. maritimus
EV544469       <-- TCGAACGATCGAGACAGAGAGGAGAGCGATGGCATTGACGGTGGCGAAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY911288       <-- TCGAACGATCGAGACAGAGAGGAGAGCGATGGCATTGACGGTGGCGAAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX769446       <-- ......ggGAGAGACAAAGAGGACAGCGATGGCATTGACGGTGGCGAAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX909843       <-- ......ggGAGAGACAAAGAGGACAGCGATGGCATTGACGGTGGCGAAGA  Raphanus sativus cv Rat-Tail Radish #3870
FD983619       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD977272       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY934717       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD959897       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY938631       --> TCGATCGAGAGAGACAAAGAGGACAG-GATGGCATTGACGGTGGCGAAGA  Raphanus sativus cv Early Scarlet Globe
FD532409       --> TCGATCGAGAGAGACAAAGAGGACAGCGATGGCATTGACGGTGGCGAAGA  Raphanus raphanistrum subsp. maritimus
FD551094       --> TCGATCGAGAGAGACAAAGAGGACAGCGATGGCATTGACGGTGGCGAAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD961924       --> TCGATCGAGAGAGACAAAGAGGACAGCGATGGCATTGACGGTGGCGAAGA  Raphanus raphanistrum subsp. maritimus
FD962415       --> TCGATCGAGAGAGACAAAGAGGACAGCGATGGCATTGACGGTGGCGAAGA  Raphanus raphanistrum subsp. maritimus
FD981530       --> TCGATCGAGAGAGACAAAGAGGACAGCGATGGCATTGACGGTGGCGAAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD978336       --> TCGATCGAGAGAGACAAAGAGGACAGCGATGGCATTGACGGTGGCGAAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW716142       --> TCGATCGAGAGAGACAAAGAGGACAGCGATGGCATTGACGGTGTCGAAGA  Raphanus sativus var. oleiformis
EW724181       --> TCGATCGAGAGAGACAAAGAGGACAGCGATGGCATTGACGGTGGCGAAGA  Raphanus sativus cv Early Scarlet Globe
FD562779       --> TCGATCGAGAGAGACAAAGAGGACAGCGATGGCATTGACGGTGGCGAAGA  Raphanus sativus var. oleiformis
EY898784       --> TCGATCGAGAGAGACAAAGAGGACAGCGATGGCATTGACGGTGGCGAAGA  Raphanus raphanistrum subsp. maritimus
EY906324       --> TCGATCGAGAGAGACAGAGAGGAGAGCGATGGCATTGACGGTGGCGAAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD987595       --> TCGAACGATCGAGACAGAGAGGAGAGCGATGGCATTGACGGTGGCGAAGA  Raphanus raphanistrum subsp. landra
EV548874       --> TCGAACGATCGAGACAGAGAGGAGAGCGATGGCATTGACGGTGGCGAAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX746611       --> TCGATCGAGAGAGACAAAGAGGACAGCGATGGCATTGACGGTGGCGAAGA  Raphanus raphanistrum subsp. maritimus
EY915441       --> TCGAACGATCGAGACAGAGAGGAGAGCGATGGCATTGACGGTGGCGAAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX906269       --> ......ggGAGAGACAAAGAGGACAGCGATGGCATTGACGGTGGCGAAGA  Raphanus sativus cv Rat-Tail Radish #3870

               101    -    151
UN18657        --> GTGCGTTGGAGGCGATTAGAGAGAAAGGTCTCGGAGGCTTCCTCAGGATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD546963       <-- GTGCGTTGGAGGCGATTAGAGAGAAAGGTCTCGGAGGCTTCCTCAGGATG
EY894737       <-- GTGCGTTGGAGGCGATTAGAGAGAAAGGTCTCGGAGGCTTCCTCAGGATG
EY902531       <-- GTGCGTTGGAGGCGATTAGAGAGAAAGGTCTCGGAGGCTTCCTCAGGATG
FD530017       <-- GTGCGTTGGAGGCGATTAGAGAGAAAGGTCTCGGAGGCTTCCTCAGGATG
EV544469       <-- GTGCGATGGAGGCGATTAGAGAGAAAGGTCTCGGAGGCTTCCTCAGGATG
EY911288       <-- GTGCGATGGAGGCGATTAGAGAGAAAGGTCTCAGAGGCTTCCTCAGGATG
EX769446       <-- GTGCGTTGGAGGCGATTAGAGAGAAAGGTCTCGGAGGCTTCCTCAGGATG
EX909843       <-- GTGCGTTGGAGGCGATTAGAGAGAAAGGTCTCGGAGGCTTCCTCAGGATG
FD983619       <-- ..............................TCGGAGGCTTCCTCAGGATG
FD977272       <-- ..................................................
EY934717       <-- ..................................................
FD959897       <-- ..................................................
