1      -     51
UN18820        --> AAGGATTCCAAGAGCAATCCACCATTGTGGATGGTCTTAGCATCAAGCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW716528       <-- AAGGATTCCAAGAGCAATCCACCATTGTGGATGGTCTTAGCATCAAGCAA
EX748247       <-- ..................................................
FD964118       <-- ..................................................
EX758336       <-- ..................................................
FD965380       <-- ..................................................
EY930381       <-- ..................................................
EW721930       --> AAGGATTCCAAGAGCAATCCACCATTGTGGATGGTCTTAGCATCAAGCAA
EY926600       --> AAGGATTCCAAGAGCAATCCACCATTGTGGATGGTCTTAGCATCAAGCAA
EX761725       --> ..............aaagcaattaggagcattagcaTTAACATCAAGCAA
FD538754       --> ............ctaaagcaattaggagcattagcaTTAACATCAAGCAA
EX752241       --> ..................................................

               51     -    101
UN18820        --> ACCATACAAAA-TATAGATACCAAAATCCCATATAAGAACAATAATACAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW716528       <-- ACCATACAAAAATATAGATACCAAAATCCCATATAAGAACAATAATACAA
EX748247       <-- ..CATACAAAA-TATAGATACCAAA-TCCCTTATAAGAACAATAATACAA
FD964118       <-- ................GATACCAAAATCCCATATAAGAACAATAATACAA
EX758336       <-- .......................AAATCCCATATAAGAACAATAATACAA
FD965380       <-- ..................................................
EY930381       <-- ..................................................
EW721930       --> ACCATACAAAA-TATAGATACCAAAATCCCATATAAGAACAATAATACAA
EY926600       --> ACCATACAAAA-TATAGATACCAAAATCCCATATAAGAACAATAATACAA
EX761725       --> ACCATACAAAA-TATATATACCAAAATCCCATATAAGAACAATAATACAA
FD538754       --> ACCATACAAAA-TATAGATACCAAAATCCCATATAAGAACAATAATACAA
EX752241       --> ..................................................

               101    -    151
UN18820        --> TCCACAAGATAACATATGGCACTATATCCTTTTCACTGATCTCCACAATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW716528       <-- TCCACAAGACAACATATGGCACTATATCCTTTTCACTGATCTCCACAGTA
EX748247       <-- TCCACAAGATAACATATGGCACTATATC-TTTTCACTGATCTCCACAATA
FD964118       <-- TCCACAAGATAACATATGGCACTATATCCTTTTCACTGATCTCCACAATA
EX758336       <-- TCCACAAGATAACATATGGCACTATATCATTTTCACTGGTCACCACAATA
FD965380       <-- .....AAGATAACATATGGCACTATATCCTTTTCACTGATCTCCACAATA
EY930381       <-- ..................................................
EW721930       --> TCCACAAGACAACATATGGCACTATATCCTTTTCACTGATCTCCACAGTA
EY926600       --> TCCACAAGACAACATATGGCACTATATCCTTTTCACTGATCTCCACAGTA
EX761725       --> TCCACAAGATAACATATGGCACTATATCATTTTCACTGGTCACCACAATA
FD538754       --> TCCACAAGATAACATGTGGCACTATATCCTTTTCACTGATCTCCACAATA
EX752241       --> ..........................................CCACAATA

               151    -    201
UN18820        --> CTATCAGCCTCTAGGTTTTATTATACTCGCAATCTGGAGAAAAATGATAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW716528       <-- CTATCAGTCTCTAGGTTTTATTATACTCGCAATCTGGAGAAAAATGATAC  Raphanus sativus var. oleiformis
EX748247       <-- CTATCAGCCTCTAGGTTTTATTATACTCGCAATCTGGAGAAAAATGATAC  Raphanus raphanistrum subsp. maritimus
FD964118       <-- CTATCAGCCTCTAGGTTTTATTATACTCGCAATCTGGAGAAAAATGATAC  Raphanus raphanistrum subsp. maritimus
EX758336       <-- CTATCAGACTCTAGGTTTTATTATACTCGCAATCTGGAGAAAAATGATAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD965380       <-- CTATCAGCCTCTAGGTTTTATTATACTCGCAATCTGGAGAAAAATGATAC  Raphanus raphanistrum subsp. maritimus
EY930381       <-- ..................................................  Raphanus sativus var. oleiformis
EW721930       --> CTATCAGTCTCTAGGTTTTATTATACTCGCAATCTGGAAAAAAATGATAC  Raphanus sativus var. oleiformis
EY926600       --> CTATCAGTCTCTAGGT..................................  Raphanus sativus var. oleiformis
EX761725       --> CTATCAGACTCTAGGTTTTATTATACTCGCAATCTGGAGAAAAATGATAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD538754       --> CTATCAG--------TTTTATTATACTCGCAATCTGGAGAAAAATGATAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX752241       --> CTATCAGCCTCTAGGTTTTATTATACTCGCAATCTGGAGAAAAATGATAC  Raphanus raphanistrum subsp. maritimus

