Library    |     Search    |     Batch query    |     SNP    |     SSR  

Alignment for radish unigene UN18944

               1      -     51
UN18944        --> TTTTTGTACCCCTCGCATTAGAAAAGTGAGTGTGGCGGGACCAAGTGTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD564253       <-- TTTTTGTACCCCTCGCATTAGAAAAGTGAGTGTGGCGGGACCAAGTGTGT
FD940294       <-- ..................................................
EY927712       <-- ..................................................
FY454345       --> ..................................................
FY453112       --> ..................................................
EY931856       --> ..................................................
FY442531       --> ..................................................
FY446901       --> ..................................................
FD941674       --> ..................................................
EY937582       --> ..................................................

               51     -    101
UN18944        --> CTTCTTATAAGTTTAGATTAGGAACCAGATCGTGAAAAAGGTTTTGACTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD564253       <-- CTTCTTATAAGTTTAGATTAGGAACCAGATCGTGAAAAAGGTTTTGACTA
FD940294       <-- ..................................................
EY927712       <-- ..................................................
FY454345       --> ..................................................
FY453112       --> ..................................................
EY931856       --> ..................................................
FY442531       --> ..................................................
FY446901       --> ..................................................
FD941674       --> ..................................................
EY937582       --> ..................................................

               101    -    151
UN18944        --> TATGAAAACATAAGTTGATGCAATTAGACCGTCTCTAATAATTTTCTCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD564253       <-- TATGAAAACATAAGTTGATGCAATTAGACCGTCTCTAATAATTTTCTCAT
FD940294       <-- ..................................................
EY927712       <-- ..................................................
FY454345       --> ..................................................
FY453112       --> ..................................................
EY931856       --> ..................................................
FY442531       --> ..................................................
FY446901       --> ..................................................
FD941674       --> ..................................................
EY937582       --> ..................................................

               151    -    201
UN18944        --> TTGTATGTTAGTTAATAATATGGTTTCCAGACTCACTTTAGCCCTCTTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD564253       <-- TTGTATGTTAGTTAATAATATGGTTTCCAGACTCACTTTAGCCCTCTTTC
FD940294       <-- ..................................................
EY927712       <-- ..................................................
FY454345       --> ..................................................
FY453112       --> ..................................................
EY931856       --> ..................................................
FY442531       --> ..................................................
FY446901       --> ..................................................
FD941674       --> ..................................................
EY937582       --> ..................................................

               201    -    251
UN18944        --> CCTTGGTGAGAATATGTTTGGTTTATCCTTATGTGATTTTTGCTGTAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD564253       <-- CCTTGGTGAGAATATGTTTGGTTTATCCTTATGTGATTTTTGCTGTAAAG
FD940294       <-- ....................................TTTTTGCTGTAAAG
EY927712       <-- ..................................................
FY454345       --> ..................................................
FY453112       --> ..................................................
EY931856       --> ..................................................
FY442531       --> ..................................................
FY446901       --> ..................................................
FD941674       --> ..................................................
EY937582       --> ..................................................

               251    -    301
UN18944        --> AGAGCTCTGTCCTCTGGTAGAAATTGCATTTCCACATCTTCAGGTTTACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD564253       <-- AGAGCTCTGTCCTCTGGTAGAAATTGCATTTCCACATCTTCAGGTTTACA
FD940294       <-- AGAGCTCTGTCCTCTGGTAGAAATTGCATTTCCACATCTTCAGGTTTACA
EY927712       <-- ..................................................
FY454345       --> ..................................................
FY453112       --> ..................................................
EY931856       --> ..................................................
FY442531       --> ..................................................
FY446901       --> ..................................................
FD941674       --> ..................................................
EY937582       --> ..................................................

               301    -    351
UN18944        --> ATTTAAGGGATACAAAAGAAAGGTCCAAGCTTTGCTTATCAAATAGTCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD564253       <-- ATTTAAGGGATACAAAAGAAAGGTCCAAGCTTTGCTTATCAAATAGTCTT
FD940294       <-- ATTTAAGGGATACAAAAGAAAGGTCCAAGCTTTGCTTATCAAATAGTCTT
EY927712       <-- ..................................................
FY454345       --> ..................................................
FY453112       --> ..................................................
EY931856       --> ..................................................
FY442531       --> ..................................................
FY446901       --> ..................................................
FD941674       --> ..................................................
EY937582       --> ..................................................

               351    -    401
UN18944        --> ATAGGTCAACTCCTCGGAGGAGTCTCCTCCCACTCTGTACTATCTATTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD564253       <-- ATAGGTCAACTCCTCGGAGGAGTCTCCTCCCACTCTGTACTATCTATTGC
FD940294       <-- ATAGGTCAACTCCTCGGAGGAGTCTCCTCCCACTCTGTACTATCTATTGC
EY927712       <-- ..................................................
FY454345       --> ..................................................
FY453112       --> ..................................................
EY931856       --> ..................................................
FY442531       --> ..................................................
FY446901       --> ..................................................
FD941674       --> ..................................................
EY937582       --> ..................................................