EY938631       --> GTGCGATGGAGGCGATTAGAGAGAAAGGTCTCGGAGGTTTCCTCAGGATG
FD532409       --> GTGCGTTGGAGGCGATTAGAGAGAAAGGTCTCGGAGGCTTCCTCAGGATG
FD551094       --> GTGCGTTGGAGGCGATTAGAGAGAAAGGTCTCGGAGGCTTCCTCAGGATG
FD961924       --> GTGCGTTGGAGGCGATTAGAGAGAAAGGTCTCGGAGGCTTCCTCAGGATG
FD962415       --> GTGCGTTGGAGGCGATTAGAGAGAAAGGTCTCGGAGGCTTCCTCAGGATG
FD981530       --> GTGCGTTGGAGGCGATTAGAGAGAAAGGTCTCGGAGGCTTCCTCAGGATG
FD978336       --> GTGCGATGGAGGCGATTAGAGAGAAAGGTCTCGGAGGTTTCCTCAGGATG
EW716142       --> GTGCGTTGGAGGCGATTAGAGAGAAAGGTCTCGGAGGCTTCCTCAGGATG
EW724181       --> GTGCGTTGGAGGCGATTAGAGAGAAAGGTCTCGGAGGCTTCCTCAGGATG
FD562779       --> GTGCTTTGGAGGCGATTAGAGAGAAAGGTCTCGGAGGCTTCCTCAGGATG
EY898784       --> GTGCGTTGGAGGCGATTAGAGAGAAAGGTCTCGGAGGCTTCCTCAGGATG
EY906324       --> GTGCGTTGGAGGCGATTAGAGAGAAAGGTCTCGGAGGCTTCCTCAGGATG
FD987595       --> GTGCGATGGAGGCGATTAGAGAGAAAGGTCTCGGAGGCTTCCTCAGGATG
EV548874       --> GTGCGATGGAGGCGATTAGAGAGAAAGGTCTCGGAGGCTTCCTCAGGATG
EX746611       --> GTGCGTTGGAGGCGATTAGAGAGAAAGGTCTCGGAGGCTTCCTCAGGATG
EY915441       --> GTGCGATGGAGGCGATTAGAGAGAAAGGTCTCAGAGGCTTCCTCAGGATG
EX906269       --> GTGCGTTGGAGGCGATTAGAGAGAAAGGTCTCGGAGGCTTCCTCAGGATG

               151    -    201
UN18657        --> ATCCGAGAAGAAGGCTTCCTGAGATGCCTGCCAGATGGAAACCTCTTGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD546963       <-- ATCCGAGAAGAAGGCTTCCTGAGATGCCTGCCAGATGGAAACCTCTTGCA
EY894737       <-- ATCCGAGAAGAAGGCTTCCTGAGATGCCTGCCAGATGGAAACCTCTTGCA
EY902531       <-- ATCCGAGAATAAGGCTTCCTGAGATGCCTGCCAGATGGAAACCTCTTGCA
FD530017       <-- ATCCGAGAAGAAGGCTTCCTGAGATGCCTGCCAGATGGAAACCTCTTGCA
EV544469       <-- ATCCGAGAAGAAGGCTTCCTGAGATGCCTGCCAGATGGAAACCTCTTGCA
EY911288       <-- ATCCGAGAAGAAGGCTTCCTGAGACGCCTGCCAGATGGAAACCTCTTGCA
EX769446       <-- ATCCGAGAAGAAGGCTTCCTGAGATGCCTGCCAGATGGAAACCTCTTGCA
EX909843       <-- ATCCGAGAAGAAGGCTTCCTGAGATGCCTGCCAGATGGAAACCTCTTGCA
FD983619       <-- ATCCGAGAAGAAGGCTTCCTGAGATGCCTGCCAGATGGAAACCTCTTGCA
FD977272       <-- ..............................CCAGATGGAAACCTCTTGCA
EY934717       <-- ..............................................TGCA
FD959897       <-- ..................................................
EY938631       --> ATCCGAGAAGAAGGCTTCCTGAGATGCCTGCCAGATGGAAACCTCTTGCA
FD532409       --> ATCCGAGAAGAAGGCTTCCTGAGATGCCTGCCAGATGGAAACCTCTTGCA
FD551094       --> ATCCGAGAAGAAGGCTTCCTGAGATGCCTGCCAGATGGAAACCTCTTGCA
FD961924       --> ATCCGAGAAGAAGGCTTCCTGAGATGCCTGCCAGATGGAAACCTCTTGCA
FD962415       --> ATCCGAGAAGAAGGCTTCCTGAGATGCCTGCCAGATGGAAACCTCTTGCA
FD981530       --> ATCCGAGAAGAAGGCTTCCTGAGATGCCTGCCAGATGGAAACCTCTTGCA
FD978336       --> ATCCGAGAAGAAGGCTTCCTGAGATGCCTGCCAGATGGAAACCTCTTGCA
EW716142       --> ATCCGAGAAGAAGGCTTCCTGAGATGCCTGCCAGATGGAAACCTCTTGTA
EW724181       --> ATCCGAGAAGAAGGCTTCCTGAGATGCCTGCCAGATGGAAACCTCTTGCA
FD562779       --> ATCCGAGAATAAGGCTTCCTGAGATGCCTGCCAGATGGAAACCTCTTGCA
EY898784       --> ATCCGAGAAGAAGGCTTCCTGAGATGCCTGCCAGATGGAAACCTCTTGCA
EY906324       --> ATCCGAGAATAAGGCTTCCTGAGATGCCTGCCAGATGGAAACCTCTTGCA
FD987595       --> ATCCGAGAAGAAGGCTTCCTGAGATGCCTGCCAGATGGAAACCTCTTGCA
EV548874       --> ATCCGAGAAGAAGGCTTCCTGAGATGCCTGCCAGATGGAAACCTCTTGCA
EX746611       --> ATCCGAGAAGAAGGCTTCCTGAGATGCCTGCCAGATGGAAACCTCTTGCA
EY915441       --> ATCCGAGAAGAAGGCTTCCTGAGACGCCTGCCAGATGGAAACCTCTTGCA
EX906269       --> ATCCGAGAAGAAGGCTTCCTGAGATGCCTGCCAGATGGAAACCTCTTGCA

               201    -    251
UN18657        --> AACCAAAATACACAACATAGGAGCAACGCTTATCGGTGTCGACAAGTTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD546963       <-- AACCAAAATACACAACATAGGAGCAACGCTTATCGGTGTCGACAAGTTCG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY894737       <-- AACCAAAATACACAACATAGGAGCAACGCTTATCGGTGTCGACAAGTTCG  Raphanus raphanistrum subsp. maritimus
EY902531       <-- AACCAAAATACACAACATAGGAGCAACGCTTATTGGTGTGGACAAGTTCG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD530017       <-- AACCAAAATACACAACATAGGAGCAACGCTTATCGGTGTCGACAAGTTCG  Raphanus raphanistrum subsp. maritimus
EV544469       <-- AACCAAAATACACAACATAGGAGCAACGCTTATTGGTGTCGACAAGTTCG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY911288       <-- AACCAAAATACACAACATAGGAGCAACGCTTATTGGTGTCGACAAGTTCG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX769446       <-- AACCAAAATACACAACATAGGAGCAACGCTTATCGGTGTCGACAAGTTCG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX909843       <-- AACCAAAATACACAACATAGGAGCAACGCTTATCGGTGTCGACAAGTTCG  Raphanus sativus cv Rat-Tail Radish #3870
FD983619       <-- AACCAAAATACACAACATAGGAGCAACGCTTATTGGTGTCGACAAGTTCG  Raphanus raphanistrum subsp. landra
FD977272       <-- AACCAAAATACACAACATAGGAGCAACGCTTATCGGTGTCGACAAGTTCG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY934717       <-- AACCAAAATACACAACATAGGAGCAACGCTTATCGGTGTGGACAAGTTCG  Raphanus sativus cv Early Scarlet Globe
FD959897       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY938631       --> AACCAAAATACACAACATAGGAGCAACGCTTATCGGTGTGGACAAGTTCG  Raphanus sativus cv Early Scarlet Globe
FD532409       --> AACCAAAATACACAACATAGGAGCAACGCTTATCGGTGTCGACAAGTTCG  Raphanus raphanistrum subsp. maritimus