               201    -    251
UN18820        --> ATAGAACATACTCTTAGCACAGATTTCATTCAAACCGAAGGAGCATCGCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW716528       <-- ACAGAACATACTCTTAGCACAGATT-CATTCAAACCGAAGGAGCATCGCG
EX748247       <-- ATAGAACATACTCTTAGCACAGATTTCATTCAAACCGAAGGAGCATCGCG
FD964118       <-- ATAGAACATACTCTTAGCACAGATTTCATTCAAACCGAAGGAGCATCGCG
EX758336       <-- ATAGAACATACTCTTAGCACAGATTTCATTCAAACCGAAGGAGCATCGCG
FD965380       <-- ATAGAACATACTCTTAGCACAGATTTCATTCAAACCGAAGGAGCATCGCG
EY930381       <-- ..................................................
EW721930       --> ACAGAACATACTCTTAGCACAGATT-CATTCAAACCGAAGGAGCATCGCG
EY926600       --> ..................................................
EX761725       --> ATAGAACATACTCTTAGCACAGATTTCATTCAAACCGAAGGAGCATCGCG
FD538754       --> ATAGAACATACTCTTAGCACAGATTTCATTCAAACCGAAGGAGCATCGCG
EX752241       --> ATAGAACATACTCTTAGCACAGATTTCATTCAAACCGAAGGAGCATCGCG

               251    -    301
UN18820        --> TAGGGCATTGTTGAACTCGTCCCTTCCCTTTCCTTGAGGATTCCTCTTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW716528       <-- TAGGGCATTGTTGAACTCGTCCCTTCCCTTTCCTTGAGGATTCCTCTTCC
EX748247       <-- TAGGGCATTGTTGAACTCGTCCCTTCCCTTTCCTTGAGGATTCCTCTTCC
FD964118       <-- TAGGGCATTGTTGAACTCGTCCCTTCCCTTTCCTTGAGGATTCCTCTTCC
EX758336       <-- TAGGGCATTGTTGAACTCGTCCCTTCCCTTTCCTTAAGGATTCCTCTTCC
FD965380       <-- TAGAGCATTGTTGAACTCGTCCCTTCCCTTTCCTTGAGGATTCCTCTTCC
EY930381       <-- ...................TCCCTTCCCTTTCCTTGAGGATTCCTCTTCC
EW721930       --> TAGGGCATTGTTGAACTCGTCCCTTCCCTTTCCTTGAGGATTCCTCTTCC
EY926600       --> ..................................................
EX761725       --> TAGGGCATTGTTGAACTCGTCCCTTCCCTTTCCTTAAGGATTCCTCTTCC
FD538754       --> TAAGGCATTGTTGAACTCGTCCCTTCCCTTTCCTTGAGGATTCCTTTTCC
EX752241       --> TAGGGCATTGTTGAACTCGTCCCTTCCCTTTCCTTGAGGATTCCTCTTCC