               401    -    451
UN18944        --> AAGGCGGCTAGAAAGAGTTTCGATCACCATCCAGTACTGTTTTGTACAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD564253       <-- AAGGCGGCTAGAAAGAGTTTCGATCACCATCCAGTACTGTTTTGTACAAC
FD940294       <-- AAGGCGGCTAGAAAGAGTTTCGATCACCATCCAGTACTGTTTTGTACAAC
EY927712       <-- ..................................................
FY454345       --> ..................................................
FY453112       --> ..................................................
EY931856       --> ..................................................
FY442531       --> ..................................................
FY446901       --> ..................................................
FD941674       --> ..................................................
EY937582       --> ..................................................

               451    -    501
UN18944        --> CAAAATTTCTTATCTTATATGAGTTGCAACATTTAACTAAAAGCCAACTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD564253       <-- CAAAATTTCTTATCTTATATGAGTTGCAACATTTAACTAAAAGCCAACTG
FD940294       <-- CAAAATTTCTTATCTTATATGAGTTGCAACATTTAACTAAAAGCCAACTG
EY927712       <-- ..................................................
FY454345       --> ..................................................
FY453112       --> ..................................................
EY931856       --> ..................................................
FY442531       --> ..................................................
FY446901       --> ..................................................
FD941674       --> ..................................................
EY937582       --> ..................................................

               501    -    551
UN18944        --> ATGGATGAAGTGTGTAGTGTGAAGTTAAACTCTTGTGATGGGACACGCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD564253       <-- ATGGATGAAGTGTGTAGTGTGAAGTTAAACTCTTGTGATGGGACACGCAG
FD940294       <-- ATGGATGAAGTGTGTAGTGTGAAGTTAAACTCTTGTGATGGGACACGCAG
EY927712       <-- ..................................................
FY454345       --> ..................................................
FY453112       --> ..................................................
EY931856       --> ..................................................
FY442531       --> ..................................................
FY446901       --> ..................................................
FD941674       --> ..................................................
EY937582       --> ..................................................

               551    -    601
UN18944        --> ACCAAACACAAAGCGCCAAAAAGGAAGGAAAAGTCTTTGTCTCGATCTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD564253       <-- ACCAAACACAAAGCGCCAAAAAGGAAGGAAAAGTCTTTGTCTCGATCTCT
FD940294       <-- ACCAAACACAAAGCGCCAAAAAGGAAGGAAAAGTCTTTGTCTCGATCTCT
EY927712       <-- ..................................................
FY454345       --> ..................................................
FY453112       --> ..................................................
EY931856       --> ..................................................
FY442531       --> ..................................................
FY446901       --> ..................................................
FD941674       --> ..................................................
EY937582       --> ..................................................

               601    -    651
UN18944        --> TACTATATTATATGAAAGCTTGCACGCGATGACTTGAACGAGGTCTTTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD564253       <-- TACTATATTATATGAAAGCTTGCACGCGATGACTTGAACGAGGTCTTTCT
FD940294       <-- TACTATATTATATGAAAGCTTGCACGCGATGACTTGAACGAGGTCTTTCT
EY927712       <-- ..................................................
FY454345       --> ..................................................
FY453112       --> ..................................................
EY931856       --> ..................................................
FY442531       --> ..................................................
FY446901       --> ..................................................
FD941674       --> ..................................................
EY937582       --> ..................................................

               651    -    701
UN18944        --> TTCATCAAGCCTAAACCAATCACTTTCTAGATTCCTTTAGCTGTGTCCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD564253       <-- TTCATCAAGCCTAAACCAATCACTTTCTAGATTCCTTTAGCTGTGCCCTA
FD940294       <-- TTCATCAAGCCTAAACCAATCACTTTCTAGATTCCTTTAGCTGTGCCCTA
EY927712       <-- ..................................................
FY454345       --> ...................TCACTTTCTAGATTCCTTTAGCTGTGTCCTA
FY453112       --> .....................ACTTTCTAGATTCCTTTAGCTGTGTCCTA
EY931856       --> ....................................ggagtTGTGTCCTA
FY442531       --> ..................................................
FY446901       --> ..................................................
FD941674       --> ..................................................
EY937582       --> ..................................................

