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Alignment for radish unigene UN18926

               1      -     51
UN18926        --> GGACCCTTGTATAAGCATCTCTCGCCAAACGCAAGAAAATGCGAAAAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728830       <-- ..................................................
FD960725       <-- ..................................................
FD547279       <-- ..................................................
FD582273       <-- ..................................................
FD567578       <-- ..................................................
FD584377       <-- ..................................................
EY945581       <-- ..................................................
FD551379       --> GGACCCTTGTATAAGCATCTCTCGCCAAACGCAAGAAAATGCGAAAAACA
EW724234       --> ..................................................
EY899667       --> ..................................................
EY950224       --> ..................................................
FD563981       --> ..................................................
FD576410       --> ..................................................
FD580624       --> ..................................................

               51     -    101
UN18926        --> AAATCAATCATGGTTCCCAAAGGTGCAAAGAACACGCTTCTAGAGCGACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728830       <-- ..................................................
FD960725       <-- ..................................................
FD547279       <-- ..................................................
FD582273       <-- ..................................................
FD567578       <-- ..................................................
FD584377       <-- ..................................................
EY945581       <-- ..................................................
FD551379       --> AAATCAATCATGGTTCCCAAAGGTGCAAAGAACACGCTTCTAGAGCGACC
EW724234       --> ......ATCATGGTTCCCAAAGGTGCAAAGAACACGCTTCTAGAGCGACC
EY899667       --> ......ATCATGGTTCCCAAAGGTGCAAAGAACACGCTTCTAGAGCGACC
EY950224       --> ......ATCATGGTTCCCAAAGGTGCAAAGAACACGCTTCTAGAGCGACC
FD563981       --> ......ATCATGGTTCCCAAAGGTGCAAAGAACACGCTTCTAGAGCGACC
FD576410       --> ......ATCATGGTTCCCAAAGGTGCAAAGAACACGCTTCTAGAGCGACC
FD580624       --> ......ATCATGGTTCCCAAAGGTGCAAAGAACACGCTTCTAGAGCGACC

               101    -    151
UN18926        --> TTGGTTCATCGTGCTGGCTCTAGCTGGTCTTATAGGCGGGGCAGTGCTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728830       <-- ..................................................
FD960725       <-- ..................................................
FD547279       <-- ..................................................
FD582273       <-- ..................................................
FD567578       <-- ..................................................
FD584377       <-- ..................................................
EY945581       <-- ..................................................
FD551379       --> TTGGTTCATCGTGCTGGCTCTAGCTGGTCTTATAGGCGGCGCAGTGCTCA
EW724234       --> TTGGTTCATCGTGCTGGCTCTAGCTGGTCTTATAGGTGGCGCAGTGCTCA
EY899667       --> TTGGTTCATCGTGCTGGCTCTAGCTGGTCTTATAGGCGGGGCAGTGCTCA
EY950224       --> TTGGTTCATCGTGCTGGCTCTAGCTGGTCTTATAGGCGGGGCAGTGCTCA
FD563981       --> TTGGTTCATCGTGCTGGCTCTAGCTGGTCTTATAGGCGGGGCAGTGCTCA
FD576410       --> TTGGTTCATCGTGCTGGCTCTAGCTGGTCTTATAGGCGGGGCAGTGCTCA
FD580624       --> TTGGTTCATCGTGCTGGC---AGCTGGTCTTATAGGCGGGGCAGTGCTCA

               151    -    201
UN18926        --> TCACCAGTTTCATCCGAGCTACGGACAACACTTTATCACTATGTTCCACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728830       <-- ..................................................
FD960725       <-- ..................................................
FD547279       <-- ..................................................
FD582273       <-- ..................................................
FD567578       <-- ..................................................
FD584377       <-- ..................................................
EY945581       <-- ..................................................
FD551379       --> TCACAAGTTTCATCCGAGCTACGGACAACACTTTATCACTATGTTCCACG
EW724234       --> TCACAAGTTTCATCCGAGCTACGGACAACACTTTATCACTATGTTCCACG
EY899667       --> TCACCAGTTTCATCCGAGCTACGGACAACACTTTATCACTATGTTCCACG
EY950224       --> TCACCAGTTTCATCCGAGCTACGGACAACACTTTATCACTATGTTCCACG
FD563981       --> TCACCAGTTTCATCCGAGCTACGGACAACACTTTATCACTATGTTCCACG
FD576410       --> TCACCAGTTTCATCCGAGCTACGGACAACACTTTATCACTATGTTCCACG
FD580624       --> TCACCAGTTTCATCCGAGCTACGGACAACACTTTATCACTATGTTCCACG

