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Alignment for radish unigene UN18786

               1      -     51
UN18786        --> GGATACATGCTCCTTGTCGATGGTGGTATGATGTCGTTTATGGTGAAGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542798       <-- ..................................................
FD537412       <-- ..................................................
FD529707       <-- ..................................................
EV529784       <-- ..................................................
FD533550       --> GGATACATGCTCCTTGTCGATGGTGGTATGATGTCGTTTATGGTGAAGTC
EV538881       --> ..................................................
EV524897       --> ..................................................

               51     -    101
UN18786        --> TAAGACTAAAGAGACTGTCACATGTGAAGTTGTTGATGGTGGAGAACTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542798       <-- ..................................................
FD537412       <-- ..................................................
FD529707       <-- ..................................................
EV529784       <-- ..................................................
FD533550       --> TAAGACTAAAGAGACTGTCACATGTGAAGTTGTTGATGGTGGAGAACTTA
EV538881       --> ..................................................
EV524897       --> ..................................................

               101    -    151
UN18786        --> AGTCAAGGAGACACTTGAATGTCCGAGGGAAAAGTGCTACATTGCCTTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542798       <-- ..................................................
FD537412       <-- ..................................................
FD529707       <-- ..................................................
EV529784       <-- ..................................................
FD533550       --> AGTCAAGGAGACACTTGAATGTCCGAGGGAAAAGTGCTACATTGCCTTCA
EV538881       --> ..................................................
EV524897       --> ..................................................

               151    -    201
UN18786        --> ATCACTGAGAAGGATTGGGAGGATATTAAGTTCGGAGTGGAGAACAAAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542798       <-- ..................................................
FD537412       <-- ..................................................
FD529707       <-- ..................................................
EV529784       <-- ..................................................
FD533550       --> ATCACTGAGAAGGATTGGGAGGATATTAAGTTCGGAGTGGAGAACAAAGT
EV538881       --> ..................................................
EV524897       --> ..................................................

               201    -    251
UN18786        --> TGACTTCTATGCAGTTTCTTTTGTCAAAGATGCACAAGTGGTACATGAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542798       <-- ..................................................
FD537412       <-- ..................................................
FD529707       <-- ..................................................
EV529784       <-- ..................................................
FD533550       --> TGACTTCTATGCAGTTTCTTTTGTCAAAGATGCACAAGTGGTACATGAAC
EV538881       --> ..................................................
EV524897       --> ..................................................

               251    -    301
UN18786        --> TCAAGAAATACCTTCAAGGCTGTGGTGCCGATATTCATGTGATTGTAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542798       <-- ..................................................
FD537412       <-- ..................................................
FD529707       <-- ..................................................
EV529784       <-- ..................................................
FD533550       --> TCAAGAAATACCTTCAAGGCTGTGGTGCCGATATTCATGTGATTGTAAAA
EV538881       --> ..................................................
EV524897       --> ..................................................

               301    -    351
UN18786        --> ATTGAAAGCGCAGACTCCATACCTAACTTGCATTCCATTATCACCGCATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542798       <-- ..................................................
FD537412       <-- ..................................................
FD529707       <-- ..................................................
EV529784       <-- ..................................................
FD533550       --> ATTGAAAGCGCAGACTCCATACCTAACTTGCATTCCATTATCACCGCATC
EV538881       --> ..................................................
EV524897       --> ..................................................

               351    -    401
UN18786        --> AGATGGGGCAATGGTTGCAAGAGGTGATCTTGGTGCAGAGCTTCCTATTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542798       <-- ..................................................
FD537412       <-- ..................................................
FD529707       <-- ..................................................
EV529784       <-- ..................................................
FD533550       --> AGATGGGGCAATGGTTGCAAGAGGTGATCTTGGTGCAGAGCTTCCTATTT
EV538881       --> ..................................................
EV524897       --> ..................................................