               701    -    751
UN18944        --> AAAAAGATTTCACTTTTCTCATCAACATATCCAATATCCAGAAACAAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD564253       <-- AAAAAGATTTCACTTTTCTCACCAACAAATCCAATATCCA..........  Raphanus sativus var. oleiformis
FD940294       <-- AAAAAGATTTCACTTTTCTCACCAACAAATCCAATATCCA..........  Raphanus sativus var. oleiformis
EY927712       <-- ..................................................  Raphanus sativus var. oleiformis
FY454345       --> AAAAAGATTTCACTTTTCTCATCAACATATCCAATATCCAGAAACAAAAG  Raphanus sativus cv GSK3-1
FY453112       --> AAAAAGATTTCACTTTTCTCATCAACATATCCAATATCCAGAAACAAAAG  Raphanus sativus cv GSK3-1
EY931856       --> AAAAAGATTTCACTTTTCTCATCAACAAATCCAATATCCAGAAACAAAAG  Raphanus sativus var. oleiformis
FY442531       --> .........TCACTTTTCTCATCAACATATCCAATATCCAGAAACAAAAG  Raphanus sativus cv GSK3-1
FY446901       --> ..................................................  Raphanus sativus cv GSK3-1
FD941674       --> ..................................................  Raphanus sativus var. oleiformis
EY937582       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               751    -    801
UN18944        --> AA---TAATGGATTCTTTGTCATTTTCTTCGATGAAATCTATGTTGATCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD564253       <-- ..................................................
FD940294       <-- ..................................................
EY927712       <-- ..................................................
FY454345       --> AA---TAATGGATTCTTTGTCATTTTCTTCGATGAAATCTATGTTGATCG
FY453112       --> AA---TAATGGATTCTTTGTCATTTTCTTCGATGAAATCTATGTTGATCG
EY931856       --> AAAAAAAATGGAGTCTTTGTCATTTTCTTCGATGAAATCTATGTTGATCG
FY442531       --> AA---TAATGGATTCTTTGTCATTTTCTTCGATGAAATCTATGTTGATCG
FY446901       --> ..................................................
FD941674       --> ..................................................
EY937582       --> ..................................................

               801    -    851
UN18944        --> AAGCTCGAGGCTCGCTAAACTCGCGTTTGTCGGAGTTTGAGCCTCTGGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD564253       <-- ..................................................
FD940294       <-- ..................................................
EY927712       <-- ..................................................
FY454345       --> AAGCTCGAGGCTCGCTAAACTCGCGTTTGTCGGAGTTTGAGCCTCTGGCT
FY453112       --> AAGCTCGAGGCTCGCTAAACTCGCGTTTGTCGGAGTTTGAGCCTCTGGCT
EY931856       --> AAGCTCGAGGGTCGCTAAACTCGCGTTTGTCGGAGTTTGAGCCTCTGGCT
FY442531       --> AAGCTCGAGGCTCGCTAAACTCGCGTTTGTCGGAGTTTGAGCCTCTGGCT
FY446901       --> ..................................................
FD941674       --> ..................................................
EY937582       --> ..................................................

               851    -    901
UN18944        --> CTTGTCTTTACCCCGCTCATCACACTTTTTCTAGCGCAGGTCATCGGATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD564253       <-- ..................................................
FD940294       <-- ..................................................
EY927712       <-- ..................................................
FY454345       --> CTTGTCTTTACCCCGCTCATCACACTTTTTCTAGCGCAGGTCATCGGATC
FY453112       --> CTTGTCTTTACCCCGCTCATCACACTTTTTCTAGCGCAGGTCATCGGATC
EY931856       --> CTTGTGTTTACCCCGCTCATCACACTTTTTCTAGCGCAGGTCATCGGATC
FY442531       --> CTTGTCTTTACCCCGCTCATCACACTTTTTCTAGCGCAGGTCATCGGATC
FY446901       --> ..................................................
FD941674       --> ..................................................
EY937582       --> ..................................................

               901    -    951
UN18944        --> TGTGTTGGGCGTTGTCCACGAGAAAGGCCTCAAAGCATGTCTTGTGGGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD564253       <-- ..................................................
FD940294       <-- ..................................................
EY927712       <-- ..................................................
FY454345       --> TGTGTTGGGCGTTGTCCACGAGAAAGGCCTCAAAGCATGTCTTGTGGGGT
FY453112       --> TGTGTTGGGCGTTGTCCACGAGAAAGGCCTCAAAGCATGTCTTGTGGGGT
EY931856       --> TGTGTTGGGCGTTGTCCACGAGAAAGGCCTGAAAGCATGTCTTGTGGGGT
FY442531       --> TGTGTTGGGCGTTGTCCACGAGAAAGGCCTCAAAGCATGTCTTGTGGGGT
FY446901       --> .....TGGGCGTTGTCCACGAGAAAGGCCTCAAAGCATGTCTTGTGGGGT
FD941674       --> ..................................................
EY937582       --> ..................................................

               951    -   1001
UN18944        --> TTATCATGGGATTCTTCAAAAAGATCCCTGGAGTCCAAAGCTACATAGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD564253       <-- ..................................................
FD940294       <-- ..................................................
EY927712       <-- ..................................................
FY454345       --> TTATCATGGGATTCTTCAAAAAGATCCCTGGAGTCCAAAGCTACATAGAT
FY453112       --> TTATCATGGGATTCTTCAAAAAGATCCCTGGAGTCCAAAGCTACATAGAT
EY931856       --> TTATCATGGGATTCTTCAAAATGATTCCTGGAGTCCAAAGCTACATAGAT
FY442531       --> TTATCATGGGATTCTTCAAAAAGATCCCTGGAGTCCAAAGCTACATAGAT
FY446901       --> TTATCATGGGATTCTTCAAAAAGATCCCTGGAGTCCAAAGCTACATAGAT
FD941674       --> ..................................................
EY937582       --> ..................................................