               201    -    251
UN18926        --> GCTGAAACAACTGCAAAATCCATAGCCGAATACACAGCCACACCAATCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728830       <-- ..................................................
FD960725       <-- ..................................................
FD547279       <-- ..................................................
FD582273       <-- ..................................................
FD567578       <-- ..................................................
FD584377       <-- ..................................................
EY945581       <-- ..................................................
FD551379       --> GCTGAAACAACTGCAA--TCCATAGCCGAATACACAGCCACACCAATCCA
EW724234       --> GCTGAAACAGCTGCAAAATCCATAGCCGAATACACAGCCACACCAATCCA
EY899667       --> GCTGAAACAACTGCAAAATCCATAGCCGAATACACAGCCACACCAATCCA
EY950224       --> GCTGAAACAACTGCAAAATCCATAGCCGAATACACAGCCACACCAATCCA
FD563981       --> GCTGAAACAACTGCAAAATCCATAGCCGAATACACAGCCACACCAATCCA
FD576410       --> GCTGAAACAACTGCAAAATCCATAGCCGAATACACAGCCACACCAATCCA
FD580624       --> GCTGAAACAACTGCAAAATCCATAGCCGAATACACAGCCACACCAATCCA

               251    -    301
UN18926        --> GCTCCAATCCATCGTCCATTACGCAACCTCACGCACCGTCCCTCAACAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728830       <-- ..................................................
FD960725       <-- ..................................................
FD547279       <-- ..................................................
FD582273       <-- ..................................................
FD567578       <-- ..................................................
FD584377       <-- ..................................................
EY945581       <-- ..................................................
FD551379       --> GCTCCAATCCATCGTCCATTACGCAACCTCACGCACCGTCCCTCAACAAA
EW724234       --> GCTCCAATCCATCGTCCATTACGCAACCTCACGCACCGTCCCTCAACAAA
EY899667       --> GCTCCAATCCATCGTCCATTACGCAACCTCACGCACCGTCCCTCAACAAA
EY950224       --> GCTCCAATCCATCGTCCATTACGCAACCTCACGCACCGTCCCTCAACAAA
FD563981       --> GCTCCAATCCATCGTCCATTACGCAACCTCACGCACCGTCCCTCAACAAA
FD576410       --> GCTCCAATCCATCGTCCATTACGCAACCTCACGCACCGTCCCTCAACAAA
FD580624       --> GCTCCAATCCATCGTCCATTACGCAACCTCACGCACCGTCCCTCAACAAA

               301    -    351
UN18926        --> CCTTCGCGGAGATCTCTATCTCCTTAGAAGTCCTTAAGGACCGTTTACCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728830       <-- ..........................................GTTTACCT
FD960725       <-- ..................................................
FD547279       <-- ..................................................
FD582273       <-- ..................................................
FD567578       <-- ..................................................
FD584377       <-- ..................................................
EY945581       <-- ..................................................
FD551379       --> CCTTCGCGGAGATCTCTATCTCCTTAGAAGTCCTTAAGGACCGTTTACCT
EW724234       --> CCTTTGCGGAGATCTCTATCTCCTTAGAAGTCCTTAAGGACCGTTTACCT
EY899667       --> CCTTCGCGGAGATCTCTATCTCCTTAGAAGTCCTTAAGGACCGTTTACCT
EY950224       --> CCTTCGCGGAGATCTCTATCTCCTTAGAAGTCCTTAAGGACCGTTTACCT
FD563981       --> CCTTCGCGGAGATCTCTATCTCCTTAGAAGTCCTTAAGGACCGTTCACCT
FD576410       --> CCTTCGCGGAGATCTCTATCTCCTTAGAAGTCCTTAAGGACCGTTTACCT
FD580624       --> CCTTCGCGGAGATCTCTATCTCCTTAGAAGTCCTTAAGGACCGTTTACCT