FD551094       --> AACCAAAATACACAACATAGGAGCAACGCTTATCGGTGTCGACAAGTTCG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD961924       --> AACCAAAATACACAACATAGGAGCAACGCTTATCGGTGTCGACAAGTTCG  Raphanus raphanistrum subsp. maritimus
FD962415       --> AACCAAAATACACAACATAGGAGCAACGCTTATCG-TGTCGACAAGTc..  Raphanus raphanistrum subsp. maritimus
FD981530       --> AACCAAAATACACAACATAGGAGCAACGCTTATCGGTGTCGACAAGTTCG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD978336       --> AACCAAAATACACAACATAGGAGCAACGCTTATCGGTGTCGACAAGTTCG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW716142       --> AACCAAAATACACAACATAGGAGCAACGCTTATCGGTGTCGACAAGTTCG  Raphanus sativus var. oleiformis
EW724181       --> AACCAAAATACACAACATAGGAGCAACGCTTATCGGTGTCGACAAGTTCG  Raphanus sativus cv Early Scarlet Globe
FD562779       --> AACCAAAATACACAACATAGGAGCAACGCTTATCGGTGTCGACAAGTTCG  Raphanus sativus var. oleiformis
EY898784       --> AACCAAAATACACAACATAGGAGCAACGCTTATCGGTGTCGACAAGTTCG  Raphanus raphanistrum subsp. maritimus
EY906324       --> AACCAAAATACACAACATAGGAGCAACGCTTATTGGTGTGGACAAGTTCG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD987595       --> AACCAAAATACACAACATAGGAGCAACGCTTATTGGTGTCGACAAGTTCG  Raphanus raphanistrum subsp. landra
EV548874       --> AACCAAAATACACAACATAGGAGCAACGCTTATTGGTGTCGACAAGTTCG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX746611       --> AACCAAAATACACAACATAGGAGCAACGCTTATCGGTGCCGACAAGTTCG  Raphanus raphanistrum subsp. maritimus
EY915441       --> AACCAAAATACACAACATAGGAGCAACGCTTATTGGTGTCGACAAGTTCG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX906269       --> AACCAAAATACACAACATAGGAGCAACGCTTATCGGTGTCGACAAGTTCG  Raphanus sativus cv Rat-Tail Radish #3870

               251    -    301
UN18657        --> GTAACAAATACTACCAGAAGCTGGGCGATACTCAGTGCGGTAGACACAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD546963       <-- GTAACAAATACTACCAGAAGCTGGGCGATACTCAGTGCGGTAGACACAGG
EY894737       <-- GTAACAAATACTACCAGAAGCTGGGCGATACTCAGTGCGGTAGACACAGG
EY902531       <-- GTAACAAATACTACCAGAAGCTGGGCGATACTCAGTGCGGTAGACACAGG
FD530017       <-- GTAACAAATACTACCAGAAGCTGGGCGATACTCAGTGCGGTAGACACAGG
EV544469       <-- GTAACAAATACTACCAGAAGCTGGGCGATACTCAGTGCGGTAGACACAGG
EY911288       <-- GTAACAAATACTACCAGAAGCTGGGCGATACTCAGTGCGGTAGACACAGG
EX769446       <-- GTAACAAATACTACCAGAAGCTGGGCGATACTCAGTGCGGTAGACACAGG
EX909843       <-- GTAACAAATACTACCAGAAGCTGGGCGATACTCAGTGCGGTAGACACAGG
FD983619       <-- GTAACAAATACTACCAGAAGCTGGGCGATACTCAGTGCGGTAGACACAGG
FD977272       <-- GTAACAAATACTACCAGAAGCTGGGCGATACTCAGTGCGGTAGACACAGG
EY934717       <-- GTAACAAATACTACCAGAAGCTGGGCGATACTCAGTGCGGTAGACACAGG
FD959897       <-- ..................................................
EY938631       --> GTAACAAATACTACCAGAAGCTGGGCGATACTCAGTGCGGTAGACACAGG
FD532409       --> GTAACAAATACTACCAGAATCTGGGCGATACTCAGTGCGGTAGACACAGG
FD551094       --> GTAACAAATACTACCAGAAGCTGGGCGATACTCAGTGCGGTAGACACAGG
FD961924       --> GTAACAAATACTACCAGAAGCTGGGCGATACTCAGTGCGGTAGACACAGG
FD962415       --> ..................................................
FD981530       --> GTAACAAATACTACCAGAAGCTGGGCGATACTCAGTGCGGTAGACACAGG
FD978336       --> GTAACAAATACTACCAGAAGCTGGGCGATACTCAGTGCGGTAGACACAGG
EW716142       --> GTAACAAATACTACCAGAAGCTGGGCGATACTCAGTGCGGTAGACACAGG
EW724181       --> GTAACAAATACTACCAGAAGCTGGGCGATACTCAGTGCGGTAGACACAGG
FD562779       --> GTAACAAATACTACCAGAAGCTGGGCGATACTCAGTGCGGTAGACACTGG
EY898784       --> GTAACAAATACTACCAGAAGCTGGGCGATACTCAGTGCGG-AGACACAGG
EY906324       --> GTAACAAATACTACCAGAAGCTGGGCGATACTCAGTGCGGTAGACACAGG
FD987595       --> GTAACAAATACTACCAGAAGCTGGGCGATACTCAGTGCGGTAGACACAGG
EV548874       --> GTAACAAATACTACCAGAAGCTGGGCGATACTCAGTGCGGTAGACACAGG
EX746611       --> GTAACAAATACTACCAGAAGCTGGGCGATACTCAGTGCGGTAGACACAGG
EY915441       --> GTAACAAATACTACCAGAAGCTGGGCGATACTCAGTGCGGTAGACACAGG
EX906269       --> GTAACAAATACTACCAGAAGCTGGGCGATACTCAGTGCGGTAGACACAGG

               301    -    351
UN18657        --> TGGGTAGAGTACGCATCCAAGGATCGTTACAACGCATCTCAAGTACCAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD546963       <-- TGGGTAGAGTACGCATCCAAGGATCGTTACAACGCATCTCAAGTACCAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY894737       <-- TGGGTAGAGTACGCATCCAAGGATCGTTACAACGCATCTCAAGTACCAGC  Raphanus raphanistrum subsp. maritimus
EY902531       <-- TGGGTAGAGTACGCATCCAAGGATCGTTACAACGCATCTCAAGTACCAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD530017       <-- TGGGTAGAGTACGCATCCAAGGATCGTTACAACGCATCTCAAGTACCAGC  Raphanus raphanistrum subsp. maritimus
EV544469       <-- TGGGTAGAGTACGCATCCAAGGATCGTTACAACGCATCTCAAGTACCAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY911288       <-- TGGGTAGAGTACGCATCCAAGGATCGTTACAACGCATCTCAAGTACCAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX769446       <-- TGGGTAGAGTACGCATCGAAGGATCGTTACAACGCATCTCAAGTACCAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX909843       <-- TGGGTAGAGTACGCATCGAAGGATCGTTACAACGCATCTCAAGTACCAGC  Raphanus sativus cv Rat-Tail Radish #3870
FD983619       <-- TGGGTAGAGTACGCATCCAAGGATCGTTACAACGCATCTCAAGTACCAGC  Raphanus raphanistrum subsp. landra
