1      -     51
UN19319        --> GCTTGTCAATGATGTGGAGCAATAATTCAGTGTATTGCAATCCGAGAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW726018       <-- GCTTGTCAATGATGTGGAGCAATAATTCAGTGTATTGCAATCCGAGAAAG
EX889688       <-- ..................................................
FD542862       <-- ..................................................
EX893370       --> ................gaaCAATAATTCAGTGTATTGCAATCCGAGAAAG
FD967661       --> ..................................................
EX899142       --> ..................................................
EW729652       --> ..................................................
FD582520       --> ..................................................

               51     -    101
UN19319        --> ACCGTTTATTCAATTGTTGGCATTATTTCGTTTTCAGAAGACAATTCCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW726018       <-- ACCGTTTATTCAATTGTTGGCATTATTTCATTTTCAGAAGACAATTCCAA
EX889688       <-- ..................................................
FD542862       <-- ..................................................
EX893370       --> ACCGTTTATTCAATTGTTGGCATTATTTCGTTTTCAGAAGACAACTCCAA
FD967661       --> ..................................caaAAGACAACTCCAA
EX899142       --> ...........................................ATTCCAA
EW729652       --> ..................................................
FD582520       --> ..................................................

               101    -    151
UN19319        --> ATTAAGAAAAGCGAATAATCGTTATGAAAAA--TGTGCTTAAAGATACCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW726018       <-- ATTAAGAAAAGCGAATAATCGTTATGAAAAA--TGTGCTTAAAGATACCC
EX889688       <-- ..................................................
FD542862       <-- ..................................................
EX893370       --> ATTAAGAAAAACGGATAATCGTTACGAAAAA-ATGCGCTAAAAGATACCC
FD967661       --> ATTAAGAAAAACGAA--ATCGTTATGAAAAAAATGTGCTTAAAGATACCC
EX899142       --> ATTAAGAAAAGCGAATAATCGTTATGAAAAA--TGTGCTTAAAGATACCC
EW729652       --> .........AGCGAATAATCGTTATGAAAAA--TGTGCTTAAAGATACCC
FD582520       --> ......................TATGAAAAA--TGTGCTTAAAGATACCC

               151    -    201
UN19319        --> ATCAAATGGAAGAGAAGGCTGGTTATCTTGACCAACACGTCAGGTT-ATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW726018       <-- ATCAAATGGAAGAGAAGGCTGGTTATCTTGGCCAACACGTCAGGTTTATT  Raphanus sativus cv Early Scarlet Globe
EX889688       <-- ......................TTATCTTGACCAACACGTCAGGTT-ATT  Raphanus sativus var. oleiformis
FD542862       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX893370       --> ATCAAATGGAAGAGAAGGCTGGTTATCTTGACCAACACGTCAGGTT-ATT  Raphanus sativus var. oleiformis
FD967661       --> ATCAAATGGGAGAGAAGGCTGGCTATCTTGACCAACACGTCAGGTT-ATT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX899142       --> ATCAAATGGAAGAAAAGGCTGGTTATCTTGGCCAACACGTCAGGTTTATT  Raphanus sativus cv Early Scarlet Globe
EW729652       --> ATCAAATGGAAGAGAAGGCTGGTTATCTTGGCCAACACGTCAGGTTTATT  Raphanus sativus cv Early Scarlet Globe
FD582520       --> ATCAAATGGAAAAAAAGGCTGGTTATCTTGACCAACACGTCAGGTT-ATT  Raphanus sativus cv Rat-Tail Radish #3870

               201    -    251
UN19319        --> AACTCAGCGGCTCAAGCTCATGAACTTATCGAGCCAGTCCATGTTTACAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW726018       <-- AACTCAGCGGCTCAAGCTCATGAATTTATCGAGCCAGTCCATGTTTACAC  Raphanus sativus cv Early Scarlet Globe
EX889688       <-- AACTCAGCGGCTCAAGCTCATGAACTTATCGAGCCAGTCCATGTTTACAC  Raphanus sativus var. oleiformis
FD542862       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX893370       --> AACTCAGCGGCTCAAGCTCATGAACTTATCGAGCCAGTCCATGTTTACAC  Raphanus sativus var. oleiformis
FD967661       --> AACTCAGCGGCTCAAGCTCATGAACTTATCGAGCCAGTCCATGTTTACAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX899142       --> AACTCAGCGGCTCAAGCTCATGAATTTATCGAGCCAGTCCATGTTTACAC  Raphanus sativus cv Early Scarlet Globe
EW729652       --> AACTCAGCGGCTCAAGCTCATGAATTTATCGAGCCAGTCCATGTTTACAC  Raphanus sativus cv Early Scarlet Globe
FD582520       --> ATCTCAGCGGCTCAAGCTCATGAACTTATCAAGCCAGTCCATGTTTACAC  Raphanus sativus cv Rat-Tail Radish #3870

