Library    |     Search    |     Batch query    |     SNP    |     SSR  

Alignment for radish unigene UN18899

               1      -     51
UN18899        --> GGACACAAAGCAAAATAATGGCTTTGAAACTCTCCTCCTCCTCCTCCTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW718444       <-- ..................................................
FD546166       <-- ..................................................
EW718706       <-- ..................................................
EY910096       <-- ..................................................
FD546185       <-- ..................................................
FD554785       <-- ..................................................
FD550212       --> GGACACAAAGCAAAATAATGGCTTTGAAACTCTCCTCCTCCTCCTCCTCC
FD559002       --> ....ggagAGCAAAATAATGGCTTTGAAACTCTACTC-T-----TCCTGC
EY913958       --> ..........CAAAATAATGGCTTTGAAACTCTCCTCCTCCTCCTCCTCC
FD550192       --> ..........CAAAATAATGGCTTTGAAACTCTCCTCCTCCTCCTCCTCC
EW713746       --> ..................................................
EW713747       --> ..................................................

               51     -    101
UN18899        --> TC---GCCTTCACTTTTCTTCCAATCATCAAGGAGATTCTCTTCTTCGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW718444       <-- ..................................................
FD546166       <-- ..................................................
EW718706       <-- ..................................................
EY910096       <-- ..................................................
FD546185       <-- ..................................................
FD554785       <-- ..................................................
FD550212       --> TCCTCGCCTTCACTTTTCTTCCAATCATCAAGGAGATTCTCTTCTTCGAT
FD559002       --> TC---ACCTTCACTTTTCTTCCAATCATCAAGGAGATTCTCTTCTTCGAT
EY913958       --> TC---GCCTTCACTTTTCTTCCAATCATCAAGGAGATTCTCTTCTTCGAT
FD550192       --> TC---GCCTTCACTTTTCTTCCAATCATCAAGGAGATTCTCTTCTTCGAT
EW713746       --> ..................................................
EW713747       --> ..................................................

               101    -    151
UN18899        --> TAATCCAATTAGATCAAAACCCACGAAAAGATCATCATCTTCCTTTCCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW718444       <-- ..................................................
FD546166       <-- ..................................................
EW718706       <-- ..................................................
EY910096       <-- ..................................................
FD546185       <-- ..................................................
FD554785       <-- ..................................................
FD550212       --> TAATCCAATTAGATCAAAACCCACGAAAAGATCATCATCTTCCTTTCCAG
FD559002       --> TAATCCAATTAGATCAAAACCCACGAAAAGATCATCATCTTCCTTTCCAG
EY913958       --> TAATCCAATTAGATCAAAACCCACGAAAAGATCATCATCTTCCTTTCCAG
FD550192       --> TAATCCAATTAGATCAAAACCCACGAAAAGATCATCATCTTCCTTTCCAG
EW713746       --> ..................................................
EW713747       --> ..................................................

               151    -    201
UN18899        --> GATTCCGCTGTGTTTCTCCGGCTCCTTTACCGTCGTCCTGGAAAGTGAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW718444       <-- ..................................................
FD546166       <-- ..................................................
EW718706       <-- ..................................................
EY910096       <-- ..................................................
FD546185       <-- ..................................................
FD554785       <-- ..................................................
FD550212       --> GATTCCGCTGTGTTTCTCCGGCTCCTTTACCGTCGTCCTGGAAAGTGAGT
FD559002       --> GATTCCGCTGTGTTTCTCCGGCTCCTTTACCGTCGTCCTGGAAAGTGAGT
EY913958       --> GATTCCGCTGTGTTTCTCCGGCTCCTTTACCGTCGTCCTGGAAAGTGAGT
FD550192       --> GATTCCGCTGTGTTTCTCCGGCTCCTTTACCGTCGTCCTGGAAAGTGAGT
EW713746       --> ..................................................
EW713747       --> ..................................................