FD977272       <-- TGGGTAGAGTACGCATCCAAGGATCGTTACAACGCATCTCAAGTACCAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY934717       <-- TGGGTAGAGTACGCATCCAAGGATCGTTACAACGCATCTCAAGTACCAAC  Raphanus sativus cv Early Scarlet Globe
FD959897       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY938631       --> TGGGTAGAGTACGCATCCAAGGATCGTTACAACGCATCTCAAGTACCAAC  Raphanus sativus cv Early Scarlet Globe
FD532409       --> TGGGTAGAGTACGCATCCAAGGATCGTTACAACGCATCTCAAGTACCAGC  Raphanus raphanistrum subsp. maritimus
FD551094       --> TGGGTAGAGTACGCATCCAAGGATCGTTACAACGCATCTCAAGTACCAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD961924       --> TGGGTAGAGTACGCATCCAAGGATCGTTACAACGCATCTCAGGTACCAGC  Raphanus raphanistrum subsp. maritimus
FD962415       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD981530       --> TGGGTAGAGTACGCATCCAAGGATCGTTACAACGCATCTCAAGTACCAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD978336       --> TGGGTAGAGTACGCATCCAAGGATCGTTACAACGCATCTCAAGTACCAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW716142       --> TGGGTAGAGTACGCATCGAAGGATCGTTACAACGCATCTCAAGTACCAGC  Raphanus sativus var. oleiformis
EW724181       --> TGGGTAGAGTACGCATCGAAGGATCGTTACAACGCATCTCAAGTACCAGC  Raphanus sativus cv Early Scarlet Globe
FD562779       --> TGGGTAGAGTACGCATCGAAGGATCGTTACAACGCATCTCAAGTACCAGC  Raphanus sativus var. oleiformis
EY898784       --> TGGGaga...........................................  Raphanus raphanistrum subsp. maritimus
EY906324       --> TGGGTAGAGTACGCATCCAAGGATCGTTACAACGCATCTCAAGTACCAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD987595       --> TGGGTAGAGTACGCATCCAAGGATCGTTACAACGCATCTCAAGTACCAGC  Raphanus raphanistrum subsp. landra
EV548874       --> TGGGTAGAGTACGCATCCAAGGATCGTTACAACGCATCTCAAGTACCAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX746611       --> TGGGTAGAGTACGCATCCAAGGATCGTTACAACGCATCTCAAGTACCAGC  Raphanus raphanistrum subsp. maritimus
EY915441       --> TGGGTAGAGTACGCATCCAAGGATCGTTACAACGCATCTCAAGTACCAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX906269       --> TGGGTAGAGTACGCATCGAAGGATCGTTACAACGCATCTCAAGTACCAGC  Raphanus sativus cv Rat-Tail Radish #3870

               351    -    401
UN18657        --> CGAATGGCACGGATGGCTTCATTTCATCACTGATCACACCGGAGACGAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD546963       <-- CGAATGGCACGGATGGCTTCATTTCATCACTGATCACACCGGAGACGAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY894737       <-- CGAATGGCACGGATGGCTTCATTTCATCACTGATCACACCGGAGACGAGC  Raphanus raphanistrum subsp. maritimus
EY902531       <-- CGAATGGCACGGATGGCTTCATTTCATCACTGATCACACTGGAGATGAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD530017       <-- CGAATGGCACGGATGGCTTCATTTCATCACTGATCACACCGGAGACGAGC  Raphanus raphanistrum subsp. maritimus
EV544469       <-- CGAATGGCACGGATGGCTTCATTTCATCACTGATCACACTGGAGATGAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY911288       <-- CGAATGGCACGGATGGCTTCATTTCATCACTGATCACACTGGAGATGAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX769446       <-- CGAATGGCACGGATGGCTTCATTTCATCACTGATCACACCGGAGACGACC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX909843       <-- CGAATGGCACGGATGGCTTCATTTCATCACTGATCACACCGGAGACGACC  Raphanus sativus cv Rat-Tail Radish #3870
FD983619       <-- CGAATGGCACGGATGGCTTCATTTCATCACTGATCACACTGGAGATGAGC  Raphanus raphanistrum subsp. landra
FD977272       <-- CGAATGGCACGGATGGCTTCATTTCATCACTGATCACACCGGAGACGAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY934717       <-- CGAATGGCACGGATGGCTTCATTTCATCACTGATCACACTGGAGATGAGC  Raphanus sativus cv Early Scarlet Globe
FD959897       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY938631       --> CGAATGGCACGGATGGCTTCATTTCATCACTGATCACACTGGAGATGAGC  Raphanus sativus cv Early Scarlet Globe
FD532409       --> CGAATGGCACGGATGGCTTCATTTCATCACTGATCACACCGGAGACGAGC  Raphanus raphanistrum subsp. maritimus
FD551094       --> CGAATGGCACGGATGGCTTCATTTCATCACTGATCACACCGGAGACGAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD961924       --> CGAATGGCACGGATGGCTTCATTTCATCACTGATCACACCGGAGACGAGC  Raphanus raphanistrum subsp. maritimus
FD962415       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD981530       --> CGAATGGCACGGATGGCTTCATTTCATCACTGATCACACCGGAGACGAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD978336       --> CGAATGGCACGGATGGCTTCATTTCATCACTGATCACACCGGAGACGAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW716142       --> CGAATGGCACGGATGGCTTCATTTCATCACTGATCACACCGGAGACGACC  Raphanus sativus var. oleiformis
EW724181       --> CGAATGGCACGGATGGCTTCATTTCATCACTGATCACACCGGAGACGACC  Raphanus sativus cv Early Scarlet Globe
FD562779       --> CGAATGGCACGGATGGCTTCATTTCATCACTGATCACACCGGAGACGACC  Raphanus sativus var. oleiformis
EY898784       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY906324       --> CGAATGGCACGGATGGCTTCATTTCATCACTGATCACACTGGAGATGAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD987595       --> CGAATGGCACGGATGGCTTCATTTCATCACTGATCACACTGGAGATGAGC  Raphanus raphanistrum subsp. landra