               1001   -   1051
UN18944        --> GCAGAGAAACAAAAGGTTGTTGATCAGTTACAATCTGGTGGAAACTCTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD564253       <-- ..................................................
FD940294       <-- ..................................................
EY927712       <-- ..................................................
FY454345       --> GCAGAGAAACAAAAGGTTGTTGATCAGTTACAATCTGGTGGAAACTCTAA
FY453112       --> GCAGAGAAACAAAAGGTTGTTGATCAGTTACAATCTGGTGGAAACTCTAA
EY931856       --> GCAGAGAAACAAAAGGTTGTTGATCAGTTACAATCTGGTGGAAGCTCTAA
FY442531       --> GCAGAGAAACAAAAGGTTGTTGATCAGTTACAATCTGGTGGAAACTCTAA
FY446901       --> GCAGAGAAACAAAAGGTTGTTGATCAGTTACAATCTGGTGGAAACTCTAA
FD941674       --> ..................................................
EY937582       --> ..................................................

               1051   -   1101
UN18944        --> GAAAAATAACTGGGCTAAAGAACTGCCAGTAAGAGGTCTAGGTGTCCAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD564253       <-- ..................................................
FD940294       <-- ..................................................
EY927712       <-- ..................................................
FY454345       --> GAAAAATAACTGGGCTAAAGAACTGCCAGTAAGAGGTCTAGGTGTCCAAG
FY453112       --> GAAAAATAACTGGGCTAAAGAACTGCCAGTAAGAGGTCTAGGTGTCCAAG
EY931856       --> GAAAATTAACTGGGCTAAAGAACTGCCAGTAAGAGGTCTAGGTGTCCAAG
FY442531       --> GAAAAATAACTGGGCTAAAGAACTGCCAGTAAGAGGTCTAGGTGTCCAAG
FY446901       --> GAAAAATAACTGGGCTAAAGAACTGCCAGTAAGAGGTCTAGGTGTCCAAG
FD941674       --> ..................................................
EY937582       --> ..................................................

               1101   -   1151
UN18944        --> TTCTAGAGAAAATGGAGTCTGAGAAGAGGAATGATCCTACTTGGCAAGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD564253       <-- ..................................................
FD940294       <-- ..................................................
EY927712       <-- ..................................................
FY454345       --> TTCTAGAGAAAATGGAGTCTGAGAAGAGGAATGATCCTACTTGGCAAGGC
FY453112       --> TTCTAGAGAAAATGGAGTCTGAGAAGAGGAATGATCCTACTTGGCAAGGC
EY931856       --> TTCTAGAGAAAATGGAGTCTGAGAAGAGGAATGATCCTACTTGGCAAGGC
FY442531       --> TTCTAGAGAAAATGGAGTCTGAGAAGAGGAATGATCCTACTTGGCAAGGC
FY446901       --> TTCTAGAGAAAATGGAGTCTGAGAAGAGGAATGATCCTACTTGGCAAGGC
FD941674       --> ..................................................
EY937582       --> ..................................................

               1151   -   1201
UN18944        --> AAATGCTCCGGCACTGTATACATAGGTGGAAGCGAGTCTGAAGGACATTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD564253       <-- ..................................................
FD940294       <-- ..................................................
EY927712       <-- ..................................................
FY454345       --> AAATGCTCCGGCACTGTATACATAGGTGGAAGCGAGTCTGAAGGACATTT
FY453112       --> AAATGCTCCGGCACTGTATACATAGGTGGAAGCGAGTCTGAAGGACATTT
EY931856       --> AAATGCTCCGGCACTGTATACATAGGTGGAAGCGAGTCTGAAGGACATTT
FY442531       --> AAATGCTCCGGCACTGTATACATAGGTGGAAGCGAGTCTGAAGGACATTT
FY446901       --> AAATGCTCCGGCACTGTATACATAGGTGGAAGCGAGTCTGAAGGACATTT
FD941674       --> ..................................................
EY937582       --> ..................................................

               1201   -   1251
UN18944        --> TACATTGATAAACCAAGCGTGTTCAATGTTTGCGCATACCAATCCGTTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD564253       <-- ..................................................
FD940294       <-- ..................................................
EY927712       <-- ..................................................
FY454345       --> TACATTGATAAACCAAGCGTGTTCAATGTTTGCGCATACCAATCCGTTGC
FY453112       --> TACATTGATAAACCAAGCGTGTTCAATGTTTGCGCATACCAATCCGTTGC
EY931856       --> TACATTGATAAACCAAGCGTGTTCAATGTTTGCGCATACCAATCCGTTGC
FY442531       --> TACATTGATAAACCAAGCGTGTTCAATGTTTGCGCATACCAATCCGTTGC
FY446901       --> TACATTGATAAACCAAGCGTGTTCAATGTTTGCGCATACCAATCCGTTGC
FD941674       --> ..................................................
EY937582       --> ..................................................

