Library    |     Search    |     Batch query    |     SNP    |     SSR  

Alignment for radish unigene UN18977

               1      -     51
UN18977        --> GGAAAGTCCCAAAAGAAGATCCACCGCT-ATCGAAGATCTGGTCCGCCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737820       <-- ..................................................
EX899969       <-- ..................................................
EY920284       <-- ..................................................
FD553206       <-- ..................................................
EV540022       <-- ..................................................
FD966859       <-- ..................................................
EV542224       <-- ..................................................
FD953402       <-- ..................................................
EV568253       --> GGAAAGTCCCAAAAGAAGATCCACCGCT-ATCGAAGATCTGGTCCGCCTC
EV568560       --> GGAAAGTCCCAAAAGAAGATCCACCGCT-ATCGAAGATCTGGTCCGCCTC
FD970521       --> .ggAAGTCCCAAAAGAAGATCCACCGCTTATCGAAGATCTGGTCCGCCTC
EW733183       --> .....ggCCCAAAAGAAGATCCACCGCT-ATCGAAGATCTGGTCCGCCTC
EY941521       --> ...........................ggATCGAAGATCTGGTCCGCCTC
FD957758       --> ...........................ggATCGAAGATCTGGTCCGCCTC
EX895967       --> ..............................ggGAAGATCTGGTCCGCCTC
FY433613       --> ......................................CTGGTCCGCCTC
FY442910       --> ..................................................
FY451393       --> ..................................................
EV535305       --> ..................................................
EY924671       --> ..................................................

               51     -    101
UN18977        --> TGGTGTG--G--GGAGGGAGAGATGGCAGAAGACAAGGAAGCTACGACGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737820       <-- ..................................................
EX899969       <-- ..................................................
EY920284       <-- ..................................................
FD553206       <-- ..................................................
EV540022       <-- ..................................................
FD966859       <-- ..................................................
EV542224       <-- ..................................................
FD953402       <-- ..................................................
EV568253       --> TGGTGTG--G----AGGGAGAGATGGCAGAAGACAAGGAAGCTACGACGA
EV568560       --> TGGTGTG--G----AGGGAGAGATGGCAGAAGACAAGGAAGCTACGACTA
FD970521       --> TGGTGTGAAG--GGAGGGAGAGATGGCAGAAGACAAGGAAGCTACGACGA
EW733183       --> TGGTGTG--G----AGGGAGAGATGGCAGAAGACAAGGAAGCTACGACGA
EY941521       --> TGGTGTG--GAGGGAGGGAGAGATGGCAGAAGACAAGGAAGCTACGACGA
FD957758       --> -GGTGTG--GAGGGAGGGAGAGATGGCAGAAGACAAGGAAGCTACGACGA
EX895967       --> TGGTGTG--GAGGGAGGGAGAGATGGCAGAAGACAAGGAAGCTACGACGA
FY433613       --> TGGTGTGAAG--GGAGGGAGAGATGGCAGAAGACAAGGAAGCTACGACGA
FY442910       --> .........G--GGAGGGAGAGATGGCAGAAGACAAGGAAGCTACGACGA
FY451393       --> .........G--GGAGGGAGAGATGGCAGAAGACAAGGAAGCTACGACGA
EV535305       --> .........................................ggACGACGA
EY924671       --> ..................................................

               101    -    151
UN18977        --> GTTCACTGAGTCAAGGACTCGCTCCTCAAGACCCTGAAGATCCTCCCAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737820       <-- ...........................................TCCCAAG
EX899969       <-- ..................................................
EY920284       <-- ..................................................
FD553206       <-- ..................................................
EV540022       <-- ..................................................
FD966859       <-- ..................................................
EV542224       <-- ..................................................
FD953402       <-- ..................................................
EV568253       --> GTTCACTGAGTCAAGGACTCGCTCCTCAAGACCCTGAAGATCCTCCCAAG
EV568560       --> GTTCACTGAGTCAAGGACTCGCTCCTCAAGACCCTGAAGATCCTCCCAAG
FD970521       --> GTTCACTGAGTCAAGGACTCGCTCCTCAAGACCCTGAAGATCCTCCCAAG
EW733183       --> GTTCACTGAGTCAAGGACTCGCTCCTCAAGACCCTGAAGATCCTCCCAAG
EY941521       --> GTTCACTGAGTCAAGGACTCGCTCCTCAAGACCCTGAAGATCCTCCCAAG
FD957758       --> GTTCACTGAGTCAAGGACTCGCTCCTCAAGACCCTGAAGATCCTCCCAAG
EX895967       --> GTTCACTGAGTCAAGGACTCGCTCCTCAAGACCCTGAAGATCCTCCCAAG
FY433613       --> GTTCACTGAGTCAAGGACTCGCTCCTCAAGACCCTGAAGATCCTCCCAAG
FY442910       --> GTTCACTGAGTCAAGGACTCGCTCCTCAAGACCCTGAAGATCCTCCCAAG
FY451393       --> GTTCACTGAGTCAAGGACTCGCTCCTCAAGACCCTGAAGATCCTCCCAAG
EV535305       --> GTTCACTGAGTCAAGGACTCTCTCCTCAAGACCCTGAAGATCCTCCCAAG
EY924671       --> ..................................................