EV548874       --> CGAATGGCACGGATGGCTTCATTTCATCACTGATCACACTGGAGATGAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX746611       --> CGAATGGCACGGATGGCTTCATTTCATCACTGATCACACCGGAGACGAGC  Raphanus raphanistrum subsp. maritimus
EY915441       --> CGAATGGCACGGATGGCTTCATTTCATCACTGATCACACTGGAGATGAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX906269       --> CGAATGGCACGGATGGCTTCATTTCATCACTGATCACACCGGAGACGACC  Raphanus sativus cv Rat-Tail Radish #3870

               401    -    451
UN18657        --> TGTTGAGTCAGAAACCAAAAAGGTATGGGATTGAGCATAAGGAGAATTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD546963       <-- TGTTGAGTCAGAAACCAGAAAGGTATGGGATTGAGCATAAGGAGAATTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY894737       <-- TGTTGAGTCAGAAACCAGAAAGGTATGGGATTGAGCATAAGGAGAATTTC  Raphanus raphanistrum subsp. maritimus
EY902531       <-- TGTTGAGTCAGAAACCAAAAAGGTATGGGATTGAGCATAAAGAGAACTTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD530017       <-- TGTTGAGTCAGAAACCAGAAAGGTATGGGATTGAGCATAAGGAGAATTTC  Raphanus raphanistrum subsp. maritimus
EV544469       <-- TGTTGAGTCAGAAACCAAAAAGGTATGGGATTGAGCATAAGGAGAACTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY911288       <-- TGTTGAGTCAGAAACCAAAAAGGTATGGGATTGAGCATAAGGAGAACTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX769446       <-- TGTTGAGTCAGAAACCAAAAAGGTATGGGATTGAGCATAAGGAGAATTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX909843       <-- TGTTGAGTCAGAAACCAAAAAGGTATGGGATTGAGCATAAGGAGAATTTC  Raphanus sativus cv Rat-Tail Radish #3870
FD983619       <-- TGTTGAGTCAGAAACCAAAAAGGTATGGGATTGAGCATAAGGAGAACTTC  Raphanus raphanistrum subsp. landra
FD977272       <-- TGTTGAGTCAGAAACCAGAAAGGTATGGGATTGAGCATAAGGAGAATTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY934717       <-- TGTTGAGTCAGAAACCAAAAAGGTATGGGATTGAGCATAAGGAGAATTTC  Raphanus sativus cv Early Scarlet Globe
FD959897       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY938631       --> TGTTGAGTCAGAAACCAAAAAGGTATGGGATTGAGCATAAGGAGAATTTC  Raphanus sativus cv Early Scarlet Globe
FD532409       --> TGTTGAGTCAGAAACCAGAAAGGTATGGGATTGAACATAAGGAGAATTTC  Raphanus raphanistrum subsp. maritimus
FD551094       --> TGTTGAGTCAGAAACCAGAAAGGTATGGGATTGAGCATAAGGAGAATTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD961924       --> TGTTGAGTCAGAAACCAGAAAGGTATGGGATTGAGCATAAGGAGAATTTC  Raphanus raphanistrum subsp. maritimus
FD962415       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD981530       --> TGTTGAGTCAGAAACCAGAAAGGTATGGGATTGAGCATAAGGAGAATTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD978336       --> TGTTGAGTCAGAAACCAGAAAGGTATGGGATTGAGCATAAGGAGAACTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW716142       --> TGTTGAGTCAGAAACCAAAAAGGTATGGGATTGAGCATAAGGAGAATTTC  Raphanus sativus var. oleiformis
EW724181       --> TGTTGAGTCAGAAACCAAAAAGGTATGGGATTGAGCATAAGGAGAATTTC  Raphanus sativus cv Early Scarlet Globe
FD562779       --> TGTTGAGTCAGAAACCAAAAAGGTATGGGATTGAGCATAAGGAGAATTTC  Raphanus sativus var. oleiformis
EY898784       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY906324       --> TGTTGAGTCAGAAACCAAAAAGGTATGGGATTGAGCATAAAGAGAACTTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD987595       --> TGTTGAGTCAGAAACCAAAAAGGTATGGGATTGAGCATAAGGAGAACTTC  Raphanus raphanistrum subsp. landra
EV548874       --> TGTTGAGTCAGAAACCAAAAAGGTATGGGATTGAGCATAAGGAGAACTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX746611       --> TGTTGAGTCAGAAACCAGAAAGGTATGGGATTGAGCATAAGGAGAATTTC  Raphanus raphanistrum subsp. maritimus
EY915441       --> TGTTGAGTCAGAAACCAAAAAGGTATGGGATTGAGCATAAGGAGAACTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX906269       --> TGTTGAGTCAGAAACCAAAAAGGTATGGGATTGAGCATAAGGAGAATTTC  Raphanus sativus cv Rat-Tail Radish #3870

               451    -    501
UN18657        --> TCTGGAGAAGGTGATGCATACATTTACCATTCTAAAGGGCATACCTTGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD546963       <-- TCTGGAGAAGGTGATGCATACATTTACCATTCTAAAGGGCATACCTTGAA
EY894737       <-- TCTGGAGAAGGTGATGCATACATTTACCATTCTAAAGGGCATACCTTGAA
EY902531       <-- TCTGGAGAAGGTGATGCATACATTTACCATTTTAAAGGACATACCTTGAA
FD530017       <-- TCTGGAGAAGGTGATGCATACATTTACCATTCTAAAGGGCATACCTTGAA
EV544469       <-- TCTGGAGAAGGTGATGCATACATTTACCATTCTAAAGGGCATACCTTGAA
EY911288       <-- TCTGGAGAAGGTGATGCATACATTTACCATTCTAAAGGGCATACCTTGAA
EX769446       <-- TCTGGAGAAGGTGATGCATACATTTACCATTCTAAAGGGCATACCTTGAA
EX909843       <-- TCTGGAGAAGGTGATGCATACATTTACCATTCTAAAGGGCATACCTTGAA
FD983619       <-- TCTGGAGAAGGTGATGCATACATTTACCATTCTAAAGGGCATACCTTGAA
FD977272       <-- TCTGGAGAAGGTGATGCATACATTTACCATTCTAAAGGGCATACCTTGAA
EY934717       <-- TCTGGAGAAGGTGATGCATACATTTACCGTTCTAAAGGGCATACCTTTAA
FD959897       <-- ..................................................
EY938631       --> TCTGGAGAAGGTGATGCATACATTTACCGTTCTAAAGGGCATACCTTTAA
FD532409       --> TCTGGAGAAGGTGATGCATACATTTACCATTCTAAAGGGCATACCTTGAA
FD551094       --> TCTGGAGAAGGTGATGCATACATTTACCATTCTAAAGGGCATACCTTGAA
FD961924       --> TCTGGAGAAGGTGATGCATACATTTACCATTCTAAAGGGCATACCTTGAA
FD962415       --> ..................................................