               1251   -   1301
UN18944        --> ATATAGACGTGTTCCAGAGCGTGGTGCGGTTTGAGTCAGAAGTAGTGGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD564253       <-- ..................................................
FD940294       <-- ..................................................
EY927712       <-- ..................................................
FY454345       --> ATATAGACGTGTTCCAGAGCGTGGTGCGGTTTGAGTCAGAAGTAGTGGCA
FY453112       --> ATATAGACGTGTTCCAGAGCGTGGTGCGGTTTGAGTCAGAAGTAGTGGCA
EY931856       --> ATATAGACGTGTTCCAGAGCGTGGTGCGGTTTGAGTCAGAAGTAGTCGCA
FY442531       --> ATATAGACGTGTTCCAGAGCGTGGTGCGGTTTGAGTCAGAAGTAGTGGCA
FY446901       --> ATATAGACGTGTTCCAGAGCGTGGTGCGGTTTGAGTCAGAAGTAGTGGCA
FD941674       --> ....gGACGTGTTCCAGAGTGTGGTGCGGTTTGAGTCAGAAGTAGTGGCA
EY937582       --> ..................................................

               1301   -   1351
UN18944        --> ATGACTGCTGCTTTACTCGGGAGCAAAGAAGCGGTTTCAGGAGAAGAGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD564253       <-- ..................................................
FD940294       <-- ..................................................
EY927712       <-- ..................................................
FY454345       --> ATGACTGCTGCTTTACTCGGGAGCAAAGAAGCGGTTTCAGGAGAAGAGAT
FY453112       --> ATGACTGCTGCTTTACTCGGGAGCAAAGAAGCGGTTTCAGGAGAAGAGAT
EY931856       --> ATGACTGCTGCTTTACTCGGG.............................
FY442531       --> ATGACTGCTGCTTTACTCGGGAGCAAAGAAGCGGTTTCAGGAGAAGAGAT
FY446901       --> ATGACTGCTGCTTTACTCGGGAGCAAAGAAGCGGTTTCAGGAGAAGAGAT
FD941674       --> ATGACTGCTGCTTTACTCGGGAGCAAAGAAGCGGTTTCAGGAGAAGAGAT
EY937582       --> ..................................................

               1351   -   1401
UN18944        --> ATGCGGAAACATGACGTCTGGAGGTACTGAGAGTATTGTGTTGGCAGTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD564253       <-- ..................................................
FD940294       <-- ..................................................
EY927712       <-- ..................................................
FY454345       --> ATGCGGAAACATGACGTCTGGAGGTACTGAGAGTATTGTGTTGGCAGTGA
FY453112       --> ATGCGGAAACATGACGTCTGGAGGTACTGAGAGTATTGTGTTGGCAGTGA
EY931856       --> ..................................................
FY442531       --> ATGCGGAAACATGACGTCTGGAGGTACTGAGAGTATTGTGTTGGCAGTGA
FY446901       --> ATGCGGAAACATGACGTCTGGAGGTACTGAGAGTATTGTGTTGGCAGTGA
FD941674       --> ATGCGGAAACATGACGTCTGGAGGTACTGAGAGTATTGTGTTGGCAGTGA
EY937582       --> ..................................................

               1401   -   1451
UN18944        --> AGTCGTCTCGAGACTATATGAAGTACAAGAAGGGAATCAAACGGCCAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD564253       <-- ..................................................
FD940294       <-- ..................................................
EY927712       <-- ..................................................
FY454345       --> AGTCGTCTCGAGACTATATGAAGTACAAGAAGGGAATCAAACGGCCAGAA
FY453112       --> AGTCGTCTCGAGACTATATGAAGTACAAGAAGGGAATCAAACGGCCAGAA
EY931856       --> ..................................................
FY442531       --> AGTCGT............................................
FY446901       --> AGTCGTCTCGAGACTATATGAAGTACAAGAAGGGAATCAAACGGCCAGAA
FD941674       --> AGTCGTCTCGAGACTATATGAAGTACAAGAAGGGAATCAAACGGCCAGAA
EY937582       --> ..................................................

               1451   -   1501
UN18944        --> ATGATTATACCTGAATCGGGTCACTCGGCTTATGATAAAGCGGCTCAGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD564253       <-- ..................................................
FD940294       <-- ..................................................
EY927712       <-- ..................................................
FY454345       --> ATGATTATACCTGAATCGGGTCACTCGGCTTATGATAAAGCGGCTCAGTA
FY453112       --> ATGATTATACCTGAATCGGGTCACTCGGCTTATGATAAAGCGGCTCAGTA
EY931856       --> ..................................................
FY442531       --> ..................................................
FY446901       --> ATGATTATACCTGAATCGGGTCACTCGGCTTATGATAAAGCGGCTCAGTA
FD941674       --> ATGATTATACCTGAATCGGGTCATTCGGCTTATGATAAGGCGGCTCAGTA
EY937582       --> ..................................................