               151    -    201
UN18977        --> TCTCCTCCCAACTCTCCCAATTCTTCTACTCGCAAGGCTTGCTATGCTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737820       <-- TCTCCTCCCAACTCTCCCAATTCTTCTACTCGCAAGGCTTGCTATGCTGT
EX899969       <-- .........................CTACTCGTAAGGCTTGCTATGCTGT
EY920284       <-- ..................................................
FD553206       <-- ..................................................
EV540022       <-- ..................................................
FD966859       <-- ..................................................
EV542224       <-- ..................................................
FD953402       <-- ..................................................
EV568253       --> TCTCCTCCCAACTCTCCCAATTCTTCTACTCGCAAGGCTTGCTATGCTGT
EV568560       --> TCTCCTCCCAACTCTCCCAATTCTTCTACT....................
FD970521       --> TCTCCTCCCAACTCTCCCAATTCTTCTACTCGCAAGGCTTGCTATGCTGT
EW733183       --> TCTCCTCCCAACTCTCCCAATTCTTCTACTCGCAAGGCTTGCTATGCTGT
EY941521       --> TCTCCTCCCAACTCTCCCAATTCTTCTACTCGCAAGGCTTGCTATGCTGT
FD957758       --> TCTCCTCCCAACTCTCCCAATTCTTCTACTCGCAAGGCTTGCTATGCTGT
EX895967       --> TCTCCTCCCAACTCTCCCAATTCTTCTACTCGTAAGGCTTGCTATGCTGT
FY433613       --> TCTCCTCCCAACTCTCCCAATTCTTCTACTCGCAAGGCTTGCTATGCTGT
FY442910       --> TCTCCTCCCAACTCTCCCAATTCTTCTACTCGCAAGGCTTGCTATGCTGT
FY451393       --> TCTCCTCCCAACTCTCCCAATTCTTCTACTCGCAAGGCTTGCTATGCTGT
EV535305       --> TCTCCTCCCAACTCTCCCAATTCTTCTACTCGCAAGGCTTGCTATGCTGT
EY924671       --> ..................................................

               201    -    251
UN18977        --> TCTTCAGAGTTGGGTGTCCAAGAAGTTTATGACTGGCTTTGTCGTCCTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737820       <-- TCTTCAGAGTTGGGTGTCCAAGAAGTTTATGACTGGCTTTGTCGTCCTAT  Raphanus sativus cv Rat-Tail Radish #3870
EX899969       <-- TCTTCAGAGTTGGGTGTCAAAGAAGTTTATGACTGGCTTTGTCGTCCTAT  Raphanus sativus cv Early Scarlet Globe
EY920284       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD553206       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV540022       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD966859       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542224       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD953402       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV568253       --> TCTTCAGAGTTGGGTGTCCAAGAAGTTTATGACTGGCTTTGTCGTCCTAT  Raphanus raphanistrum subsp. landra
EV568560       --> ..................................................  Raphanus raphanistrum subsp. landra
FD970521       --> TCTTCAGAGTTGGGTGTCCAAGAAGTTTATGACTGGCTTTGTCGTCCTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW733183       --> TCTTCAGAGTTGGGTGTCCAAGAAGTTTATGACTGGCTTTGTCGTCCTAT  Raphanus sativus cv Rat-Tail Radish #3870
EY941521       --> TCTTCAGAGTTGGGTGTCAAAGAAGTTTATGACTGGCTTTGTCGTCCTAT  Raphanus sativus cv Early Scarlet Globe
FD957758       --> TCTTCAGAGTTGGGTGTCAAAGAAGTTTATGACTGGCTTTGTCGTCCTAT  Raphanus sativus cv Rat-Tail Radish #3870
EX895967       --> TCTTCAGAGTTGGGTGTCAAAGAAGTTTATGACTGGCTTTGTCGTCCTAT  Raphanus sativus cv Early Scarlet Globe
FY433613       --> TCTTCAGAGTTGGGTGTCCAAGAAGTTTATGACTGGCTTTGTCGTCCTAT  Raphanus sativus cv GSK3-1
FY442910       --> TCTTCAGAGTTGGGTGTCCAAGAAGTTTATGACTGGCTTTGTCGTCCTAT  Raphanus sativus cv GSK3-1
FY451393       --> TCTTCAGAGTTGGGTGTCCAAGAAGTTTATGACTGGCTTTGTCGTCCTAT  Raphanus sativus cv GSK3-1
EV535305       --> TCTTCAGAGTTGGGTGTCCAAGAAGTTTATGACTGGCTTTGTCGTCCTAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY924671       --> .........................................TCGTCCTAT  Raphanus raphanistrum subsp. landra

               251    -    301
UN18977        --> TTCCTGTTGCTGTTACATTCCTCATCACCTGGTGGTTTATCCAGTTCGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737820       <-- TTCCTGTTGCTGTTACATTCCTCATCACCTGGTGGTTTATCCAGTTCGTT
EX899969       <-- TTCCTGTTGCTGTTACATTCCTCATCACCTGGTGGTTTATCCAGTTCGTT
EY920284       <-- .......TGCTGTTACATTCCTCATCACCTGGTGGTTTATCCAGTTCGTT
FD553206       <-- ........................TCACCTGGTGGTTTATCCAGTTCGTT
EV540022       <-- ................................................TT
FD966859       <-- ..................................................
EV542224       <-- ..................................................
FD953402       <-- ..................................................
EV568253       --> TTCCTGTTGCTGTTACATTCCTCATCACCTGGTGGTTTATCCAGTTCGTT
EV568560       --> ..................................................
FD970521       --> TTCCTGTTGCTGTTACATTCCTCATCACCTGGTGGTTTATCCAGTTCGTT
EW733183       --> TTCCTGTTGCTGTTACATTCCTCATCACCTGGTGGTTTATCCAGTTCGTT
EY941521       --> TTCCTGTTGCTGTTACATTCCTCATCACCTGGTGGTTTATCCAGTTCGTT
FD957758       --> TTCCTGTTGCTGTTACATTCCTCATCACCTGGTGGTTTATCCAGTTCGTT
EX895967       --> TTCCTGTTGCTGTTACATTCCTCATCACCTGGTGGTTTATCCAGTTCGTT
FY433613       --> TTCCTGTTGCTGTTACATTCCTCATCACCTGGTGGTTTATCCAGTTCGTT
FY442910       --> TTCCTGTTGCTGTTACATTCCTCATCACCTGGTGGTTTATCCAGTTCGTT
FY451393       --> TTCCTGTTGCTGTTACATTCCTCATCACCTGGTGGTTTATCCAGTTCGTT
EV535305       --> TTCCTGTTGCTGTTACATTCCTCATCACCTGGTGGTTTATCCAGTTCGTT
EY924671       --> TTCCTGTTGCTGTTACATTCCTCATCACCTGGTGGTTTATCCAGTTCGTT