               201    -    251
UN18899        --> GTTGCTGCGGAGAGCCCTCCGGCGACGACGACGGAGGCGGATGATTGGGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW718444       <-- ..................................................
FD546166       <-- ..................................................
EW718706       <-- ..................................................
EY910096       <-- ..................................................
FD546185       <-- ..................................................
FD554785       <-- ..................................................
FD550212       --> GTTGCTGCGGAGAGCCCTCCGGCGACGACGACGGAGGCGGATGATTGGGG
FD559002       --> GTTGCTGCGGAGAGCCCTCCGGCGACGACGACGGAGGCGGATGATTGGGG
EY913958       --> GTTGCTGCGGAGAGCCCTCCGGCGACGACGACGGAGGCGGATGATTGGGG
FD550192       --> GTTGCTGCGGAGAGCCCTCCGGCGACGACGACGGAGGCGGATGATTGGGG
EW713746       --> ..................................................
EW713747       --> ..................................................

               251    -    301
UN18899        --> GAAGGTGTCCGCGGTGCTATTCGATATGGACGGTGTGCTTTGCAACAGCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW718444       <-- ..................................................
FD546166       <-- ..................................................
EW718706       <-- ..................................................
EY910096       <-- ..................................................
FD546185       <-- ..................................................
FD554785       <-- ..................................................
FD550212       --> GAAGGTGTCCGCGGTGCTATTCGATATGGACGGTGTGCTTTGCAACAGCG
FD559002       --> GAAGGTGTCCGCGGTGCTATTCGATATGGACGGTGTGCTTTGCAACAGCG
EY913958       --> GAAGGTGTCCGCGGTGCTATTCGATATGGACGGTGTGCTTTGCAACAGCG
FD550192       --> GAAGGTGTCCGCGGTGCTATTCGATATGGACGGTGTGCTTTGCAACAGCG
EW713746       --> ..................................................
EW713747       --> ..................................................

               301    -    351
UN18899        --> AGGATCTCTCGAGACGAGCCGCAGTGGATGTCTTCACCGAGATGGGAGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW718444       <-- ..................gCGCAGTGGATGTCTTCACCGAGATGGGAGTT
FD546166       <-- .....................CAGTGGATGTCTTCACCGAGATGGGAGTT
EW718706       <-- ..................................................
EY910096       <-- ..................................................
FD546185       <-- ..................................................
FD554785       <-- ..................................................
FD550212       --> AGGATCTCTCGAGACGAGCCGCAGTGGATGTCTTCACCGAGATGGGAGTT
FD559002       --> AGGATCTCTCGAGACGAGCCGCAGTGGATGTCTTCACCGAGATGGGAGTT
EY913958       --> AGGATCTCTCGAGACGAGCCGCAGTGGATGTCTTCACCGAGATGGGAGTT
FD550192       --> AGGATCTCTCGAGACGAGCCGCAGTGGATGTCTTCACCGAGATGGGAGTT
EW713746       --> ...............ggggCGCAGTGGATGTCTTCACCGAGATGGGAGTT
EW713747       --> ................................TTCACCGAGATGGGAGTT

               351    -    401
UN18899        --> GAAGTCACCGTAGATGACTTCGTCCCTTTCATGGGAACAGGTGAAGCTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW718444       <-- GAAGTCACCGTAGATGACTTCGTCCCTTTCATGGGAACAGGTGAAGCTAA
FD546166       <-- GAAGTCACCGTAGATGACTTCGTCCCTTTCATGGGAACAGGTGAAGCTAA
EW718706       <-- ...........AGATGACTTCGTCCCTTTCATGGGAACAGGTGAAGCTAA
EY910096       <-- ............GATGACTTCGTCCCTTTCATGGGAACAGGTGAAGCTAA
FD546185       <-- .............................CATGGGAACAGGTGAAGCTAA
FD554785       <-- .............................CATGGGAACAGGTGAAGTTAA
FD550212       --> GAAGTCACCGTAGATGACTTCGTCCCTTTCATGGGAACAGGTGAAGCTAA
FD559002       --> GAAGTCACCGTAGATGACTTCGTCCCTTTCATGGGAACAGGTGAAGTTAA
EY913958       --> GAAGTCACCGTAGATGACTTCGTCCCTTTCATGGGAACAGGTGAAGCTAA
FD550192       --> GAAGTCACCGTAGATGACTTCGTCCCTTTCATGGGAACAGGTGAAGCTAA
EW713746       --> GAAGTCACCGTAGATGACTTCGTCCCTTTCATGGGAACAGGTGAAGCTAA
EW713747       --> GAAGTCACCGTAGATGACTTCGTCCCTTTCATGGGAACAGGTGAAGCTAA