               1501   -   1551
UN18944        --> TTTTAACATCAAGTTGTGGCGAGTTCCAGTAGGCAAAGACTTCCGAGCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD564253       <-- ..................................................
FD940294       <-- ..................................................
EY927712       <-- ..................................................
FY454345       --> TTTTAACATCAAGTTGTGGCGAGTTCCA......................
FY453112       --> TTTTAACATCAAGTTGTGGCGAGTTCCAG.....................
EY931856       --> ..................................................
FY442531       --> ..................................................
FY446901       --> TTTTAACATCAAGTTGTGGCGAGTTCCAGTAGGCAAAGACTTCCGAGCTG
FD941674       --> TTTTAACATCAAGTTGTGGCGAGTTCCAGTAGGCAAAGACTTCCGAGCTG
EY937582       --> ..................................................

               1551   -   1601
UN18944        --> ATGTGAAGGCTATGAGGAGGCATATTAACAGAAACACCATCATGATTGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD564253       <-- ..................................................
FD940294       <-- ..................................................
EY927712       <-- ..................................................
FY454345       --> ..................................................
FY453112       --> ..................................................
EY931856       --> ..................................................
FY442531       --> ..................................................
FY446901       --> ATGTGAAGGCTATGAGGAGGCATATTAACAGAAACACCATCATGATTGTT
FD941674       --> ATGTGAAGGCAATGAGAAGGCATATTAACAGAAACACCATCATGATTGTT
EY937582       --> ..................................................

               1601   -   1651
UN18944        --> GGATCAGCACCAGGATTCCCTCATGGCATCATTGATCCTATTGAGGAGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD564253       <-- ..................................................
FD940294       <-- ..................................................
EY927712       <-- ..................................................
FY454345       --> ..................................................
FY453112       --> ..................................................
EY931856       --> ..................................................
FY442531       --> ..................................................
FY446901       --> GGATCAGCACCAGGATTCCCTCATGGCATCATTGATCCTATTGAGGAGCT
FD941674       --> GGATCAGCACCAGGATTCCCTCATGGCATCATTGATCCTATTGAGGAGCT
EY937582       --> ......GCACCAGGATTCCCTCATGGCATCATTGATCCTATTGAGGAGCT

               1651   -   1701
UN18944        --> TGGTCAACTGGCTTTTAGCTATGGAATATGCTTCCATGTTGACCTTTGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD564253       <-- ..................................................
FD940294       <-- ..................................................
EY927712       <-- ..................................................
FY454345       --> ..................................................
FY453112       --> ..................................................
EY931856       --> ..................................................
FY442531       --> ..................................................
FY446901       --> TGGTCAACTGGCTTTTAGCTATGGGATATGCTTCCATGTTGACCTTTGCC
FD941674       --> TGGTCAACTGGCTTTTAGCTATGGAATATGCTTCCATGTTGACCTTTGCC
EY937582       --> TGGTCAACTGGCTCTTAGCTATGGAATATGCTTCCATGTTGACCTTTGCC

               1701   -   1751
UN18944        --> TTGGTGGTTTTGTGTTACCTTTCGCTCGTAAACTTGGGTACGAGATCCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD564253       <-- ..................................................
FD940294       <-- ..................................................
EY927712       <-- ..................................................
FY454345       --> ..................................................
FY453112       --> ..................................................
EY931856       --> ..................................................
FY442531       --> ..................................................
FY446901       --> TT................................................
FD941674       --> TTGGTGGTTTTGTGTTACCTTTCGCTCGTAAACTTGGGTACCAGATCCCA
EY937582       --> TTGGTGGTTTTGTGTTACCTTTCGCTCGTAAACTTGGGTACGAGATCCCA

               1751   -   1801
UN18944        --> GCTTTTGATTTTTCTGTAAAAGGAGTCACTTCAATCTCGGTGGACGTGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD564253       <-- ..................................................
FD940294       <-- ..................................................
EY927712       <-- ..................................................
FY454345       --> ..................................................
FY453112       --> ..................................................
EY931856       --> ..................................................
FY442531       --> ..................................................
FY446901       --> ..................................................
FD941674       --> GCATTTGATTTTTCTGTAAAAGGAGTCACTTCAATCTCGGTGGACGTGCA
EY937582       --> GCTTTTGATTTTTCTATAAAAGGAGTCACTTCAATCTCGGTGGACGTGCA

