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Alignment for radish unigene UN19159

               1      -     51
UN19159        --> CAATTCAACTAGTTCCTCTCTTTCTGCAAATTTGCACACCAATTTCATAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567807       <-- ..................................................
EX770737       <-- ..................................................
FD962635       <-- ..................................................
EX771708       <-- ..................................................
EY925177       <-- ..................................................
EX775821       --> CAATTCAACTAGTTCCTCTCTTTCTGCAAATTTGCACACCAATTTCATAT
FD581388       --> .AATTCAACTAGTTCCTCTCTTTCTGCAAATTTGCACACCAATTTCATAT
FD959140       --> .........................GCAAATTTGCACACCAATTTCATAT
EV572667       --> ..................................................
EY920711       --> ..................................................
EY944419       --> ..................................................
EX774886       --> ..................................................
EY895924       --> ..................................................

               51     -    101
UN19159        --> TTGTGCATAGTCAAAGACATGCTTAAAACCAAGACTAGCAAAACCAATGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567807       <-- ..................................................
EX770737       <-- ..................................................
FD962635       <-- ..................................................
EX771708       <-- ..................................................
EY925177       <-- ..................................................
EX775821       --> TTGTGCATAGTCAAAGACATGCTTAAAACCAAGACTAGCAAAACCAATGT
FD581388       --> T-GTGCATAGTCAAAGACATGCTTAAAACCAAGACTAGCAAAACCAATGT
FD959140       --> TTGTGCATAGTCAAAGACATGCTTAAAACCAAGACTAGCAAAACCAATGT
EV572667       --> .TGTGCATAGTCAAAGGCATGCTTAAAACCAAGACTAGCAAAACCAATGT
EY920711       --> ..GTGCATAGTCAAAGACATGCTTAAAACCAAGACTAGCAAAACCAATGT
EY944419       --> ..GTGCATAGTCAAAGACATGCTTAAAACCAAGACTAGCAAAACCAATGT
EX774886       --> .....CATAGTCAAAGACATGCTTAAAACCAAGACTAGCAAAACCAATGT
EY895924       --> ...............GACATGCTTAAAGCCAAGACTAGCAAAACCAATGT

               101    -    151
UN19159        --> ACAAGTGATCCCTCATGAGAGAAACTGCTGGCAAAACATATTATTCTCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567807       <-- ..................................................
EX770737       <-- ..................................................
FD962635       <-- ..................................................
EX771708       <-- ..................................................
EY925177       <-- ..................................................
EX775821       --> ACAAGTGATCCCTCATGAGAGAAACTGCTGGCAAAACATATTATTCTCAA
FD581388       --> ACAAGTGATCCCTCATGAGAGAAACTGCTGGCAAAACACATTATTCTCAA
FD959140       --> ACAAGTGATCCCTCATGAGAGAAACTGCTGGCAAAACATATTATTCTCAA
EV572667       --> ACAAGTGATCCCTCATGAGAGAAACTGCTGGCAAAACATATTATTCTCAA
EY920711       --> ACAAGTGATCCCTCATGAGAGAAACTGCTGGCAAAACATATTATTCTCAA
EY944419       --> ACAAGTGATCCCTCATGAGAGAAACTGCTGGCAAAACACATTATTCTCAA
EX774886       --> ACAAGTGATCCCTCATGAAAGAAACTGCTGGCAAAACATATTATTCTCAA
EY895924       --> ACAAGTGATCCCTCATGAGAGAAACTGCTGGCAAAACATATTATTCTCAA

               151    -    201
UN19159        --> AGAAACAAAAACAAAAACTCTTAGGGACTTGTAGCAAGCTTGTTGAAGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567807       <-- .......................GGGACTTGTAGCAAGCTTGTTGAAGGC
EX770737       <-- ..........................tctaggactgtagcagctgtgaag
FD962635       <-- ..................................................
EX771708       <-- ..................................................
EY925177       <-- ..................................................
EX775821       --> AGAAACAAAAACAAAAACTCTTAGGGACTTGTAGCAAGCTTGTTGAAGGC
FD581388       --> AGAAACAAAAACAAAAACTCTTAGGGACTTGTAGCAAACTTGTTGAAGGC
FD959140       --> AGAAACAAAAACAAAAACTCTTAGGGACTTGTAGCAAGCTTGTTGAAGGC
EV572667       --> AGAAACAAAAACAAAAACTCTTAGGGACTTGTAGCAAGCTTGTTGAAGGC
EY920711       --> AGAAACAAAAACAAAAACTCTTAGGGACTTGTAGCAAGCTTGTTGAAGGC
EY944419       --> AGAAACAAAAACAAAAACTCTTAGGGACTTGTAGCAAGCTTGTTGAAGGC
EX774886       --> AGAAACAAAAACAAAAACTCTTAGGGACTTGTAGCAAGCTTGTTGAAGGC
EY895924       --> AGAAACAAAAACAAAAACTCTTAGGGACTTGTAGCAAGCTTGTTGAAGGC