               351    -    401
UN18926        --> TGCAATTTTCTCGTCTTTGGCCTCGGTCGTGACTCCCTCATGTGGGCCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728830       <-- TGCAATTTTCTTGTCTTTGGCCTCGGTCGTGACTCCCTCATGTGGGCCTC
FD960725       <-- ..................................................
FD547279       <-- ..................................................
FD582273       <-- ..................................................
FD567578       <-- ..................................................
FD584377       <-- ..................................................
EY945581       <-- ..................................................
FD551379       --> TGCAATTTTCTTGTCTTTGGCCTCGGTCGTGACTCCCTCATGTGGGCCTT
EW724234       --> TGCAATTTTCTTGTCTTTGGCCTCGGTCGTGACTCCCTCATGTGGGCCTC
EY899667       --> T-CAATTTTCTCGTCTTTGGCCTCGGTCGTGACTCCCTCATGTGGGCCTC
EY950224       --> TGCAATTTTCTCGTCTTTGGCCTCGGTCGTGACTCCCTCATGTGGGCCTC
FD563981       --> TGCAATTTTCTCGTCTTTGGCCTCGGTCGTGACTCCCTCATGTGGGCCTC
FD576410       --> TGCAATTTTCTCGTCTTTGGCCTCGGTCGTGACTCCCTCATGTGGGCCTC
FD580624       --> TGCAATTTTCTCGTCTTTGGCCTCGGTCGTGACTCCCTCATGTGGGCCTC

               401    -    451
UN18926        --> CCTCAATCCAGGTGGCACCACTGTGTTCATGGAGGAGGATCCTGAGTGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728830       <-- CCTCAATCCAGGTGGCACCACTGTGTTCATGGAGGAGGATCCGGAGTGGA
FD960725       <-- ..................................................
FD547279       <-- ..................................................
FD582273       <-- ..................................................
FD567578       <-- ..................................................
FD584377       <-- ..................................................
EY945581       <-- ..................................................
FD551379       --> CCTCAATCCAGGTGGTACCACTGTGTTCATGGAGGAGGATCCAGAGTGGA
EW724234       --> CCTCAATCCAGGTGGCACCACTGTGTTCATGGAGGAGGATCCGGAGTGGA
EY899667       --> CCTCAATCCAGGTGGCACCACTGTGTTCATGGAGGAGGATCCTGAGTGGA
EY950224       --> CCTCAATCCAGGTGGCACCACTGTGTTCATGGAGGAGGATCCTGAGTGGA
FD563981       --> CCTCAATCCAGGTGGCACCACTGTGTTCATGGAGGAGGATCCTGAGTGGA
FD576410       --> CCTCAATCCAGGTGGCACCACTGTGTTCATGGAGGAGGATCCTGAGTGGA
FD580624       --> CCTCAATCCAGGTGGCACCGCTGTGTTCATGGAGGAGGATCCTGAGTGGA

               451    -    501
UN18926        --> TCGAGGCCGTTCTCAAGGACGCACCGTCCCTAAGAGCCCACCATGTTCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728830       <-- TCGAGGCCGTTCTCAAGGACGCACCGTCCCTAAGAGCCCACCATGTTCAG
FD960725       <-- ...................CGCACCGTCCCTAAGAGCCCACCATGTGCAG
FD547279       <-- .................................GAGCCCACCATGTGCAG
FD582273       <-- .................................GAGCCCACCATGTTCAG
FD567578       <-- ..................................................
FD584377       <-- ..................................................
EY945581       <-- ..................................................
FD551379       --> TCGAGGCCGTTCTCAAGGACGCACCGTCCCTAAGAGCCCACCATGTGCAG
EW724234       --> TCGAGGCCGTTCTCAAGGACGCACCGTCCCTAAGAGCCCACCATGTTCAG
EY899667       --> TCGAGGCCGTT.......................................
EY950224       --> TCGAGGCCGTTCTCAAGGACGCACCGTCCCTAAGAGCCCACCATGTTCAG
FD563981       --> TCGAGGCCGTTCTCAAGGACGCACCGTCCCTAAGAGCCCACCATGTTCAG
FD576410       --> TCGAGGCCGTTCTCAAGGACGCACCGTCCCTAAGAGCCCACCATGTTCAG
FD580624       --> TCGAGGCCGTTCTCAAGGACGCACCGTCCCTAAGAGCCCACCATGTTCAG