               301    -    351
UN18820        --> ATTCCATGATTTCTTTGAACGTCTTTATGAATTCCTTCATGTGTAGGCGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW716528       <-- ATTCCATGATTTCTTTGAACGTCTTTATGAATTCCTTCATGTGTAGGCGT  Raphanus sativus var. oleiformis
EX748247       <-- ATTCCATGATTTCTTTGAACGTCTTTATGAATTCCTTTATGTGTAGGCGT  Raphanus raphanistrum subsp. maritimus
FD964118       <-- ATTCCATGATTTCTTTGAACGTCTTTATGAATTCCTTTATGTGTAGGCGT  Raphanus raphanistrum subsp. maritimus
EX758336       <-- ATTCCATTATTTCTTTGAACGTCTTTATGAATTCCTTCATGTGTAGGCGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD965380       <-- ATTCCATGATTTCTTTGAACGTCTTTATGAATTCCTTTATGTGTAGGCGT  Raphanus raphanistrum subsp. maritimus
EY930381       <-- ATTCCATGATTTCTTTGAACGTCTTTATGAATTCCTTCATGTGTAGGCGT  Raphanus sativus var. oleiformis
EW721930       --> ATTCCATGATTTCTTTGAACGTCTTTATGAATTCCTTCATGTGTAGGCGT  Raphanus sativus var. oleiformis
EY926600       --> ..................................................  Raphanus sativus var. oleiformis
EX761725       --> ATTCCATTATTTCTTTGAACGTCTTTATGAATTCCTTCATGTGTAGGCGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD538754       --> ATTCCATGATTTCTTTGAACGTCTTCATGAATTCCTTCATGTGTAGGCGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX752241       --> ATTCCATGATTTCTTTGAACGTCTTTATGAATTCCTTTATGTGTAGGCGT  Raphanus raphanistrum subsp. maritimus

               351    -    401
UN18820        --> TTCCATTCCTCAAAATCCCATTCTCCTCCGATATCAGGATCATCTTTATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW716528       <-- TTCCATTCCTCAAAATCCCATTCTCCTCCGATATCAGGATCATCTTTATT
EX748247       <-- CTCCATTCCTCAAAATCCCATTCTCCTCCGATATCAGGATCATCTTTATT
FD964118       <-- TTCCATTCCTCAAAATCCCATTCTCCTCCGATATCAGGATCATCTTTATT
EX758336       <-- TTCCATTCCTCAAAATCCCATTCTCCTCCGATATCAGGATCATCTTTATT
FD965380       <-- TTCCATTCCTCAAAATCCCATTCTCCTCCGATATCAGGATCATCTTTATT
EY930381       <-- TTCCATTCCTCAAAATCCCATTCTCCTCCGATATCAGGATCATCTTTATT
EW721930       --> TTCCATTCCTCAAAATCCCATTCTCCTCCGATATCAGGATCATCTTTATT
EY926600       --> ..................................................
EX761725       --> TTCCATTCCTCAAAATCCCATTCTCCTCCGATATCAGGATCATCTTTATT
FD538754       --> CTCCATTCCTCAAAATCCCATTCTCCTCCGATATCAGGATCATCTTTATT
EX752241       --> CTCCATTCCTCAAAATCCCATTCTCCTCCGATATCAGGATCATCTTTATT

               401    -    451
UN18820        --> GATCCATATATATGTTTTCACAGTCATCTTCTCAGAATTGTCCTCTCGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW716528       <-- GATCCATATATATGTTTTCACAGTCATCTTCTCAGAATTGTCCTCTCGTA
EX748247       <-- GATCCATATATATGTTTTCACAGTCATCTTCTCAGAATTGTCCTCTCGTA
FD964118       <-- GATCCATATATATGTTTTCACAGTCATCTTCTCAGAATTGTCCTCTCGTA
EX758336       <-- GATCCATATATATGTTTTCACAGTCATCTTCTCAGAATTGTCCTCTCGTA
FD965380       <-- GATCCATATATATGTTTTCACAGTCATCTTCTCAGAATTGTCCTCTCGTA
EY930381       <-- GATCCATATATATGTTTTCACAGTCATCTTCTCAGAATTGTCCTCTCGTA
EW721930       --> GATCCATATATATGTTTTCACAGTCATCTTCTCAGAATTGTCCTCTCGTA
EY926600       --> ..................................................
EX761725       --> GATCCATATATATGTTTTCACAGTCATCTTCTCAGAATTGTCCTCTCGTA
FD538754       --> GATCCATATATATGTTTTCACAGTCATCTTCTCAGAATTGTCCTCTCGTA
EX752241       --> GATCCATATATATGTTTTCACAGTCATCTTCTCAGAATTGTCCTCTCGTA