FD981530       --> TCTGGAGAAGGTGATGCATACATTTACCATTCTAAAGGGCATACCTTGAA
FD978336       --> TCTGGAGAAGGTGATGCATACATTTACCATTCTAAAGGGCATACCCTGAA
EW716142       --> TCTGGAGAAGGTGATGCATACATTTACCATTCTAAAGGGCATACCTTGAA
EW724181       --> TCTGGAGAAGGTGATGCATACATTTACCATTCTAAAGGGCATACCTTGAA
FD562779       --> TCTGGAGAAGGTGATGCATACATTTACCATTCTAAAGGGCATACCTTGAA
EY898784       --> ..................................................
EY906324       --> TCTGGAGAAGGTGATGCATACATTTACCATTCTAAAGGACATACCTTGAA
FD987595       --> TCTGGAGAAGGTGATGCATACATTTACCATTCTAAAGGGCATACCTTGAA
EV548874       --> TCTGGAGAAGGTGATGCATACATTTACCATTCTAAAGGGCATACCTTGAA
EX746611       --> TCTGGAGAAGGTGATGCATACATTTACCATTCTAAAGGGCATACCTTGAA
EY915441       --> TCTGGAGAAGGTGATGCATACATTTACCATTCTAAAGGGCATACCTTGAA
EX906269       --> TCTGGAGAAGGTGATGCATACATTTACCATTCTAAAGGGCATACCTTGAA

               501    -    551
UN18657        --> CCCGGGGCAAAAGAACTGGACTCGGTACCAACCATGGGTACCCACCAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD546963       <-- CCCGGGGCAAAAGAACTGGACTCGGTACCAACCATGGGTACCCACCAAGA
EY894737       <-- CCCGGGGCAAAAGAACTGGACTCGGTACCAACCATGGGTACCCACCAAGA
EY902531       <-- CCCGGGGCAAAAGAACTGGACTCGGTACCAACCATGGGTACCCACCAAGA
FD530017       <-- CCCGGGGCAAAAGAACTGGACTCGGTACCAACCATGGGTACCCACCAAGA
EV544469       <-- CCCGGGGCAAAAGAACTGGACTCGGTACCAACCATGGGTACCCACCAAGA
EY911288       <-- CCCGGGGCAAAAGAACTGGACTCGGTACCAACCATGGGTACCCACCAAGA
EX769446       <-- CCCGGGGCAAAAGAACTGGACTCGGTACCAACCATGGGTACCCACCAAGA
EX909843       <-- CCCGGGGCAAAAGAACTGGACTCGGTACCAACCATGGGTACCCACCAAGA
FD983619       <-- CCCGGGGCAAAAGAACTGGACTCGGTACCAACCATGGGTACCCACCAAGA
FD977272       <-- CCCGGGGCAAAAGAACTGGACTCGGTACCAACCATGGGTACCCACCAAGA
EY934717       <-- CCCGGGGCAAAAGAACTGGACTCGGTACCAACCATGGGTACCCACCAAGA
FD959897       <-- ........................GTACCAACCATGGGTACCCACCAAGA
EY938631       --> CCCGGGGCAAAAGAACTGGACTCGGTACCAACCATGGGTACCCACCAAGA
FD532409       --> CCCGGGGCAAAAGAACTGGACTCGGTACCAACCATGGGTACCCACCAAGA
FD551094       --> CCCGGGGCAAAAGAACTGGACTCGGTACCAACCATGGGTACCCACCAAGA
FD961924       --> CCCGGGGCAAAGGAACTGGACTCGGTACCAACCATGGGTACCCACCAATA
FD962415       --> ..................................................
FD981530       --> CCCGGGGCAAAAGAACTGGACTCGGTACCAACCATGGGTACCCACCAAGA
FD978336       --> CCCGGGGCAAAAGAACTGGACTCGGTACCAACCATGGGTACCCACCAAGA
EW716142       --> CCCGGGGCAAAAGAACTGGACTCGGTACCAACCATGGGTACCCACCAAGA
EW724181       --> CCCGGGGCAAAAGAACTGGACTCGGTACCAACCATGGGTACCCACCAAGA
FD562779       --> CCCGGGGCAAAAGAACTGGACTCGGTACCAACCATGGGTACCCACCAAGA
EY898784       --> ..................................................
EY906324       --> CCCGGGGCAAAAGAACTGGACTCGGTACCAACCATGGGTACCCACCAAGA
FD987595       --> CCCGGGGCAAAAGAACTGGACTCGGTACCAACCATGGGTACCCACCAAGA
EV548874       --> CCCGGGGCAAAAGAACTGGACTCGGTACCAACCATGGGTACCCACCAAGA
EX746611       --> CCCGGGGCAAAAGAACTGGACTCGGTACCAACCATGGGTACCCACCAAGA
EY915441       --> CCCGGGGCAAAAGAACTGGACTCGGTACCAACCATGGGTACCCACCAAGA
EX906269       --> CCCGGGGCAAAAGAACTGGACTCGGTACCAACCATGGGTACCCACCAAGA

               551    -    601
UN18657        --> CCAAGTAAGAATGTGAGAGCTTTTTGGTTAATGCTCTCTGAGTGAGTGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD546963       <-- CCAAGTAAGAATGTGAGAGCTTTTTGGTTAATGCTCTCTGAGTGAGTGAT
EY894737       <-- CCAAGTAAGAATGTGAGAGCTTTTTGGTTAATGCTCTCTGAGTGAGTGAT
EY902531       <-- CCAAGTAAGAATGTGAGAGCTTTT-GGTTAATGCTCTTTGAGTGAGTGAT
FD530017       <-- CCAAGTAAGAATGTGAGAGCTTTTTGGTTAATGCTCTCTGAGTGAGTGAT
EV544469       <-- CCAAGTAAGAATGTGAGAGCTTTTTGGTTAATGCTCTCTGAGTGAGTGAT
EY911288       <-- CCAAGTAAGAATGTGAGAGCTTTTTGGTTAATGCTCTCTGAGTGAGTGAT
EX769446       <-- CCAAGTAAGAATGTGAGAGCTTTTTGGTTAATGCTCTCTGAGTGAGTGAT
EX909843       <-- CCAAGTAAGAATGTGAGAGCTTTTTGGTTAATGCTCTCTGAGTGAGTGAT
FD983619       <-- CCAAGTAAGAATGTGAGAGCTTTTTGGTTAATGCTCTCTGAGTGAGTGAT
FD977272       <-- CCAAGTAAGAATGTGAGAGCTTTTTGGTTAATGCTCTCTGAGTGAGTGAT
EY934717       <-- CCAAGTAAGAATGTGAGAGCTTTTTGGTTAATGCTCCCTGAGTGAGTGAT
FD959897       <-- CCAAGTAAGAATGTGAGAGCTTTTTGGTTAATGCTCTCTGAGTGAGTGAT
EY938631       --> CCAAGTAAGAATGTGAGAGCTTTTTGGTTAATGCTCCCTGAGTGAGTGAT
FD532409       --> CCAAGTAAGAATGTGAGAGCTTTTTGGTTAATGCTCTCTGAGTGAGTGAT
FD551094       --> CCAAGTAAGAATGTGAGAGCTTTTTGGTTAATGCTCTCTGAGTGAGTGAT
FD961924       --> CCAAGTAAGAATGTGAGAGCTTTTTGGTTAATGCTCTCTGAGTGAGTGAT
FD962415       --> ..................................................