               301    -    351
UN18977        --> GATGGTTTCTTCAGTCCCATATACGAGAGCCTTGGTGTTGACATCTTTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737820       <-- GATGGTTTCTTCAGTCCCATATACGAGAGCCTTGGTGTTGACATCTTTGG  Raphanus sativus cv Rat-Tail Radish #3870
EX899969       <-- GATGGTTTCTTCAGTCCCATATACGAGAGCCTTGGTGTTGACATCTTTGG  Raphanus sativus cv Early Scarlet Globe
EY920284       <-- GATGGTTTCTTCAGTCCCATATACGAGACCCTTGGTGTTGACATCTTTGG  Raphanus raphanistrum subsp. landra
FD553206       <-- GATGGTTTCTTCAGTCCCATATACGAGAGCCTTGGTGTTGACATCTTTGG  Raphanus raphanistrum subsp. landra
EV540022       <-- GATGGTTTCTTCAGTCCCATATACGAGACCCTTGGTGTTGACATCTTTGG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD966859       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542224       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD953402       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV568253       --> GATGGTTTCTTCAGTCCCATATACGAGACCCTTGGTGTTGACATCTTTGG  Raphanus raphanistrum subsp. landra
EV568560       --> ..................................................  Raphanus raphanistrum subsp. landra
FD970521       --> GATGGTTTCTTCAGTCCCATATACGAGACCCTTGGTGTTGACATCTTTGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EW733183       --> GATGGTTTCTTCAGTCCCATATACGAGAGCCTTGGTGTTGACATCTTTGG  Raphanus sativus cv Rat-Tail Radish #3870
EY941521       --> GATGGTTTCTTCAGTCCCATATACGAGAGCCTTGGTGTTGACATCTTTGG  Raphanus sativus cv Early Scarlet Globe
FD957758       --> GATGGTTTCTTCAGTCCCATATACGAGAGCCTTGGTGTTGACATCTTTGG  Raphanus sativus cv Rat-Tail Radish #3870
EX895967       --> GATGGTTTCTTCAGTCCCATATACGAGAGCCTTGGTGTTGACATCTTTGG  Raphanus sativus cv Early Scarlet Globe
FY433613       --> GATGGTTTCTTCAGTCCCATATACGAGAGCCTTGGTGTTGACATCTTTGG  Raphanus sativus cv GSK3-1
FY442910       --> GATGGTTTCTTCAGTCCCATATACGAGAGCCTTGGTGTTGACATCTTTGG  Raphanus sativus cv GSK3-1
FY451393       --> GATGGTTTCTTCAGTCCCATATACGAGAGCCTTGGTGTTGACATCTTTGG  Raphanus sativus cv GSK3-1
EV535305       --> GATGGTTTCTTCAGTCCCATATACGAGACCCTTGGTGTTGACATCTTTGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY924671       --> GATGGTTTCTTCAGTCCCATATACGAGACCCTTGGTGTTGACATCTTTGG  Raphanus raphanistrum subsp. landra

               351    -    401
UN18977        --> ACTTGGGTTCATTACATCTGTACTTTTCACTTTCTTTGTCGGAATATTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737820       <-- ACTTGGGTTCATTACATCTGTACTTTTCACTTTCTTTGTCGGAATATTTG
EX899969       <-- ACTTGGGTTCATTACATCTGTACTTTTCACTTTCTTTGTCGGAATATTTG
EY920284       <-- ACTTGGGTTCATTACATCTGTACTTTTCACTTTCTTTGTCGGAATATTTG
FD553206       <-- ACTTGGGTTCATTACATCTGTACTTTTCACTTTCTTTGTCGGAATATTTG
EV540022       <-- ACTTGGGTTCATTACATCTGTACTTTTCACTTTCTTTGTCGGAATATTTG
FD966859       <-- ........................TTTCACTTTCTTTGTCGGAATATTTG
EV542224       <-- ..................................................
FD953402       <-- ..................................................
EV568253       --> ACTTGGGTTCATTACATCTGTACTTTTCACTTTCTTTGTCGGAATATTTG
EV568560       --> ..................................................
FD970521       --> ACTTGGGTTCATTACATCTGTACTTTTCACTTTCTTTGTCGGAATATTTG
EW733183       --> ACTTGGGTTCATTACATCTGTACTTTTCACTTTCTTTGTCGGAATATTTG
EY941521       --> ACTTGGGTTCATTACATCTGTACTTTTCACTTTCTTTGTCGGAATATT-G
FD957758       --> ACTTGGGTTCATTACATCTGTACTTTTCACTTTCTTTGTCGGAATATTTG
EX895967       --> ACTTGGGTTCATTACATCTGTACTTTTCACTTTCTTTGTCGGAATATTTG
FY433613       --> ACTTGGGTTCATTACATCTGTACTTTTCACTTTCTTTGTCGGAATATTTG
FY442910       --> ACTTGGGTTCATTACATCTGTACTTTTCACTTTCTTTGTCGGAATATTTG
FY451393       --> ACTTGGGTTCATTACATCTGTACTTTTCACTTTCTTTGTCGGAATATTTG
EV535305       --> ACTTGGGTTCATTACATCTGTACTTTTCACTTTCTTTGTCGGAATATTTG
EY924671       --> ACTTGGGTTCATTACATCTGTACTTTTCACTTTCTTTGTCGGAATATTTG