               401    -    451
UN18899        --> GTTCTTAGGAGGTGTTGCTTCTGTGAAAGGAGTAAAAGAGTTTAATCCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW718444       <-- GTTCTTAGGAGGTGTTGCTTCTGTGAAAGGAGTAAAAGAGTTTAATCCTG
FD546166       <-- GTTCTTAGGAGGTGTTGCTTCTGTGAAAGGAGTAAAAGAGTTTAATCCTG
EW718706       <-- GTTCTTAGGAGGTGTTGCTTCTGTGAAAGGAGTAAAAGAGTTTAATCCTG
EY910096       <-- GTTCTTAGGAGGTGTTGCTTCTGTGAAAGGAGTAAAAGAGTTTAGTCCTG
FD546185       <-- GTTCTTAGGAGGTGTTGCTTCTGTGAAAGGAGTAAAAGAGTTTAATCCTG
FD554785       <-- GTTCTTAGGAGGTGTTGCTTCTGTGAAAGGAGTAAAAGAGTTTAATCCTG
FD550212       --> GTTCTTAGGAGGTGTTGCTTCTGTGAAAGGAGTAAAAGAGTTTAATCCTG
FD559002       --> GTTCTTAGGAGGTGTTGCTTCTGTGAAAGGAGTAAAAGAGTTTAATCCTG
EY913958       --> GTTCTTAGGAGGTGTTGCTTCTGTGAAAGGAGTAAAAGAGTTTAGTCCTG
FD550192       --> GTTCTTAGGAGGTGTTGCTTCTGTGAAAGGAGTAAAAGAGTTTAATCCTG
EW713746       --> GTTCTTAGGAGGTGTTGCTTCTGTGAAAGGAGTAAAAGAGTTTAATCCTG
EW713747       --> GTTCTTAGGAGGTGTTGCTTCTGTGAAAGGAGTAAAAGAGTTTAATCCTG

               451    -    501
UN18899        --> ATGCAGCTAAAAAGCGCTTCTTTGAGATTTATCTCGATAAGTACGCGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW718444       <-- ATGCAGCTAAAAAGCGCTTCTTTGAGATTTATCTCGATAAGTACGCGAAG
FD546166       <-- ATGCAGCTAAAAAGCGCTTCTTTGAGATTTATCTCGATAAGTACGCGAAG
EW718706       <-- ATGCAGCTAAAAAGCGCTTCTTTGAGATTTATCTCGATAAGTACGCGAAG
EY910096       <-- ATGCAGCTAAAAAGCGCTTCTTTGAGATTTATCTCGATAAGTACGCGAAG
FD546185       <-- ATGCAGCTAAAAAGCGCTTCTTTGAGATTTATCTCGATAAGTACGCGAAG
FD554785       <-- ATGCAGCTAAAAAGCGCTTCTTTGAGATTTATCTCGATAAGTACGCGTAG
FD550212       --> ATGCAGCTAAAAAGCGCTTCTTTGAGATTTATCTCGATAAGTACGCGAAG
FD559002       --> ATGCAGCTAAAAAGCGCTTCTTTGAGATTTATCTCGATAAGTACGCGTAG
EY913958       --> ATGCAGCTAAAAAGCGCTTCTTTGAGATTTATCTCGATAAGTACGCGAAG
FD550192       --> ATGCAGCTAAAAAGCGCTTCTTTGAGATTTATCTCGATAAGTACGCGAAG
EW713746       --> ATGCAGCTAAAAAGCGCTTCTTTGAGATTTATCTCGATAAGTACGCGAAG
EW713747       --> ATGCAGCTAAAAAGCGCTTCTTTGAGATTTATCTCGATAAGTACGCGAAG

