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Alignment for radish unigene UN18961

               1      -     51
UN18961        --> GGAATGAATAGTGATGATGTGGAAGAGCTGAATAGCAATCTCTTTGAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737646       <-- ..................................................
EX777827       <-- ..................................................
FD545779       <-- ..................................................
FD561865       <-- ..................................................
FD539251       <-- ..................................................
FD549743       --> GGAATGAATAGTGATGATGTGGAAGAGCTGAATAGCAATCTCTTTGAAAA
FD543414       --> ..................................................
EX774068       --> ..................................................
EW733510       --> ..................................................
FD565909       --> ..................................................

               51     -    101
UN18961        --> CATTTGCATGATTGCTGGAAGCCATGCGTCGACCCTAGACAGACTGTATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737646       <-- ..................................................
EX777827       <-- ..................................................
FD545779       <-- ..................................................
FD561865       <-- ..................................................
FD539251       <-- ..................................................
FD549743       --> CATTTGCATGATTGCTGGAAGCCATGCGTCGACCCTAGACAGACTGTATG
FD543414       --> ..................................................
EX774068       --> ..................................................
EW733510       --> ..................................................
FD565909       --> ..................................................

               101    -    151
UN18961        --> CATGGGAGCGGAAGCTCTATGATGAAGTTAAGGGGAGTCAAACTGTGCGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737646       <-- ..................................................
EX777827       <-- ..................................................
FD545779       <-- ..................................................
FD561865       <-- ..................................................
FD539251       <-- ..................................................
FD549743       --> CATGGGAGCGGAAGCTCTATGATGAAGTTAAGGGGAGTCAAACTATGCGG
FD543414       --> ........gGGAAGCTCTATGATGAAGTTAAGGGGAGTCAAACTGTGCGG
EX774068       --> .................................GGAGTCAAACTGTCCGG
EW733510       --> ..................................................
FD565909       --> ..................................................

               151    -    201
UN18961        --> AGAGAGTATGATGAAAAGTGCAGAGTTTTAAGAGAACTTGAATCAGAAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737646       <-- ..................................................
EX777827       <-- ..................................................
FD545779       <-- ..................................................
FD561865       <-- ..................................................
FD539251       <-- ..................................................
FD549743       --> AGAGAGTATGACGAAAAGTGCAGAGTTTTAAGAGAACTTGAATCAGAAGG
FD543414       --> AGAGAGTATGATGAAAAGTGCAGAGTTCTAAGAGAACTTGAATCAGAAGG
EX774068       --> AGAGAGTATGATGAAAAGTGCAGAGTTTTAAGAGAACTTGAATCAGAAGG
EW733510       --> ..................................................
FD565909       --> ..................................................

               201    -    251
UN18961        --> CAAAGGTTCAAAAACAATAGACAAGACACGTGCAGTAGTCAAGGACCTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737646       <-- ..................................................
EX777827       <-- ..................................................
FD545779       <-- ..................................................
FD561865       <-- ..................................................
FD539251       <-- ..................................................
FD549743       --> CAAAGGTTCAAAAACAATAGACAAGACACGTGCAGTAGTCAAGGACCTTC
FD543414       --> CAAAGGTTCAAAAACAATAGACAAGACACGTGCGGTAGTCAAGGACCTTC
EX774068       --> CAAAGGTTCAAAAACAATAGACAAGACACGTGCAGTAGTCAAGGACCTTC
EW733510       --> ..................................................
FD565909       --> ..................................................

               251    -    301
UN18961        --> ACTCCAGAATCAGAGTGGCTATTCATAGGATCGACTCAATATCGAGACGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737646       <-- ..................................................
EX777827       <-- ..................................................
FD545779       <-- ..................................................
FD561865       <-- ..................................................
FD539251       <-- ..................................................
FD549743       --> ACTCCAGAATCAGAGTGGCTATTCACAGGATCGACTCAATATCGAGACGG
FD543414       --> ACTCCAGAATCAGAGTGGCTATTCATAGGATCGACTCAATATCGAGACGG
EX774068       --> ACTCCAGAATCAGAGTGGCTATTCATAGGATCGACTCAATATCGAGACGG
EW733510       --> .........................................gCGAGACGG
FD565909       --> ..................................................