               401    -    451
UN18977        --> CGTCCTCGTGGCTTGGCTCTACGGTTTTCTGGCTTGGGGAGCAGTTTATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737820       <-- CGTCCTCGTGGCTTGGCTCTACGGTTTTCTGGCTTGGGGAGCAGTTTATA
EX899969       <-- CGTCCTCGTGGCTTGGTTCTACGGTTTTCTGGCTTGGGGAGCAGTTTATA
EY920284       <-- CGTCCTCGTGGCTTGGCTCTACGGTTTTCTGGCTTGGGGAGCAGTTTATA
FD553206       <-- CGTCCTCGTGGCTTGGCTCTACGGTTTTCTGGCTTGGGGAGCAGTTTATA
EV540022       <-- CGTCCTCGTGGCTTGGCTCTACGGTTTTCTGGCTTGGGGAGCAGTTTATA
FD966859       <-- CGTCCTCGTGGCTTGGCTCTACGGTTTTCTGGCTTGGGGAGCAGTTTATA
EV542224       <-- ................tTCTACGGTTTTCTGGCTTGGGGAGCAGTTTATA
FD953402       <-- ..................................TGGGGAGCAGTTTATA
EV568253       --> CGTCCTCGTGGCTTGGCTCTACGGTTTTCTGGCTTGGGGAGCAGTTTATA
EV568560       --> ..................................................
FD970521       --> CGTCCTCGTGGCTTGGCTCTACGGTTTTCTGGCTTGGGGAGCAGTTTATA
EW733183       --> CGTCCTCGTGGCTTGGCTCTACGGTTTTCTGGCTTGGGGAGCAGTTTATA
EY941521       --> CGTCCTCGTGG.......................................
FD957758       --> CGTCCTCGTGGCTTGGCTCTACGGTTTTCTGGCTTGGGGAGCAGTT....
EX895967       --> CGTCCTCGTGGCTTGGTTCTACGGTTTTCTGGCTTGGGGAGCAGTTTATA
FY433613       --> CGTCCTCGTGGCTTGGCTCTACGGTTTTCTGGCTTGGGGAGCAGTTTATA
FY442910       --> CGTCCTCGTGGCTTGGCTCTACGGTTTTCTGGCTTGGGGAGCAGTTTATA
FY451393       --> CGTCCTCGTGGCTTGGCTCTACGGTTTTCTGGCTTGGGGAGCAGTTTATA
EV535305       --> CGTCCTCGTGGCTTGGCTCTACGGTTTTCTGGCTTGGGGAGCAGTTTATA
EY924671       --> CGTCCTCGTGGCTTGGCTCTACGGTTTTCTGGCTTGGGGAGCAGTTTATA

               451    -    501
UN18977        --> AGGAGAATGCCCTTTGTGAGGCACCTTTATTCAGCTTCCAAACAAGTTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737820       <-- AGGAGAATCCCCTTTGTGAGGCACCTTTATTCAGCTTCCAAACAAGTTAG
EX899969       <-- AGAAGAATGCCCTTTGTGAGGCACCTTTATTCAGCTTCCAAACAAGTTAG
EY920284       <-- AGGAGAATGCCCTTTGTGAGGCACCTTTATTCAGCTTCCAAACAAGTTAG
FD553206       <-- AGGAGAATGCCCTTTGTGAGGCACCTTTATTCAGCTTCCAAACAAGTTAG
EV540022       <-- AGGA-AATGCCCTTTGTGAGGCACCTTTATTCAGCTTCCAAACAAGTTAG
FD966859       <-- AGGAGAATGCCCTTTGTGATGCACCTTTATTCAGCTTCCAAACAAGTTAG
EV542224       <-- AGGAGAATGCCCTTTGTGAAGCACCTTTATTCAGCTTCTAAACAAGTCAG
FD953402       <-- AGGAGAATGCCCTTTGTGAGGCACCTTTATTCAGCTTCCAAACAAGTTAG
EV568253       --> AGGAGAATGCCCTTTGTGAGGCACCTTTATTCAGCTTCCAAACAAGTTAG
EV568560       --> ..................................................
FD970521       --> AGGAGAATGCCCTTTGTGATGCACCTTTATTCAGCTTCCAAACAAGTTAG
EW733183       --> AGGAGAATCCCCTTTGTGAGGCACCTTTATTCAGCTTCCAAACAAGTTAG
EY941521       --> ..................................................
FD957758       --> ..................................................
EX895967       --> AGAAGAATGCCCTTTGTGAGGCACCTTTATTCAGCTTCCAAACAAGTTAG
FY433613       --> AGGAGAATGCCCTTTGTGAGGCACCTTTATTCAGCTTCCAAACAAGTTAG
FY442910       --> AGGAGAATGCCCTTTGTGAGGCACCTTTATTCAGCTTCCAAACAAGTTAG
FY451393       --> AGGAGAATGCCCTTTGTGAGGCACCTTTATTCAGCTTCCAAACAAGTTAG
EV535305       --> AGGA-AATGCCCTTTGTGAGGCACCTTTATTCAGCTTCCAAACAAGTTAG
EY924671       --> AGGAGAATGCCCTTTGTGAGGCACCTTTATTCAGCTTCCAAACAAGTTAG

