Library    |     Search    |     Batch query    |     SNP    |     SSR  

Alignment for radish unigene UN18858

               1      -     51
UN18858        --> GGGGGATCCTTCAAAGCCATTTCGAAACCATTCTTGTATTGAGAAAGAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY928072       <-- ...GGATCCTTCAAAGCCATTTCGAAACCATTCTTGTATTGAGAAAGAGT  Raphanus sativus var. oleiformis
FD581074       <-- ...GGATCCTTCAAAGCCATTTCGAAACCATTCTTGTATTGAGAAAGAGT  Raphanus sativus cv Rat-Tail Radish #3870
FD575497       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD545031       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW713415       --> GGGGGATCCTTCAAAGCCATTTCGAAACCATTCTTGTATTGAGAAAGAGT  Raphanus sativus var. oleiformis
EW713416       --> GGGGGATCCTTCAAAGCCATTTCGAAACCATTCTTGTATTGAGAAAGAGT  Raphanus sativus var. oleiformis
EV536442       --> ...GGATCCTTCAAAGCCATTTCGAAACCATTCTTGTATTGAGAGAGAGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY932314       --> ...GGATCCTTCAAAGCCATTTCGAAACCATTCTTGTATTGAGAAAGAGT  Raphanus sativus var. oleiformis
FD548905       --> ...GGATCCTTCAAAGCCATTTCGAAACCATTCTTGTATTGAGAGAGAGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD576613       --> ...GGATCCTTCAAAGCCATTTCGAAACCATTCTTGTATTGAGAAAGAGT  Raphanus sativus cv Rat-Tail Radish #3870
FD954842       --> ...GGATCCTTCAAAGCCATTTCGAAACCATTCTTGTATTGAGAGAGAGT  Raphanus sativus cv Rat-Tail Radish #3870
FD571712       --> ....GATCCTTCAAAGCCATTTCGAAACCATTCTTGTATTGAGAAAGAGT  Raphanus sativus cv Early Scarlet Globe
FD948447       --> .aggcATCCTTCAAAGCCATTTCGAAACCATTCTTGTATTGAGAGAGAGT  Raphanus sativus cv Early Scarlet Globe
FD540149       --> ........CTTCAAAGCCATTTCGAAACCATTCTTGTACTGAGAGAGAGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FY443450       --> ..................................................  Raphanus sativus cv GSK3-1
FY444021       --> ..................................................  Raphanus sativus cv GSK3-1
FY441293       --> ..................................................  Raphanus sativus cv GSK3-1
FY441211       --> ..................................................  Raphanus sativus cv GSK3-1
EY931292       --> ..................................................  Raphanus sativus var. oleiformis

               51     -    101
UN18858        --> ACACAGACGAAAACAAGAAGAAAGTTTCAACGTTTATTGTCTGTTCTATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY928072       <-- ACACAGACGAAAACAAGAAGAAAGTTTCAACGTTTATTGTCTGTTCTATC
FD581074       <-- ACACAGACGAAAACAAGAAGAAAGTTTCAACGTTTATTGTCTGTTCTATC
FD575497       <-- .....................................TGTCTGTTCTATC
FD545031       <-- ..................................................
EW713415       --> ACACAGACGAAAACAAGAAGAAAGTTTCAACGTTTATTGTCTGTTCTATC
EW713416       --> ACACAGACGAAAACAAGAAGAAAGTTTCAACGTTTATTGTCTGTTCTATC
EV536442       --> ACACAGACGAAAACAAGAAGAAAGTTTCAACCTTTATTGTCTGTTCTATC
EY932314       --> ACACAGACGAAAACAAGAAGAAAGTTTCAACGTTTATTGTCTGTTCTATC
FD548905       --> ACACAGACGAAAACAAGAAGAAAGTTTCAACGTTTATTGTCTGTTCTATC
FD576613       --> ACACAGACGAAAACAAGAAGAAAGTTTCAACGTTTATTGTCTGTTCTATC
FD954842       --> ACACAGACGAAAACAAGAAGAAAGTTTCAACGTTTATTGTCTGTTCTATC
FD571712       --> ACACAGACGAAAACAAGAAGAAAGTTTCAACGTTTATTGTCTGTTCTATC
FD948447       --> ACACAGACGAAAACAAGAAGAAAGTTTCAACGTTTATTGTCTGTTCTATC
FD540149       --> ACACAGACGAAAACAAGAAGAAAGTTTCAACGTTTATTGTCTGTTCTATC
FY443450       --> ................GAAGAA-GTTTCAACGTTTATTGTCTGTTCTATC
FY444021       --> ................GAAGAA-GTTTCAACGTTTATTGTCTGTTCTATC
FY441293       --> ..................................................
FY441211       --> ..................................................
EY931292       --> ..................................................

