RadishBase

| | | |
Alignment for radish unigene UN19345

               1      -     51
UN19345        --> ATCTCTCTTTCTCTCTCCCTTCTCCCCTCCGACAAAATCTCCGATCACCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544447       <-- ..................................................
FD984476       <-- ..................................................
FD967907       <-- ..................................................
FD538326       <-- ..................................................
EY920130       <-- ..................................................
EY934429       <-- ..................................................
FD974840       <-- ..................................................
EV548845       --> ATCTCTCTTTCTCTTTCCCTTCTCCCCTCCGACAAAATCTCCGATCACCG
EY924489       --> ATCTCTCTTTCTCTCTCCCTTCTCCCCTCCGACAAAATCTCCGATCACCG
EY937885       --> ATCTCTCTTTCTCTCTCCCTTCTCCCCTCCGACAAAATCTCCGATCACCG
FD971898       --> ATCTCTCTTTCTCTCTCCCTTCTCCCTTCCGACAAAATCTCCGATCGCCG
FD988607       --> ATCTCTCTTTCTCTCTCCCTTCTCCCCTCCGACAAAATCTCCGATCACCG
FY453194       --> ...................TTCTCCCCTCCGACAAA-TCTCCGATCACCG
FY432610       --> ..........................CTCCGACAAA-TCTCCGATCACCG
FY438306       --> ............................CCGACAAA-TCTCCGATCACCG
FY432301       --> ...................................AATCTCCGATCACCG
EY938252       --> ..................................................
FD542195       --> ..................................................
FD948848       --> ..................................................
FD978640       --> ..................................................

               51     -    101
UN19345        --> ACAAAAATGGGCGCTGAGGCAAACGCATCCTTCAACTTCCTAATCTACGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544447       <-- ..................................................
FD984476       <-- ..................................................
FD967907       <-- ..................................................
FD538326       <-- ..................................................
EY920130       <-- ..................................................
EY934429       <-- ..................................................
FD974840       <-- ..................................................
EV548845       --> ACAAAAATGGGCGCTGAGGCAAACGCATCCTTCAACTTCCTAATCTACGG
EY924489       --> ACAAAAATGGGCGCTGAGGCAAACGCATCCTTCAACTTCCTAATCTACGG
EY937885       --> ACAAAAATGGGCGCTGAGGCAAACGCATCCTTCAACTTCCTAATCTACGG
FD971898       --> ACAAAAATGGGCGCTGAGGCAAACGCATCCTTCAACTTCCTAATCTACGG
FD988607       --> ACAAAAATGGGCGCTGAGGCAAACGCATCCTTCAACTTCCTAATCTACGG
FY453194       --> ACAAAAATGGGCGCTGAGGCAAACGCATCCTTCAACTTCCTAATCTACGG
FY432610       --> ACAAAAATGGGCGCTGAGGCAAACGCATCCTTCAACTTCCTAATCTACGG
FY438306       --> ACAAAA-TGGGCGCTGAGGCAAACGCATCCTTCAACTTCCTAATCTACGG
FY432301       --> ACAAAA-TGGGCGCTGAGGCAAACGCATCCTTCAACTTCCTAATCTACGG
EY938252       --> ..................................................
FD542195       --> ..................................................
FD948848       --> ..................................................
FD978640       --> ..................................................

               101    -    151
UN19345        --> CCGAACCGGATGGATCGGCGGACTACTCGGCAAGCTCTGCGAGTCCCAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544447       <-- ..................................................
FD984476       <-- ..................................................
FD967907       <-- ..................................................
FD538326       <-- ..................................................
EY920130       <-- ..................................................
EY934429       <-- ..................................................
FD974840       <-- ..................................................
EV548845       --> CCGAACCGGATGGATCGGCGGACTACTCGGCAAGCTCTGCGAGTCCCAGG
EY924489       --> CCGAACCGGATGGATCGGCGGACTACTCGGCA-GCTCTGCGAGGCCCAGG
EY937885       --> CCGAACCGGATGGATCGGCGGACTACTCGGCAAGCTCTGCGAGTCCCAGG
FD971898       --> CCGAACCGGATGGATCGGCGGACTACTCGGCAAGCTCTGCGAGTCTCAGG
FD988607       --> CCGAACCGGATGGATCGGCGGACTACTCGGCAAGCTCTGCGAGGCCCAGG
FY453194       --> CCGAACCGGATGGATCGGCGGACTACTCGGCAAGCTCTGCGAGTCCCAGG
FY432610       --> CCGAACCGGATGGATCGGCGGACTACTCGGCAAGCTCTGCGAGTCCCAGG
FY438306       --> CCGAACCGGATGGATCGGCGGACTACTCGGCAAGCTCTGCGAGTCCCAGG
FY432301       --> CCGAACCGGATGGATCGGCGGACTACTCGGCAAGCTCTGCGAGTCCCAGG
EY938252       --> ..................................................
FD542195       --> ..................................................
FD948848       --> ..................................................
FD978640       --> ..................................................