               501    -    551
UN18926        --> TATCGGACCCAACTTTCTCAAGCTGACCGTCTTCTCAAAACCTACCGGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728830       <-- TATCGGACCCAACTTTCTCAAGCAGACCGTCTTCTCAAAACCTACCGGTC  Raphanus sativus cv Early Scarlet Globe
FD960725       <-- TATCGGACCCAACTTTCTCAAGCGGACCGTCTTCTCAAAACCTACCGGTC  Raphanus raphanistrum subsp. maritimus
FD547279       <-- TATCGGACCCAACTTTCTCAAGCGGACCGTCTTCTCAAAACCTACCGGTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD582273       <-- TATCGGACCCAACTTTCTCAAGCTGACCATCTTCTCAAAACCTACCGGTC  Raphanus sativus cv Rat-Tail Radish #3870
FD567578       <-- ..................................................  Raphanus sativus var. oleiformis
FD584377       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY945581       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD551379       --> TATCGGACCCAACTTTCTCAAGCGGACCGTCTTCTCAAAACCTACCGGTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW724234       --> TATCGGACCCAACTTTCTCAAGCAGACCGTCTTCTCAAAACCTACCGGTC  Raphanus sativus cv Early Scarlet Globe
EY899667       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY950224       --> TATCGGACCCAACTTTCTCAAGCTGACCATCTTCTCAAAACCTACCGGTC  Raphanus sativus cv Rat-Tail Radish #3870
FD563981       --> TATCGGACCCAACTTTCTCAAGCTGACCATCTTCTCAAAACCTACCGGTC  Raphanus sativus var. oleiformis
FD576410       --> TATCGGACCCAACTTTCTCAAGCTGACCATCTTCTCAAAACCTGCCGGTC  Raphanus sativus cv Rat-Tail Radish #3870
FD580624       --> TATCGGACCCAACTTTCTCAAGCTGACCATCTTCTCAAAACCTACCGGTC  Raphanus sativus cv Rat-Tail Radish #3870

               551    -    601
UN18926        --> TGAACCTAAATGTTTACCAGCCAACGCTTTCCCAATCCGAGACAACGAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728830       <-- TGAACCCAAATGTTTACCAGCCAACGCTTTCCCGATCCGGGACAACGAAA  Raphanus sativus cv Early Scarlet Globe
FD960725       <-- TGAACCCAAATGTTTGCCCGCCAACGCTTTCCCGATCCGGGACAACGAGA  Raphanus raphanistrum subsp. maritimus
FD547279       <-- TGAACCCAAATGTTTGCCCGCCAACGCTTTCCCGATCCGGGACAACGAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD582273       <-- TGAACCTAAATGTTTACCAGCCAACGCTTTCCCAATCCGAGACAACGAAA  Raphanus sativus cv Rat-Tail Radish #3870
FD567578       <-- TGAACCTAAATGTTTACCAGCCAACGCTTTCCCAATCCGAGACAACGAAA  Raphanus sativus var. oleiformis
FD584377       <-- .....CTAAATGTTTACCAGCCAACGCTTTCCCAATCCGAGACAACGAAA  Raphanus sativus cv Rat-Tail Radish #3870
EY945581       <-- ...............................................AAA  Raphanus sativus cv Rat-Tail Radish #3870
FD551379       --> TGAACCCAAATGTTTGCCCGCCAACGCTTTCCCGATCCGGGACAACGAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW724234       --> TGAACCCAAATGTTTACCAGCCAACGCTTTCCCGATCCGGGACAACGAAA  Raphanus sativus cv Early Scarlet Globe
EY899667       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY950224       --> TGAACCTAAATGTTTACCAGCCAACGCTTTCCCAATCCGAGACAACGAAA  Raphanus sativus cv Rat-Tail Radish #3870
FD563981       --> TGAACCTAAATGTTTACCAGCCAACGCTTTCCCAATCCGAGACAACGAAA  Raphanus sativus var. oleiformis
FD576410       --> TGAACCTAAATGTTTACCAGCCAACGCTTTCCCAATCCGAGACAACGAAA  Raphanus sativus cv Rat-Tail Radish #3870
FD580624       --> TGAACCTAAATGTTTACCAGCCAACGCTTTCCCAATCCGAGACAACGAAA  Raphanus sativus cv Rat-Tail Radish #3870