               501    -    551
UN18977        --> CACTGCTATTTCTCCCGACCAAAACACAACCGCCTTTAAAGAGGTAGCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737820       <-- CACTGCTATTTCTCCCGACCAAAACACAACCGCCTTTAAAGAGGTAGCAA
EX899969       <-- CACTGCTATTTCTCCCGACCAAAACACAACCGCCTTTAAAGAGGTAGCAA
EY920284       <-- CACTGCTATTTCTCCCGACCAAAACACAACCGCCTTTAAAGAGGTAGCAA
FD553206       <-- CACTGCTATTTCTCCCGACCAAAACACAACCGCCCTTAAAGAGGTAGCAA
EV540022       <-- CACTGCTATTTCTCCCGACCAAAACACAACCGCCTTTAAAGAGGTAGCAA
FD966859       <-- CACTGCTATTTCTCCCGACCAAAACACAACCGCCTTTAAAGAGGTAGCAA
EV542224       <-- CACTGCTATTTCTCCCGACCAAAACACAACCGCCTTTAAAGAGGTAGCAA
FD953402       <-- CACTGCTATTTCTCCCGACCAAAACACAACCGCCTTTAAAGAGGTAGCAA
EV568253       --> CACTGCTATTTCTCCCGACCAAAACACAACCGCCTTTAAAGAGGTAGCAA
EV568560       --> ..................................................
FD970521       --> CACTGCTATTTCTCCCGACCAAAACACAACCGCCTTTAAAGAGGTAGCAA
EW733183       --> CACTGCTATTTCTCCCGACCAAAACACAACCGCCTTTAAAGAGGTAGCAA
EY941521       --> ..................................................
FD957758       --> ..................................................
EX895967       --> CACTGCTATTTCTCCCGACCAAAACACAACCGCCTTTAAAGAGGTAGCAA
FY433613       --> CACTGCTATTTCTCCCGACCAAAACACAACCGCCTTTAAAGAGGTAGCAA
FY442910       --> CACTGCTATTTCTCCCGACCAAAACACAACCGCCTTTAAAGAGGTAGCAA
FY451393       --> CACTGCTATTTCTCCCGACCAAAACACAACCGCCTTTAAAGAGGTAGCAA
EV535305       --> CACTGCTATTTCTCCCGACCAAAACACAACCGCCTTTAAAGAGGTAGCAA
EY924671       --> CACTGCTATTTCTCCCGACCAAAACACAACCGCCTTTAAAGAGGTAGCAA

               551    -    601
UN18977        --> TCATCCGTCACCCTCGCATTGGTGAATATGCCTTTGGATTTATCACATCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737820       <-- TCATCCGTCACCCTCGCATTGGTGAATATGCATTTGGATTTATCACATCA
EX899969       <-- TCATCCGTCACCCTCGCATTGGTGAATATGCCTTTGGATTTATGACATCA
EY920284       <-- TCATCCGTCACCCTCGCATTGGTGAATATGCATTTGGATTTATCACATCA
FD553206       <-- TCATCCGTCACCCTCGCATTGGTGAATATGCCTTTGGATTTATCACATCA
EV540022       <-- TCATCCATCACCCTCGCATTGGTGAATATGCCTTTGGATTTATCACATCA
FD966859       <-- TCATCCGTCACCCTCGCATTGGTGAATATGCCTTTGGATTTATCACATCA
EV542224       <-- TCACCCGTCACCCTCGCATTGGTGAATATGCATTTGGATTTATCACATCA
FD953402       <-- TCATCCGTCACCCTCGCATTGGTGAATATGCCTTTGGATTTATCACATCA
EV568253       --> TCATCCGTCACCCTCGCATTGGTGAATATGCATTTGGATTTATCACATCA
EV568560       --> ..................................................
FD970521       --> TCATCCGTCACCCTCGCATTGGTGAATATGCCTTTGGATTT.........
EW733183       --> TCATCCGTCACCCTCGCATTGGTGAATATGCATTTGGATTTATCACATCA
EY941521       --> ..................................................
FD957758       --> ..................................................
EX895967       --> TCATCC............................................
FY433613       --> TCATCCGTCACCCTCGCATTGGTGAATATGCCTTTGGATTTATCACATCA
FY442910       --> TCATCCGTCACCCTCGCATTGGTGAATATGCCTTTGGATTTATCACATCA
FY451393       --> TCATCCGTCACCCTCGCATTGGTGAATATGCCTTTGGATTTATCACATCA
EV535305       --> TCATCCATCACCCTCGCATTGGTGAATATGCCTTTGGATTTATCACATCA
EY924671       --> TCATCCGTCACCCTCGCATTGGTGAATATGCATTTGGATTTATCACATCA