               101    -    151
UN18858        --> TTTCTCTCTTTCAAGAAACAACATACTTCGAAAACATGGCTCGTTCTCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY928072       <-- TTTCTCTCTTTCAAGAAACAACATACTTCGAAAACATGGCTCGTTCTCTC
FD581074       <-- TTTCTCTCTTTCAAGAAACAACATACTTCGAAAACATGGCTCGTTCTCTC
FD575497       <-- TTTCTCTCTTTCAAGAAACAACATACTTCGAAAACATGGCTCGTTCTCTC
FD545031       <-- ..................................................
EW713415       --> TTTCTCTCTTTCAAGAAACAACATACTTCGAAAACATGGCTCGTTCTCTC
EW713416       --> TTTCTCTCTTTCAAGAAACAACATACTTCGAAAACATGGCTCGTTCTCTC
EV536442       --> TCTCTCTCTTTCAAGAAACCACATACTTCGAAAACATGGCTCGTTCTCTC
EY932314       --> TTTCTCTCTTTCAAGAAACAACATACTTCGAAAACATGGCTCGTTCTCTC
FD548905       --> TTTCTCTCTTTCAAGAAACAACATACTTCGAAAACATGGCTCGTTCTCTC
FD576613       --> TTTCTCTCTTTCAAGAAACAACATACTTCGAAAACATGGCTCGTTCTCTC
FD954842       --> TTTCTCTCTTTCAAGAAACAACATACTTCGAAAACATGGCTCGTTCTCTC
FD571712       --> TTTCTCTCTTTCAAGAAACAACATACTTCGAAAACATGGCTCGTTCTCTC
FD948447       --> TTTCTCTCTTTCAAGAAACAACATACTTCGAAAACATGGCTCGTTCTCTC
FD540149       --> TCTCTCTCTTTCAAGAAACCACATACTTCGAAAACATGGCTCGTTCTCTC
FY443450       --> TTTCTCTCTTTCAAGAAACAACATACTTCGAAAACATGGCTCGTTCTCTC
FY444021       --> TTTCTCTCTTTCAAGAAACAACATACTTCGAAAACATGGCTCGTTCTCTC
FY441293       --> .....................CATACTTCGAAAACATGGCTCGTTCTCTC
FY441211       --> .........................CTTCGAAAACATGGCTCGTTCTCTC
EY931292       --> ..................................................

               151    -    201
UN18858        --> TCTAACGTTAAGATTGTATCTGCTTTCGTCTCTCAAGAACTCTCCAATGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY928072       <-- TCTAACGTTAAGATTGTATCTGCTTTCGTCTCTCAAGAACTCTCCAATGC
FD581074       <-- TCTAACGTTAAGATTGTATCTGCTTTCGTCTCTCAAGAACTCTCCAATGC
FD575497       <-- TCTAACGTTAAGATTGTATCTGCTTTCGTCTCTCAAGAACTCTCCAATGC
FD545031       <-- .....................................AACTCTCCAATGC
EW713415       --> TCTAACGTTAAGATTGTATCTGCTTTCGTCTCTCAAGAACTCTCCAATGC
EW713416       --> TCTAACGTTAAGATTGTATCTGCTTTCGTCTCTCAAGAACTCTCCAATGC
EV536442       --> TCTAACGTTAAGATCGTATCTGCTTTCGTTTCTCAAGAACTCTCCAATGC
EY932314       --> TCTAACGTTAAGATTGTATCTGCTTTCGTCTCTCAAGAACTCTCCAATGC
FD548905       --> TCTAACGTTAAGATTGTATCTGCTTTCGTCTCTCAAGAACTCTCCAATGC
FD576613       --> TCTAACGTTAAGATTGTATCTGCTTTCGTCTCTCAAGAACTCTCCAATGC
FD954842       --> TCTAACGTTAAGATTGTATCTGCTTTCGTCTCTCAAGAACTCTCCAATGC
FD571712       --> TCTAACGTTAAGATTGTATCTGCTTTCGTCTCTCAAGAACTCTCCAATGC
FD948447       --> TCTAACGTTAAGATTGTATCTGCTTTCGTCTCTCAAGAACTCTCCAATGC
FD540149       --> TCTAACGTTAAGATCGTATCTGCTTTCGTTTCTCAAGAACTCTCCAATGC
FY443450       --> TCTAACGTTAAGATTGTATCTGCTTTCGTCTCTCAAGAACTCTCCAATGC
FY444021       --> TCTAACGTTAAGATTGTATCTGCTTTCGTCTCTCAAGAACTCTCCAATGC
FY441293       --> TCTAACGTTAAGATTGTATCTGCTTTCGTCTCTCAAGAACTCTCCAATGC
FY441211       --> TCTAACGTTAAGATTGTATCTGCTTTCGTCTCTCAAGAACTCTCCAATGC
EY931292       --> ..................................................