               301    -    351
UN18961        --> ATTGAAGAGCTCCGTGACAAAGAGCTACAACCTCAACTCGAAGAACTCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737646       <-- ...................................ACTCGAAGAACTCAT
EX777827       <-- .........................................AGAACTCAT
FD545779       <-- ..................................................
FD561865       <-- ..................................................
FD539251       <-- ..................................................
FD549743       --> ATTGAAGAGCTCCGTGACAAAGAGCTACAACCTCAACTCGAAGAACTCAT
FD543414       --> ATTGAAGAGCTCCGTGACAAAGAGCTGCAACCTCAACTCGAGGAACTCAT
EX774068       --> ATTGAAGAGCTCCGTGACAAAGAGCTCCAACCTCAACTCGAAGAACTCAT
EW733510       --> ATTGAAGAGCTCCGTGACAAGGAGCTACAGCCTCAACTCGAAGAACTCAT
FD565909       --> ..................................................

               351    -    401
UN18961        --> TGAAGGGTTGAGTCGAATGTGGGAAGTGATGTTGGAATGCCACAAGGTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737646       <-- TGAAGGGTTGAGTCGAATGTGGGAAGTGATGTTGGAATGCCACAAGGTGC
EX777827       <-- TGAAGGGTTGAGTCGAATGTGGGAAGTGATGTTGGAATGCCACAAGGTTC
FD545779       <-- .................................................C
FD561865       <-- ..................................................
FD539251       <-- ..................................................
FD549743       --> TGAAGGGTTGAGTCGAATGTGGGAAGTGATGTTGGAATGCCACAAGGTGC
FD543414       --> TGAAGGGTTGAGTCGAATGTGGGAAGTGATGTTGGAATGCCACAAGGTTC
EX774068       --> TGAAGGGTTGAGTCGAATGTGGGAAGTGATGTTGGAATGCCACAAGGTTC
EW733510       --> TGAAGGGTTGAGTCGAATGTGGGAAGTGATGTTGGAATGCCACAAGGTGC
FD565909       --> ..................................................

               401    -    451
UN18961        --> AGTTTAGGTTAATCTCAGCGTGTCACAGAAGCGGTAACATTAAACTCAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737646       <-- AGTTTAGGTTAATCTCAGCGTGTCACAGAAGCGGTAACATTAAACTCAAC
EX777827       <-- AGTTTAGGTTAATCTCAGCGTGTCACAGAAGCGGTAACATTAAACTCAAC
FD545779       <-- AGTTTAGGTTA-TCTCAGCGTGTCACAGAAGCGGTAACATTAAACTCAAC
FD561865       <-- ..................................................
FD539251       <-- ..................................................
FD549743       --> AGTTTAGGTTAATCTCAGCGTGTCACAGAAGCGGTAACATTAAACTCAAC
FD543414       --> AGTTTAGGTTAATCTCAGCGTGTCACAGAAGCGGTAACATTAAACTCAAC
EX774068       --> AGTTTAGGTTAATCTCAGCGTGTCACAGAAGCGGTAACATTAAACTCAAC
EW733510       --> AGTTTAGGTTAATCTCAGCGTGTCACAGAAGCGGTAACATTAAACTCAAC
FD565909       --> ............................agGCGGTAACATTAAACTCAAC

               451    -    501
UN18961        --> ATGCAGTCAGAGTTGCACAGACAAGTAACATGTCACCTAGAAGATGAACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737646       <-- ATGCAGTCAGAGTTGCACAGACAAGTAACATGTCACCTAGAAGATGAACT
EX777827       <-- ATGCAGTCAGAGTTGCACAGACAAGTAACATGTCACCTTGAAGATGAACT
FD545779       <-- ATGCAGTCAGAGTTGCGCAGACAAGTAACATGTCACCTAGAAGATGAACT
FD561865       <-- ........................................AAGATGAACT
FD539251       <-- ..................................................
FD549743       --> ATGCAGTCAGAGTTGCGCAGACAAGTAACATGTCACCTAGAAGATGAACT
FD543414       --> ATGCAGTCAGAGCTGCACAGACAAGTAACATGTCACCTAGAAGATGAACT
EX774068       --> ATGCAGTCAGAGTTGCACAGACAAGTAACATGTCACCTTGAAGATGAACT
EW733510       --> ATGCAGTCAGAGTTGCACAGACAAGTAACATGTCACCTAGAAGATGAACT
FD565909       --> ATGCAGTCAGAGTTGCACAGACAAGTAACATGTCACCTAGAAGATGAACT