               401    -    451
UN18786        --> AAGAAGTACCCATTCTTCAGGAGAGGATCATTAACCTATGCCGCAGCATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542798       <-- .............................................GCATG
FD537412       <-- ..................................................
FD529707       <-- ..................................................
EV529784       <-- ..................................................
FD533550       --> AAGAAGTACCCATTCTTCAGGAGAGGATCATTAACCTATGCCGCAGCATG
EV538881       --> .............................................GCATG
EV524897       --> ..................................................

               451    -    501
UN18786        --> GGAAAAGCTGTTATTGTTGCGACTAACATGCTTGAGAGTATGATAGTTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542798       <-- GGAAAAGCTGTTATTGTTGCGACTAACATGCTTGAGAGTATGATAGTTCA
FD537412       <-- ............ATTGTTGCGATTAACATGCTTGAGAGTATGATAGTTCA
FD529707       <-- ..................................................
EV529784       <-- ..................................................
FD533550       --> GGAAAAGCTGTTATTGTTGCCACTAACATGCTTGAGAGTATGATAGTTCA
EV538881       --> GGAAAAGCTGTTATTGTTGCGACTAACATGCTTGAGAGTATGATAGTTCA
EV524897       --> ..................................................

               501    -    551
UN18786        --> CCCAACTCCAACCCGGGCGGAGGTTTCTGACATTGCTATAGCTGTTAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542798       <-- CCCAACCCCAACCCGGGCGGAGGTTTCTGACATTGCTATAGCTGTTAGAG
FD537412       <-- CCCAACTCCAACCCGGGCGGAGGTTTCTGACATTGCTATAGCTGTTAGAG
FD529707       <-- ........................................GCTGTTAGAG
EV529784       <-- ..................................................
FD533550       --> CCCAACTCCAACCCGGGCGGAGGTTTCTGACATTGCCATAGCTGTTAGAG
EV538881       --> CCCAACCCCAACCCGGGCGGAGGTTTCTGACATTGCTATAGCTGTTAGAG
EV524897       --> ..................................................

               551    -    601
UN18786        --> AAGGTGCTGATGCAGTAATGCTTTCAGGAGAAACTGCTCACGGAAAGTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542798       <-- AAGGTGCTGATGCAGTAATGCTTTCAGGAGAAACTGCTCATGGAAAGTTC
FD537412       <-- AAGGTGCTGATGCAGTAATGCTTTCAGGAGAAACTGCTCACGGAAAGTTC
FD529707       <-- AAGGTGCTGATGCAGTAATGCTTTCAGGAGAAACTGCTCACGGAAAGTTC
EV529784       <-- ..................................................
FD533550       --> AAGGTGCTGATGCAGTAATGCTTTCAGGAGAAACTGCTCACGGAAAGTTC
EV538881       --> AAGGTGCTGATGCAGTAATGCTTTCAGGAGAAACTGCTCATGGAAAGTTC
EV524897       --> ..................................................

               601    -    651
UN18786        --> CCGTTGAAAGCTGCTGGAGTGATGCATACAGTTGCACTGCGAACAGAAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542798       <-- CCGTTGAAAGCTGCTGGAGTGATGCATACAGTTGCACTGCGAACAGAAGC
FD537412       <-- CCGTTGAAAGCTGCTGGAGTGATGCATACAGTTGCACTGCGAACAGAAGC
FD529707       <-- CCGTTGAAAGCTGCTGGAGTGATGCATACAGTTGCACTGCGAACAGAAGC
EV529784       <-- ...........................................gAGAAGC
FD533550       --> CCGTTGAAAGCTGCTGGAGTGATGCATACAGTTGCACTGCGAACAGAAGC
EV538881       --> CCGTTGAAAGCTGCTGGAGTGATGCATACAGTTGCACTGCGAACAGAAGC
EV524897       --> ...........................................gAGAAGC

