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Alignment for radish unigene UN18998

               1      -     51
UN18998        --> TTTTTCATCACATATTCCACCCACACTAACCAAACCATGAACCGTAATCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV541562       <-- .....CATCACATATTCCATCCACACTAACCAAACCATGAACCGTAATCA
EX907424       <-- ..................................................
FD977818       <-- ..................................................
EX886982       --> TTTTTCATCACATATTCCACCCACACTAACCAAACCATGAACCGTAATCA
EX903352       --> TTTTTCATCACATATTCCACCCACACTAACCAAACCATGAACCGTAATCA
EY908536       --> TTTTTCATCACATATTCCACCCACACTAACCAAACCATGAACCGTAATCA
FD570552       --> TTTTTCATCACATATTCCACCCACACTAACCAAACCATGAACCGTAATCA
EV537300       --> .....CATCACATATTCCATCCACACTAACCAAACCATGAACCGTAATCA
FD982218       --> ..................................................
FD562817       --> ..................................................
EW735508       --> ..................................................

               51     -    101
UN18998        --> TCACAAACCAATCCTAGTTACATTCTTCACTCTTCTTCTCCAACTTCCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV541562       <-- TCACAAACCAATCCTAGTTACATTCTTCACTCTTCTTCTCCAACTTCCAA
EX907424       <-- ..................................................
FD977818       <-- ..................................................
EX886982       --> TCACGAACCAATCCTACTTACATTCTTCACTCTTCTTCTCCAACTTCCAA
EX903352       --> TCACAAACCAATCCTACTTACATTCTTCACTCTTCTTCTCCAACTTCCAA
EY908536       --> TCACAAACCAATCCTAGTTACATTCTTCACTCTTCTTCTCCAACTTCCAA
FD570552       --> TCACGAACCAATCCTACTTACATTCTTCACTCTTCTTCTCCAACTTCCAA
EV537300       --> TCACAAACCAATCCTAGTTACATTCTTCACTCTTCTTCTCCAACTTCCAA
FD982218       --> ..................................................
FD562817       --> ..................................................
EW735508       --> ..................................................

               101    -    151
UN18998        --> ACCTTATCAATGCATCACCATCCCCACCCATAACGGCTCTTTACGCCTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV541562       <-- ACCTTATCAATCCATCACCATCCCCACCCATAACGGCTCTTTACGCCTTC
EX907424       <-- ..................................................
FD977818       <-- ..................................................
EX886982       --> ACTTTATCAATGCATCACCATCCCCACCCATAACGGCTCTTTACGCCTTC
EX903352       --> ACCTTATCAATGCATCACCATCCCCACCCATAACGGCTCTTTACGCCTTC
EY908536       --> ACCTTATCAATCCATCACCATCCCCACCCATAACGGCTCTTTACGCCTTC
FD570552       --> ACTTTATCAATGCATCACCATCCCCACCCATAACGGCTCTTTACGCCTTC
EV537300       --> ACCTTATCAATCCATCACCATCCCCACCCATAACGGCTCTTTACGCCTTC
FD982218       --> ...........................CCATAACGGCTCTTTACGCCTTC
FD562817       --> ............................ggTAACGGCTCTTTACGCCTTC
EW735508       --> ..................................................

               151    -    201
UN18998        --> GGCGACTCTACGGTGGATTCCGGCAACAACAACTACATCCCCACTCTTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV541562       <-- GGCGACTTTACGGTGGATTCCGGCAACAACAGCTACATCCCCACTCTTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX907424       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD977818       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX886982       --> GGCGACTCGACGGTGGATTCCGGCAACAACAACTACATCCCCACTCTTTT  Raphanus sativus var. oleiformis
EX903352       --> GGCGACTCTACGGTGGATTCCGGCAACAACAACTACATCCCCACTCTTTT  Raphanus sativus cv Rat-Tail Radish #3870
EY908536       --> GGCGACTCTACGGTGGATTCCGGCAACAACAACTACATCCCCACTCTTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD570552       --> GGCGACTCGACGGTGGATTCCGGCAACAACAACTACATCCCCACTCTTTT  Raphanus sativus cv Early Scarlet Globe
EV537300       --> GGCGACTCTACGGTGGATTCCGGCAACAACAGCTACATCCCCACTCTTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD982218       --> GGCGACTCTACGGTGGATTCCGGTAACAACAACTACATCCCCACTCTTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD562817       --> GGCGACTCGACGGTGGATTCCGGCAACAACAACTACATCCCCACTCTTTT  Raphanus sativus var. oleiformis
EW735508       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870