               501    -    551
UN18961        --> CAGGGGG-TTGGCTTCAAGCTTCACAAAGTGGATCACAGGTCAAAGATCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737646       <-- CAGGGGG-TTGGCTTCAAGCTTCACAAAGTGGATCACAGGTCAAAGATCG
EX777827       <-- CAGGGGG-TTGGCTTCAAGCTTCACAAAGTGGATCACAGGTCAAAGATCA
FD545779       <-- CAGGGGG-TTGGCTTCAAGCTTCA-AAAGTGGATCACAGGTCAAAGATCG
FD561865       <-- CAGGGGG-TTGGCTTCAAGCTTCACAAAGTGGATCACAGGTCAAAGATCG
FD539251       <-- ..................................................
FD549743       --> CAGGGGGGTTGGCTTCAAGCTTCA-AAAGTGGATCACAGGTCAAAGATCG
FD543414       --> CAGGGGG-TTGGCTTCAAGCTTCACAAAGTGGATCACAGGTCAAAGATCA
EX774068       --> CAGGGGG-TTGGCTTCAAGCTTCACAAAGTGGATCACAGGTCAAAGATCA
EW733510       --> CAGGGGG-TTGGCTTCAAGCTTCACAAAGTGGATCACAGGTCAAAGATCG
FD565909       --> CAGGGGG-TTGGCTTCAAGCTTCACAAAGTGGATCACAGGTCAAAGATCG

               551    -    601
UN18961        --> TACATTAAAGCTATAAACGAATGGCTGGAGAAATGTGTCACCTTACCACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737646       <-- TACATTAAAGCTATAAACGAATGGCTGGAGAATTGTGTCACCTTACCACA
EX777827       <-- TATATTAAAGCTATAAACGAATGGCTGGAGAAATGTGTCACCTTACCACA
FD545779       <-- TACATTAAAGCTATAAACGAATGGCTGGAGAAATGTGTCACCTTACCACA
FD561865       <-- TACATTAAAGCTATAAACGAATGGCTGGAGAAATGTGTCACCTTACCACA
FD539251       <-- ..................................................
FD549743       --> TACATTAAAGCTATAAACGAATGGCTGGAGAAATGTGTCACCTTACCACA
FD543414       --> TATGTTAAAGCTATAAACGAATGGCTGGAGAAATGTGTCACCTTACCACA
EX774068       --> TATATTAAAGCTATAAACGAATGGCTGGAGAAATGTGTCACCTTACCACA
EW733510       --> TACATTAAAGCTATAAACGAATGGCTGGAGAATTGTGTCACCTTACCACA
FD565909       --> TACATTAAAGCTATAAACGAATGGCTGGAGAAATGTGTCACCTTACCACA

               601    -    651
UN18961        --> AAGATCCTCCAAGCGGAAAAGGCGCGTGCCAGAAATCTCTCCGAGGAACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737646       <-- AAGATCCTCCAAGCGGAAAAGGCGCGTGCCAGAAATCTCTCCGAGGAACC
EX777827       <-- AAGATCCTCCAAGCGGAAAAGGCGCGTGCCTGAAATCTCTCCGAGGAACC
FD545779       <-- AAGATCCTCCAAGCGGAAAAGGCGCGTGCCAGAAATCTCTCCGAGGAACC
FD561865       <-- AAGATCCTCCAAGCGGAAAAGGCGCGTGCCAGAAATCTCTCCGAGGAACC
FD539251       <-- .............................ctGAAATCTTTCCGAGGAACC
FD549743       --> AAGATCCTCCAAGCGGAAAAGGCGCGTGCCAGAAATCTCTCCGAGGAACC
FD543414       --> AAGATCCTCCAAGCGGAAAAGGCGCGTGCCTGAAATCTCTCCGAGGAACC
EX774068       --> AAGATCCTCCAAGCGGAAAAGGCGCGTGCCTGAAATCTCTCCGAGGAACC
EW733510       --> AAGATCCTCCAAGCGGAAAAGGCGCGTGCCAGAAATCTCTCCGAGGAACC
FD565909       --> AAGATCCTCCAAGCGGAAAAGGCGCGTGCCAGAAATCTCTCCGAGGAACC