               501    -    551
UN18899        --> CCAGAGTCTGGAATTGGATTTCCTGGAGCACTTGAGCTTGTTACTGAGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW718444       <-- CCAGAGTCTGGAATTGGATTTCCTGGAGCACTTGAGCTTGTTACTGAGTG
FD546166       <-- CCAGAGTCTGGAATTGGATTTCCTGGAGCACTTGAGCTTGTTACTGAGTG
EW718706       <-- CCAGAGTCTGGAATTGGATTTCCTGGAGCACTTGAGCTTGTTACTGAGTG
EY910096       <-- CCAGAGTCTGGAATTGGATTTCCTGGAGCACTTGAGCTTGTTACTGAGTG
FD546185       <-- CCAGAGTCTGGAATTGGATTTCCTGGAGCACTTGAGCTTGTTACTGAGTG
FD554785       <-- CCAGAGTCTGGAATTGGATTTCCTGGAGCACTTGAGCTTGTTACTGAGTG
FD550212       --> CCAGAGTCTGGAATTGGATTTCCTGGAGCACTTGAGCTTGTTACTGAGTG
FD559002       --> CCAGAGTCTGGAATTGGATTTCCTGGAGCACTTGAGCTTGTTACTGAGTG
EY913958       --> CCAGAGTCTGGAATTGGATTTCCTGGAGCACTTGAGCTTGTTACTGAGTG
FD550192       --> CCAGAGTCTGGAATTGGATTTCCTGGAGCACTTGAGCTTGTTACTGAGTG
EW713746       --> CCAGAGTCTGGAATTGGATTTCCTGGAGCACTTGAGCTTGTTACTGAGTG
EW713747       --> CCAGAGTCTGGAATTGGATTTCCTGGAGCACTTGAGCTTGTTACTGAGTG

               551    -    601
UN18899        --> TAAGAACAGAGGTCTCAAAGTCGCTGTTGCCTCTAGCGCCGACCGTGTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW718444       <-- TAAGAACAGAGGTTTCAAAGTCGCTGTTGCCTCTAGCGCCGACCGTGTCA
FD546166       <-- TAAGAACAGAGGTCTCAAAGTCGCTGTTGCCTCTAGCGCCGACCGTGTCA
EW718706       <-- TAAGAACAGAGGTCTCAAAGTCGCTGTTGCCTCTAGCGCCGACCGTGTCA
EY910096       <-- TAAGAACAGAGGTCTCAAAGTCGCTGTTGCCTCTAGCGCCGACCGTGTCA
FD546185       <-- TAAGAACAGAGGTCTCAAAGTCGCTGTTGCCTCTAGCGCCGACCGTGTCA
FD554785       <-- TAAGAACAGAGGTCTCAAAGTCGCTGTTGCCTCTAGCGCCGACCGTGTCA
FD550212       --> TAAGAACAGAGGTCTCAAAGTCGCTGTTGCCTCTAGCGCCGACCGTGTCA
FD559002       --> TAAGAACAGAGGTCTCAAAGTCGCTGTTGCCTCTAGCGCCGACCGTGTCA
EY913958       --> TAAGAACAGAGGTCTCAAAGTCGCTGTTGCCTCTAGCGCCGACCGTGTCA
FD550192       --> TAAGAACAGAGGTCTCAAAGTCGCTGTTGCCTCTAGCGCCGACCGTGTCA
EW713746       --> TAAGAACAGAGGTCTCAAAGTCGCTGTTGCCTCTAGCGCCGACCGTGTCA
EW713747       --> TAAGAACAGAGGTCTCAAAGTCGCTGTTGCCTCTAGCGCCGACCGTGTCA

               601    -    651
UN18899        --> AAGTTGATGCAAACCTTGCAGCCGCTGGTTTGTCTTTGTCCATGTTTGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW718444       <-- AAGTTGATGCAAACCTTGCAGCCGCTGGTTTGTCTTTGTCCATGTTTGAT
FD546166       <-- AAGTTGATGCAAACCTTGCAGCCGCTGGTTTGTCTTTGTCCATGTTTGAT
EW718706       <-- AAGTTGATGCAAACCTTGCAGCCGCTGGTTTGTCTTTGTCCATGTTTGAT
EY910096       <-- AAGTTGATGCAAACCTTGCAGCCGCTGGTTTGTCTTTGTCCATGTTTGAT
FD546185       <-- AAGTTGATGCAAACCTTGCAGCCGCTGGTTTGTCTTTGTCCATGTTTGAT
FD554785       <-- AAGTTGATGCAAACCTTGCAGCCGCTGGTTTGTCTTTGTCCATGTTTGAT
FD550212       --> AAGTTGATGCAAACCTTGCAGCCGCTGGTTTGTCTTTGTCCATGTTTGAT
FD559002       --> AAGTTGATGCAAACCTTGCAGCCGCTGGTTTGTCTTTGTCCATGTTTGAT
EY913958       --> AAGTTGATGCAAACCTTGCAGCCGCTGGTTTGTCTTTGTCCATGTTTGAT
FD550192       --> AAGTTGATGCAAACCTTGCAGCCGCTGGTTTGTCTTTGTCCATGTTTGAT
EW713746       --> AAGTTGATGCAAACCTTGCAGCCGCTGGTTTGTCTTTGTCCATGTTTGAT
EW713747       --> AAGTTGATGCAAACCTTGCAGCCGCTGGTTTGTCTTTGTCCATGTTTGAT