               1801   -   1851
UN18944        --> TAAATATGGTTTGGCTCCTAAAGGAACTAGTACAGTTCTCTACAGAAATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD564253       <-- ..................................................
FD940294       <-- ..................................................
EY927712       <-- ..................................................
FY454345       --> ..................................................
FY453112       --> ..................................................
EY931856       --> ..................................................
FY442531       --> ..................................................
FY446901       --> ..................................................
FD941674       --> TAAATATGGTTTGGCTCCTAAAGGAACTAGTACAGTTCTCTACAGAAATC
EY937582       --> TAAATATGGTTTGGCTCCTAAAGGAACTAGTACAGTTCTCTACAGAAATC

               1851   -   1901
UN18944        --> ATGAGATTAGAAAGCACCAATTTGTTGCTGTAACTGAATGGTCAGGAGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD564253       <-- ..................................................
FD940294       <-- ..................................................
EY927712       <-- ............AGCACCAATTTGTTGCTGTAACTGAATGGTCAGGAGGA
FY454345       --> ..................................................
FY453112       --> ..................................................
EY931856       --> ..................................................
FY442531       --> ..................................................
FY446901       --> ..................................................
FD941674       --> ATGAGATCAGAAAGCACCAATTTGTTGCTGTAACTGAATGGTCAG-AGGA
EY937582       --> ATGAGATTAGAAAGCACCAATTTGTTGCTGTAACTGAATGGTCAGGAGGA

               1901   -   1951
UN18944        --> CTATACGTGTCTCCAACTATAGCTGGGAGTAGGCCTGGTTCTTTGGTTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD564253       <-- ..................................................
FD940294       <-- ..................................................
EY927712       <-- CTATACGTGTCTCCAACTATAGCTGGGAGTAGGCCTGGTTCTTTGGTTGC
FY454345       --> ..................................................
FY453112       --> ..................................................
EY931856       --> ..................................................
FY442531       --> ..................................................
FY446901       --> ..................................................
FD941674       --> CTATACGTGTCTCCAACTATAGCT..........................
EY937582       --> CTATACGTGTCTCCAACTATAGCTGGGAGTAGGCCTGGTTCTTTGGTTGC

               1951   -   2001
UN18944        --> TGGTGCTTGGGCTGCCATGATGTCTCTCGGCGAAGAAGGCTATCTAGAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD564253       <-- ..................................................
FD940294       <-- ..................................................
EY927712       <-- TGGTGCTTGGGCTGCCATGATGTCTCTCGGCGAAGAAGGCTATCTAGAAA
FY454345       --> ..................................................
FY453112       --> ..................................................
EY931856       --> ..................................................
FY442531       --> ..................................................
FY446901       --> ..................................................
FD941674       --> ..................................................
EY937582       --> TGGTGCTTGGGCTGCAATGATGTCTCTCGGCGAAGAAGGCTATCTAGAAA

               2001   -   2051
UN18944        --> ATACAGGAAAGATAATGGAAGCATCAAAGAGACTAGAGGAAGGTGTAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD564253       <-- ..................................................
FD940294       <-- ..................................................
EY927712       <-- ACACAGGAAAGATAATGGAAGCATCAAAGAGACTAGAGGAAGGAGTAAGA
FY454345       --> ..................................................
FY453112       --> ..................................................
EY931856       --> ..................................................
FY442531       --> ..................................................
FY446901       --> ..................................................
FD941674       --> ..................................................
EY937582       --> ATACAGGAAAGATAATGGAAGCATCAAAGAGACTAGAGGAAGGTGTAAGA

               2051   -   2101
UN18944        --> GGAATCAGTGAACTGTTTGTAGTTGGAAAGCCAGATATGACAATCGTGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD564253       <-- ..................................................
FD940294       <-- ..................................................
EY927712       <-- GGAATCAGTGAACTGTTTGTAGTTGGAAAGCCAGATATGACAATCGTGGC
FY454345       --> ..................................................
FY453112       --> ..................................................
EY931856       --> ..................................................
FY442531       --> ..................................................
FY446901       --> ..................................................
FD941674       --> ..................................................
EY937582       --> GGAATCAGTGAACTGTTTGTAGTTGGAAAGCCAGATATGACAATCGTGGC

               2101   -   2151
UN18944        --> GTTTGGTTCTAAAGCATTAGATATCTTTGAGGTTAATGACATCATGTCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD564253       <-- ..................................................
FD940294       <-- ..................................................
EY927712       <-- GTTTGGTTCTAAAGCATTAGATATCTTTGAGGTTAATGACATCATGTCTT
FY454345       --> ..................................................
FY453112       --> ..................................................
EY931856       --> ..................................................
FY442531       --> ..................................................
FY446901       --> ..................................................
FD941674       --> ..................................................
EY937582       --> GTTTGGTTCTAAAGCATTAGATATCTTTGAGGTTAATGACATCATGTCTT

               2151   -   2201
UN18944        --> CAAAAGGTTGGCATCTGAATGCACTACAGAGACCCAACAGCATTCATATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD564253       <-- ..................................................
FD940294       <-- ..................................................
EY927712       <-- CAAAAGGTTGGCATCTGAATGCACTACAGAGACCCAACAGCATTCATATA
FY454345       --> ..................................................
FY453112       --> ..................................................
EY931856       --> ..................................................
FY442531       --> ..................................................
FY446901       --> ..................................................
FD941674       --> ..................................................
EY937582       --> CAAAAGGTTGGCATCTGAATGCACTACAGAGACCCAACAGCATTCATATA