               201    -    251
UN18858        --> AATCTTCCGACGCGGTTATGCGGCTACGGCGGCGCAAGCGGCCGGTGTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY928072       <-- AATCTTCCGACGCGGTTATGCGGCTACGGCGGCGCAAGCGGCCGGTGTGA
FD581074       <-- AATCTTCCGACGCGGTTATGCGGCTACGGCGGCGCAAGCGGCCGGTGTGA
FD575497       <-- AATCTTCCGACGCGGTTATGCGGCTACGGCGGCGCAAGCGGCCGGTGTGA
FD545031       <-- AATCTTCCGACGCGGTTATGCGGCTACGGCGGCGCAAGCGGCCGGTGGGA
EW713415       --> AATCTTCCGACGCGGTTATGCGGCTACGGCGGCGCAAGCGGCCGGTGTGA
EW713416       --> AATCTTCCGACGCGGTTATGCGGCTACGGCGGCGCAAGCGGCCGGTGTGA
EV536442       --> AATCTTCCGACGCGGTTATGCGGCCACGGCAACGCAAGCGGCCGGTGTGA
EY932314       --> AATCTTCCGACGCGGTTATGCGGCTACGGCGGCGCAAGCGGCCGGTGTGA
FD548905       --> AATCTTCCGACGCGGTTATGCGGCTACGGCGGCGCAAGCGGCCGGTGGGA
FD576613       --> AATCTTCCGACGCGGTTATGCGGCTACGGCGGCGCAAGCGGCCGGTGTGA
FD954842       --> AATCTTCCGACGCGGTTATGCGGCTACGGCGGCGCAAGCGGCCGGTGTGA
FD571712       --> AATCTTCCGACGCGGTTATGCGGCTACGGCGGCGCAAGCGGCCGGTGTGA
FD948447       --> AATCTTCCGACGCGGTTATGCGGCTACGGCGGCGCAAGCGGCCGGTGTGA
FD540149       --> AATCTTCCGACGCGGTTATGCGGCTACGGCGGCGCAAGCGGCCGGTGTGA
FY443450       --> AATCTTCCGACGCGGTTATGCGGCTACGGCGGCGCAAGCGGCCGGTGTGA
FY444021       --> AATCTTCCGACGCGGTTATGCGGCTACGGCGGCGCAAGCGGCCGGTGTGA
FY441293       --> AATCTTCCGACGCGGTTATGCGGCTACGGCGGCGCAAGCGGCCGGTGTGA
FY441211       --> AATCTTCCGACGCGGTTATGCGGCTACGGCGGCGCAAGCGGCCGGTGTGA
EY931292       --> .............................................TGTGA

               251    -    301
UN18858        --> AAGGTGGAGCCGTTGTTTCGGCGGTGATGAAGAAGAAGAGAGTGGAAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY928072       <-- AAGGTGGAGCCGTTGTTTCGGCGGTGATGAAGAAGAAGAGAGTGGAAGAA
FD581074       <-- AAGGTGGAGCCGTTGTTTCGGCGGTGATGAAGAAGAAGAGAGTGGAAGAA
FD575497       <-- AAGGTGGAGTCGTTGCTTCGGCGGTGATGAAGAAGAAGAGAGTGGAAGAA
FD545031       <-- AAGGTGGAGCCGTTGTTTCGGCGGTGATGAAGAAGAAGAGAGTGGAAGAA
EW713415       --> AAGGTGGAGCCGTTGTTTCGGCGGTGATGAAGAAGAAGAGAGTGGAAGAA
EW713416       --> AAGGTGGAGCCGTTGTTTCGGCGGTGATGAAGAAGAAGAGAGTGGAAGAA
EV536442       --> AAGGTGGAGCCGTTGTTTCGGCGGTGATGAAGAAGAAGAGAGTGGAAGAA
EY932314       --> AAGGTGGAGCCGTTGTTTCGGCGGTGATGAAGAAGAAGAGAGTGGAAGAA
FD548905       --> AAGGTGGAGCCGTTGTTTCGGCGGTGATGAAGAAGAAGAGAGTGGAAGAA
FD576613       --> AAGGTGGAGCCGTTGTTTCGGCGGTGATGAAGAAGAAGAGAGTGGAAGAA
FD954842       --> AAGGTGGAGCCGTTGTTTCGGCGGTGATGAAGAAGAAGAGAGTGGAAGAA
FD571712       --> AAGGTGGAGTCGTTGCTTCGGCGGTGATGAAGAAGAAGAGAGTGGAAGAA
FD948447       --> AAGGTGGAGCCGTTGTTTCGGCGGTGATGAAGAAGAAGAGAGTGGAAGAA
FD540149       --> AAGGTGGAGCCGTTGTTTCGGCGGTGATGAAGAAGAAGAGAGTGGAAGAA
FY443450       --> AAGGTGGAGCCGTTGTTTCGGCGGTGATGAAGAAGAAGAGAGTGGAAGAA
FY444021       --> AAGGTGGAGCCGTTGTTTCGGCGGTGATGAAGAAGAAGAGAGTGGAAGAA
FY441293       --> AAGGTGGAGCCGTTGTTTCGGCGGTGATGAAGAAGAAGAGAGTGGAAGAA
FY441211       --> AAGGTGGAGCCGTTGTTTCGGCGGTGATGAAGAAGAAGAGAGTGGAAGAA
EY931292       --> AAGGTGGAGCCGTTGTTTCGGCGGTGATGAAGAAGAAGAGAGTGGAAGAA