FD981530       --> CCAAGTAAGAATGTGAGAGCTTTTTGGTTAATGCTCTCTGAGTGAGTGAT
FD978336       --> CCAAGTAAGAATGTGAGAGCTTTTTGGTTAATGCTCTCTGAGTGAGTGAT
EW716142       --> CCAAGTAAGAATGTTAGAGCTTTTTGGTTAATGCTCTCTGAGTGAGTGAT
EW724181       --> CCAAGTAAGAATGTGAGAGCTTTTTGGTTAATGCTCTCTGAGTGAGTGAT
FD562779       --> CCAAGTAAGAATGTGAGAGCTTTTTGGTTAATGCTCTCTGAGTGAGTGAT
EY898784       --> ..................................................
EY906324       --> CCAAGTAAGAATGTGAGAGCTTTT-GGTTAATGCTCTCTGAGTGAGTGAT
FD987595       --> CCAAGTAAGAATGTGAGAGCTTTTTGGTTAATGCTCTCTGAGTGAGTGAT
EV548874       --> CCAAGTAAGAATGTGAGAGCTTTTTGGTTAATGCTCTCTGAGTGAGTGAT
EX746611       --> CCAAGCAAGAATGTGAGAGCTTTTTGGTTAATGCTCTCTGAGTGAGTGAT
EY915441       --> CCAAGTAAGAATGTGAGAGCTTTTTGGTTAATGCTCTCTGAGTGAGTGAT
EX906269       --> CCAAGTAAGAATGTGAGAGCTTTTTGGTTAATGCTCTCTGAGTGAGTGAT

               601    -    651
UN18657        --> TTATTGTTTT-GTTTCAGTCTCTTTTGAATAAAAGCAAAGCTGTTTT-GG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD546963       <-- TTATTGTTTT-GTTTCAGTCTCTTTTCAATAAAAGCAAAGCTGTTTT-GG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY894737       <-- TTATTGTTTT-GTTTCAGTCTCTTTTCAATAAAAGCAAAGCTGTTTT-GG  Raphanus raphanistrum subsp. maritimus
EY902531       <-- TTATTGTTTT-GTTTCAGTCTCTTTTGAATAAAAGCAAAGCTGTTTT-GG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD530017       <-- TTATTGTTTT-GTTTCAGTCTCTTTTCAATAAAAGCAAAGCTGTTTT-GG  Raphanus raphanistrum subsp. maritimus
EV544469       <-- TTATTGTTTT-GTTTCAGTCTCTTTTGAATAAAAGCAAAGCTGTTTT-GG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY911288       <-- TTATTGTTTT-GTTTCAGTCTCTTTTGAATAAAAGCAAAGCTGTTTT-GG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX769446       <-- TTATTGTTTT-GTTTCAGTCTCTTTTGAATAAAAGCAAAGCTGTTTT-GG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX909843       <-- TTATTGTTTT-GTTTCAGTCTCTTTTGAATAAAAGCAAAGCTGTTTT-GG  Raphanus sativus cv Rat-Tail Radish #3870
FD983619       <-- TTATTGTTTT-GTTTCAGTCTCTTTTGAATAAAAGCAAAGCTGTTTT-GG  Raphanus raphanistrum subsp. landra
FD977272       <-- TTATTGTTTT-GTTTCAGTCTCTTTTCAATAAAAGCAAAGCTGTTTT-GG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY934717       <-- TTATTGTTTT-GTTTCAGTCTCTTTTGAATAAAAGCAAAGCTGTTTT-GG  Raphanus sativus cv Early Scarlet Globe
FD959897       <-- TTATTGTTTT-GTTTCAGTCTCTTTTCAATAAAAGCAAAGCTGTTTT-GG  Raphanus raphanistrum subsp. maritimus
EY938631       --> TTATTGTTTT-GTTTCAGTCTCTTTTGAATAAAAGCAAAGCTGTTTT-GG  Raphanus sativus cv Early Scarlet Globe
FD532409       --> TTATTGTTTT-GTTTCAGTCTCTTTTCAATAAAAGCAAAGCTGTTTT-GG  Raphanus raphanistrum subsp. maritimus
FD551094       --> TTATTGTTTT-GTTTCAGTCTCTTTTCAATAAAAGCAAAGCTGTTTT-GG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD961924       --> TTATTGTTTT-GTTTCAGTCTCTTTTCAATAAAAGCAAAGCTGTTTT-GG  Raphanus raphanistrum subsp. maritimus
FD962415       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD981530       --> TTATTGTTTT-GTTTCAGTCTCTTTTCAATAAAAGCAAAGCTGTTTT-GG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD978336       --> TTATTGTTTT-GTTTCAGTCTCTTTTGAATAAAAGCAAAGCTGTTTT-GG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW716142       --> TTATTGTTTT-GTTTCAGTCTCTTTTGAATAAAAGCAAAGCTGTTTT-GG  Raphanus sativus var. oleiformis
EW724181       --> TTATTGTTTTTGTTTCAGTCTCTTTTGAATAAA-GCAAAGCTGTTTTTGG  Raphanus sativus cv Early Scarlet Globe
FD562779       --> TTATTGTTTT-GTTTCAGTCTCTTTTGAATAAAAGCAAAGCTGTTTT-GG  Raphanus sativus var. oleiformis
EY898784       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY906324       --> TTATTGTTTT-GTTTCAGTCTCTTTTGAATAAAAGCAAAGCTGTTTT-GG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD987595       --> TTATTGTTTT-GTTTCAGTCTCTTTTGAATAAAAGCAAAGCTGTTTT-GG  Raphanus raphanistrum subsp. landra
EV548874       --> TTATTGTTTT-GTTTCAGTCTCTTTTGAATAAAAGCAAAGCTGTTTT-GG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX746611       --> TTATTGTTTT-GTTTCAGTCTCTTTTCAATAAAAGCAAAGCTGTTTT-GG  Raphanus raphanistrum subsp. maritimus
EY915441       --> TTATTGTTTT-GTTTCAGTCTCTTTTGAATAAAAGCAAAGCTGTTTT-GG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX906269       --> TTATTGTTTT-GTTTCAGTCTCTTTTGAATAA..................  Raphanus sativus cv Rat-Tail Radish #3870

               651    -    701
UN18657        --> ATCTCTAAAGCTGAACAATTGGGTTTATTGAATTGTGTAATTGATGCTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD546963       <-- ATCTCTAAAGCTGAACAATTGGGTTTATTGAATTGTGTAATTGATGCTGT
EY894737       <-- ATCTCTAAAGCTGAACAATTGGGTTTATTGAATTGTGTAATTGATGCTGc
EY902531       <-- ATCTCTAAAGCTGAACAATTGGATTTATGGAATTGTGTAATTGATGATGT
FD530017       <-- ATCTCTAAAGCTGAACAATTGGGTTTATTGAATTGTGTAATTGATGCTGc
EV544469       <-- ATCTCTAAAGCTGAACAATTGGGTTTATTGAATTGTGTAATTGATGCTGT
EY911288       <-- ATCTCTAAAGCTGAACAATTGGGTTTATTGAATTGTGTAATTGATGCTGT
EX769446       <-- ..................................................