               201    -    251
UN18998        --> TCAAAGCAACCATCCACCCTACGGCAGATCTTTCCCGGATAAACTCTCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV541562       <-- TCAAAGCAACCATCCACCCTACGGCAGATCTTTCCCGGATAAACTCTCCA
EX907424       <-- ..................................................
FD977818       <-- ..................................................
EX886982       --> TCAAAGCAACCATCCACCCTACGGCAGATCTTTCCCGGATAAACTCTCCA
EX903352       --> TCAAAGCAACCATCCACCCTACGGCAGATCTTTCCCGGATAAACTCTCCA
EY908536       --> TCAAAGCAACCATCCACCCTACGGCAGATCTTTCCCGGATAAACTCTCCA
FD570552       --> TCAAAGCAACCATCCACCCTACGGCAGATCTTTCCCGGATAAACTCTCCA
EV537300       --> TCAAAGCAACCATCCACCCTACGGCAGATCTTTCCCGGATAAACTCTCCA
FD982218       --> TCAAAGCAACCATCCACCCTACGGCAGATCTTTCCCGGATAAACTCTCCA
FD562817       --> TCAAAGCAACCATCCACCCTACGGCAGATCTTTCCCGGATAAACTCTCCA
EW735508       --> ..................................................

               251    -    301
UN18998        --> CCGGAAGATTCTCAGATGGAAAACTCGCCACCGACTTTATAGCCTCTTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV541562       <-- CCGGAAGATTTTCAGATGGAAAACTCGCCACCGACTTTATAGCCTCTTCT
EX907424       <-- ..................................................
FD977818       <-- ..................................................
EX886982       --> CCGGAAGATTCTCAGATGGAAAACTCGCCACCGACTTTATAGCCTCTTCT
EX903352       --> CCGGAAGATTCTCAGATGGAAAACTCGCCACCGACTTTATAGCCTCTTCT
EY908536       --> CCGGAAGATTCTCAGATGGAAAACTCGCCACCGACTTTATAGCCTCTTCT
FD570552       --> CCGGAAGATTCTCAGATGGAAAACTCGCCACCGACTTTATAGCCTCTTCT
EV537300       --> CCGGAAGATTCTCAGATGGAAAACTCGCCACCGACTTTATAGCCTCTTCT
FD982218       --> CCGGAAGATTCTCAGATGGAAAACTCGCCACCGACTTTATAGCCTCTTCT
FD562817       --> CCGGAAGATTCTCAGATGGAAAACTCGCCACCGACTTTATAGCCTCTTCT
EW735508       --> .........................................GCCTCTTCT

               301    -    351
UN18998        --> CTAGGTCTCAAACCCACTTTACCAGCTTACCTCAACCCCTCGGTCAAACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV541562       <-- CTAGGTCTCAAACCCACTTTACCAGCTTACCTCAACCCCTCGGTCAAACC
EX907424       <-- ..................................................
FD977818       <-- ..................................................
EX886982       --> CTAGGTCTCAAACCCACTTTACCAGCTTACCTCAACCCCTCGGTCAAACC
EX903352       --> CTAGGTCTCAAACCTACTTTACCAGCTTACCTCAACCCCTCGGTCAAACC
EY908536       --> CTAGGTCTCAAACCCACTTTACCAGCTTACCTCAACCCCTCGGTCAAACC
FD570552       --> CTAGGTCTCAAACCCACTTTACCAGCTTACCTCAACCCCTCGGTCAAACC
EV537300       --> CTAGGTCTCAAACCCACTTTACCAGCTTACCTCAACCCCTCGGTCAAACC
FD982218       --> CTAGGTCTCAAACCTACTTTACCAGCTTACCTCAACCCCCCGGTCAAACC
FD562817       --> CTAGGTCTCAAACCCACTTTACCAGCTTACCTCAACCCCTCGGTCAAACC
EW735508       --> CTAGGTCTCAAACCCACTTTACCAGCTTACCTCAACCCCTCGGTCAAACC