               301    -    351
UN18858        --> TCGACCCAAAAGATTGCTTGGATTCCAGACCCCAAAACCGGTTATTACAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY928072       <-- T-GACCCAAAAGATTGCTTGAATTCCAGACCCCAAAACCGGTTATTACAG
FD581074       <-- TCGACCCAAAAGATTGCTTGGATTCCAGACCCCAAAACCGGTTATTACAG
FD575497       <-- TCGACCCAAAAGATTGCTTGGATTCCAGACCCCAAAACCGGTTATTACAG
FD545031       <-- TCGACCCAAAAGATTGCTTGGATTCCAGACCCCAAAACCGGTTATTACAG
EW713415       --> TCGACCCAAAAGATTGCTTGGATTCCAGACCCCAAAACCGGTTATTACAG
EW713416       --> TCGACCCAAAAGATTGCTTGGATTCCAGACCCCAAAACCGGTTATTACAG
EV536442       --> TCGACCCAAAAGATTGCTTGGATTCCAGACCCCAAAACCGGTTATTACAG
EY932314       --> T-GACCCAAAAGATTGCTTGAATTCCAGACCCCAAAACCGGTTATTACAG
FD548905       --> TCGACCCAAAAGATTGCTTGGATTCCAGACCCCAAAACCGGTTATTACAG
FD576613       --> TCGACCCAAAAGATTGCTTGGATTCCAGACCCCAAAACCGGTTATTACAG
FD954842       --> TCGACCCAAAAGATTGCTTGGATTCCAGACCCCAAAACCGGTTATTACAG
FD571712       --> TCGACCCAAAAGATTGCTTGGATTCCAGACCCCAAAACCGGTTATTACAG
FD948447       --> TCGACCCAAAAGATTGCTTGGATTCCAGACCCCAAAACCGGTTATTACAG
FD540149       --> TCGACCCAAAAGATTGCTTGGATTCCAGACCCCAAAACCGGTTATTACAG
FY443450       --> TCGACCCAAAAGATTGCTTGGATTCCAGACCCCAAAACCGGTTATTACAG
FY444021       --> TCGACCCAAAAGATTGCTTGGATTCCAGACCCCAAAACCGGTTATTACAG
FY441293       --> TCGACCCAAAAGATTGCTTGGATTCCAGACCCCAAAACCGGTTATTACAG
FY441211       --> TCGACCCAAAAGATTGCTTGGATTCCAGACCCCAAAACCGGTTATTACAG
EY931292       --> TTGACCCAAAAGATTGCTTGGATTCCAGACCCCAAAACCGGTTATTACAG