               601    -    651
UN18977        --> TCGGTGACACTTCAGACGGACCAGGGAGAAGAGGAGTTGTGTAGTGTGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737820       <-- TCGGTGACACTTCAGACGGACCAGGGAGAAGAGGAGTTGTGTAGTGTGTA
EX899969       <-- TCGGTGACACTTCAGACGGACCAGGGAGAAGAGGAGTTGTGTAGTGTGTA
EY920284       <-- TCGGTGACACTTCAGACGGACCAGGGAGAAGAGGAGTTGTGTAGTGTGTA
FD553206       <-- TCGGTGACACTTCAGACGGACCAGGGAGAAGAGGAGTTGTGTAGTGTGTA
EV540022       <-- TCGGTGACACTTCAGACGGACCAGGGAGAAGAGGAGTTGTGTAGTGTTTA
FD966859       <-- TCGGTGACACTTCAGACGGACCAGGGAGAAGAGGAGTTGTGTAGTGTTTA
EV542224       <-- TCGGTGACACTTCAGACGGACCAGGGAGAAGAGGAGTTGTGTAGTGTGTA
FD953402       <-- TCGGTGACACTTCAGACGGACCAGGGAGAAGAGGAGTTGTGTAGTGTGTA
EV568253       --> TCGGTGACACTTCAGACGGACCAGGGAGAAGAGGAGTTGTGTAGTGTGTA
EV568560       --> ..................................................
FD970521       --> ..................................................
EW733183       --> TCGGTGACACTTCAGACGGACCAGGGAGAAGAGGAGTTGTGTAGTGTGTA
EY941521       --> ..................................................
FD957758       --> ..................................................
EX895967       --> ..................................................
FY433613       --> TCGGTGACACTTCAGACGGACCAGGGAGAAGAGGAGTTGTGTAGTGTGTA
FY442910       --> TCGGTGACACTTCAGACGGACCAGGGAGAAGAGGAGTTGTGTAGTGTGTA
FY451393       --> TCGGTGACACTTCAGACGGACCAGGGAGAAGAGGAGTTGTGTAGTGTGTA
EV535305       --> TCGGTGACACTTCAGACGGACCAGGGAGAAGAGGAGTTGTGTAGTGTTTA
EY924671       --> TCGGTGACACTTCAGACGGACCAGGGAGAAGAGGAGTTGTGTAGTGTGTA

               651    -    701
UN18977        --> TGTGCCTACGAATCATCTGTACATAGGAGATATATTTCTGGTGAACAGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737820       <-- TGTGCCTACGAATCATCTGTACATAGGAGATATATTTCTGGTGAACAGTG
EX899969       <-- TGTGCCTACGAATCATCTGTACATAGGAGATATATTTCTGGTGAACAGTG
EY920284       <-- TGTGCCTACGAATCATCTGTACATAGGAGATATATTTCTGGTGAACAGTG
FD553206       <-- TGTGCCTACGAATCATCTGTACATAGGAGATATATTTCTGGTGAACAGTG
EV540022       <-- TGTGCCTACGAATCATCTGTACATAGGAGATATATTTCTGGTGAACAGTG
FD966859       <-- TGTGCCTACGAATCATCTGTACATAGGAGATATATTTCTGGTGAACAGTG
EV542224       <-- TGTGCCTACGAATCATCTGTACATAGGAGATATATTTTTGGTGAACAGTG
FD953402       <-- TGTGCCTACGAATCATCTGTACATAGGAGATATATTTTTGGTGAACAGTG
EV568253       --> TGTGCCTACGAATCATCTGTACATAGGAGATATATTTCTGGTGAACAGTG
EV568560       --> ..................................................
FD970521       --> ..................................................
EW733183       --> TGTGCCTACGAATCATCTGTACATAGGAGATATATTTCTGGTGAACAGTG
EY941521       --> ..................................................
FD957758       --> ..................................................
EX895967       --> ..................................................
FY433613       --> TGTGCCTACGAATCATCTGTACATAGGAGATATATTTCTGGTGAACAGTG
FY442910       --> TGTGCCTACGAATCATCTGTACATAGGAGATATATTTCTGGTGAACAGTG
FY451393       --> TGTGCCTACGAATCATCTGTACATAGGAGATATATTTCTGGTGAACAGTG
EV535305       --> TGTGCCTACGAATCATCTGTACATAGGAGATATATTTCTGGTGAACAGTG
EY924671       --> TGTGCCTACGAATCATCTGTACATAGGAGATATATTTCTGGTGAACAGTG

               701    -    751
UN18977        --> AAGAAATCATTAGGCCAAATTTATCGATCCGAGAAGGAATAGAGATTATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737820       <-- AAGAAATCATTAGGCCGAATTTATCGATCCGAGAAGGAATAGAGATTATA
EX899969       <-- AGGAAATCATTAGGCCAAATTTATCGATCCGAGAAGGAATAGAGATTATA
EY920284       <-- AAGAAATCATTAGGCCAAATTTATCGATCCGAGAAGGAATAGAGATTATA
FD553206       <-- AAGAAATCATTAGGCCAAATTTATCGATCCGAGAAGGAATAGAGATTATA
EV540022       <-- AAGAAATCATTAGGCCAAATTTATCGATCCGAGAAGGAATAGAGATTATA
FD966859       <-- AAGAAATCATTAGGCCAAATTTATCGATCCGAGAAGGAATAGAGATTATA
EV542224       <-- AAGAAATCATTAGGCCAAATTTATCGATCCGAGAAGGAATAGAGATTATA
FD953402       <-- AAGAAATCATTAGGCCAAATTTATCGATCCGGGAAGGAATAGAGATTATA
EV568253       --> AAGAAATCA.........................................
EV568560       --> ..................................................
FD970521       --> ..................................................
EW733183       --> AAGAAATCATTACGCCGAATTTATCGATCCGAGAAGGAATAGAGATTATA
EY941521       --> ..................................................
FD957758       --> ..................................................
EX895967       --> ..................................................
FY433613       --> AAGAAATCATTAGGCCAAATTTATCGATCCGAGAAGGAATAGAGATTATA
FY442910       --> AAGAAATCATTAGGCCAAATTTATCGATCCGAGAAGGAATAGAGATTATA
FY451393       --> AAGAAATCATTAGGCCAAATTTATCGATCCGAGAAGGAATAGAGATTATA
EV535305       --> AAGAAATCATTAGGCCAAATTTATCGATCCGAGAAGGAATAGAGATTATA
EY924671       --> AAGAAATCATTAG-CCAAATTTATCGATCCG...................