               601    -    651
UN18926        --> AGTGTCCATTGGCGTTGACTTCACTTCCTGATGAGTTCTATGATACCGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728830       <-- AGTGTCCATTGGCGTTGACTTCACTTCCTGATGAGTTCTATGATACCGAG
FD960725       <-- AGTGTCCATTGGCGTTGACTTCACTTCCTGATGAGTTCTATGATACCGAG
FD547279       <-- AGTGTCCATTGGCGTTGACTTCACTTCCTGATGAGTTCTATGATACCGAG
FD582273       <-- AGTGTCCATTGGCGTTGACTTCACTTCCTGATGAGTTCTAT-ATACCGAG
FD567578       <-- AGTGTCCATTGGCGTTGACTTCACTTCCTGATGAGTTCTATGATACCGAG
FD584377       <-- AGTGTCCATTGGCGTTGACTTCACTTCCTGATGAGTTCTATGATACCGAG
EY945581       <-- AGTGTCCATTGGCGTTGACTTCACTTCCTGATGAGTTCTATGATACCGAG
FD551379       --> AGTGTCCATTGGCGTTGACTTCACTTCCTGATGAGTTCTATGATACCGAG
EW724234       --> AGTGTCCATTGGCGTTGACTTCACTTCCTGATGAGTTCTATGATACCGAG
EY899667       --> ..................................................
EY950224       --> AGTGTCCATTGGCGTTGACTTCACTTCCTGATGAGTTCTATGATACCGAG
FD563981       --> AGTGTCCATTGGCGTTGACTTCACTTCCTGATGAGTTCTATGATACCGAG
FD576410       --> AGTGTCCATTGGCGTTGACTTCACTTCCTGATGAGTTCTATGATACCGAG
FD580624       --> AGTGTCCATTGGCGTTGACTTCACTTCCTGATGAGTTCTATGATACCGAG

               651    -    701
UN18926        --> TGGGATCTGATCATGGTGGACGCACCAAAAGGATACTTCGCAACCGCGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728830       <-- TGGGATCTGATCATGGTGGACGCACCAAAAGGATACTTCGCAACTGCGCC
FD960725       <-- TGGGATCTGATCATGGTGGACGCACCAAAAGGATACTTCGCAACCGCGCC
FD547279       <-- TGGGATCTGATCATGGTGGACGCACCAAAAGGATACTTCGCAACCGCGCC
FD582273       <-- TGGGATCTGATCATGGTGGACGCACCAAAAGGATACTTCGCAACCGCGCC
FD567578       <-- TGGGATCTGATCATGGTGGACGCACCAAAAGGATACTTCGCAACCGCGCC
FD584377       <-- TGGGATTTGATCATGGTGGACGCACCAAAAGGATACTTCGCAACCGCGCC
EY945581       <-- TGGGATCTGATCATGGTGGACGCACCAAAAGGATACTTCGCAACCGCGCC
FD551379       --> TGGGATCTGATCATGGTGGACGCACCAAAAGGATACTTCGCAACCG....
EW724234       --> TGGGATCTGATCATGGTGGACGCACCAAAAGGATACTTCGCAACTGCGCC
EY899667       --> ..................................................
EY950224       --> TGGGATCTGATCATGGTGGACGCACC........................
FD563981       --> TGGGATCTGATCATGGTGGACGCACCAAAAGGATACTTCGCAACCGCGCC
FD576410       --> TGGGATCTGATCATGGTGGACGCACCAAAAGGATACTTCGCAACCGCGCC
FD580624       --> TG................................................