               351    -    401
UN18998        --> GGCTGACCTTTTGACCGGTGTTAGCTTTGCTTCGGCTGGAGGTGGTCTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV541562       <-- GGCTGACCTTTTGACCGGTGTTAGCTTTGCTTCAGCTGGAGGTGGTCTAG
EX907424       <-- .............................ttgctcgccggaGTGGTCTAG
FD977818       <-- ..................................................
EX886982       --> GGCTGACCTTTTGACCGGTGTTAGCTTTGCTTCGGCTGGAGGTGGTCTAG
EX903352       --> GGCTGACCTTTTGACCGGTGTTAGCTTTGCTTCGGCCGGAGGTGGTCTAG
EY908536       --> GGCTGACCTTTTGACCGGTGTTAGCTTTGCTTCAGCTGGAGGTGGTCTAG
FD570552       --> GGCTGACCTTTTGACCGGTGTTAGCTTTGCTTCGGCTGGAGGTGGTCTAG
EV537300       --> GGCTGACCTTTTGACCGGTGTTAGCTTTGCTTCAGCTGGAGGTGGTCTAG
FD982218       --> GGCTGACCTTTTGACCGGTGTTAGCTTTGCTTCGGCCGGAGGTGGTCTAG
FD562817       --> GGCTGACCTTTTGACCGGTGTTAGCTTTGCTTCGGCTGGAGGTGGTCTAG
EW735508       --> GGCTGACCTTTTGACCGGTGTTAGCTTTGCTTCGGCTGGAGGTGGTCTAG

               401    -    451
UN18998        --> ATGACCGGACTGCAATGATGTCGTTGACTTTGACCATGGACAATCAATGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV541562       <-- ATGACCGGACTGCAATGATGTCGTTGACTTTGACCACGGACAAGCAATGG
EX907424       <-- ATGACCGGACTGCAATGATGTCGT-GACTT-GACCATG-ACAATCAATGG
FD977818       <-- ..................................................
EX886982       --> ATGACCGGACTGCAATGATGTCGTTGACTTTGACCATGGACAATCAATGG
EX903352       --> ATGACCGGACTGCAATGATGTCGTTGACTTTGACCATGGACAATCAATGG
EY908536       --> ATGACCGGACTGCAATGATGTCGTTGACTTTGACCATGGACAAGCAATGG
FD570552       --> ATGACCGGACTGCAATGATGTCGTTGACTTTGACCATGGACAATCAATGG
EV537300       --> ATGACCGGACTGCAATGATGTCGTTGACTTTGACCACGGACAAGCAATGG
FD982218       --> ATGACCGGACTGCAATGATGTCGTTGACTTTGACCATGGACAATCAATGG
FD562817       --> ATGACCGGACTGCAATGATGTCGTTGACTTTGACCATGGACAATCAATGG
EW735508       --> ATGACCGGACTGCAATGATGTCGTTGACTTTGACCATGGACAATCAATGG