EX909843       <-- ..................................................
FD983619       <-- ATCTCTAAAGCTGAACAATTGGGTTTATTGAATTGTGTAATTGATGCTGT
FD977272       <-- ATCTCTAAAGCTGAACAATTGGGTTTATTGAATTGTGTAATTGATGCTGT
EY934717       <-- ATCTCTAAAGCTGAACAATTGGGTTTATTGAATTGTGTAATTGATGCTGT
FD959897       <-- A.................................................
EY938631       --> ATCTCTAAAGCTGAACAATTG.............................
FD532409       --> ATCTCTAAAGCTGAACAATTGGGTTTATTGAATTGTGTAATTGATGCTGT
FD551094       --> ATCTCTAAAGCTGAACAATTGGGTTTATTGAATTGTGTAATTGATGCTGT
FD961924       --> ATCTCTAAAGCTGAACAATTGGGTTTATTGAATTGTGTAATTGATGCTGT
FD962415       --> ..................................................
FD981530       --> ATCTCTAAAGCTGAACAATTGGGTTTATTGAATTGTGTAATTGATGCTGT
FD978336       --> ATCTCTAAAGCTGAACAATTGGGTTTATTGAATTGTGTA-TTGATGCTG.
EW716142       --> ATCTCTAAAGCTGAACAATTGGGTTTATTGAATTGTGTAATTGATGCTGT
EW724181       --> ATCTCTAAAGCTGAACAATTGGGTTTATTGAATTGTGTAATTGATGCTGT
FD562779       --> ATCTCTAAAGCTGAACAATTGGGTTTATTGAATTGTGTAATTGATGCTGT
EY898784       --> ..................................................
EY906324       --> ATCTCTAAAGCTGAACAATTGGATTTATGGAATTGTGTAATTGATGATGT
FD987595       --> ATCTCTAAAGCTGAACAATTGGGTTTATTGAATTGTGTAATTGATGCTGT
EV548874       --> ATCTCTAAAGCTGAACAATTGGGTTTATTGAATTGTGTAATTGATGCTGT
EX746611       --> ATCTCTAAAGCTGAACAATTGGGTTTATTGAATTGTGTAATTGATGCTGT
EY915441       --> ATCT..............................................
EX906269       --> ..................................................

               701    -    751
UN18657        --> TTAATCATATTGCTTCTTTCTCCTCTGG-CGAGGAGATTATTACACATTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD546963       <-- TTAATCATATTGCTTCTTTCTCCTCTGG-CGAGGAGATTATTAC......
EY894737       <-- tt................................................
EY902531       <-- TTAATCATATTtgcttg.................................
FD530017       <-- tt................................................
EV544469       <-- TTAATCATATTGCTTCTTTCTCCTCTGG-CGAGGAGATTATTACAC....
EY911288       <-- TTAATCATATTGCTTCTTTCTCCTCTGG-CGAGGAGATTATTAC......
EX769446       <-- ..................................................
EX909843       <-- ..................................................
FD983619       <-- TTAATCATATTGCTTCTTTCTCCTCTGG-CGAGGAGATTAc.........
FD977272       <-- TTAATCATATTGCTTCTTTCTCCTCTGG-CGAGGAGATTATTACAC....
EY934717       <-- TTAATCATATTGCTTCTTTCTCCTCTGG-AGAGGAGATTATTACACATTT
FD959897       <-- ..................................................
EY938631       --> ..................................................
FD532409       --> TTA-TCATATTGCTTCTTTCTC-TCTGG-CGAGGAG..............
FD551094       --> TTAATCATATTGCTTCTTTCTCCTCTGG-CGAG.................
FD961924       --> ..................................................
FD962415       --> ..................................................
FD981530       --> TTAATCATATTGCTTCTTTCTCCTCTGG-CGAGGAGATTATTACACAaaa
FD978336       --> ..................................................
EW716142       --> TTAATCATATTGCTTCTTT...............................
EW724181       --> TTAATCATATTGCTTCTTTCTCCTCTGGGAGAGGAGATTAT.........
FD562779       --> TTAATCAT..........................................
EY898784       --> ..................................................
EY906324       --> TTAATCATATTtgcttgaaaaaaaa.........................
FD987595       --> TTAATCATATTGCTTCTTTCTCCTCTGG-CGAGGAGATTAcaaaa.....
EV548874       --> TTAATCATATTGCTTCTTTCTCCTCTGG-CGAGGAGATTATTACAC....
EX746611       --> TTAATCATATTGCTTCTTTCTCCTCTGG-CGAGGAGATT...........
EY915441       --> ..................................................
EX906269       --> ..................................................

               751    -    801
UN18657        --> ACACTACAGGATTATAAATATTAGTTTGAAAAGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD546963       <-- ...................................
EY894737       <-- ...................................
EY902531       <-- ...................................
FD530017       <-- ...................................
EV544469       <-- ...................................
EY911288       <-- ...................................
EX769446       <-- ...................................
EX909843       <-- ...................................
FD983619       <-- ...................................
FD977272       <-- ...................................
EY934717       <-- ACACTACAGGATTATAAATATTAGTTTGAAAAGCC
FD959897       <-- ...................................
EY938631       --> ...................................
FD532409       --> ...................................
FD551094       --> ...................................
FD961924       --> ...................................
FD962415       --> ...................................
FD981530       --> a..................................
FD978336       --> ...................................
EW716142       --> ...................................
EW724181       --> ...................................
FD562779       --> ...................................
EY898784       --> ...................................
EY906324       --> ...................................
FD987595       --> ...................................
EV548874       --> ...................................
EX746611       --> ...................................
EY915441       --> ...................................
EX906269       --> ...................................