               151    -    201
UN19345        --> GAATCTCCTACACTTACGGATCCGGTCGGCTCCAAGACCGTCAATCCATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544447       <-- ..................................................
FD984476       <-- ..................................................
FD967907       <-- ..................................................
FD538326       <-- ..................................................
EY920130       <-- ..................................................
EY934429       <-- ..................................................
FD974840       <-- ..................................................
EV548845       --> GAATCTCCTACACTTACGGATCCGGTCGGCTCCAAGACCGTCAATCCATC
EY924489       --> GAATCTCCTACACTTACGGATCCGGTCGGCTCCAAGACCGTCAATCCATC
EY937885       --> GAATCTCCTACACTTACGGATCCGGTCGGCTCCAAGACCGTCAATCCATC
FD971898       --> GAATCTCCTACACTTACGGATCCGGTCGGCTCCAAGACCGTCAATCCATC
FD988607       --> GAATCTCCTACACTTACGGATCCGGTCGGCTCCAAGACCGTCAATCCATC
FY453194       --> GAATCTCCTACACTTACGGATCCGGTCGGCTCCAAGACCGTCAATCCATC
FY432610       --> GAATCTCCTACACTTACGGATCCGGTCGGCTCCAAGACCGTCAATCCATC
FY438306       --> GAATCTCCTACACTTACGGATCCGGTCGGCTCCAAGACCGTCAATCCATC
FY432301       --> GAATCTCCTACACTTACGGATCCGGTCGGCTCCAAGACCGTCAATCCATC
EY938252       --> ..................................................
FD542195       --> ..................................................
FD948848       --> ..................................................
FD978640       --> ..................................................

               201    -    251
UN19345        --> GTCTCCGACATCGAGACCGTGAAGCCTAGCCACGTGTTCAACGCCGCCGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544447       <-- ..................................................
FD984476       <-- ..................................................
FD967907       <-- ..................................................
FD538326       <-- ..................................................
EY920130       <-- ..................................................
EY934429       <-- ..................................................
FD974840       <-- ..................................................
EV548845       --> GTCTCCGACATCGAGACCGTGAAGCCTAGCTACGTGTTCAACGCCGCCGG
EY924489       --> GTCTCCGACATCGAGACCGTGAAGCCTAGCCACGTGTTCAACGCCGCCGG
EY937885       --> GTCTCCGACATCGAGACCGTGAAGCCTAGCCACGTGTTCAACGCCGCCGG
FD971898       --> GTCTCCGACATCGAGACCGTGAAGCCTAGCCACGTGTTCAACGCCGCCGG
FD988607       --> GTCTCCGACATCGAGACCGTGAAGCCTAGCCACGTGTTCAACGCCGCCGG
FY453194       --> GTCTCCGACATCGAGACCGTGAAGCCTAGCCACGTGTTCAACGCCGCCGG
FY432610       --> GTCTCCGACATCGAGACCGTGAAGCCTAGCCACGTGTTCAACGCCGCCGG
FY438306       --> GTCTCCGACATCGAGACCGTGAAGCCTAGCCACGTGTTCAACGCCGCCGG
FY432301       --> GTCTCCGACATCGAGACCGTGAAGCCTAGCCACGTGTTCAACGCCGCCGG
EY938252       --> ..................................................
FD542195       --> ..................................................
FD948848       --> ..................................................
FD978640       --> ..................................................