               451    -    501
UN18998        --> AGTTACTTTGAGGAGGCTGTACGTAAGATGAAGAGTGTGGTTGGAGATTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV541562       <-- AGTTATTTTGAGGAGGCTGTACGTAAGATGAAGAGTGTGGTTGGAGATTC
EX907424       <-- AGT-ACTTTGAG-AGGCTGTACGTAAGATGAAGAGTGTGGTTGGAGATTC
FD977818       <-- .........................................TGGAGATTC
EX886982       --> AGTTACTTTGAGGAGGCTGTACGTAAGATGAAGAGTGTGGTTGGAGATTC
EX903352       --> AGTTACTTTGAGGAGGCTGTACGTAAGATGAAGAGTGTGGTTGGAGATTC
EY908536       --> AGTTATTTTGAGGAGGCTGTACGTAAGATGAAGAGTGTGGTTGGAGATTC
FD570552       --> AGTTACTTTGAGGAGGCTGTACGTAAGATGAAGAGTGTGGTTGGAGATTC
EV537300       --> AGTTATTTTGAGGAGGCTGTACGTAAGATGAAGAGTGTGGTTGGAGATTC
FD982218       --> AGTTACTTTGAGGAGGCTGTACGTAAGATGAATAGTGTGGTTGGAGATTC
FD562817       --> AGTTACTTTGAGGAGGCTGTACGTAAGATGAAGAGTGTGGTTGGAGATTC
EW735508       --> AGTTACTTTGAGGAGGCTGTACGTAAGATGAAGAGTGTGGTTGGAGATTC

               501    -    551
UN18998        --> GGAGACTAATCGGGTGATTAAGAATGCTTTGTTTGTGATTAGTGCTGGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV541562       <-- GGAGACTAATCGGGTGATTAAGAATGCTTTGTTTGTGATTAGTGCTGGGA
EX907424       <-- GGAGACTAATCGGGTGATTAAGAATGCTTTGTTTGTGATTAGTGCTGGGA
FD977818       <-- GGAGACTAATCGGGTGATTAAGAATGCTTTGTTTGTGATTAGTGCTGGGA
EX886982       --> GGAGACTAGTCGGGTGATTAAGAATGCTTTGTTTGTGATTAGTGCTGGGA
EX903352       --> GGAGACTAATCGGGTGATTAAGAATGCTTTGTTTGTGATTAGTGCTGGGA
EY908536       --> GGAGACTAATCGGGTGATTAAGAATGCTTTGTTTGTGATTAGTGCTGGGA
FD570552       --> GGAGACTAATCGGGTGATTAAGAATGCTTTGTTTGTGATTAGTGCTGGGA
EV537300       --> GGAGACTAATCGGGTGATTAAGAATGCTTTGTTTGTGATTAGTGCTGGGA
FD982218       --> GGAGACTAATCGGGTGATTAAGAATGCTTTGTTTGTGATTAGTGCTGGGA
FD562817       --> GGAGACTAATCGGGTGATTAAGAATGCTCTGTTTGTGATTAGTGCTGGGA
EW735508       --> GGAGACTAATCGGGTGATTAAGAATGCTTTGTTTGTGATTAGTGCTGGGA

               551    -    601
UN18998        --> CTAATGATATGATCTATAATGTTTATGATCATGTTCTTGGGAGCTTTATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV541562       <-- CTAATGATATGATCTATAATGTTTATGATCATGTTCTTGGGAGCTTAATT
EX907424       <-- CTAATGATATGATCTATAATGTTTATGATCATGTTCTTGGGAGCTTTATT
FD977818       <-- CTAATGATATGATCTATAATGTTTATGATCATGTTCTTGGGAGCTTTATT
EX886982       --> CTAATGATATGATCTATAATGTTTATGATCATGTTCTTGGGAGCTTTATT
EX903352       --> CTAATGATATGATCTATAATGTTTATGATCATGTTCTTGGGAGCTTTATT
EY908536       --> CTAATGATATGATCTATAATGTTTATGATCATGTTCTTGGGAGCTTAATT
FD570552       --> CTAATGATATGATCTATAATGTTTATGATCATGTTCTTGGGAGCTTTATT
EV537300       --> CTAATGATATGATCTATAATGTTTATGATCATGTTCTTGGGAGCTTAATT
FD982218       --> CTAATGATATGATCTATAATGTTTATGATCATGTTCTTGGGAGCTTTATT
FD562817       --> CTAATGATATGATCTATAATGTTTATGATCATGTTCTTGGGAGCTTTATT
EW735508       --> CTAATGATATGATCTATAATGTTTATGATCATGTTCTTGGGAGCTTTATT