               201    -    251
UN19159        --> GGCGTGAACTCTCTCTTCAGTGAACATTCTGTGGTTCTCATAGAAATCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567807       <-- GGCGTGAACTCTCTCTTCAGTGAACATTCTGTGGTTTTCATAGAAATCTA
EX770737       <-- cGCGTG-ACTCTCTCTTCAGTGAACATTCTGTGGTTCTCATAGAAATCTA
FD962635       <-- ..........ccCTCTTCAGTGA-CA-TCTGTGGT-CTCATAGAAATCTA
EX771708       <-- ........................CATTCTGTGGTTCTCATAGAAATCTA
EY925177       <-- ..................................................
EX775821       --> GGCGTGAACTCTCTCTTCAGTGAACATTCTGTGGTTCTCATAAAAATCTA
FD581388       --> GGCGTGAACTCTCTCTTCAGTGAACATTCTGTGGTTCTCATAGAAATCTA
FD959140       --> GGCGTGAACTCCCTCTTCAGTGAACATTCTGTGGTTCTCATAGAAATCTA
EV572667       --> GGCGTGAACTCTCTCTTCAGTGAACATTCTGTGGTTTTCATAGAAATCTA
EY920711       --> GGCGTGAACTCTCTCTTCAGTGAACATTCTGTGGTTCTCATAGAAATCTA
EY944419       --> GGCGTGAACTCTCTCTTCAGTGAACATTCTGTGGTTCTCATAGAAATCTA
EX774886       --> GGCGTGAACTCTCTCTTCAGTGAACATTCTGTGGTTCTCATAAAAATCTA
EY895924       --> GGCGTGAACTCTCTCTTCAGTGAACATTCTGTGGTTCTCATAGAAATCTA

               251    -    301
UN19159        --> ATATCTCCATTGCGATATTCTTCACAATGTTCATGTCCACAGAGAGCTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567807       <-- ATATCTCCATTGCGATATTCTTCACAATGTTCATGTCCACAGAGAGCTCT
EX770737       <-- ATATCTCCATTGCGATATTCTTCACAATGTTCATGTCCACAGAGAGCTCT
FD962635       <-- ATATCTCCATTGCGATAT-C-TCACAATGT-CATGTCCACAGAGAGCTCT
EX771708       <-- -TATCTCCATTGCGATAT-CTTCACAATGTTCATGTCCACAGAGAGCTCT
EY925177       <-- ..................................................
EX775821       --> ATATCTCCATTGCGATATTCTTCACAATGTTCATGTCCACAGAGAGCTCT
FD581388       --> ATATCTCCATTGCGATATTCTTCACAATGTTCATGTCCACAGAGAGCTCT
FD959140       --> ATATCTCCATTGCGATATTCTTCACAATGTTCATGTCCACAGAGAGCTCT
EV572667       --> ATATCTCCATTGCGATATTCTTCACAATGTTCATGTCCACAGAGAGCTCT
EY920711       --> ATATCTCCATTGCGATATTCTTCACAATGTTCATGTCCACAGAGAGCTCT
EY944419       --> ATATCTCCATTGCGATATTCTTCACAATGTTCATGTCCACAGAGAGCCCT
EX774886       --> ATATCTCCATTGCGATATTCTTCACAATGTTCATGTCCACAGAGAGCTCT
EY895924       --> ATATCTCCATTGCGATATTCTTCACAATGTTCATGTCCACAGAGAGCTCT