               351    -    401
UN18858        --> ACCGGAAACTTGTTCAAAAGAGATAGACCCAGCAGAGCTACGAGCAGCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY928072       <-- ACCGGAAACTTGTTCAAAAGAGATAGACCCAGCAGAGCTACGAGCAGCTC  Raphanus sativus var. oleiformis
FD581074       <-- ACCGGAAACTTGTTCAAAAGAGATAGACCCAGCAGAGCTACGAGCAGCTC  Raphanus sativus cv Rat-Tail Radish #3870
FD575497       <-- ACCGGAAACTTGTTCAAAAGAGATAGACCCAGCAGAGCTACGAGCAGCTC  Raphanus sativus cv Early Scarlet Globe
FD545031       <-- ACCGGAAACTTGTTCAAAGGAGATAGACCCAGCAGAGCTACGAGTAGCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW713415       --> ACCGGAAACTTGTTCAAAAGAGATCGACCCAGCAGAGCTACGAGCAGCCC  Raphanus sativus var. oleiformis
EW713416       --> ACCGGAAACTTGTTCAAAAGAGATCGACCCAGCAGAGCTACGAGCAGCCC  Raphanus sativus var. oleiformis
EV536442       --> ACCGGAAACTTGTTCAAAGGAGATAGACCCAGCAGAGCTACGAGCAGCTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY932314       --> ACCGGAAACTTGTTCAAAAGAGATAGACCCAGCAGAGCTACGAGCAGCTC  Raphanus sativus var. oleiformis
FD548905       --> ACCGGAAACTTGTTCAAAGGAGATAGACCCAGCAGAGCTACGAGTAGCTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD576613       --> ACCGGAAACTTGTTCAAAAGAGATAGACCCAGCAGAGCTACGAGCAGCTC  Raphanus sativus cv Rat-Tail Radish #3870
FD954842       --> ACCGGAAACTTGTTCAAAAGAGATAGACCCAGCAGAGCTACGAGCAGCTC  Raphanus sativus cv Rat-Tail Radish #3870
FD571712       --> ACCGGAAACTTGTTCAAAAGAGATAGACCCAGCAGAGCTACGAGCAGCTC  Raphanus sativus cv Early Scarlet Globe
FD948447       --> ACCGGAAACTTGTTCAAAGGAGATAGACCCAGCAGAGCTACGATCAGCTC  Raphanus sativus cv Early Scarlet Globe
FD540149       --> ACCGGAAACTTGTTCAAAAGAGATCGACCCAGCAGAGCTACGAGCAGCTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FY443450       --> ACCGGAAACTTGTTCAAAGGAGATAGACCCAGCAGAGCTACGAGCAGCTC  Raphanus sativus cv GSK3-1
FY444021       --> ACCGGAAACTTGTTCAAAGGAGATAGACCCAGCAGAGCTACGAGCAGCTC  Raphanus sativus cv GSK3-1
FY441293       --> ACCGGAAACTTGTTCAAAGGAGATAGACCCAGCAGAGCTACGAGCAGCTC  Raphanus sativus cv GSK3-1
FY441211       --> ACCGGAAACTTGTTCAAAGGAGATAGACCCAGCAGAGCTACGAGCAGCTC  Raphanus sativus cv GSK3-1
EY931292       --> ACCGGAAACTTGTTCAAAAGAGATAGACCCAGCAGAGCTACGAGCAGCTC  Raphanus sativus var. oleiformis

               401    -    451
UN18858        --> TCTTGAACAACAAGCAGTAATGAAAAAGAAGAAAAAAACAAGCAGTGATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY928072       <-- TCTTGAACAACAAGCAGTAATGAAAAAGAAGAAAAAAACAAGCAGTGATG  Raphanus sativus var. oleiformis
FD581074       <-- TCTTGAACAACAAGCAGTAATGAAAAAGAAGAAAAAAACAAGCAGTGATG  Raphanus sativus cv Rat-Tail Radish #3870
FD575497       <-- TCTTGAACAACAAGCAGTAATGAAAAAGAAGAAAAAAACAAGCAGTGATG  Raphanus sativus cv Early Scarlet Globe
FD545031       <-- TCTTGAACAACAAGCAGTAATGAAAAA-AA-AAAAAAACAAGCAGTGATG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW713415       --> TCTTGAACAACAAGCAGTAATGAAAAAGAAGAAAAAAACAAGCAGTGATG  Raphanus sativus var. oleiformis
EW713416       --> TCTTGAACAACAAGCAGTAATGAAAAAGAAGAAAAAAACAAGCAGTGATG  Raphanus sativus var. oleiformis
EV536442       --> TCTTGAACAACAAGCAGTAATGAAAAA-AA-AAAAAAACAAGCAGTGATG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY932314       --> TCTTGAACAACAAGCAGTAATGAAAAAGAAGAAAAAAACAAGCAGTGATG  Raphanus sativus var. oleiformis
FD548905       --> TCTTGAACAACAAGCAGTAATGAAAAA-AA-AAAAAAACAAGCAGTGATG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD576613       --> TCTTGAACAACAAGCAGTAATGAAAAAGAAGAAAAAAACAAGCAGTGATG  Raphanus sativus cv Rat-Tail Radish #3870
FD954842       --> TCTTGAACAACAAGCAGTAATGAAAAAGAAGAAAAAAACAAGCAGTGATG  Raphanus sativus cv Rat-Tail Radish #3870
FD571712       --> TCTTGAACAACAAGCAGTAATGAAAAAGAAGAAAAAAACAAGCAGTGATG  Raphanus sativus cv Early Scarlet Globe
FD948447       --> TCTTGAACAACAAGCAGTAATGA----GAA--AAAAAACAAGCAGTGATG  Raphanus sativus cv Early Scarlet Globe
FD540149       --> TCTTGAACAACAAGCAGTAATGAAAAA-AAGAAA----CAAGCAGTGATG  Raphanus raphanistrum subsp. raphanistrum (MS)
FY443450       --> TCTTGAACAACAAGCAGTAATGAAAAA-----AAAAAACAAGCAGTGATG  Raphanus sativus cv GSK3-1
FY444021       --> TCTTGAACAACAAGCAGTAATGAAAAA-----AAAAAACAAGCAGTGATG  Raphanus sativus cv GSK3-1
FY441293       --> TCTTGAACAACAAGCAGTAATGAAAAA-----AAAAAACAAGCAGTGATG  Raphanus sativus cv GSK3-1
FY441211       --> TCTTGAACAACAAGCAGTAATGAAAAA-----AAAAAACAAGCAGTGATG  Raphanus sativus cv GSK3-1
EY931292       --> TCTTGAACAACAAGCAGTAATGAAAAAGAAGAAAAAAACAAGCAGTGATG  Raphanus sativus var. oleiformis