               251    -    301
UN19319        --> TCTTCGGTCTCTCAAGTGGCAGTCCAAGAGCTCGGTCCCATATCAGCTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW726018       <-- TCTTTGGTCTCTCAAGTGGCAGTCCAAGAGCTCGGTCCCATATCAGCTGT  Raphanus sativus cv Early Scarlet Globe
EX889688       <-- TCTTCGGTCTCTCAAGTGGCAGTCAAAGAGCTCGGTCCCATATCAGCTGT  Raphanus sativus var. oleiformis
FD542862       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX893370       --> TCTTCGGTCTCTCAAGTGGCAGTCAAAGAGCTCGGTCCCATATCAGCTGT  Raphanus sativus var. oleiformis
FD967661       --> TCTTCGGTCTCTCAAGTGGAAGTCCAAGAGCTCGGTCCCATATCAGCTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX899142       --> TCTTTGGTCTCTCAAGTGGCAGTCCAAGAGCTCGGTCCCATATCAGCTGT  Raphanus sativus cv Early Scarlet Globe
EW729652       --> TCTTTGGTCTCTCAAGTGGCAGTCCAAGAGCTCGGTCCCATATCAGCTGT  Raphanus sativus cv Early Scarlet Globe
FD582520       --> TCTTCGGTCTCTCAAGTGGCAGTCCAAGAGCTCGGTCCCATATCAGCTGT  Raphanus sativus cv Rat-Tail Radish #3870

               301    -    351
UN19319        --> GAGCAGATTCCAAGACTCCTTGAGACGCCAAAAAGAACCGTGTAGTATTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW726018       <-- GAGCAGATTCCAAGACTCCTTGAGACGCCAAAAAGAACCGTGTAGTATTT
EX889688       <-- GAGCAGATTCCAAGACTCCTTGAGACGCCAAAAAGAACCGTGTAGTATTT
FD542862       <-- .................................AGAACCGTGTAGTATTT
EX893370       --> GAGCAGATTCCAAGACTCCTTGAGACGCCAAAAAGAACCGTGTAGTATTT
FD967661       --> GAGCATATTCCAAGACTCCTTGAGACGCCAAAAAGAACCGTGTAGTATTT
EX899142       --> GAGCAGATTCCAAGACTCCTTGAGACGCCAAAA-GAACCGTGTAGTATTT
EW729652       --> G.................................................
FD582520       --> GAGCAGATTCCAAGACTCCTTGAGACGCCAAAAAGAACCGTGTAGTATTT

               351    -    401
UN19319        --> TGCTTCGGTTAGACCATAATAGTTGAGAAGCACTCCGCTGTGAGCATCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW726018       <-- TGCTTCTGTTAGACCATAATAGTTGAGAAGCACTCCGCTGTGAGCATCAA
EX889688       <-- TGCTTCGGTTAGACCATAATAGTTGAGAAGCACTCCGCTGTGAGCATCAA
FD542862       <-- -GCTTCGGTTAGCCCATAATAGTTGAGAAGCACTCCGCTGTGAGCATCAA
EX893370       --> TGCTTCGGTTAGACCATAATAGTTGAGAAGCACTCCGCTGTGAGCATCAA
FD967661       --> TGCTTCGGTTAGCCCATAATAGTTGAAAAGCACTCCGCTGTGAGCATCAA
EX899142       --> TGCTTCTGTTAGACCATAATAGTTGAAAAGCACTCCGCTGTGAGCATCAA
EW729652       --> ..................................................
FD582520       --> TGCTTCGGTTAGACCATAATAGTTGAGAAGCACTCCGCTGTGAGCATCAA

               401    -    451
UN19319        --> CGTTAGGCCAAGGGTTCTTGACCTTTCCTAGCTCGGTTAGAATAGGAGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW726018       <-- CGTTAGGCCAAGGGTTCTTGACCTTTCCTAGCTCGGTTAGAATAGGAGGC
EX889688       <-- CGTTAGGCCAAGGGTTCTTGACCTTTCCTAGCTCGGTTAGAATAGGAGGC
FD542862       <-- CGTTAGGCCAAGGGTTCTTGACCTTTCCTAGCTCGGTTAGAATAGGAGGC
EX893370       --> CGTTAGGCCAAGGGTTCTTGACCTTTCCTAGCTCGGTTAGAATAGGAGGC
FD967661       --> CGTTAGGCCAAGGGTTCTTGACCTTTCCTAGCTCGGTTAGAATAGGAGGC
EX899142       --> CGTTAGGCCAAGGGTTCTTGACCTTTCCTAGCTCGGTTAGAATAGGAGGC
EW729652       --> ..................................................
FD582520       --> CGTTAGGCCAAGGGTTCTTGACCTTTCCTAGCTCGGTTAGAATAGGAGGC