               651    -    701
UN18786        --> AACCATTACTACTAGTAGTGAAATGCCACCTAATCTTGGTCAAGCCTTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542798       <-- AACCATTACTACTAGTAGTGAAATGCCACCTAATCTTGGTCAAGCCTTCA
FD537412       <-- AACCATTACTACTAGTAGTGAAATGCCACCTAATCTTGGTCAAGCCTTCA
FD529707       <-- AACCATTACTACTAGTAGTGAAATGCCACCTAATTTTGGTCAAGCCTTCA
EV529784       <-- AACCATTACTACTAGTAGTGAAATGCCACCTAATCTTGGTCAAGCCTTCA
FD533550       --> AACCATTACTACTAGTAGTGAAATGCCACCTAATCTTGGTCAAGCCTTCA
EV538881       --> AACCATTACTACTAGTAGTGAAATGCCACCTAATCTTGGTCAAGCCTTCA
EV524897       --> AACCATTACTACTAGTAGTGAAATGCCACCTAATCTTGGTCAAGCCTTCA

               701    -    751
UN18786        --> AGAACCATATGAGTGAGATGTTTGCATACCATGCAACCATGATGTCGAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542798       <-- AGAACCATATGAGTGAGATGTTTGCATACCATGCAACCATGATGTCGAAC
FD537412       <-- AGAACCATATGAGTGAGATGTTTGCATACCATGCAACCATGATGTCGAAC
FD529707       <-- AGAACCATATGAGTGAGATGTTTGCATACCATGCAACCATGATGTCGAAC
EV529784       <-- AGAACCATATGAGTGAGATGTTTGCATACCATGCAACCATGATGTCGAAC
FD533550       --> -G-ACCATATGAGTGAGATGTTTGCATACCATGCAACCATGATGTCGA-C
EV538881       --> AGAACCATATGAGTGAGATGTTTGCATACCATGCAACCATGATGTCGAAC
EV524897       --> AGAACCATATGAGTGAGATGTTTGCATACCATGCAACCATGATGTCGAAC

               751    -    801
UN18786        --> ACACTTGGAACTTCAACTGTTGTTTTCACCAGGACCGGTTTCATGGCCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542798       <-- ACACTTGGAACTTCAACTGTTGTTTTCACCAGGACCGGTTTCATGGCCAT
FD537412       <-- ACACTTGGAACTTCAACTGTTGTTTTCACCAGGACCGGTTTCATGGCCAT
FD529707       <-- ACACTTGGAACTTCAACTGTTGTTTTCACCAGGACCGGTTTCATGGCCAT
EV529784       <-- ACACTTGGAACTTCAACTGTTGTTTTCACCAGGACCGGTTTCATGGCCAT
FD533550       --> ACACTTGGAACTTCA-CTGTTGTTTTCACCAGGA................
EV538881       --> ACACTTGGAACTTCAACTGTTGTTTTCACCAGGACCGGTTTCATGGCCAT
EV524897       --> ACACTTGGAACTTCAACTGTTGTTTTCACCAGGACCGGTTTCATGGCCAT

               801    -    851
UN18786        --> ACTTTTGAGTCACTATCGCCCTTTTGGCACAATTTATGCCTTCACAAATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542798       <-- ACTTTTGAGTCACTATCGCCCTTTTGGCACAATTTATGCCTTCACAAATG
FD537412       <-- ACTTTTGAGTCACTATCGCCCTTTTGGCACAATTTATGCCTTCACAAACG
FD529707       <-- ACTTTTGAGTCACTATCGCCCTTTTGGCACAATTTATGCCTTCACAAATG
EV529784       <-- ACTTTTGAGTCACTATCGCCCTTCTGGCACAATCTATGCCTTCACAAATG
FD533550       --> ..................................................
EV538881       --> ACTTTTGAGTCACTATCGCCCTTCTGGCACAATCTATGCCTTCACAAATG
EV524897       --> ACTTTTGAGTCACTATCGCCCTTCTGGCACAATCTATGCCTTCACAAATG