               701    -    751
UN18926        --> AGGGAGGATGGCAGCCATATTCTCCTCAGCTGTCATGGCTCGTAACCGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728830       <-- AGGGAGGATGGCAGCCATATTCTCCTCAGCTGTCATGGCTCGTAACCGGA
FD960725       <-- AGGGAGGATGGCAGCCATATTCTCCTCAGCTGTCATGGCTCGTAACCGGA
FD547279       <-- AGGGAGGATGGCAGCCATATTCTCCTCAGCTGTCATGGCTCGTAACCGGA
FD582273       <-- AGGGAGGATGGCAGCCATATTCTCCTCAGCTGTCATGGCTCGTAACCGGA
FD567578       <-- AGGGGGGATGGCAGCCATATTCTCCTCAGCTGTCATGGCTCGTAACCGGA
FD584377       <-- AGGGAGGATGGCAGCCATATTCTCCTCAGCTGTCATGGCTCGTAACCGGA
EY945581       <-- AGGGAGGATGGCACCCATATTCTCCTCAGCTGTCATGGCTCGTAACCGGA
FD551379       --> ..................................................
EW724234       --> AGGGAGGATGGCAGCCATATTCTCCTCAGCTGTCATGGCTCGTAACCGGA
EY899667       --> ..................................................
EY950224       --> ..................................................
FD563981       --> AGGGGGGATGGCAGCCATATTCTCCTCAGCTGTCATGGCTCGTAACCGGA
FD576410       --> AGGGAGGATGGCAGCCATATTCTCCTCAGCTGTCATGGCTCGTACCCGGA
FD580624       --> ..................................................

               751    -    801
UN18926        --> AGGGTGCAGGCACGACTCACGTTTTCCTTCATGACGTTGACCGCAAAGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728830       <-- AGGGTGCAGGCACGACTCACGTTTTCCTTCATGACGTTGACCGCAAAGTG
FD960725       <-- AGGGTGCAGGCACGACGCACGTTTTCCTTCATGACGTTGACCGCAAAGTG
FD547279       <-- AGGGTGCAGGCACGACTCACGTTTTCCTTCATGACGTTGACCGCAAAGTG
FD582273       <-- AGGGTACAGGCACGACTCACGTTTTCCTTCATGACGTTGACCGCAAAGTG
FD567578       <-- AGGGTGCAGGCACGACTCACGTTTTCCTTCATGACGTTGACCGCAAAGTG
FD584377       <-- AGGGTGCAGGCACGACTCACGTTTTCCTTCATGACGTTGACCGCAAAGTG
EY945581       <-- AGGGTGCAGGCACGACTCACGTTTTCCTTCATGACGTTGACCGCAAAGTG
FD551379       --> ..................................................
EW724234       --> AGGGTGCAG-CACGACTCACGTTTTCCTTCATGACGTTGACCGCAAAGTG
EY899667       --> ..................................................
EY950224       --> ..................................................
FD563981       --> AGGt..............................................
FD576410       --> AGG-TGCAG-CACGACTCACGTTT-CCTTCATGACGT-GACCGCA.....
FD580624       --> ..................................................

               801    -    851
UN18926        --> GAGAAAGCTTACGCCAACGAGTTCCTATGCGAGAAGTACAGAGTCAAATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728830       <-- GAGAAAGCTTACGCCAACGAGTGCCTATGCGAGAAGTACAGAGTCAAATC
FD960725       <-- GAGAAAGCTTACGCCAACGAGTTCCTATGCGAGAAGTACAGAGTCAAATC
FD547279       <-- GAGAAAGCTTACGCCAACGAGTTCCTATGCGAGAAGTACAGAGTCAAATC
FD582273       <-- GAGAAAGCTTACGCCAACGAGTTCCTATGCGAGAAGTACAGAGTCAAATC
FD567578       <-- GAGAAAGCTTACGCCAACGAGTTCCTATGCGAGAAGTACAGAGTCAAATC
FD584377       <-- GAGAAAGCTTACGCCAACGAGTTCCTATGCGAGAAGTACAGAGTCAAATT
EY945581       <-- GAGAAAGCTTAC-CCAACGAGTTCCTATGCGAGAAGTACAGAGTCAAATC
FD551379       --> ..................................................
EW724234       --> GAGAAAGCTTACGCCAACGAGTGCCTATGCGAGAAGTACAGAGTC.....
EY899667       --> ..................................................
EY950224       --> ..................................................
FD563981       --> ..................................................
FD576410       --> ..................................................
FD580624       --> ..................................................