               301    -    351
UN19159        --> TCAAACCATGTCTTTATGTCTTTCTCTTTGTAAACAGAAGCAACGTAAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567807       <-- TCAAACCATGTCTTTATGTCTTTCTCTTTGTAAACAGAAGCAACGTAAAT
EX770737       <-- TCAAACCATGTCTTTATGTCTTTCTCTTTGTACACAGAAGCAACGTAAAT
FD962635       <-- TCAAACCATGTCTTTATGTCTTTCTCTTTGTACACAGAAGCAACGTAAAT
EX771708       <-- TCAAACCATGTCTTTATGTCTTTCTCTTTGTACACAGAAGCAACGTAAAT
EY925177       <-- ......................TCTCTTTGTAAACAGAAGCAACGTAAAT
EX775821       --> TCAAACCATGTCTTTATGTCTTTCTCTTTGTACACAGAAGCAACGTAAAT
FD581388       --> TCAAACCATGTCTTTATGTCTTTCTCTTTGTAAACAGAAGCAACGTAAAT
FD959140       --> TCAAACCATGTCTTTATGTCTTTCTCTTTGTACACAGAAGCAACGTAAAT
EV572667       --> TCAAACCATGTCTTTATGTCTTTCTCTTTGTAAACAGAAGCAACGTAAAT
EY920711       --> TCAAACCATGTCTTTATGTCTTTCTCTTTGTAAACAGAAGCAACGTAAAT
EY944419       --> TCAAACCATGTCTTTATGTCTTTCTCTTTGTAAACAGAAGCAACGTAAAT
EX774886       --> TCAAACCATGTCTTTATGTCTTTCTCTTTGTACACAGAAGCAACGTAAAT
EY895924       --> TCAAACCATGTCTTTATGTCTTTCTCTTTGTAAACAGAAGCAACGTAAAT

               351    -    401
UN19159        --> GCAAGCGAGGGTGATGAGATAAGGCGGGTGTGTAAGGATGAGATCCATTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567807       <-- GCAAGCGAGGGTGATGAGATAAGGCGGGTGTGTAAGGATGAGATCCATTC
EX770737       <-- GCAAGCGAGGGTGATGAGATAGGGCGGGTGTGTAAGGA-GAGATCCATTC
FD962635       <-- GCAAGCGAGGGTGATGAGATAAGGCGGGTGTGTAAGGATGAGATCCATTC
EX771708       <-- GCAAGCGAGGGTGATGAGATAGGGCGGGTGTGTAAGGA-GAGATCCATTC
EY925177       <-- GCAAGCGAGGGTGATGAGATAAGGCGGGTGTGTAAGGATGAGATCCATTT
EX775821       --> GCAAGCGAGGGTGATGAGATAGGGCGGGTGTGTAAGGA-GAGATCCATTC
FD581388       --> GCAAGCAAGGGTGATGAGATAAGGCGGATGCGTAAGGATGAGGTACATTC
FD959140       --> GCAAGCGAGGGTGATGAGATAAGGCGGGTGTGTAAGGATGAGATCCATTC
EV572667       --> GCAAGCGAGGGTGATGAGATAAGGCGGGTGTGTAAGGATGAGATCCATTC
EY920711       --> GCAAGCGAGGGTGATGAGATAAGGCGGGTGTGTAAGGATGAGATCCATTT
EY944419       --> GCAAGCGAGGGTGATGAGATAAGGCGGATGCGTAAGGATGAGGTCCATTC
EX774886       --> GCAAGCGAGGGTGATGAAATAGGGCGGGTGTGTAAGGA-GAGATCCATTC
EY895924       --> GCAAGCGAGGGTGATGAGATAAGGCGGGTGTGTAAGGATGAGATCCATTC