               251    -    301
UN19345        --> AGTCACCGGACGTCCCAACGTCGACTGGTGCGAGTCCCACAAGGTCGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544447       <-- ..................................................
FD984476       <-- ..................................................
FD967907       <-- ..................................................
FD538326       <-- ..................................................
EY920130       <-- ..................................................
EY934429       <-- ..................................................
FD974840       <-- ..................................................
EV548845       --> AGTCACCGGACTTCCCAACGTCGACTGGTGCGAGTCCCACAAGGTCGAGA
EY924489       --> AGTCACCGGACGTCCCAACGTCGACTGGTGCGAGTCCCACAAGGTCGAGA
EY937885       --> AGTCACCGGACGTCCCAACGTCGACTGGTGCGAGTCCCACAAGGTCGAGA
FD971898       --> AGTCACCGGCCGTCCCAACGTCGACTGGTGCGAGTCCCACAAGGTCGAGA
FD988607       --> AGTCACCGGACGTCCCAACGTCGACTGGTGCGAGTCCCACAAGGTCGAGA
FY453194       --> AGTCACCGGACGTCCCAACGTCGACTGGTGCGAGTCCCACAAGGTCGAGA
FY432610       --> AGTCACCGGACGTCCCAACGTCGACTGGTGCGAGTCCCACAAGGTCGAGA
FY438306       --> AGTCACCGGACGTCCCAACGTCGACTGGTGCGAGTCCCACAAGGTCGAGA
FY432301       --> AGTCACCGGACGTCCCAACGTCGACTGGTGCGAGTCCCACAAGGTCGAGA
EY938252       --> ..................................................
FD542195       --> ..................................................
FD948848       --> ..................................................
FD978640       --> ..................................................

               301    -    351
UN19345        --> CCATCCGCACGAACGTCGCCGGGACATTGACTCTCGCCGACATTTGCAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544447       <-- ...............................TCTCGCCGACATTTGCAGA
FD984476       <-- .........................................ATTTGCAGA
FD967907       <-- ..................................................
FD538326       <-- ..................................................
EY920130       <-- ..................................................
EY934429       <-- ..................................................
FD974840       <-- ..................................................
EV548845       --> CCATCCGTACGAACGTCGCCGGGACCTTGACTCTCGCCGACATTTGCAGA
EY924489       --> CCATCCGCACGAACGTCGCCGGGACCTTGACTCTCGCCGACATTTGCAGA
EY937885       --> CCATCCGCACGAACGTCGCCGGGACATTGACTCTCGCCGACATTTGCAGA
FD971898       --> CCATCCGCACGAACGTCGCCGGGACATTGACTCTCGCCGACATTTGCAGA
FD988607       --> CCATCCGCACGAACGTCGCCGGGACCTTGACTCTCGCCGACATTTGCAGA
FY453194       --> CCATCCGCACGAACGTCGCCGGGACATTGACTCTCGCCGACATTTGCAGA
FY432610       --> CCATCCGCACGAACGTCGCCGGGACATTGACTCTCGCCGACATTTGCAGA
FY438306       --> CCATCCGCACGAACGTCGCCGGGACATTGACTCTCGCCGACATTTGCAGA
FY432301       --> CCATCCGCACGAACGTCGCCGGGACATTGACTCTCGCCGACATTTGCAGA
EY938252       --> .............................................GCAGA
FD542195       --> ..................................................
FD948848       --> ..................................................
FD978640       --> ..................................................

               351    -    401
UN19345        --> GAGAAAGGACTCGTTCTGATCAACTACGCCACCGGTTGTATATTCGAGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544447       <-- GAGAAAGGACTCGTTCTGATCAACTACGCCACCGGTTGTATATTCGAGTA
FD984476       <-- GAGAAAGGACTCGTTCTGATCAACTACGCCACCGGTTGTATATTCGAGTA
FD967907       <-- .............................................GAGTA
FD538326       <-- ..................................................
EY920130       <-- ..................................................
EY934429       <-- ..................................................
FD974840       <-- ..................................................
EV548845       --> GAGAAAGGACTCGTTCTGATCAACTACGCCACCGGTTGTATATTCGAGTA
EY924489       --> GAGAAAGGACTCGTTCTGATCAACTACGCCACCGGTTGTATATTCGAGTA
EY937885       --> GAGAAAGGACTCGTTCTGATCAACTACGCCACCGGTTGTATATTCGAGTA
FD971898       --> GAGAAAGGACTCGTTCTGATCAACTACGCCACCGGTCGTATATTCGAGTA
FD988607       --> GAGAAAGGACTCGTTCTGATCAACTACGCCACCGGTTGTATATTCGAGTA
FY453194       --> GAGAAAGGACTCGTTCTGATCAACTACGCCACCGGTTGTATATTCGAGTA
FY432610       --> GAGAAAGGACTCGTTCTGATCAACTACGCCACCGGTTGTATATTCGAGTA
FY438306       --> GAGAAAGGACTCGTTCTGATCAACTACGCCACCGGTTGTATATTCGAGTA
FY432301       --> GAGAAAGGACTCGTTCTGATCAACTACGCCACCGGTTGTATATTCGAGTA
EY938252       --> GAGAAAGGACTCGTTCTGATCAACTACGCCACCGGTTGTATATTCGAGTA
FD542195       --> ........................................gATTCGAGTA
FD948848       --> ..................................................
FD978640       --> ..................................................