               851    -    901
UN18926        --> TGCTGGTAGGCTCTGGCACTTCGAAATACCCAACGCTGCTAACATGAGCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728830       <-- TGCTGGTAGGCTCTGGCACTTCGAAATACCCAACGCTGCTAACATGAGCG
FD960725       <-- TGCTGGTAGGCTCTGGCACTTCGAAATGCCCAACGCTGCTAACATGAGCG
FD547279       <-- TGCTGGTAGGCTCTGGCACTTCGAAATACCCAACGCTGCTAACATGAGCG
FD582273       <-- TGCTGGTAGGCTCTGGCACTTCGAAATACCCAACGCTGCTAACATGAGCG
FD567578       <-- TGCTGGTAGGCTCTGGCACTTCGAAATACCCAACGCTGCTAACATGAGCG
FD584377       <-- TGCTGGTAGGCTTTGGCACTTCGAAATACCCAACGCTGCTAACATGAGCG
EY945581       <-- TGCTGGTAGGCTCTGGCACTTCGAAATACCCAACGCTGCTAACATGAGCG
FD551379       --> ..................................................
EW724234       --> ..................................................
EY899667       --> ..................................................
EY950224       --> ..................................................
FD563981       --> ..................................................
FD576410       --> ..................................................
FD580624       --> ..................................................

               901    -    951
UN18926        --> ACCAGCCGGGGGATCGGTTCTGCTAGATTGCTCCGATATGCAGTCAGTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728830       <-- ACCAGCCGGGGGATCGGTTCTGCTAGATTGTTCCGATATGCAGTCAGTTC
FD960725       <-- ACCAGCCGGGGGATCGGTTCTGCTAGATTGCTCCGATATGCAGTCAGTTC
FD547279       <-- ACCAGCCGGGAGATCGGTTCTGCTAGATTGCTCCGATATGCAGTCAGCTC
FD582273       <-- ACCAGCCGGGGGATCGGTTTTGCTAGATTGCTCCGATATGCAGTCAGTTC
FD567578       <-- ACCAGCCGGGGGATCGGTTTTGCTAGATTGCTCCGATATGCAGTCAGTTC
FD584377       <-- ACCAGCCGGGGGATCGGTTTTGCTAGATTGCTCCGATATGCAGTCAGTTC
EY945581       <-- ACCAGCCGGGGGATCGGTTCTGCTAGATTGCTCCGATATGCAGTCAGTTC
FD551379       --> ..................................................
EW724234       --> ..................................................
EY899667       --> ..................................................
EY950224       --> ..................................................
FD563981       --> ..................................................
FD576410       --> ..................................................
FD580624       --> ..................................................

               951    -   1001
UN18926        --> ATGGTTACTTTTTTTTTTACATTAAACACCGCATACAACTATCCAAAGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728830       <-- ATGGTTACTTTTTTTTTTACATTAAACACCGCATACAACTATCCAAAGGC
FD960725       <-- ATGGTTACTTTTTTTTT-ACATTAAACACCGCATACAACTATCCAAAGGC
FD547279       <-- ATGGTTACTTTTTTT--TACATTAAACACCGCATACAACTATCCAAAGGC
FD582273       <-- ATGGTTACTTTTTTTTT-ACATTAAACACCGCATACAACTATCCAAAGGC
FD567578       <-- ATGGTTACTTTTTTTTTTACATTAAACACCGCATACAACTATCCAAAGGC
FD584377       <-- ATGGTTACTTTTTTTTTTACATTAAACACCGCATACAACTATCCAAAGGC
EY945581       <-- ATGGTTACTTTTTTTTTTACATTAAACACCGCATACAACTATCCAAAGGC
FD551379       --> ..................................................
EW724234       --> ..................................................
EY899667       --> ..................................................
EY950224       --> ..................................................
FD563981       --> ..................................................
FD576410       --> ..................................................
FD580624       --> ..................................................