               451    -    501
UN18820        --> CGACACCAACTGTCACTCTCTCATATTCATTACCCTCAACAGTATCTAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW716528       <-- CGACACCAACTGTCACTCTCTCATATTCATTACCCTCAACAGTATCTAAA
EX748247       <-- CGACACCAACTGTCACTCTCTCATATTCATTACCCTCAACAGTATCTAAA
FD964118       <-- CGACACCAACTGTCACTCTCTCATATTCATTACCCTCAACAGTATCTAAA
EX758336       <-- CGACACCAACTGTCACTCTCTCATATTCATTACCCTCAACAGTATCTAAA
FD965380       <-- CGACACCAACTGTCACTCTCTCATATTCATTACCCTCAACAGTATCTAAA
EY930381       <-- CGACACCAACTGTCACTCTCTCATATTCATTACCCTCAACAGTATCTAAA
EW721930       --> CGACACCAACTGTCACTCTCTCATATTCATTACCCTCAACAGTATCTAAA
EY926600       --> ..................................................
EX761725       --> CGACACCAACTGTCACTCTCTCATATTCATTACCCTCAACAGTATCTAAA
FD538754       --> CGACACCAACTGTCACTCTCCCATATTCATTACCCTCAACAGTATCTAAA
EX752241       --> CGACACCAACTGTCACTCTCTCATATTCATTACCCTCAACAGTATCTAAA

               501    -    551
UN18820        --> TTCTCAAGTTCTTCATCTGTTAATCCCATTAGTAACTTTCCATGAACTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW716528       <-- TTCTCAAGTTCTTCATCTGTTAATCCCATTAGTAACTTTCCATGAACTTC
EX748247       <-- TTCTCAAGTTCTTCATCTGTTAATCCCATTAGTAACTTTCCATGAACTTC
FD964118       <-- TTCTCAAGTTCTTCATCTGTTAATCCCATTAGTAACTTTCCATGAACTTC
EX758336       <-- TTCTCAAGTTCTTCATCTGTTAATCCCATTAGTAACTTTCCATGAACTTC
FD965380       <-- TTCTCAAGTTCTTCATCTGTTAATCCCATTAGTAACTTTCCATGAACTTC
EY930381       <-- TTCTCAAGTTCTTCATCTGTTAATCCCATTAGTAACTTTCCATGAACTTC
EW721930       --> TTCTCAAGTTCTTCATCTGTTAATCCCATTAGTAACTTTCCATGAACTTC
EY926600       --> ..................................................
EX761725       --> TTCTCAAGTTCTTCATCTGTTAATCCCATTAGTAACTTTCCATGAACTTC
FD538754       --> TTCTCAAGTTCTTCATCTGTTAATCCCATTAGTAACTTTCCATGAACTTC
EX752241       --> TTCTCAAGTTCTTCATCTGTTAATCCCATTAGTAACTTTCCATGAACTTC

               551    -    601
UN18820        --> TCCATCTTCAGACGGTATAACACATGGATACTGACGTCCTTTAAGCCTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW716528       <-- TCCATCTTCAGACGGTATAACACATGGATACTGACGTCCTTTAAGCCTAA
EX748247       <-- TCCATCTTCAGACGGTATAACACATGGATACTGACGTCCTTTAAGCCTAA
FD964118       <-- TCCATCTTCAGACGGTATAACACATGGATACTGACGTCCTTTAAGCCTAA
EX758336       <-- TCCATCTTCAGACGGGATAACACATGGATACTGACGTCCTTTAAGCCTAA
FD965380       <-- TCCATCTTCAGACGGTATAACACATGGATACTGACGTCCTTTAAGCCTAA
EY930381       <-- TCCATCTTCAGACGGTATAACACATGGATACTGACGTCCTTTAAGCCTAA
EW721930       --> TCCATCTTCAGACGGTATAACACATGGATACTGACGTCCTTTAAGCCTAA
EY926600       --> ..................................................
EX761725       --> TCCATCTTCAGACGGGATAACACATGGATACTGACGTCCTTTAAGCCTAA
FD538754       --> TCCATCTTCAGACGGTATAACACATGGATACTGACGTCCTTTAAGCCTAA
EX752241       --> TCCATCTTCAGACGGTATAACACATGGATACTGACGTCCTTTAAGCCTAA