               651    -    701
UN18961        --> ATGGTCCCCCCATTTACGCAACATGTGGAATCTGGCTAGAGAAGCTCGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737646       <-- ATGGTCCCCCCATTTACGCAACATGTGGAATCTGGCTAGAGAAGCTCGAA  Raphanus sativus cv Rat-Tail Radish #3870
EX777827       <-- ATGGTCCCCCCATTTACGCAACATGTGGAATCTGGCTAGAGAAGCTCGAA  Raphanus raphanistrum subsp. landra
FD545779       <-- ATGGTCCTCCCATTTACGCAACATGTGGAATCTGGCTAGAGAAGCTCGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD561865       <-- ATGGTCCCCCCATTTACGCAACATGTGGAATCTGGCTAGAGAAGCTCGAA  Raphanus sativus var. oleiformis
FD539251       <-- ATGGTCCTCCCATTTACGCAACATGTGGGATCTGGCTAGAGAAGCTCGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD549743       --> ATGGTCCTCCCATTTACGCAACATGTGGAATCTGGCTAGAGAAGCTCGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD543414       --> ATGGTCCTCCCATTTACGCAACATGTGGGATCTGGCTAGAGAAGCTCGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX774068       --> ATGGTCCCCCCATTTACGCAACATGTGGAATCTGGCTAGAGAAGCTCGAA  Raphanus raphanistrum subsp. landra
EW733510       --> ATGGTCCCCCCATTTACGCAACATGTGGAATCTGGCTAGAGAAGCTCGAA  Raphanus sativus cv Rat-Tail Radish #3870
FD565909       --> ATGGTCCCCCCATTTACGCAACATGTGGAATCTGGCTAGAGAAGCTCGAA  Raphanus sativus var. oleiformis

               701    -    751
UN18961        --> GCTTTGCCTACCAAAGAGGTTTCGAGCTCCATCAAAGCGCTTGCTTCTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737646       <-- GCTTTGCCTACCAAAGAGGTTTCGAGCTCCATCAAAGCGCTTGCTTCTGA
EX777827       <-- GCTTTACCTACCAAAGAGGTTTCGAGCTCCATCAAAGCGCTTGCTTCTGA
FD545779       <-- GCTTTACCTACCAAAGAGGTTTCGAGCTCCATCAAAGCGCTTGCTTCTGA
FD561865       <-- GCTTTGCCTACCAAAGAGGTTTCGAGCTCCATCAAAGCGCTTGCTTCTGA
FD539251       <-- GCTTTGCCTACCAAAGAGGTTTCGAGCTCCATCAAAGCGCTTGCTTCTGA
FD549743       --> GCTTT-ACTACCAA....................................
FD543414       --> GCTTTGCCTACCAAAGAGGTTTCGAGCTCCATCAAAGCGCTTGCTTCTGA
EX774068       --> GCTTTACCTACCAAAGAGGTTTCGAGCTCCATCAAAGCGCTTGCTTCTGA
EW733510       --> GCTTTGCCTACCAAAGAGGTTTCGAGCTCCATCAAAGCGCTTGCTTCTGA
FD565909       --> GCTTTGCCTACCAAAGAGGTTTCGAGCTCCATCAAAGCGCTTGCTTCTGA

               751    -    801
UN18961        --> TGTCGCCAGGTTCTTGCCACGGCAGGAGAAGAATCGCAACAAGAAACATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737646       <-- TGTCGCCAGGTTCTTGCCACGGCAGGAGAAGAATCGCAACAAGAAACATC
EX777827       <-- TGTCGCCAGGTTCTTGCCACGGCAGGAGAAGAATCGCAACAAGAAACATC
FD545779       <-- TGTCGCCAGGTTCTTGCCACGGCAGGAGAAGAATCGCAACAAGAAACATC
FD561865       <-- TGTCGCCAGGTTCTTGCCACGGCAGGAGAAGAATCGCAACAAGAAACATC
FD539251       <-- TGTCGCCAGGTTCTTGCCACGGCAGGAGAAGAATCGCAACAAGAAACATC
FD549743       --> ..................................................
FD543414       --> TGTCGCCAGGTTCTTGCCACGGCAG-AGAAGAATCGCAcagaaac.....
EX774068       --> TGTCGCCAGGTTCTTGCCACGGCAGGAGAAGAATCGCAACAAGAAACATC
EW733510       --> TGTCGCCAGGTTCTTGCCACGGCAGGAGAAGAATCGCAACAAGAAACATC
FD565909       --> TGTCGCCAGGTTCTTGCCACGGCAGGAGAAGAATCGCAACAAGAAACATC