               451    -    501
UN19319        --> ACAACTTCATAAAGCTTAGAAACCAGCTGAAAAAGAGGGTCATCAGGTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW726018       <-- ACAACTTCATAAAGCTTAGAAACCAGCTGAAAAAGAGGGTCATCAGGTAG
EX889688       <-- ACAACTTCATAAAGCTTAGAAACCAGCTGAAAAAGAGGGTCATCAGGTAG
FD542862       <-- ACAACTTCATAAAGCTTAGAAACCAGCTGAAAAAGAGGGTCATCAGGTAG
EX893370       --> ACAACTTCATAAAGCTTAGAAACCAGCTGAAAAAGAGGGTCATCAGGTAG
FD967661       --> ACAACTTCATAAAGCTTAAAAACCAGCTGAAAAAGAGGGTCATCAGGTAG
EX899142       --> ACAACTTCATAAAGCTTAAAAACCAGCTGAAAAAGAGGGTCATCAGGTAG
EW729652       --> ..................................................
FD582520       --> ACAACTTCATAAAGCTTAAAAACCAGCTGAAAAAGAGGGTCATCAGGTAG

               501    -    551
UN19319        --> ATGCTTCAAGGCGAATTCTCTTTGGCATACATATCTTGGATCCGTCTTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW726018       <-- ATGCTTCAAGGCGAATTCTCTTTGGCATACATATCTTGGATCCGTCTTAC
EX889688       <-- ATGCTTCAAGGCGAATTCTCTTTGGCACACATATCTTGGATCCGTCTTAC
FD542862       <-- ATGCTTCAAGGCGAATTCTCTTTGGCATACATATCTTGGATCTGTCTTAC
EX893370       --> ATGCTTCAAGGCGAATTCTCTTTGGCACACATATCTTGGATCCGTCTTAC
FD967661       --> ATGCTTCAAGGCGAATTCTCTTTGGCATACATATCTTGGATCTGTCTTAC
EX899142       --> ATGCTTCAAGGCGAATTCTCTTTGGCATACATATCTTGGATCCGTCTTAC
EW729652       --> ..................................................
FD582520       --> ATGCTTCAAGGCGAATTCTCTTTGGCATACATATCTTGGATCCGTCTTAC

               551    -    601
UN19319        --> GCAAAACACCATGGCCATATCCTGGAACTACCTTGCCACTGTTTAACGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW726018       <-- GCAAAACACCATGGCCATATCCTGGAACTACCTTGCCACTGTTTAACGTT
EX889688       <-- GCAAAACACCATGGCCATATCCTGGAACTACATCGCCACTGTTTAACGTT
FD542862       <-- GCAAAACACCATGGCCATATCCTGGAACTACCTTGCCACTGTTTAACGTT
EX893370       --> GCAAAACACCATGGCCATATCCTGGAACTACATCGCCACTGTTTAACGTT
FD967661       --> GCAAAACACCATGGCCATATCCTGGAACTACCTTGCCACTGTTTAACGTT
EX899142       --> GCAAAACACCATGGCCATATCTTGGAACTACCTTGCCACTGTTTAACGTT
EW729652       --> ..................................................
FD582520       --> GCAAAACACCATGGCCATATCCTGGAACTACCTTGCCACTGTTTAACGTT

               601    -    651
UN19319        --> TTCCAGACATAATCTTTCAGGTGTTCCTTTGATATATTTTCCCCGCATTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW726018       <-- TTCCAGACATAATCTTTCAGGTGTTCC.......................
EX889688       <-- TTCCAGACATAATCTTTCAGGTGTTCCTTTGATATATTTTCCCCGCATTC
FD542862       <-- TTCCAGACATAATCTTTCAGGTGTTCCTTTGATATATTTTCCCCGCATTC
EX893370       --> TTCCAGACATAATCTTTCAGGTGTTCCTTTGATATATTTTCCCCGCATTC
FD967661       --> TTCCAGACATAATCTTTCAGGTGTTCCTTTGATATATTTTCCCCGCATTC
EX899142       --> TTCCAGACATAATCTTTCAGGTGTTCCTTTGATATATTTTCCCCGCATTC
EW729652       --> ..................................................
FD582520       --> TTCCAGACATAATCTTTCAAGTGTTCCTTTGATATATTTTCCCCGCATTC

               651    -    701
UN19319        --> CGCCACAACTGATTTGATCCATAGCAAAACTTCCTGATTAGCCAAACCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW726018       <-- ..................................................
EX889688       <-- CGCCACAACTGATTTGATCCATAGCAAAACTTCCTGATTAGCCAAACCAT
FD542862       <-- CGCCACAACTGATTTGATCCATAGCAAAACTTCCTGATTAGCCAAACCAT
EX893370       --> CGCCACAACTGATTTGATCCATAGCAAAACTTCCTGATTAGCCAAACCAT
FD967661       --> CGCCACAACTGATTTGATCCATAGCAAAACTTCCTGATTAGCCAAACCAT
EX899142       --> CGCCACAACTGATTT...................................
EW729652       --> ..................................................
FD582520       --> CGCCACAACTGATATGATCCATAGCAAAACTTCCTGATTAGCCAAACCAT