               651    -    701
UN18899        --> GCAATTGTATCAGCAGACGCATTTGAGAACTTGAAACCAGCTCCAGATAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW718444       <-- GCAATTGTATCAGCAGACGCATTTGAGAACTTGAAACCAGCTCCAGATAT
FD546166       <-- GCAATTGTATCAGCAGACGCATTTGAGAACTTGAAACCAGCTCCAGATAT
EW718706       <-- GCAATTGTATCAGCAGACGCATTTGAGAACTTGAAACCAGCTCCAGATAT
EY910096       <-- GCAATTGTATCAGCAGACGCATTTGAGAACTTGAAACCAGCTCCAGATAT
FD546185       <-- GCAATTGTATCAGCAGACGCATTTGAGAACTTGAAACCAGCTCCAGATAT
FD554785       <-- GCAATTGTATCAGCAGACGCATTTGAGAACTTGAAACCAGCTCCAGATAT
FD550212       --> GCAATTGTATCAGCAGACGCATTTGAGAACTTGAAACCAGCTC-AGATAT
FD559002       --> GCAATTGTATCAGCAGACGCATTTGAGAACTTGAAACCAGCTCCAGATAT
EY913958       --> GCAATTGTATCAGCAGACGCATTTGAGAACTTGAAACCAGCTCCAGATAT
FD550192       --> GCAATTGTATCAGCAGACGCATTTGAGAACTTGAAACCAGCTCCAGATAT
EW713746       --> GCAATTGTATCAGCAGACGCATTTGAGAACTTGAAACCAGCTCCAGATAT
EW713747       --> GCAATTGTATCAGCAGACGCATTTGAGAACTTGAAACCAGCTCCAGATAT

               701    -    751
UN18899        --> TTTCTTGGCTGCTTCCAAGATCTTGGGTGTGCCCACAAGCGAGTGTATTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW718444       <-- TTTCTTGGCTGCTTCCAAGATCTTGGGTGTGCCCACAAGCGAGTGTATTG
FD546166       <-- TTTCTTGGCTGCTTCCAAGATCTTGGGTGTGCCCACAAGCGAGTGTATTG
EW718706       <-- TTTCTTGGCTGCTTCCAAGATCTTGGGTGTGCCCACAAGCGAGTGTATTG
EY910096       <-- TTTCTTGGCTGCTTCCAAGATCTTGGGTGTGCCCACAAGCGAGTGTATTG
FD546185       <-- TTTCTTGGCTGCTTCCAAGATCTTGGGTGTGCCCACAAGCGAGTGTATTG
FD554785       <-- TTTCTTGGCTGCTTCCAAGATCTTGGGTGTGCCCACAAGCGAGTGTATTG
FD550212       --> T.................................................
FD559002       --> TTTCTTGGCTGCTTCCA-GATCTTGGGTGTGCCCACAAGCGAGTGTATTG
EY913958       --> TTTCTTGGCTGCTTCCAAGATCTTGGGTGTGCCCACAAGCGAGTGTATTG
FD550192       --> TTTCTTGGCTGCTTCCAAGATCTT..........................
EW713746       --> TTTCTTGGCTGCTTCCAAGATCTTGGGTGTGCCCACAAGCGAGTGTATTG
EW713747       --> TTTCTTGGCTGCTTCCAAGATCTTGGGTGTGCCCACAAGCGAGTGTATTG