               2201   -   2251
UN18944        --> TGTGTAACTCTTCAACACGTCCCTGTGGTCGATGACTTCCTCCAGGATCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD564253       <-- ..................................................
FD940294       <-- ..................................................
EY927712       <-- TGTGTAACTCTTCAACACGTCCCTGTGGTCGATGACTTCCTCCAGGATCT
FY454345       --> ..................................................
FY453112       --> ..................................................
EY931856       --> ..................................................
FY442531       --> ..................................................
FY446901       --> ..................................................
FD941674       --> ..................................................
EY937582       --> TGTGTAACTCTTCAACACGTCCCTGTGGTCGATGACTTCCTCCAGGATCT

               2251   -   2301
UN18944        --> GCGTGAGGCTGTTGAAACTGTGAAAGCAAACCCAGGACCGATCACAGGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD564253       <-- ..................................................
FD940294       <-- ..................................................
EY927712       <-- GCGTGAGGCTGTTGAAACTGTGAAAGCAAACCCAGGACCGATCACAGGTG
FY454345       --> ..................................................
FY453112       --> ..................................................
EY931856       --> ..................................................
FY442531       --> ..................................................
FY446901       --> ..................................................
FD941674       --> ..................................................
EY937582       --> GCGTGAGGCTGTTGAAACTGTGAAAGCAA.....................

               2301   -   2351
UN18944        --> GCTTGGCTCCAATATATGGAGCAGCTGGGAAGATGCCGGACCGAGGGATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD564253       <-- ..................................................
FD940294       <-- ..................................................
EY927712       <-- GCTTGGCTCCAATATATGGAGCAGCTGGGAAGATGCCGGACCGAGGGATG
FY454345       --> ..................................................
FY453112       --> ..................................................
EY931856       --> ..................................................
FY442531       --> ..................................................
FY446901       --> ..................................................
FD941674       --> ..................................................
EY937582       --> ..................................................

               2351   -   2401
UN18944        --> GTGAATGAGCTTCTTGTTAGTTTCATGGACAGCCAATACTAGTCAAGTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD564253       <-- ..................................................
FD940294       <-- ..................................................
EY927712       <-- GTGAATGAGCTTCTTGTTAGTTTCATGGACAGCCAATACTAGTCAAGTTT
FY454345       --> ..................................................
FY453112       --> ..................................................
EY931856       --> ..................................................
FY442531       --> ..................................................
FY446901       --> ..................................................
FD941674       --> ..................................................
EY937582       --> ..................................................

               2401   -   2451
UN18944        --> CTTTTCCAAGGATTGAGTAAATTGATGATTATCACATTTTCAAGTTGCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD564253       <-- ..................................................
FD940294       <-- ..................................................
EY927712       <-- CTTTTCCAAGGATTGAGTAAATTGATGATTATCACATTTTCAAGTTGCAA
FY454345       --> ..................................................
FY453112       --> ..................................................
EY931856       --> ..................................................
FY442531       --> ..................................................
FY446901       --> ..................................................
FD941674       --> ..................................................
EY937582       --> ..................................................

               2451   -   2501
UN18944        --> GAGGCAAAAACACTGTACATTCACAACCTGATTGTTTGGTGGTCTGTCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD564253       <-- ..................................................
FD940294       <-- ..................................................
EY927712       <-- GAGGCAAAAACACTGTACATTCACAACCTGATTGTTTGGTGGTCTGTCCT
FY454345       --> ..................................................
FY453112       --> ..................................................
EY931856       --> ..................................................
FY442531       --> ..................................................
FY446901       --> ..................................................
FD941674       --> ..................................................
EY937582       --> ..................................................

               2501   -   2551
UN18944        --> ACTTAAATTTCATCACACTTTATAACAAAAAAAAAACTCATTTCGTTACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD564253       <-- ..................................................
FD940294       <-- ..................................................
EY927712       <-- ACTTAAATTTCATCACACTTTATAACAAAAAAAAAACTCATTTCGTTACA
FY454345       --> ..................................................
FY453112       --> ..................................................
EY931856       --> ..................................................
FY442531       --> ..................................................
FY446901       --> ..................................................
FD941674       --> ..................................................
EY937582       --> ..................................................

               2551   -   2601
UN18944        --> TTACACATTCAGAAAAAGAAATAATAAAGATTGATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD564253       <-- ....................................
FD940294       <-- ....................................
EY927712       <-- TTACACATTCAGAAAAAGAAATAATAAAGATTGATC
FY454345       --> ....................................
FY453112       --> ....................................
EY931856       --> ....................................
FY442531       --> ....................................
FY446901       --> ....................................
FD941674       --> ....................................
EY937582       --> ....................................