               451    -    501
UN18858        --> AA-TTAACCGAAAAGAAGCGCTTTTTCTGTTAATTATTTGTTGTTAGTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY928072       <-- AA-TTAACCGAAAAGAAGCGCTTTTTCTGTTAATTATTTGTTGTTAGTTT  Raphanus sativus var. oleiformis
FD581074       <-- AA-TTAACCGAAAAGAAGCGCTTTTTCTGTTAATTATTTGTTGTTAGTTT  Raphanus sativus cv Rat-Tail Radish #3870
FD575497       <-- AA-TTAACCGAAAAGAAGCGCTTTTTCTGTTAATTATTTGTTGTTAGTTT  Raphanus sativus cv Early Scarlet Globe
FD545031       <-- AA-TTAACCGAAGA-AAGCTCTTTTTCTGTTAATTATTTGTTGTTAGTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW713415       --> AA-TTAACCGAAAAGAAGCGCTTTTTCTGTTAATTATTTGTTGTTAGTTT  Raphanus sativus var. oleiformis
EW713416       --> AA-TTAACCGAAAAGAAGCGCTTTTTCTGTTAATTATTTGTTGTTAGTTT  Raphanus sativus var. oleiformis
EV536442       --> AA-TTAACCGAAGA-AAGCTCTTTTTCTGTTAATTATTTGTTGTTAGTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY932314       --> AA-TTAACCGAAAAGAAGCGCTTTTTCTGTTAATTATTTGTTGTTAGTTT  Raphanus sativus var. oleiformis
FD548905       --> AA-TTAACCGAAGA-AAGCTCTTTTTCTGTTAATTATTTGTTGTTAGTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD576613       --> AA-TTAACCGAAAAGAAGCGCTTTTTCTGTTAATTATTTGTTGTTAGTTT  Raphanus sativus cv Rat-Tail Radish #3870
FD954842       --> AA-TTAACCGAAAAGAAGCGCTTTTTCTGTTAATTATTTGTTGTTAGTTT  Raphanus sativus cv Rat-Tail Radish #3870
FD571712       --> AA-TTAACCGAAAAGAAGCGCTTTTTCTGTTAATTATTTGTTGTTAGTTT  Raphanus sativus cv Early Scarlet Globe
FD948447       --> AA-TTAACCGAAGA-AAGCTCTTTTTCTGTTAATTATTTGTTGTTAGTTT  Raphanus sativus cv Early Scarlet Globe
FD540149       --> AAATTAACCGAAAAGAAGCTCTTTTTCTGTTAATTATTTGTTGTTAGTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FY443450       --> AA-TTAACCGAAGA-AAGCTCTTTTTCTGTTAATTATTTGTTGTTAGTTT  Raphanus sativus cv GSK3-1
FY444021       --> AA-TTAACCGAAGA-AAGCTCTTTTTCTGTTAATTATTTGTTGTTAGTTT  Raphanus sativus cv GSK3-1
FY441293       --> AA-TTAACCGAAGA-AAGCTCTTTTTCTGTTAATTATTTGTTGTTAGTTT  Raphanus sativus cv GSK3-1
FY441211       --> AA-TTAACCGAAGA-AAGCTCTTTTTCTGTTAATTATTTGTTGTTAGTTT  Raphanus sativus cv GSK3-1
EY931292       --> AA-TTAACCGAAAAGAAGCGCTTTTTCTGTTAATTATTTGTTGTTAGTTT  Raphanus sativus var. oleiformis