               751    -    801
UN18977        --> GTATCGGTGGGGATGACGATGCCGCAAGTGATATCTCATGTGGACAGGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737820       <-- GTATCGGTGGGGATGACGATGCCGCAAGTGATATCTCATGTGGACAGGAC
EX899969       <-- GTATCGGTGGGGATGACGATGCCGCAAGTGATATCTCATGTGGACAGGAC
EY920284       <-- GTATCGGTGGGGATGACGATGCCGCAAGTGATATCTCATGTGGACAGGAC
FD553206       <-- GTATCGGTGGGGATGTCGATGCCGCAAGTGATATCTCATGTGGACAGGAC
EV540022       <-- GTATCGGTGGGGATGACGATGCCGCAAGTGATATCTCATGTGGACAGGAC
FD966859       <-- GTATCGGTGGGGATGACGATGCCGCAAGTGATATCTCATGTGGACAGGAC
EV542224       <-- GTATCGGTGGGGATGACGATGCCGCAAGTGATATCTCATGTGGACAGGAC
FD953402       <-- GTATCGGGGGGGATGACGATGCCGCAAGTGATATTTCATGTGGACAGGAC
EV568253       --> ..................................................
EV568560       --> ..................................................
FD970521       --> ..................................................
EW733183       --> GTATCGGTGGGGATGACGATGCCGCAAGTGATATCTCATGTGGACAGGAC
EY941521       --> ..................................................
FD957758       --> ..................................................
EX895967       --> ..................................................
FY433613       --> GTATCGGTGGGGATGACGATGCCGCAAGTGATATCTCATGTGGACAGGAC
FY442910       --> GTATCGGTGGGGATGACGATGCCGCAAGTGATATCTCATGTGGACAGGAC
FY451393       --> GTATCGGTGGGGATGACGATGCCGCAAGTGATATCTCATGTGGACAGGAC
EV535305       --> GTATCGGTGGGGATGACGATGCCGCAAGTGATATCTCATGT.........
EY924671       --> ..................................................

               801    -    851
UN18977        --> AAAGAGTAGAACTTCTCACCAACAAAGTCATAGGATTCC-TCTCAACAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737820       <-- AAAGAGTAGAACTTCTCACCAACAAAGTCATAGGATTCC-TCTCAACAGA
EX899969       <-- AAAGAGTAGAACTTCTCACCAACAAAGTCATAGGATTCC-TCTCAACAGA
EY920284       <-- AAAGAGTAGAACTTCTCACCAACAAAGTCATAGGATTCC-TCTCAACAGA
FD553206       <-- AAAGAGTAGAACTTCTCACCAACAAAGTCATAGGATTCC-TCTCAACAGA
EV540022       <-- AAAGAGTAGAACTTCTCACCAACAAAGTCATAGGATTCC-TCTCAACAGA
FD966859       <-- AAAGAGTAGAACTTCTCACCAACAAAGTCATAGGATTCC-TCTCAACAGA
EV542224       <-- AAAGAGTAGAACTTCTCACCAACAAAGTCATAGGATTCC-TCTCAACAGA
FD953402       <-- AAAGAGTAGAACTTCTCACCAACAAAGTCATAGGATTCC-TCTCAACATA
EV568253       --> ..................................................
EV568560       --> ..................................................
FD970521       --> ..................................................
EW733183       --> AAAGAGTAGAACTTCTCACCAACAAAGTCATAG-ATTCC-TCTCA-CAGA
EY941521       --> ..................................................
FD957758       --> ..................................................
EX895967       --> ..................................................
FY433613       --> AAAGAGTAGAACTTCTCACCAACAAAGTCATAGGATTCC-TCTCAACAGA
FY442910       --> AAAGAGTAGAACTTCTCACCAACAAAGTCATAGGATTCC-TCTCAACAGA
FY451393       --> AAAGAGTAGAACTTCTCACCAACAAAGTCATAGGATTCCCTCTCA-CAGA
EV535305       --> ..................................................
EY924671       --> ..................................................