               401    -    451
UN19159        --> TGTAAGTGTCGTTGACAATACCCCAAGTTAAGTGGGTCATACTTGTGTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567807       <-- TGTAAGTGTCGTTGACAATACCCCAAGTTAAGTGGGTCATACTTGTGTCA
EX770737       <-- TGTAAGTGTCGTTGACAATACCCCAAGTTAAGTGGGTCATACTTGTGTCA
FD962635       <-- TGTAAGTGTCGTTGACAATACCCCAAGTTAAGTGGGTCATGCTTGTGTCA
EX771708       <-- TGTAAGTGTCGTTGACAATACCCCAAGTTAAGTGGGTCATACTTGTGTCA
EY925177       <-- TGTAAGTGTCGTTGACAATACCCCAAGTTAAGTGGGTCATACTTGTGTCA
EX775821       --> TGTAAGTGTCGTTGACAATACCCCAAGTTAAGTGGGTCATACTTGTGTCA
FD581388       --> TGTAAGTGTCGTTGACAATACCCCAAGTTAAGTGGGTCATACTTGTGTCA
FD959140       --> TGTAAGTGTCGTTGACAATACCCCAAGTTAAGTGGGTCATGCTTGTGTCA
EV572667       --> TGTAAGTGTCGTTGACAATACCCCAAGTTAAGTGGGTCATACTTGTGTCA
EY920711       --> TGTAAGTGTCGTTGACAATACCCCAAGTTAAGTGGGTCATACTTGTGTCA
EY944419       --> TGTAAGTGTCGTTGACAATACCCCAAGTTAAGTGGGTCATACTTGTGTCA
EX774886       --> TGTAAGTGTCGTTGACAATACCCCAAGTTAAGTGGGTCATACTTGTGTCA
EY895924       --> TGTAAGTGTCGTTGACAATACCCCAAGTTAAGTGGGTCATACTTGTGTCA

               451    -    501
UN19159        --> TTGAGTCCAGAATCCTGCAAGAACTCGGGGAGAGATCGGTAAGGGTGGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567807       <-- TTGAGTCCAGAATCCTGCAAGAACTCGGGGAGAGATCGGTAAGGGTGGAA  Raphanus raphanistrum subsp. landra
EX770737       <-- TTGAGTCCAGAATCCTGCAAGAACTCGGGGAGAGATCGGTAAGGGTGGAA  Raphanus raphanistrum subsp. landra
FD962635       <-- TGGAGTCCAGAATCCTGCAAGAACTCAGGGAGAGATCGGTATGGGTGGAA  Raphanus raphanistrum subsp. maritimus
EX771708       <-- TTGAGTCCAGAATCCTGCAAGAACTCGGGGAGAGATCGGTAAGGGTGGAA  Raphanus raphanistrum subsp. landra
EY925177       <-- TTGAGTCCAGAATCCTGCAAGAACTCGGGGAGAGATCGGTAAGGGTGGAA  Raphanus raphanistrum subsp. landra
EX775821       --> TTGAGTCCAGAATCCTGCAAGAACTCGGGGAGAGATCGGTAAGGGTGGAA  Raphanus raphanistrum subsp. landra
FD581388       --> TGGAGTCCAGAATCCTGCAAGAACTCAGGGAGAGATCGGTAAGGGTGGAA  Raphanus sativus cv Rat-Tail Radish #3870
FD959140       --> TGGAGTCCAGAATCCTGCAAGAACTCAGGGAGAGATCGGTATGGGTGGAA  Raphanus raphanistrum subsp. maritimus
EV572667       --> TTGAGTCCAGAATCCTGCAAGAACTCGGGGAGAGATCGGTAAGGGTGGAA  Raphanus raphanistrum subsp. landra
EY920711       --> TTGAGTCCAGAATCCTGCAAGAACTCGGGGAGAGATCGGTAAGGGTGGAA  Raphanus raphanistrum subsp. landra
EY944419       --> TTGAGTCCAGAATCCTGCAAGAACTCAGGGAGAGATCGGTAAGGGTGGAA  Raphanus sativus cv Rat-Tail Radish #3870
EX774886       --> TTGAG.............................................  Raphanus raphanistrum subsp. landra
EY895924       --> TTGAGTCCAGAATCCTGCAAGAACTCAGGGAGAGATCGGTAAGGGTGGAA  Raphanus raphanistrum subsp. maritimus

               501    -    551
UN19159        --> GACAACAAGATAGAAGTTCAAAGCTTCCAAGATCTTCATCTCCATCTCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567807       <-- GACAACAAGATAGAAGTTCAAAGCTTCCAAGATCTTCATCTCCATCTCAA
EX770737       <-- GACAACAAGATAGAAGTTCAAAGCTTCCAAGATCTTCATCTCCATCTCAA
FD962635       <-- GACAACAAGATAGAAGTTCAAAGCTTCCAAGATCTTCATCTCCATCTCCA
EX771708       <-- GACAACAAGATAGAAGTTCAAAGCTTCCAAGATCTTCATCTCCATCTCAA
EY925177       <-- GACAACAAGATAGAAGTTCAAAGCTTCCAAGATCTTCATCTCCATCTCAA
EX775821       --> GACAACAAGATAGAAGTTCAAAGCTTCCAAGATCTTCATCTCCATCTCAA
FD581388       --> TACAACAAGATAGAAGTTCAAAGCTTCCAAGATCTTCATCTCCATCTCAA
FD959140       --> GACAACAAGATAGAAGTTCAAAGCTTCCAAGATCTTCATCTCCATCTCCA
EV572667       --> GACAACAAGATAGAAGTTCAAAGCTTCCAAGATCTTCATCTCCATCTCAA
EY920711       --> GACAACAAGATAGAAGTTCAAAGCTTCCAAGATCTTCATCTCCATCTCAA
EY944419       --> TACAACAAGATAGAAGTTCAAAGCTTCCAAGATCTTCATCTCCATCTCAA
EX774886       --> ..................................................
EY895924       --> TACAACAAGATAGAAGTTCAAAGCTTCCAAGATCTTCATCTCCATCTCAA