               751    -    801
UN18899        --> TTATTGAGGATGCACTTGCTGGAGTCCAGGCTGCTCAAGCTGCAAACATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW718444       <-- TTATTGAGGATGCACTTGCTGGAGTCCAGGCTGCTCAAGCTGCAAACATG
FD546166       <-- TTATTGAGGATGCACTTGCTGGAGTCCAGGCTGCTCAAGCTGCAAACATG
EW718706       <-- TTATTGAGGATGCACTTGCTGGAGTCCAGGCTGCTCAAGCTGCAAACATG
EY910096       <-- TTATTGAGGATGCACTTGCTGGAGTCCAGGCTGCTCAAGCTGCAAACATG
FD546185       <-- TTATTGAGGATGCACTTGCTGGAGTCCAGGCTGCTCAAGCTGCAAACATG
FD554785       <-- TTATTGAGGATGCACTTGCTGGAGTCCAGGCTGCTCAAGCTGCAAACATG
FD550212       --> ..................................................
FD559002       --> TTATTGAGGATGCACTTGCTG-AGTC-AGGCTGCTCA-GCTGCAAACATG
EY913958       --> TTATT.............................................
FD550192       --> ..................................................
EW713746       --> TTATTGAGGATGCACTTGCTGGAGTCCAGGCTGCTCAAGCTGCAAACATG
EW713747       --> TTATTGAGGATGCACTTGCTGGAGTCCAGGCTGCTCAAGCTGCAAACATG

               801    -    851
UN18899        --> AGATGCATAGCTGTGAAAACTACTTTATCTGAAGCAGTTCTTAAGGATGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW718444       <-- AGATGCATAGCTGTGAAAACTACTTTATCTGAAGCAGTTTTTAAGGATGC
FD546166       <-- AGATGCATAGCTGTGAAAACTACTTTATCTGAAGCAGTTCTTAAGGATGC
EW718706       <-- AGATGCATAGCTGTGAAAACTACTTTATCTGAAGCAGTTCTTAAGGATGC
EY910096       <-- AGATGCATAGCTGTGAAAACTACTTTATCTGAAGCAGTTCTTAAGGATGC
FD546185       <-- AGATGCATAGCTGTGAAAACTACTTTATCTGAAGCAGTTCTTAAGGATGC
FD554785       <-- AGATGCATAGCTGTGAAAACTACTTTATCTGAAGCAGTTCTTAAGGATGC
FD550212       --> ..................................................
FD559002       --> AGATGCATAGCT......................................
EY913958       --> ..................................................
FD550192       --> ..................................................
EW713746       --> AGATGCATAGCTGTGAAAACTACTTTATCTGAAGCAGTTCTTAAGGATGC
EW713747       --> AGATGCATAGCTGTGAAAACTACTTTATCTGAAGCAGTTCTTAAGGATGC

               851    -    901
UN18899        --> TGGTCCGTCAATGATCCGAGACGATATCGGAAACATATCAATCAATGACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW718444       <-- TGGTCCGTCAATGTTCCGAGACGATTTCGGAAACATATCAATCAATGACA
FD546166       <-- TGGTCCGTCAATGATCCGAGACGATATCGGAAACATATCAATCAATGACA
EW718706       <-- TGGTCCGTCAATGATCCGAGACGATATCGGAAACATATCAATCAATGACA
EY910096       <-- TGGTCCGTCAATGATCCGAGACGATATCGGAAACATATCAATCAATGACA
FD546185       <-- TGGTCCGTCAATGATCCGAGACGATATCGGAAACATATCAATCAATGACA
FD554785       <-- TGGTCCGTCAATGATCCGAGACGATATCGGAAACATATCAATCAATGACA
FD550212       --> ..................................................
FD559002       --> ..................................................
EY913958       --> ..................................................
FD550192       --> ..................................................
EW713746       --> TGGTCCGTCAATGATCCGAGACGATATCGGAAACATATCAATCAATGACA
EW713747       --> TGGTCCGTCAATGATCCGAGACGATATCGGAAACATATCAATCAATGACA