               601    -    651
UN18998        --> TCCGTTTCGGACTATCAAGATTATCTACTCAGCAAAGTCGAAGCGTTTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV541562       <-- TCCGTTTCGGACT.....................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX907424       <-- TCCGTTTCCGACTATCAAGATTATCTACTCAGCAAAGTCGAAGCGTTTAT  Raphanus sativus cv Rat-Tail Radish #3870
FD977818       <-- TCCGTTTCCGACTATCAAGATTATCTACTCAGCAAAGTCGAAGCGTTTAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX886982       --> TCCGTTTCGGACTATCAAGATTATCTACTCAGCAAAGTCGAAGCGTTTAT  Raphanus sativus var. oleiformis
EX903352       --> TCCGTTTCCGACTATCAAGATTATCTACTCAGCAAAGTCGAAGCGTTTAT  Raphanus sativus cv Rat-Tail Radish #3870
EY908536       --> TCCGTTTCGGACTATCAAGATTATCTACTCAGCAAAGTCGAAGCGTTTAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD570552       --> TCCGTTTCGGACTATCAAGATTATCTACTCAGCAAAGTCGAAGCGTTTAT  Raphanus sativus cv Early Scarlet Globe
EV537300       --> TCCGTTTCGGACT.....................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD982218       --> TCCGTTTCCGACTATCAAGATTATCTACTCAGCAAAGTCGAAGCGTTTAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD562817       --> TCCGTTTCGGACTATCAAGATTATCTACTCAGCAAAGTCGAAGCGTTTAT  Raphanus sativus var. oleiformis
EW735508       --> TCCGTTTCGGACTATCAAGATTATCTAC......................  Raphanus sativus cv Rat-Tail Radish #3870

               651    -    701
UN18998        --> CCAGAGACTACACGACGCAG-AGCACGAAGGATTACAGTAGCTGGACTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV541562       <-- ..................................................
EX907424       <-- CCAGAGACTACACGACGCAGGAGCACGAAGGATTACAGTAGCTGGACTAC
FD977818       <-- CCAGAGACTACACGACGCAGGAGCACGAAGGATTACAGTAGCTGGACTAC
EX886982       --> CCAGAGACTACACGACGCAG-AGCACGAAG-ATTACAGTAGCTGGACTAC
EX903352       --> CCAGAGACTACACGACGCAG-AGCACGAACGATTACAGTAGCTGGACTAC
EY908536       --> CCAGAGACTACACGAC..................................
FD570552       --> CCAGAGACTACACGACGCAG-AGCACGAAG-ATTACAGTAGCTGGACTAC
EV537300       --> ..................................................
FD982218       --> CCAGAGACTACACGACGCAG-AGCACGAAGGATTACAGTAGCTGGACTAC
FD562817       --> CCAGAGACTACACGACGCAGGAGCACGAAGGATTACAGTAGCTGGACTAC
EW735508       --> ..................................................

               701    -    751
UN18998        --> CACCAATTGGATGCCTTCCGGTGCAAGTAACACTTGGTACCGTCACTATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV541562       <-- ..................................................
EX907424       <-- CACCAATTGGATGCCTTCCGGTGCAAGTAACACTTGGTACCGTCACTATC
FD977818       <-- CACCAATTGGATGCCTTCCGGTGCAAGTAACACTTGGTACCGTCACTATC
EX886982       --> CACCAATTGGATGCCTCCCG-TGCAAGTAACACTTGGTACCGTCAC....
EX903352       --> -ACCAATTGGATGC-TTCCG-TGC-AGT-ACACTTGGTACCGTCACTATC
EY908536       --> ..................................................
FD570552       --> CACCAATTGGATGCCTTCCGGTGCA-GTAACACTTGGTAC-GTCACTATC
EV537300       --> ..................................................
FD982218       --> -ACCAATTGGATGCCTCCCG-TGC-AGTAACACTTGGTACCGTCAC....
FD562817       --> CACCAATTGGATGCCTTCCGGTGCAAGTAACACTTGGTACCGTCACTATC
EW735508       --> ..................................................