               551    -    601
UN19159        --> GAATATCTTTAATCTCATACCTGAACTTCTCATCAGCATACAATTTTCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567807       <-- GAATATCTTTAATCTCATACCTGAACTTCTCATCAGCATACAATTTTCTG
EX770737       <-- GAATATCTTTAATCTCATACCTGAACTTCTCATCAGCATACAATTTTCTG
FD962635       <-- GAATATCTTTAATCTCATACCTGAACTTCTCATCAGCATACAATTTTCTG
EX771708       <-- GAATATCTTTAATCTCATACCTGAACTTCTCATCAGCATACAATTTTCTG
EY925177       <-- GAATATCTTTAATCTCATACCTGAACTTCTCATCAGCATACAATTTTCTG
EX775821       --> GAATATCTTTAATCTCATACCTGAACTTCTCATCAGCATACAATTTTCTG
FD581388       --> GAATATCTTTAATCTCATACCTGAACTTCTCATCAGCATACAGTTTTCCG
FD959140       --> GAATATCTTTAATCTCATACCTGAACTTCTCATCAGCATACAATTTTCTG
EV572667       --> GAATATCTTTAATCTCATACCTGAACTTCTCATCAGCATACAATTTTCTG
EY920711       --> GAATATCTTTAATCTCATACCTGAACTTCTCATCAGCATACAATTTTCTG
EY944419       --> GAATATCTTTAATCTCATACCTGAACTTCTCATCAGCATACAGTTTTCTG
EX774886       --> ..................................................
EY895924       --> GAATATCTTTAATCTCATACCTGAACTTCTCATCAGCATACAATTTTCTG

               601    -    651
UN19159        --> ATGTAGAAGACAAGAATCTTGGCATGGACCACACTCTCCTCTGCTTTGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567807       <-- ATGAAGAAGACAAGAATCTTGGCATGGACCACACTCTCCTCTGCTTTGCA
EX770737       <-- ATGTAGAAGACAAGAATCTTGGCATGGACCACACTCTCCTCTGCTTTGCA
FD962635       <-- ATGTAGAAGACAAGAATCTTGGCATGGACCACACTCTCCTTTGCTTTGCA
EX771708       <-- ATGTAGAAGACAAGAATCTTGGCATGGACCACACTCTCCTCTGCTTTGCA
EY925177       <-- ATGTAGAAGACAAGAATCTTGGCATGGACCACACTCTCCTCTGCTTTGCA
EX775821       --> ATGTAAAAAACAAGAATCTTGGCATGGACCACACTCTCCTCTGCTTTGCA
FD581388       --> ATGTAGAAGACAAGAATCT-GGCATGGACCACACTCTCCTCAGCTTTGCA
FD959140       --> ATGTAGAAGA........................................
EV572667       --> ATGAAGAAGACAAGAATCTTGGCATGGACCACACTCTCCTCTGCTTTGCA
EY920711       --> ATGTAGAAGACAAGAATCTTGGCATGGACCACACTCTCCTCTGCTTTGCA
EY944419       --> ATGTAGAAGACAAGAATCTTGGCATGGACCACACTCTCCTCAGCTTTGCA
EX774886       --> ..................................................
EY895924       --> ATGTAGAAGACAAGAATCTTGGCATGGACCACACTCTCCTCTGCTTTGCA