               851    -    901
UN18977        --> CTTTGATTAATAGCTCTATTCATCTTGTAAAGATACTTCCCACACGTTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737820       <-- CTTTGATTAATAGCTCTATTCATCTTGTAAAGATACTTCCCACACGTTGT
EX899969       <-- CTTTGATTAATAGCTGTATTCATCTTGTAAAGATACTTCCCACACGTTGT
EY920284       <-- CTTTGATTAATAGCTCTATTCATCTTGTAAAGATACTTCCCACACGTTGT
FD553206       <-- CTTTGATTAATAGCTCTATTCATCTTGTAAAGATACTTCCCACACGTTGT
EV540022       <-- CTTTGATTAATAGCTCTATTCATCTTGTAAAGATACTTCCCACACGTTGT
FD966859       <-- CTTTGATTAATAGCTCTATTCATCTTGTAAAGATACTTCCCACACGTTGT
EV542224       <-- CTTTGATTAATAGCTCTATTCATCTTGTAAAGATACTTCCCACACGTTGT
FD953402       <-- CTTTGATTAATAGCTCTATTCATCTTGTAAAGATACTTCCCCCACGTTGT
EV568253       --> ..................................................
EV568560       --> ..................................................
FD970521       --> ..................................................
EW733183       --> CTTTGATTAATAGCTCTATTCATCTTGTAAAGA.................
EY941521       --> ..................................................
FD957758       --> ..................................................
EX895967       --> ..................................................
FY433613       --> CTTTGATTAATAGCTCTATTCA............................
FY442910       --> CTTTGATTAATAGCTCTATTCATCTTGTAAAGATACTTCCCACACGTTGT
FY451393       --> CTTTTGATAATAGCTCTATTCA............................
EV535305       --> ..................................................
EY924671       --> ..................................................

               901    -    951
UN18977        --> GCTCACTCAGGAATTATTACTATTACACTTGTTTTATCCGTAGTTTACTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737820       <-- GCTCACTCAGGAATTATCACTATTACACTTGTTTTATCCGTAGTTTACTA
EX899969       <-- GCTCACTCAGGAATTATTACTATTACACTTGTTTTATCCGTAGTTTAC..
EY920284       <-- GCTCACTCAGGAATTATTACTATTACACTTGTTTTATCCGTAGTTTACTA
FD553206       <-- GCTCACTCAGGAATTATTACTATTACACTTGTTTTATCCGTAGTTTACTA
EV540022       <-- GCTCACTCAGGAATTATTACTATTACACTTGTTTTATCCGTAGTTTACTA
FD966859       <-- GCTCACTCAGGAATTATTACTAATACACTTGTTTTATCCGTAGTTTACTA
EV542224       <-- GCTCACTCAGGAATTATTACTATTACACTTGTTTTATCCGTAGTTTACTA
FD953402       <-- GCTCACTCAGGAATTATTACTATTACACTTGTTTTATCCGTAGTTTAATA
EV568253       --> ..................................................
EV568560       --> ..................................................
FD970521       --> ..................................................
EW733183       --> ..................................................
EY941521       --> ..................................................
FD957758       --> ..................................................
EX895967       --> ..................................................
FY433613       --> ..................................................
FY442910       --> GCTCACTC..........................................
FY451393       --> ..................................................
EV535305       --> ..................................................
EY924671       --> ..................................................

               951    -   1001
UN18977        --> TGTTGCTCGGATTTGTATTATATTTCTTCAGTCATATTAAAATGCTAGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737820       <-- TGTTGCTCGGATTTGTATTAT.............................
EX899969       <-- ..................................................
EY920284       <-- TGTTGCTCGGATTTGTATTATATTTCTTCAGTCATATTAAAATGCTAGTA
FD553206       <-- TGTTGCTCGGATTTGTATTATATTTCTTCAGTCATATTAAAATGCTAGTC
EV540022       <-- TGTTGTTCGGATTTGTATTATATTTCTTCAGTCATATTAAAATGCTAATA
FD966859       <-- TGTTGTTCGGATTTGTATTATATTTCTTCAGTCATATTAAAATGCTAATA
EV542224       <-- TGTTGCTCGGATTTGTATTATATTTCTTCAGTCATATTAAAATataaaga
FD953402       <-- TGCTGCTCGG........................................
EV568253       --> ..................................................
EV568560       --> ..................................................
FD970521       --> ..................................................
EW733183       --> ..................................................
EY941521       --> ..................................................
FD957758       --> ..................................................
EX895967       --> ..................................................
FY433613       --> ..................................................
FY442910       --> ..................................................
FY451393       --> ..................................................
EV535305       --> ..................................................
EY924671       --> ..................................................

               1001   -   1051
UN18977        --> CCTTGAGGCACTATATCATACAAGACATCTTGAAACATAAAACTTGGATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737820       <-- ..................................................
EX899969       <-- ..................................................
EY920284       <-- CCTTGAGGCACTATATCATACAAGACATCTTG..................
FD553206       <-- CCTTGAGG..........................................
EV540022       <-- CCTTGAGGCACTATATCATACAAGACATCTTGAAACATAAAACTTGGATA
FD966859       <-- CCTTGAGGCACTATATCATACAAGACATCTTGAAACATAAAACTTGGATA
EV542224       <-- catcttgaaacat.....................................
FD953402       <-- ..................................................
EV568253       --> ..................................................
EV568560       --> ..................................................
FD970521       --> ..................................................
EW733183       --> ..................................................
EY941521       --> ..................................................
FD957758       --> ..................................................
EX895967       --> ..................................................
FY433613       --> ..................................................
FY442910       --> ..................................................
FY451393       --> ..................................................
EV535305       --> ..................................................
EY924671       --> ..................................................

               1051   -   1101
UN18977        --> TCCTCC
                   ~~~~~~
EW737820       <-- ......
EX899969       <-- ......
EY920284       <-- ......
FD553206       <-- ......
EV540022       <-- TCCTCC
FD966859       <-- TCCTCC
EV542224       <-- ......
FD953402       <-- ......
EV568253       --> ......
EV568560       --> ......
FD970521       --> ......
EW733183       --> ......
EY941521       --> ......
FD957758       --> ......
EX895967       --> ......
FY433613       --> ......
FY442910       --> ......
FY451393       --> ......
EV535305       --> ......
EY924671       --> ......