               501    -    551
UN18858        --> TAATGTCTTGGTGGAATAGGGTAATGATCCTTTGCGGTGAACCCT-ATGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY928072       <-- TAATGTCTTGGTGGAATAGGGTAATGATCCTTTGCGGTGAACCCT-ATGT  Raphanus sativus var. oleiformis
FD581074       <-- TAATGTCTTGGTGGAATAGGGTAATGATCCTTTGCGGTGAACCCT-ATGT  Raphanus sativus cv Rat-Tail Radish #3870
FD575497       <-- TAATGTCTTGGTGGAATAGGGTAATGATCCTTTGCGGTGAACCCT-ATGT  Raphanus sativus cv Early Scarlet Globe
FD545031       <-- TAATGTCTTGGGGGAATAGGGTAATGATCCTTTGCGGTGAACCCT-ATGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW713415       --> TAATGTCTTGGTGGAATAGGGTAATGATCCTTTGCGGTGAACCCT-ATGT  Raphanus sativus var. oleiformis
EW713416       --> TAATGTCTTGGTGGAATAGGGTAATGATCCTTTGCGGTGAACCCT-ATGT  Raphanus sativus var. oleiformis
EV536442       --> TAATGTCTTGGGGGAATAGGCTAATGATCCTTTGCGGTGAACCCT-ATGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY932314       --> TAATGTCTTGGTGGAATAGGGTAATGATCCTTTGCGGTGAACCCT-ATGT  Raphanus sativus var. oleiformis
FD548905       --> TAATGTCTTGGGGGAATAGGGTAATGATCCTTTGCGGTGAACCCT-ATGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD576613       --> TAATGTCTTGGTGGAATAGGGTAATGATCCTTTGCGGTGAACCCT-ATGT  Raphanus sativus cv Rat-Tail Radish #3870
FD954842       --> TAATGTCTTGGTGGAATAGGGTAATGATCCTTTGCGGTGAACCCT-ATGT  Raphanus sativus cv Rat-Tail Radish #3870
FD571712       --> TAATGTCTTGGTGGAATAGGGTAATGATCCTTTGCGGTGAACCCT-ATGT  Raphanus sativus cv Early Scarlet Globe
FD948447       --> TAATGTCTTGGGGGAATAGGGTAATGATCCTTTGCGGTGAACCCT-ATGT  Raphanus sativus cv Early Scarlet Globe
FD540149       --> TAACGTCTTGGGGGAATAGGGTAATGATCCTTTGCGGTGAACCCTTATGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FY443450       --> TAATGTCTTGGGGGAATAGGGTAATGATCCTTTGCGGTGAACCCT-ATGT  Raphanus sativus cv GSK3-1
FY444021       --> TAATGTCTTGGGGGAATAGGGTAATGATCCTTTGCGGTGAACCCT-ATGT  Raphanus sativus cv GSK3-1
FY441293       --> TAATGTCTTGGGGGAATAGGGTAATGATCCTTTGCGGTGAACCCT-ATGT  Raphanus sativus cv GSK3-1
FY441211       --> TAATGTCTTGGGGGAATAGGGTAATGATCCTTTGCGGTGAACCCT-ATGT  Raphanus sativus cv GSK3-1
EY931292       --> TAATGTCTTGGTGGAATAGGGTAATGATCCTTTGCGGTGAACCCT-ATGT  Raphanus sativus var. oleiformis

               551    -    601
UN18858        --> TTGTCTGTCTGCTACGTGCGATTCTGCAATTAATAACATAGAGAACTCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY928072       <-- TTGTCTGTCTGCTACGTGCGATTCTGCAATTAATAACATAGAGAACTCTT
FD581074       <-- TTGTCTGTCTGCTACATGCAATTCTGCAATTAATAACATAGAGAACTCTT
FD575497       <-- TTGTCTGTCTGCTACGTGCGATTCTGCAATTAATAACATAGAGAACTCTT
FD545031       <-- TTGTCTGTCTGCTACGTGCGATTCTGCAATTAATAACATAGAGAACTCTT
EW713415       --> TTGTCTGTCTGCTACGTGCGATTCTGCAATTAATAACATAGAGAACTCTT
EW713416       --> TTGTCTGTCTGCTACGTGCGATTCTGCAATTAATAACATAGAGAACTCTT
EV536442       --> TTGTCTGTCTGCTACGTGCGATTCTGCAATTAATAACATAGA........
EY932314       --> TTGTCTGTCTGCTACGTGCGATTCTGCAATTAATAACATAGAGAACTCTT
FD548905       --> TTGTCTGTCTGCTACGTGCGATTCTGCAATTAATAACATAGAGAACTCTT
FD576613       --> TTGTCTGTCTGCTACATGCAATTCTGCAATTAATAACATAGAGAACTCTT
FD954842       --> TTGTCTGTCTGCTACGTGCGATTCTGCAATTAATAACATAGAGAACTCTT
FD571712       --> TTGTCTGTCTGCTACGTGCGATTCTGCAATTAATAACATAGAGAACTCTT
FD948447       --> TTGTCTGTCTGCTACGTGCGATTCTGCAATTAATAACATAGAGAACTCTT
FD540149       --> TTGTCTGTCTGCTACGTGCGATTCTGCAATTAATAACATAGAGAACTCTT
FY443450       --> TTGTCTGTCTGCTACGTGCGATTCTGCAATTAATAACATAGAGAACTCTT
FY444021       --> TTGTCTGTCTGCTACGTGCGATTCTGCAATTAATAACATAGAGAACTCTT
FY441293       --> TTGTCTGTCTGCTACGTGCGATTCTGCAATTAATAACATAGAGAACTCTT
FY441211       --> TTGTCTGTCTGCTACGTGCGATTCTGCAATTAATAACATAGAGAACTCTT
EY931292       --> TTGTCTGTCTGCTACGTGCGATTCTGCAATTAATAACATAGAGAACTCTT