               901    -    951
UN18899        --> TTCTCGCTGGTGGCTCTGATTCTACCAGTATGTAGTCTCCAAGCAATTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW718444       <-- TTCTCGCTGGTGGCTCTGATTCTACCAGTATGTAGTCTC...........  Raphanus sativus var. oleiformis
FD546166       <-- TTCTCACTGGTGGCTCTGATTCTACTAGTATGTAGTCTCCAAGCAATTCG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW718706       <-- TTCTCGCTGGTGGCTCTGATTCTACCAGTATGTAGTCTCCAAACAATTCG  Raphanus sativus var. oleiformis
EY910096       <-- TTCTCACTGGTGGCTCTGATTCTACCAGTATGTAGTCTCCAAGCAATTCG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD546185       <-- TTCTCACTGGTGGCTCTGATTCTACCAGTATGTAGTCTCCAAGCAATTCG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD554785       <-- TTCTCACTGGTGGCTCTGATTCTACCAGTATGTAGTCTCCAAGCAATTCG  Raphanus raphanistrum subsp. landra
FD550212       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD559002       --> ..................................................  Raphanus raphanistrum subsp. landra
EY913958       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD550192       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW713746       --> TTCTCGCTGGTGGCTCTGATTCTACCAGTATGTAGTCTCCAAACAATTCG  Raphanus sativus var. oleiformis
EW713747       --> TTCTCGCTGGTGGCTCTGATTCTACCAGTATGTAGTCTCCAAACAATTCG  Raphanus sativus var. oleiformis

               951    -   1001
UN18899        --> TTGCAAAACACTTCGTTTCTGGTGTATTTATTTCTCCATTGTACTTTTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW718444       <-- ..................................................
FD546166       <-- TTGCAAAACACTTCGTTTCTGGTGTATTTATTTCTCCATTGTACTTTTTC
EW718706       <-- TTGCAAAACACTTCGTTTCTGGTGTATTTATTTCTCCATTGTACTTTTTC
EY910096       <-- TTGCAAAACACTTCGTTTCTGGTGTATTTATTTCTCCATTGTACCTTTTC
FD546185       <-- TTGCAAAACACTTCGTTTCTGGTGTATTTATTTCTCCATTGTACTTTTTC
FD554785       <-- TTGCAAAACACTTCGTTTCTGGTGTATTTATTTCTCCATTGTACTTTTTC
FD550212       --> ..................................................
FD559002       --> ..................................................
EY913958       --> ..................................................
FD550192       --> ..................................................
EW713746       --> TTGCAAAACACTTCGTTTCTGGTGTATTTATTTCTCCATTGTACTTTTTC
EW713747       --> TTGCAAAACACTTCGTTTCTGGTGTATTTATTTCTCCATTGTACTTTTTC

               1001   -   1051
UN18899        --> AAAAATTTCTTGAATAAAGGGCTTTCGTTGTAATGAGATTACGTTTGGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW718444       <-- ..................................................
FD546166       <-- AAAAATTTCTTGAATAAAGGGCTTTCGTTGTAATGAGATTACGTTTGGCA
EW718706       <-- AAAAATTTCTTGAATAAAGGGCTTTCGTTGTAATGAGATTACGTTTGGCA
EY910096       <-- AAAAATTTCTTGAATAAAGGGCTTTCGTTGTAATGAGATTACGTTTGGCA
FD546185       <-- AAAAATTTCTTGAATAAAGGGCTTTCGTTGg...................
FD554785       <-- AAAAATTTCTTGAATAAAGGTCTTTCGTTGTAATGAGATTACGTTTGGCA
FD550212       --> ..................................................
FD559002       --> ..................................................
EY913958       --> ..................................................
FD550192       --> ..................................................
EW713746       --> AAAAATTTCTTGAATAAAGGGCTTTCGTTGTAATGAGATTACGTTTGGCA
EW713747       --> AAAAATTTCTTGAATAAAGGGCTTTCGTTGTAATGAGATTACGTTTGGCA

               1051   -   1101
UN18899        --> TATTGAATCAAATGTTTAGCACTCTA..
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW718444       <-- ............................
FD546166       <-- TATTGAATCAAATGTTTAGCACTCc...
EW718706       <-- TATTGAATCAAATGTTTAGCACTCT...
EY910096       <-- TATTGAATCAAATGTTTAGCACTCTAg.
FD546185       <-- ............................
FD554785       <-- TATTGAATCAAATGTTTAGC........
FD550212       --> ............................
FD559002       --> ............................
EY913958       --> ............................
FD550192       --> ............................
EW713746       --> TATTGAATCAAATGTTTAGC........
EW713747       --> TATTGAATCAAATGTTTAGCACTCTAaa