               801    -    851
UN18961        --> GGTCTGGCGAGAACCAGAACGATCACCTGTTGCAAGATGAGACATTGGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737646       <-- GGTCTGGCGAGAACCAGAACGATCACCTGTTGCAAGATGAGACATTAGAA  Raphanus sativus cv Rat-Tail Radish #3870
EX777827       <-- GGTCTGGCGAGAACCAGAACGATCACCTGTTGCAAGATGAGACGTTGGAA  Raphanus raphanistrum subsp. landra
FD545779       <-- GGTCTGGCGAGAACCAAAACGATCACCTGTTGCAAGATGAGACGTTGGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD561865       <-- GGTCTGGCGAGAACCAGAACGATCACCTGTTGCAAGATGAGACATTGGAA  Raphanus sativus var. oleiformis
FD539251       <-- GGTCTGGCGAGAACCAAAACGATCACCTGTTGCAAGATGAGACATTGGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD549743       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD543414       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX774068       --> GGTCTGGCGAGA-CCAGAACGATCACCTGTTGCAAGATGAGACGTTGGAA  Raphanus raphanistrum subsp. landra
EW733510       --> GGTCTGGCGAGAACCAGAACGATCACCTGTTGCAAGATGAGACATTAGAA  Raphanus sativus cv Rat-Tail Radish #3870
FD565909       --> GGTCTGGCGAGAACCAGAACGATCACCTGTTGCAAGATGAGACATTGGAA  Raphanus sativus var. oleiformis

               851    -    901
UN18961        --> GATTGTGGTCCGGGATTTGATCGGTTTAGGACAAGCTTGGAAGGATTTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737646       <-- GATTGTGGTCCGGGATTTGATCGGTTTAGGACAAGCTTGGAAGGATTTGC
EX777827       <-- GATTGTGGTCCGGGATTTGATCGGTTTAGGACAAGCTTGGAAGGATTTGC
FD545779       <-- GATTGTGGTCCGGGATTTGATCGGTTTAGGACAAGCTTGGAAGGATTTGC
FD561865       <-- GATTGTGGTCCGGGATTTGATCGGTTTAGGACAAGCTTGGAAGGATTTGC
FD539251       <-- GATTGTGGTCCGGGATTTGATCGGTTTAGGACACGCTTGGAAGGATTTGC
FD549743       --> ..................................................
FD543414       --> ..................................................
EX774068       --> GATT..............................................
EW733510       --> GATTGTGGTCCGGGATTTGATCGGTTTAGGACAAGCTTGGAAGGATTTGC
FD565909       --> GATTGTGGTCCGGGATTTGATCGGTTTAGGACAAGCTTGGAAGGATTTGC

               901    -    951
UN18961        --> TGGCCAGCTCAACCAGTTTGCAGAACTGTCAGTGAAATTGTATGAGGAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737646       <-- TGGCCAGCTCAACCAGTTTGCAGAACTGTCAGTGAAATTGTATGAGGAAC
EX777827       <-- TGGCCAGCTCAACCAGTTTGCAGAACTGTCAGTGAAATTGTATGAGGAAC
FD545779       <-- TGGCCAGCTCAACCAGTTTGCAGAACTGTCAGTGAAATTGTATGAGGAAC
FD561865       <-- TGGCCAGCTCAACCAGTTTGCAGAACTGTCAGTGAAATTGTATGAGGAAC
FD539251       <-- TGGCCAGCTCAACCAGTTTGCAGAATTGTCTGTGAAATTGTATGAGGAAC
FD549743       --> ..................................................
FD543414       --> ..................................................
EX774068       --> ..................................................
EW733510       --> TGGCCAGCTCAACCAGTTTGCAGAACTGTCAGTGAAATTGTATGAGGAAC
FD565909       --> TGGCCAGCTCAACCAGTTTGCAGAACTGTCAGTGAAATTGTATGAGGAAC