               651    -    701
UN19159        --> AGCCAGATACAAGCAGGTGGGAGCAACAAGCCTTGGCTCATACTCTGTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567807       <-- AGCCAGATACAAGCAGGTGGGAGCAACAAGCCTTGGCTCATACTCTGTCA  Raphanus raphanistrum subsp. landra
EX770737       <-- AGCCAGATACAAGCAGGTGGGAGCAACAAGCCTTGGCTCATACTCTGTCA  Raphanus raphanistrum subsp. landra
FD962635       <-- AGCCAGATACAAGCAGGTGGGAGCAACAAGCCTAGGCTCATACTCTGTCA  Raphanus raphanistrum subsp. maritimus
EX771708       <-- AGCCAGATACAAGCAGGTGGGAGCAACAAGCCTTGGCTCATACTCTGTCA  Raphanus raphanistrum subsp. landra
EY925177       <-- AGCCAGATACAAGCAGGTGGGAGCAACAAGCCTTGGCTCATACTCTGTCA  Raphanus raphanistrum subsp. landra
EX775821       --> AGCCAGATACA.......................................  Raphanus raphanistrum subsp. landra
FD581388       --> AGCCAGATACAAGCAGGTGGGAGCAACAAGCCTAGGCTCATACTCTGTCA  Raphanus sativus cv Rat-Tail Radish #3870
FD959140       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV572667       --> AGCCAGATACAAGCAGGTGGGAGCAACAAGCCTTGGCTCATACTCTGTCA  Raphanus raphanistrum subsp. landra
EY920711       --> AGCCAGATACAAGCAGGTGGGAGCAACAAGCCTTGGCTCATACTCTGTCA  Raphanus raphanistrum subsp. landra
EY944419       --> AGCCAGATACAAGCAGGTGGGAGCAACAAGCCTAGGCTCATACTCCGTCA  Raphanus sativus cv Rat-Tail Radish #3870
EX774886       --> ..................................................  Raphanus raphanistrum subsp. landra
EY895924       --> AGCCAGATACAAGCAGGTGGGAGCAACAAGCCTAGGCTCATACTCTGTCA  Raphanus raphanistrum subsp. maritimus

               701    -    751
UN19159        --> AACTCTTCCTTGTGTAAACACGGCGCATATAGGTTATAGCAGTTGCAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567807       <-- AACTCTTCCTTGTGTAAACACGGCGCATATAGGCTATAGCAGTTGCAACA
EX770737       <-- AACTCTTCCTTGTGTAAACACGGCGCATATAGGTTATAGCAGTTGCAACA
FD962635       <-- AACTCTTCCTTGTGTAAACACGGCGCATATAGGTTATAGCAGTTGCAACA
EX771708       <-- AACTCTTCCTTGTGTAAACACGGCGCATATAGGTTATAGCAGTTGCAACA
EY925177       <-- AACTCTTCCTTGTGTAAACACGGCGCATATAGGTTATAGTAGTTGCAACA
EX775821       --> ..................................................
FD581388       --> AACTCTTCCTTGTGTAAACACGGCGCAT......................
FD959140       --> ..................................................
EV572667       --> AACTCTTCCTTGTGTAAACACGGCGCATATAGGCTATAGCAGTTGCAACA
EY920711       --> AACTCTTCCTTGTGTAAACACGGCGCATATAGGTTATAGTAGTTGCAACA
EY944419       --> AACTCTTCCTTGTGTAAACACGGCGCATATAGGTTATAGCAGTTGCAACA
EX774886       --> ..................................................
EY895924       --> AACTCTTCCTTGTGTAAACACGGCGCATATAGGTTATAGCAGTTGCAACA

               751    -    801
UN19159        --> ACTCTTTGCCTAATCTTAATGTGTTGTGCCAGCTTCGATATATAATTAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567807       <-- ACTCTTTGCCTAATCTTAATGTGTTGTGCCAGCTTCGATATATAATTAGA
EX770737       <-- ACTCTTTGCCTAATCTTAATGTGTTGTGCCAGCTTCGATATATAATTAGA
FD962635       <-- ACCCTTTGCCTAATCTTAATGTGTTGTGCCAGCTTCGATATATAATTAGA
EX771708       <-- ACTCTTTGCCTAATCTTAATGTGTTGTGCCAGCTTCGATATATAATTAGA
EY925177       <-- ACTCTTTGCCTAATCTTAATGTGTTGTGCCAGCTTCGATATATAATTAGA
EX775821       --> ..................................................
FD581388       --> ..................................................
FD959140       --> ..................................................
EV572667       --> ACTCTTTGCCTAATCTTAATGTGTTGTGCCAGCTTCGATATATAATTAGA
EY920711       --> ACTCTTTGCCTAATCTTAATGTGTTGTGC.....................
EY944419       --> ACTCTTTGCCTAATCTTAATGTGTTGTGCCAGCTTCGATATATAATTAGA
EX774886       --> ..................................................
EY895924       --> ACCCTTTGCCTAATCTTAATGTGTTGTG......................