               851    -    901
UN18786        --> AGAAAAAAA-TACAGCAAAGATTAGCCTTGTATCAAGGTGTGTGCCCCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542798       <-- AGAAAAAAA-TACAGCAAAGATTAGCCTTGTATCAAGGTGTGTGCCCCAT
FD537412       <-- AGAAAAAAAATACAGCAAAGATTAGCCTTGTATCAAGGTGTGTGCCCCAT
FD529707       <-- AGAAAAAAA-TACAGCAAAGATTAGCCTTGTATCAAGGTGTGTGCCCCAT
EV529784       <-- AGAAAAAAA-TACAGCAAAGATTAGCCTTGTATCAAGGTGTGTGCCCCAT
FD533550       --> ..................................................
EV538881       --> AGAAAAAAA-TACAGCAAAGATTAGCCTTGTATCAAGGTGTGTGCCCCAT
EV524897       --> AGAAAAAAA-TACAGCAAAGATTAGCCTTGTATCAAGGTGTGTGCCCCAT

               901    -    951
UN18786        --> ATATATGGAGTTTTCAGATGATGCAGAGGACACTTTCACTAAAGCTTTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542798       <-- ATATATGGAGTTTTCAGATGATGCAGAGGACACTTTCACTAAAGCTTTGT
FD537412       <-- ATATATGGAGTTCTCAGATGATGCAGAGGACACTTTCACTAAAGCTTTGT
FD529707       <-- ATATATGGAGTTTTCAGATGATGCAGAGGACACTTTCACTAAAGCTTTGT
EV529784       <-- ATATATGGAGTTTTCAGATGATGCAGAGGACACTTTCACTAAAGCTTTGT
FD533550       --> ..................................................
EV538881       --> ATATATGGAGTTCTCAGATGATGCAGAGGACACTTTCACTAAAGCTTTGT
EV524897       --> ATATATGGAGTTCTCAGATGATGCAGAGGACACTTTCACTAAAGCTTTGT

               951    -   1001
UN18786        --> CTACACTACTGAAACAAGGAATGGTGAAGAAGGGAGAGGAAATAGCGATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542798       <-- CTACACTACTGAAACAAGGAATGGTGAAGAAGGGAGAGGAAATAGCGATT
FD537412       <-- CTACACTACTGAAACAAGGAATGGTGAAGAAGGGAGAGGAAATAGCGATT
FD529707       <-- CTACACTACTGAAACAAGGAATGGTGAAGAAGGGAGAGGAAATAGCGATT
EV529784       <-- CTACACTACTGAAACAAGGAATGGTGAAGAAGGGAGAGGAAATAGCGATT
FD533550       --> ..................................................
EV538881       --> CTACACTACTGAAACAAGGAATGGTGAAGAAGGGAGAGGAAATAGCGATT
EV524897       --> CTACACTACTGAAACAAGGAATGGTGAAGAAGGGAGAGGAAATAGCGATT

               1001   -   1051
UN18786        --> GTACAGAGCGGTTCACAACCAATCTGGCGGTCTCAATCGACTCATAACAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542798       <-- GTACAGAGCGGTTCACAACCAATCTGGCGGTCTCAATCGACTCATAACAT
FD537412       <-- GTACAGAGCGGTTCACAACCAATCTGGCGGTCTCAATCGACTCATAACAT
FD529707       <-- GTACAGAGCGGTTCACAACCAATCTGGCGGTCTCAATCGACTCATAACAT
EV529784       <-- GTACAGAGCGGTTCACAATCAATCTGGCGGTCTCAATCGACTCATAACAT
FD533550       --> ..................................................
EV538881       --> GTACAGAGCGGTTCACAACCAATCTGGCGGTCTCAATCGACTCATAACAT
EV524897       --> GTACAGAGCGGTTCACAATCAATCTGGCGGTCTCAATCGACTCATAACAT