               1001   -   1051
UN18926        --> TTCTCATTAAAATAAAATCATGTATCCAAAGGCTTCTCAGCGCATACAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728830       <-- TTCTCATTAAAATAAAATCATGTATCCAAAGGCTTTTCAGCGCATACAAC
FD960725       <-- TTCTCATTAAAATAAAATCATGTATCCAAAGGCTTCTCAGCGCATACAAC
FD547279       <-- TTCTCATTAAAATAAAATCATGTATCCAAAGGCTTCTCAGCGCATACAAC
FD582273       <-- TTCTCATTAAAATAAAATCATGTATCCAAAGGCTTCTCAGCGCATACAAC
FD567578       <-- TTCTCATTAAAATAAAATCATGTATCCAAAGGCTTCTCAGCGCATACAAC
FD584377       <-- TTCTCATTAAAATAAAATCATGTATCCAAAGGCTTCTCAGCGCATACAAC
EY945581       <-- TTCTCATTAAAATAAAATCATGTATCCAAAGGCTTCTCAGCGCATACAAC
FD551379       --> ..................................................
EW724234       --> ..................................................
EY899667       --> ..................................................
EY950224       --> ..................................................
FD563981       --> ..................................................
FD576410       --> ..................................................
FD580624       --> ..................................................

               1051   -   1101
UN18926        --> TATTGCTATTACTCTTTGTTTTTGTATGGTGTGCTGTAGAAAATTATTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728830       <-- TATTGCTATTACTCTTTGTTTTTGTATGGTGTGCTGT.............
FD960725       <-- TATTGCTATTACTCTTTGTTTTTGTATGGTGTGCTGTAGAAAATTATTGA
FD547279       <-- TATTGCTATTACTCTTTGTTTTTGTACGGTGTGCTGCAGAAAATTATTGA
FD582273       <-- TATTGCTATTACTCTTTGTTTTTGTATGGTGTGCTGTAGAAAATTATTGA
FD567578       <-- TATTGCTATTACTCTTTGTTTTTGT.........................
FD584377       <-- TATTGCTATTACTCTTTGTTTTTGTATGGTGTGCTGTAGAAAATTATTGA
EY945581       <-- TATTGCTGTTACTCTTTGTTTTTGTATGGTGTGCTGTAGAAAATTATTGA
FD551379       --> ..................................................
EW724234       --> ..................................................
EY899667       --> ..................................................
EY950224       --> ..................................................
FD563981       --> ..................................................
FD576410       --> ..................................................
FD580624       --> ..................................................

               1101   -   1151
UN18926        --> ATGAAAGATCTAGGTCTTTTTGACTTGAAGTGCAAGGCTAGCTAGGCCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728830       <-- ..................................................
FD960725       <-- ATGAAAGATCTAGcaagttat.............................
FD547279       <-- ATGAAAGATCTAGcaagttat.............................
FD582273       <-- ATGAAAGATCTAGGTCTTTTTGACTTGAAGTGCAAGGCTAGCTAGGCCTG
FD567578       <-- ..................................................
FD584377       <-- ATGAAAGATCTAGGTCTTTTTG............................
EY945581       <-- ATGAAAGATCTAGGTCTT................................
FD551379       --> ..................................................
EW724234       --> ..................................................
EY899667       --> ..................................................
EY950224       --> ..................................................
FD563981       --> ..................................................
FD576410       --> ..................................................
FD580624       --> ..................................................

               1151   -   1201
UN18926        --> GACATCAATGTTCGGTCTGGTTTCAACTTTGCAAGTTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728830       <-- .......................................
FD960725       <-- .......................................
FD547279       <-- .......................................
FD582273       <-- GACATCAATGTTCGGTCTGGTTTCAACTTTGCAAGTTAT
FD567578       <-- .......................................
FD584377       <-- .......................................
EY945581       <-- .......................................
FD551379       --> .......................................
EW724234       --> .......................................
EY899667       --> .......................................
EY950224       --> .......................................
FD563981       --> .......................................
FD576410       --> .......................................
FD580624       --> .......................................