               601    -    651
UN18858        --> TTGGTTCCTCTACACTTTGTAACAAAATGATCAATGGATGTATGACTGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY928072       <-- TTGGTTCCTCTACACTTTGT..............................
FD581074       <-- TTGGTTCCTCTACACTTTGT..............................
FD575497       <-- TTGGTTCCTCTACACTTTGTAACAAAATGATCAATGGATGTATGACTGAA
FD545031       <-- TTGGTTCCTCTACACTTTGTAACAAAATGATCAATGGATGTATGACTGAA
EW713415       --> TTGGTTCCTCTACACTTTGTAACAAAATGATCAATGTATGTATGACTGAA
EW713416       --> TTGGTTCCTCTACACTTTGTAACAAAATGATCAATGTATGTATGACTGAA
EV536442       --> ..................................................
EY932314       --> TTGGTTCCTCTACACTTTGTAACAAAAaaa....................
FD548905       --> TTGGTTCCTCTACACTTTGTAACAAAATGATCAATGGATGTATGACTGAA
FD576613       --> TTGGTTCCTCTACACTTTGT..............................
FD954842       --> TTGGTTCCTCTACACTTTGTAACAAAATGATCAATGGATGTATGACTGAA
FD571712       --> TTGGTTCCTCTACACTTTGTAACAAAATGATCAATGGATGTATGACTGAA
FD948447       --> TTGGTTCCTCTACACTTTGTAACAAAATGATCAATGGATGTATGACTGAA
FD540149       --> TTGGTTCCTCTACACTTTGTAACAAAATGATCAATGGATGTATGACTGAA
FY443450       --> TTGGTTCCTCTACACTTTGTAACAAAATGATCAATGGATGTATGACTGAA
FY444021       --> TTGGTTCCTCTACACTTTGTAACAAAATGATCAATGGATGTATGACTGAA
FY441293       --> TTGGTTCCTCTACACTTTGTAACAAAATGATCAATGGATGTATGACTGAA
FY441211       --> TTGGTTCCTCTACACTTTGTAACAAAATGATCAATGGATGTATGACTGAA
EY931292       --> TTGGTTCCTCTACACTTTGTAACAAAATGATCAATGGATGTATGACTGAA

               651    -    701
UN18858        --> AGTATTTATATAATAAACAGTTTAGTTGAAAAGTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY928072       <-- ....................................
FD581074       <-- ....................................
FD575497       <-- AGTATTTATAT.........................
FD545031       <-- AGTATTTATATAATAAACAGTTTAGTTGAAAAGTAC
EW713415       --> AGTATTTATATActccctccgtt.............
EW713416       --> -GTATTTATATActccctccgtttc...........
EV536442       --> ....................................
EY932314       --> ....................................
FD548905       --> AGTATTTATATAATAAACAGTTTAGTTGAAAAGTAC
FD576613       --> ....................................
FD954842       --> AGTATTTAT...........................
FD571712       --> AGTATTTATATA........................
FD948447       --> AGTATTTATATAATAAACAGTTTAGTTG........
FD540149       --> AGTATTTATATAATAAACAGTTTAGTTG........
FY443450       --> AGTATTTATATAATAAACAGTTTAGTTGAAAAGT..
FY444021       --> AGTATTTATATAATAAACAGTTTAGTTGAAAAGT..
FY441293       --> AGTATTTATATAATAAACAGTTTAGTTGAAAAGT..
FY441211       --> AGTATTTATATAATAAACAGTTTAGTTGAAAAGT..
EY931292       --> AGTATTTATATActccctccgtttcaaatt......