               751    -    801
UN18998        --> CCTCGCATTCTCCATCATCGGATATGCACGGAAAATCAAAACGCTGATTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV541562       <-- ..................................................
EX907424       <-- CCTCGCATTCTCCATCATCGGATATGCACGGAAAATCAAAACGCTGATTC
FD977818       <-- CCTCGCATTCTCCATCATCGGATATGCACGGAAAATCAAAACGCTGATTC
EX886982       --> ..................................................
EX903352       --> CCTCGCAT-CT-CATCATCGGATATGCACGGAAA-TCAAA-CGCTGAT-C
EY908536       --> ..................................................
FD570552       --> CCTCGCAT-CT-CATCATCGGATATGCACGGAAA-TCAAA-CGCTGAT-C
EV537300       --> ..................................................
FD982218       --> ..................................................
FD562817       --> CCTCGCATTCTCCATCATCGGATATGCACGGAAAATCAAAACGCTGATTC
EW735508       --> ..................................................

               801    -    851
UN18998        --> TCAGCTCTACAATCAAAAGCTACGGAAGCTTAACTACCGTCTCAGTCAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV541562       <-- ..................................................
EX907424       <-- TCAGCTCTACAATCAAAAGCTACGGAAGCTTAACTACCGTCTCAGTCAGA
FD977818       <-- TCAGCTCTACAATCAAAAGCTACGGAAGCTTAACTACCGTCTCAGTCAGA
EX886982       --> ..................................................
EX903352       --> TCAGCTCTACAtc.....................................
EY908536       --> ..................................................
FD570552       --> TCAGCTCTACA-TCAAA-GCTACGGA-GCTTA-CTACCGTCTCAGT....
EV537300       --> ..................................................
FD982218       --> ..................................................
FD562817       --> TCAGCTCTACAATCAAAAGCTACGGAAGCTTAACTACCGTCTCAGTCAGA
EW735508       --> ..................................................

               851    -    901
UN18998        --> GGCTTCCAGGCTCGAAAATTCTTTACCTTGACATCTACACTCCATTAATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV541562       <-- ..................................................
EX907424       <-- GGCTTCCAGGCTCGAAAATTCTTTACCTTGACATCTACACTCCATTAATA
FD977818       <-- GGCTTCCAGGCTCGAAAATTCTTTACCTTGACATCTACACTCCATTAATA
EX886982       --> ..................................................
EX903352       --> ..................................................
EY908536       --> ..................................................
FD570552       --> ..................................................
EV537300       --> ..................................................
FD982218       --> ..................................................
FD562817       --> GGCTTCCAGGCTCGAAA--TC-TTACCTTGACATCTACACTCCAT--ATA
EW735508       --> ..................................................

               901    -    951
UN18998        --> GACATGATCAGACATCCTCCCAGATATGGATTGGAAGAAACATTGAAAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV541562       <-- ..................................................
EX907424       <-- GACATGATCAGACATCCTCCCAGATATGGATTGGAAGAAACATTGAAAGG
FD977818       <-- GACATGATCAGACATCCTCCCAGATATGGATTGGAAGAAACATTGAAAGG
EX886982       --> ..................................................
EX903352       --> ..................................................
EY908536       --> ..................................................
FD570552       --> ..................................................
EV537300       --> ..................................................
FD982218       --> ..................................................
FD562817       --> GACATGATCAGACATCCTCCCAGATATG......................
EW735508       --> ..................................................

               951    -   1001
UN18998        --> GTGTTGCGGGACGGGGCTGCTTGAGGCGGGACCTCTATGCAAGCCATTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV541562       <-- ..................................................
EX907424       <-- GTGTTGCGGGACGGGGCTGCTTGAGGCGGGACCTCTATGCAAGCCATTGT
FD977818       <-- GTGTTGCGGGACGGGGCTGCTTGAGGCGGGACCTCTATGCAAGCCATTGT
EX886982       --> ..................................................
EX903352       --> ..................................................
EY908536       --> ..................................................
FD570552       --> ..................................................
EV537300       --> ..................................................
FD982218       --> ..................................................
FD562817       --> ..................................................
EW735508       --> ..................................................