               801    -    851
UN19159        --> CATATGAAGCTTAATGAGTCTCAAATCTTCGACAGAGATTCCTCTCTGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567807       <-- CATATGAAGCTTAATGAGTCTCAAATCTTCGACAGAGATTCCTCTCTGAG
EX770737       <-- CATATGAAGCTTAATGAGTCTCAAATCTTCGACAGAGATTCCTCTCTGAG
FD962635       <-- CATATGAAGCTTAATGAGTCTCAAATCTTCGACAGAGATTCCTCTCTGAG
EX771708       <-- CATATGAAGCTTAATGAGTCTCAAATCTTCGACAG...............
EY925177       <-- CATATGAAGCTTAATGAGTCTCAAATCTTCGACAGAGATTCCTCTCTGAG
EX775821       --> ..................................................
FD581388       --> ..................................................
FD959140       --> ..................................................
EV572667       --> CATATGAAGCTTAATGAGTCTCAAATCTTCGACAGAGATTCCTCTCTGAG
EY920711       --> ..................................................
EY944419       --> CATATGAAGTTTAATGAGTCTCAAATCTTCGACAGAGATTCCTCTCT...
EX774886       --> ..................................................
EY895924       --> ..................................................

               851    -    901
UN19159        --> CATCGAGAGGATGAACAACATTGATCTCTTCTGGGTCCTTGAGCTCTTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567807       <-- CATCGAGAGGATGAACAAAATTGATCTCTTCTGGGTCCTTGAGCTCTTTG
EX770737       <-- CATCGAGAGGATGAACAACATTGATCTCTTCTGGGTCCTTGAGCTCTTTG
FD962635       <-- CATCCAGAGGATGAACAACATTGATCTCTTCTGGGTCCTTGAGCTCTTTG
EX771708       <-- ..................................................
EY925177       <-- CATCGAGAGGATGAACAACATTGATCTCTTCCGGGTCCTTGAGCTCTCTG
EX775821       --> ..................................................
FD581388       --> ..................................................
FD959140       --> ..................................................
EV572667       --> CATCGAGAGGATGAACAAAATTGATCTCTTCTGGG...............
EY920711       --> ..................................................
EY944419       --> ..................................................
EX774886       --> ..................................................
EY895924       --> ..................................................

               901    -    951
UN19159        --> AAGTGCGTTGATGTCCAGAAATTGGAAGCCATTTTTTTTTTTTTTTTTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567807       <-- AAGTGCGTTGATGTCCAGAAATTGGAAGCCATTTTTTTTTTTGCTTTTCT
EX770737       <-- AAGTGCGTTGATGTCCAGAAATTGGAAGCCATTTTTTTTTTGCTTTTCTT
FD962635       <-- AAGTGCGTTGATGTCCAGAAATTGGAAGCCATTTTTTTTTTTTTTTTTTT
EX771708       <-- ..................................................
EY925177       <-- AAGTGCGTTGATGTCCAGAAATTGGAAGCCATTTTTTTTTTTGCTTTTCT
EX775821       --> ..................................................
FD581388       --> ..................................................
FD959140       --> ..................................................
EV572667       --> ..................................................
EY920711       --> ..................................................
EY944419       --> ..................................................
EX774886       --> ..................................................
EY895924       --> ..................................................

               951    -   1001
UN19159        --> TTTTTTTGCTTTTCTTTTTCTTCACCCTTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567807       <-- TTTTcttcacccttcc...............
EX770737       <-- TTTcttcacccttcc................
FD962635       <-- TTTTTTTGCTTTTCTTTTTCTTCACCCTTCC
EX771708       <-- ...............................
EY925177       <-- TTTTcttcacccttcc...............
EX775821       --> ...............................
FD581388       --> ...............................
FD959140       --> ...............................
EV572667       --> ...............................
EY920711       --> ...............................
EY944419       --> ...............................
EX774886       --> ...............................
EY895924       --> ...............................