               1051   -   1101
UN18786        --> CCAAGTCCGCAAGGTGTAAAGCCTTTTAAGGAGTCTCGGTATTTATTTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542798       <-- CCAAGTC---CGGGTGTAAAGCCTTTTAAAGAGTCTCAGTATTTATTTTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD537412       <-- CCAAGTCCGCAAGGTGTAAAGCCTTTTAAGGAGTCTCAGTATTTATTTTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD529707       <-- CCAAGTCCGCAAGGTGTAAAGCCTTTTAAGGAGTCTCGGTATTTATTTTC  Raphanus raphanistrum subsp. maritimus
EV529784       <-- CCAAGTCCGCAAGGTGTAAAGCCTTTTAAGGAGTCTCGGTATTTATTTTC  Raphanus raphanistrum subsp. maritimus
FD533550       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV538881       --> CCAAGTCCG---GGTGTAAAGCCTTTTAAAGAGTCTCAGTATTTATTTTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV524897       --> CCAAGTCCGCAAGGTGTAAAGCCTTTTAAGGAGTCTCGGTATTTATTTTC  Raphanus raphanistrum subsp. maritimus

               1101   -   1151
UN18786        --> ACATGGTCAGTGTTTTTTTTGTTTCATTTATCTGTAAAACCGGTTTCGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542798       <-- ACATGGTCAGTGTTTTTTTT-TTTCATTTATCTGTATAACCGGTTTCGGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD537412       <-- ACATGGTCAGTGTTTTTT---TTTCATTTATCTGTAAAACCGGTTTCGGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD529707       <-- ACATGGTCAGTGTTTTTTTTGTTTCATTTATCTGTAAAACCGGTTTCGGT  Raphanus raphanistrum subsp. maritimus
EV529784       <-- ACATGGTCAGTGTTTTTTTTGTTTCATTTATCTGTAAAACCGGTTTCGGT  Raphanus raphanistrum subsp. maritimus
FD533550       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV538881       --> ACATGGTCAGTGTTTTTTTT-TTTCATTTATCTGTATAACCGGTTTCGGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV524897       --> ACATGGTCAGTGTTTTTTTTGTTTCATTTATCTGTAAAACCGGTTTCGGT  Raphanus raphanistrum subsp. maritimus

               1151   -   1201
UN18786        --> TAACTTTCCTTGCACGTACGTCCTTTTGTACTCTAAAACCTACGGTTTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542798       <-- TAACTTTCCTTGCACGTACGTCCTTTTGTACTCTAAAACCTACGGTTTAC
FD537412       <-- TAACTTTCCTTGCACGTACGTCCTTTTGTACTCTAAAACCTACGGTTTAC
FD529707       <-- TAACTTTCCTTGCACGTACGTCCTTTTGTACTCTAAAACCTACGGTTTAC
EV529784       <-- TAACTTTCCTTGCACGTACGTCCTTTTGTACTCTAAAACCTACGGTTTAC
FD533550       --> ..................................................
EV538881       --> TAACTTTCCTTGCACGTACGTCCTTTTGTACTCTAAAACCTACGGTTTAC
EV524897       --> TAACTTTCCTTGCACGTACGTCCTTTTGTACTCTAAAACCTACGGTTTAC

               1201   -   1251
UN18786        --> TGTATCTTATTCAGTTTGTTTTACTTGGCAGACGTTATTGTTTTTTTTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542798       <-- TGTATCTTATTCAGTTTGTTTTACTTGGCAGACGTT..............
FD537412       <-- TGTATCTTATTCAGTTT.................................
FD529707       <-- TGTATCTTATTCAGTTTGTTTTACTTGGCAGACGTTATTGTTTTTTTTTT
EV529784       <-- TGTATCTTATTCAGTTTGTTTTACTTGGCc....................
FD533550       --> ..................................................
EV538881       --> TGTATCTTATTCAGTTTGTTTTACTTGGCAGACGTTAaaa..........
EV524897       --> TGTATCTTATTCAGTTTGTTTTACTTGGCc....................

               1251   -   1301
UN18786        --> TCCCTCAATGATTTATTAG
                   ~~~~~~~~~~~~~~~~~~~
EV542798       <-- ...................
FD537412       <-- ...................
FD529707       <-- TCCCTCAATGATTTATTAG
EV529784       <-- ...................
FD533550       --> ...................
EV538881       --> ...................
EV524897       --> ...................