               1001   -   1051
UN18998        --> CTCGGACTTGTGAGGATGTTTCAAAGTACATGTTCTTTGATTCTGTGCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV541562       <-- ..................................................
EX907424       <-- CTCGGACTTGTGAGGATGTTTCAAAGTACATGTTCTTTGATTCTGTGCAT
FD977818       <-- CTCGGACTTGTGAGGATGTTTCAAAGTACATGTTCTTTGATTCTGTGCAT
EX886982       --> ..................................................
EX903352       --> ..................................................
EY908536       --> ..................................................
FD570552       --> ..................................................
EV537300       --> ..................................................
FD982218       --> ..................................................
FD562817       --> ..................................................
EW735508       --> ..................................................

               1051   -   1101
UN18998        --> CCATCACAAAAGGCGTACTCTGTCATAGCATCTTACGCCTTACAAAAGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV541562       <-- ..................................................
EX907424       <-- CCATCACAAAAGGCGTACTCTGTCATAGCATCTTACGCCTTACAAAAGTT
FD977818       <-- CCATCACAAAAGGCGTACTCTGTCATAGCATCTTACGCCTTACAAAAGTT
EX886982       --> ..................................................
EX903352       --> ..................................................
EY908536       --> ..................................................
FD570552       --> ..................................................
EV537300       --> ..................................................
FD982218       --> ..................................................
FD562817       --> ..................................................
EW735508       --> ..................................................

               1101   -   1151
UN18998        --> GTTCCCTCTCCTCTAATCTATTTATTTTTATCATTTGCGGATTTAAATTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV541562       <-- ..................................................
EX907424       <-- GTTCCCTCTCCTCTAATCTATTTATTTTTATCATTTGCGGATTTAAATTT
FD977818       <-- GTTCCCTCTCCTCTAATCTATTTATTTTTATCATTTGCGGATTTAAATTT
EX886982       --> ..................................................
EX903352       --> ..................................................
EY908536       --> ..................................................
FD570552       --> ..................................................
EV537300       --> ..................................................
FD982218       --> ..................................................
FD562817       --> ..................................................
EW735508       --> ..................................................

               1151   -   1201
UN18998        --> TAATGTTGTAACTAAATATGGGCAGCATCAAACATTGTCTCCACATCATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV541562       <-- ..................................................
EX907424       <-- TAATGTTGTAACTAAATATGGGCAGCATCAAACATTGTCTCCACATCATT
FD977818       <-- TAATGTTGTAACTAAATATGGGCAGCATCAAACATTGTCTCCACATCATT
EX886982       --> ..................................................
EX903352       --> ..................................................
EY908536       --> ..................................................
FD570552       --> ..................................................
EV537300       --> ..................................................
FD982218       --> ..................................................
FD562817       --> ..................................................
EW735508       --> ..................................................

               1201   -   1251
UN18998        --> CTTATTCAGAGTGTCAAATTGATGTAACCTTTATTTTGGTAAAAGATTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV541562       <-- ..................................................
EX907424       <-- CTTATTCAGAGTGTCAAATTGATGTAACCTTTATTTTGGTAAAAGATT..
FD977818       <-- CTTATTCAGAGTGTCAAATTGATGTAACCTTTATTTTGGTAAAAGATTAT
EX886982       --> ..................................................
EX903352       --> ..................................................
EY908536       --> ..................................................
FD570552       --> ..................................................
EV537300       --> ..................................................
FD982218       --> ..................................................
FD562817       --> ..................................................
EW735508       --> ..................................................

               1251   -   1301
UN18998        --> GGTTACGCCAC
                   ~~~~~~~~~~~
EV541562       <-- ...........
EX907424       <-- ...........
FD977818       <-- GGTTACGCCAC
EX886982       --> ...........
EX903352       --> ...........
EY908536       --> ...........
FD570552       --> ...........
EV537300       --> ...........
FD982218       --> ...........
FD562817       --> ...........
EW735508       --> ...........