               701    -    751
UN19319        --> GGAGTGGTCCAGCTAAACCATTTAGCGCAGCTGCAAATGAAAGATATGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW726018       <-- ..................................................
EX889688       <-- GGAGTGGTCCAGCTAAACCATTTAACGCAGCTGCAAATGAAAGATATGGA
FD542862       <-- GGAGTGGTCCAGCTAAACCATTTAGCGCAGCTGCAAATGAAAGATATGGA
EX893370       --> GGAGTGGTCCAGCTAAACCATTTAACGCAGCTGCAAATGAAAGATATGGA
FD967661       --> GGAGTGGTCCAGCTAAACCATTTAGCGCAGCTG.................
EX899142       --> ..................................................
EW729652       --> ..................................................
FD582520       --> GGAG..............................................

               751    -    801
UN19319        --> TCTGAGAGGGCACTCCCAACCAAGTGACCAGCGTGAGCACTAACATTTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW726018       <-- ..................................................
EX889688       <-- TCTGAGAGGGCACTCCCAACCAAGTGACCAGCGTGAGCACTAACATTTCC
FD542862       <-- TCTGAGAGGGCACTCCCAACCAAGTGGCCAGCGTGAGCACTAACATTTCC
EX893370       --> TCTGAGAGGGCACTCCCAACCAAGTGACCAGCGTGAGCACTAACATTTCC
FD967661       --> ..................................................
EX899142       --> ..................................................
EW729652       --> ..................................................
FD582520       --> ..................................................

               801    -    851
UN19319        --> ACCTTCATGATCACTGTGAATGGTGATATAAAGCCTCATGAGCTCTTTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW726018       <-- ..................................................
EX889688       <-- ACCTTCATGATCACTGTGAATGGTGATATAAAGCCTCATGc.........
FD542862       <-- ACCTTCATGATCACTGTGAATGGTGATATAAAGCCTCATGAGCTCTTTCA
EX893370       --> ACCTTCATGATCACTGTGAATGGTGATATAAAGCCTCATGc.........
FD967661       --> ..................................................
EX899142       --> ..................................................
EW729652       --> ..................................................
FD582520       --> ..................................................

               851    -    901
UN19319        --> TCTGAGGACTATCAAATCCCAGCATGTGTGAAAAATTAGCACCATAATCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW726018       <-- ..................................................
EX889688       <-- ..................................................
FD542862       <-- TCTGAGGACTATCAAATCCCAGCATGTGTGAAAAATTAGCACCATAATCC
EX893370       --> ..................................................
FD967661       --> ..................................................
EX899142       --> ..................................................
EW729652       --> ..................................................
FD582520       --> ..................................................

               901    -    951
UN19319        --> AAAGAATCGTCTAGTGGAATGATGCTACCGTCTTTAAACATCCTCCGGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW726018       <-- ..................................................
EX889688       <-- ..................................................
FD542862       <-- AAAGAATCGTCTAGTGGAATGATGCTACCGTCTTTAAACATCCTCCGGTA
EX893370       --> ..................................................
FD967661       --> ..................................................
EX899142       --> ..................................................
EW729652       --> ..................................................
FD582520       --> ..................................................

               951    -   1001
UN19319        --> AACATATGAAGCTACAACAGGAACACGAGCAATCAAGTTGAGGGCATCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW726018       <-- ..................................................
EX889688       <-- ..................................................
FD542862       <-- AACATATGAAGCTACAACAGGAACACGAGCAATCAAGTTGAGGGCATCCT
EX893370       --> ..................................................
FD967661       --> ..................................................
EX899142       --> ..................................................
EW729652       --> ..................................................
FD582520       --> ..................................................

               1001   -   1051
UN19319        --> CAAAGGTTGGCTCCCAATACTTTGACTTATGAACAACACCCTCCTCATAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW726018       <-- ..................................................
EX889688       <-- ..................................................
FD542862       <-- CAAAGGTTGGCTCCCAATACTTTGACTTATGAACAACACCCTCCTCATAT
EX893370       --> ..................................................
FD967661       --> ..................................................
EX899142       --> ..................................................
EW729652       --> ..................................................
FD582520       --> ..................................................

               1051   -   1101
UN19319        --> GC
                   ~~
EW726018       <-- ..
EX889688       <-- ..
FD542862       <-- GC
EX893370       --> ..
FD967661       --> ..
EX899142       --> ..
EW729652       --> ..
FD582520       --> ..