               601    -    651
UN18820        --> ACCTCTTAAAGCCAGGGAGTGTTACAGAGATGATTT-CAGGAGTACGATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW716528       <-- ACCTCTTAAAGCCAGGGAGTGTTACAGAGATGATTTTCAGGAGTACGATC
EX748247       <-- ACCTCTTAAAGCCAGGGAGTGTTACAGAGATGATTT-CAGGAGTACGATC
FD964118       <-- ACCTCTTAAAGCCAGGGAGTGTTACAGAGATGATTT-CAGGAGTACGATC
EX758336       <-- ACCTCTTAAAGCCAGGGAGTGTTACAGAGATGATTT-CAGGAGTACGATC
FD965380       <-- ACCTCTTAAAGCCAGGGAGTGTTACAGAGATGATTT-CAGGAGTACGATC
EY930381       <-- ACCTCTTAAAGCCAGGGAGTGTTACAGAGATGATTTTCAGGAGTACGATC
EW721930       --> ACCTCTTAAAGCCAGGGAGTGTTACAGAGATGATTTTCAGGAGTACGATC
EY926600       --> ..................................................
EX761725       --> ACCTCTTAAAGCCAGGGAGTGTTACAGAGATGATTT-CAGGAGTACGATC
FD538754       --> ACCTCTTAAAGCCAGGGAGTGTTACAGAGATGATTT-CAGGAGTACGATC
EX752241       --> ACCTCTTAAAGCCAGGGAGTGTTACAGAGATGATTT-CAGGAGTACGATC

               651    -    701
UN18820        --> AAGCATGACCTTGACGACCTCAGGCTCCTGAAAGCTACCATAGACGAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW716528       <-- AAGCATcc..........................................
EX748247       <-- AAGCATGACCTTGACGACCTCAGGCTCCTGAAAGCTACCATAGACGAAAA
FD964118       <-- AAGCATGACCTTGACGACCTCAGGCTCCTGAAAGCTACCATAGACGAAAA
EX758336       <-- AAGCATGACCTTGACGACCTCAGGCTCCTGAAAGCTACCATAGACGAAAA
FD965380       <-- AAGCATGACCTTGACGACCTCAGGCTCCTGAAAGCTACCATAGACGAAAA
EY930381       <-- AAGCATcc..........................................
EW721930       --> AAGCATcc..........................................
EY926600       --> ..................................................
EX761725       --> AAGCATGACCTTGACGACCTCAGGCTCC......................
FD538754       --> AAGCATGACCTTGACGACCTCAGGCTCCTGAAAGCTACCATAGACGAAAA
EX752241       --> AAGCATGACCTTGACGACCTCAGGCTCCTGAAAGCTACCATAGACGAAAA

               701    -    751
UN18820        --> CATTGTGAAGCTGCGTACCGGAGCCACTCATTTTTCTTTTTTTTTTCCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW716528       <-- ..................................................
EX748247       <-- CATTGTGAAGCTGCGTACCGGAGCCACTCATTTTTCTTTTTTTTTTCCTC
FD964118       <-- CATTGTGAAGCTGCGTACCGGAGCCACTCATTTTTCTTTTTTTTT-CCTC
EX758336       <-- CATTGTcc..........................................
FD965380       <-- CATTGTGAAGCTcc....................................
EY930381       <-- ..................................................
EW721930       --> ..................................................
EY926600       --> ..................................................
EX761725       --> ..................................................
FD538754       --> CATTGTGAAGCTGCGCACCGGA............................
EX752241       --> CATTGTGAAGCTGCGTACCGGA............................

               751    -    801
UN18820        --> AGTTTTTTCTCTTT......
                   ~~~~~~~~~~~~~~~~~~~~
EW716528       <-- ....................
EX748247       <-- AGTTTTTTCTCTTTcc....
FD964118       <-- AGTTTTTTCTCTTTatttcc
EX758336       <-- ....................
FD965380       <-- ....................
EY930381       <-- ....................
EW721930       --> ....................
EY926600       --> ....................
EX761725       --> ....................
FD538754       --> ....................
EX752241       --> ....................