               951    -   1001
UN18961        --> TTAAGAAGGGTATCCAAGAAGCCAAGAACAAGTACGAGCATATGAAGGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737646       <-- TTAAGAAGGGTATCCAAGAAGCCAAGAACAAGTACGAGCGTATGAAGGCT
EX777827       <-- TTAAGAAGGGTATCCAAGAAGCCAAGAACAAGTACGAGCATATGAAGGCT
FD545779       <-- TTAAGAAGGGTATCCAAGAAGCCAAGAACAAGTACGAGCATATGAAGGCT
FD561865       <-- TTAAGAAGGGTATCCAAGAAGCCAAGAACAAGTACGAGCATATGAAGGCT
FD539251       <-- TTAAGAAGGGTATCCAAGAAGCCAAGAACAAGTACGAGCATATGAAGGCT
FD549743       --> ..................................................
FD543414       --> ..................................................
EX774068       --> ..................................................
EW733510       --> TTA...............................................
FD565909       --> TTAAGAAGGGTATCCAAGAAGCCAAGAACAAGTACGAGCATATGAAGGCT

               1001   -   1051
UN18961        --> TATTCCCAGGGTAACTAAGATTTATTTTATTTTTTTCATTTTCTGGTAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737646       <-- TATTCCCAGGGTAACCAAGATTTATTTTATTTTTTTCATTTTCTGGTAAG
EX777827       <-- TATTCCCAGGGTAACTAAGATTTATTTTATTTTTTTCATTTTCTGGTAAG
FD545779       <-- TATTCCCAGGGTAACTAAGATTTATTTTATTTTTTTCATTTTCTGGTAAG
FD561865       <-- TATTCCCAGGGTAACTAAGATTTATTTTATTTTTTTCATTTTCTGGTAAG
FD539251       <-- TATTCCCAGGGTAATTAAGATTTATTTTATTTTTTTCATTTTCTGGTAAG
FD549743       --> ..................................................
FD543414       --> ..................................................
EX774068       --> ..................................................
EW733510       --> ..................................................
FD565909       --> TATTCCCAGGGTAACTAAGATTTATTTTATTTTTTTCATTTTCTGGTAAG

               1051   -   1101
UN18961        --> AATGGAGTTTGTGACAGGTCAAAGTTTTAAAGAGACAAATTTGATTAAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737646       <-- AATGGAGTTTGTGGCAGGTCAAAGTTTTAAAGAGACAAATTTGATTAAAC
EX777827       <-- AATGGAGTTTGTGACAGGTCAAAGTTTTAAAGAGACAAATTGGATc....
FD545779       <-- AATGGAGTTTGTGACAGGTCAAGGTTTTAAAGAGACAAATTGGATTAAAC
FD561865       <-- AATGGAGTTTGTGACAGGTCAAAGTTTTAAAGAGACAAATTTGATTcccc
FD539251       <-- AATGGAGTTTGTGACAGGTCAAAGTTTTAAAGAGACAAATTGGATTAAAC
FD549743       --> ..................................................
FD543414       --> ..................................................
EX774068       --> ..................................................
EW733510       --> ..................................................
FD565909       --> AATGGAGTTTGTGACAGGTCAAAGTTTTAAAGAGACAAATTTGATTcccc

               1101   -   1151
UN18961        --> ATTTGTAAATGCGAGAGAGGTATCTATTATAAGAAAATTGCTTCAAGCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737646       <-- ATTTGTAAATTCGAGAGAGGTATCTATT......................
EX777827       <-- ..................................................
FD545779       <-- ATTTGTAAATGCTAGAGAGGTATCTATTATAAGAAAATTGCTTCAAGCAT
FD561865       <-- t.................................................
FD539251       <-- ATTTGTAAATGCGAGAGAGGTATgaggtatctattataagaaaattgctc
FD549743       --> ..................................................
FD543414       --> ..................................................
EX774068       --> ..................................................
EW733510       --> ..................................................
FD565909       --> t.................................................

               1151   -   1201
UN18961        --> GATGTGGAAGGTAGTTGGTTATAATAGTTGATGTAGCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737646       <-- .......................................
EX777827       <-- .......................................
FD545779       <-- GATGTGGAAGGTAGTTGGTTATAATAGTTGATGTAGCTC
FD561865       <-- .......................................
FD539251       <-- c......................................
FD549743       --> .......................................
FD543414       --> .......................................
EX774068       --> .......................................
EW733510       --> .......................................
FD565909       --> .......................................