               401    -    451
UN19345        --> CGATGCGGGTCATACTCTCGGGTCGGGTGTCGGATTCAAGGAGGAGGATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544447       <-- CGATGCGGGTCATACTCTCGGGTCGGGTGTCGGATTCAAGGAGGAGGATA
FD984476       <-- CGATGCGGGTCATATTCTCGGGTCGGGTGTCGGATTCAAGGAGGAGGATA
FD967907       <-- CGGTGCGGGTCATACTCTCGGGTCGGGTGTCGGATTCAAGGAGGAGGATA
FD538326       <-- ..ATGCGGGTCATACTCCCGGGTCGGGTGTCGGATTCGAGGAGGAGGATA
EY920130       <-- ..................................TTCAAGGAGGAGGATA
EY934429       <-- ..................................................
FD974840       <-- ..................................................
EV548845       --> CGATGCGGGTCATACTCTCGGGTCGGGTGTCGGATTCAAGGAGGAGGATA
EY924489       --> CGATGCGGGTCATACTCTCGGGTCGGGTGCCGGATTCAAGGAGGAGGATA
EY937885       --> CGATGCGGGTCATACTCTCGGGTCGGGTGTCGGATTCAAGGAGGAGGATA
FD971898       --> CGGTGCGGGTCATACTCTCGGGTCGGGTGTCGGATTCAAGGAGGAGGATA
FD988607       --> CGATGCGGGTCATATTCTCGGGTCGGGTGTCGGATTCAAGGAGGAGGATA
FY453194       --> CGATGCGGGTCATACTCTCGGGTCGGGTGTCGGATTCAAGGAGGAGGATA
FY432610       --> CGATGCGGGTCATACTCTCGGGTCGGGTGTCGGATTCAAGGAGGAGGATA
FY438306       --> CGATGCGGGTCATACTCTCGGGTCGGGTGTCGGATTCAAGGAGGAGGATA
FY432301       --> CGATGCGGGTCATACTCTCGGGTCGGGTGTCGGATTCAAGGAGGAGGATA
EY938252       --> CGATGCGGGTCATACTCTCGGGTCGGGTGTCGGATTCAAGGAGGAGGATA
FD542195       --> CGATGCGGGTCATACTCCCGGGTCGGGTGTCGGATTCGAGGAGGAGGATA
FD948848       --> ..................................................
FD978640       --> ..................................................

               451    -    501
UN19345        --> CCCCTAACTTCACCGGGTCTTTCTACTCCAAGACCAAAGCTATGGTGGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544447       <-- CCCCTAACTTCACCGGGTCTTTCTACTCCAAGACCAAAGCTATGGTGGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD984476       <-- CCCCTAACTTCACCGGGTCTTTCTACTCCAAGACCAAAGCTATGGTGGAG  Raphanus raphanistrum subsp. landra
FD967907       <-- CTCCTAACTTCACCGGGTCTTTCTACTCCAAGACCAAAGCTATGGTGGAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD538326       <-- CTCCTAACTTCACCGGGTCTTTCTACTCCAAGACCAAAGCTATGGTGGAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY920130       <-- CCCCTAACTTCACCGGGTCTTTCTACTCCAAGACCAAAGCTATGGTGGAG  Raphanus raphanistrum subsp. landra
EY934429       <-- .................................................G  Raphanus sativus cv Early Scarlet Globe
FD974840       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV548845       --> CCCCTAACTTCACCGGGTCTTTCTACTCCAAGACCAAAGCTATGGTGGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY924489       --> CCCCTAACTTCACCGGGTCTTTCTACTCCAAGACCAAAGCTATGGTGGAG  Raphanus raphanistrum subsp. landra
EY937885       --> CCCCTAACTTCACCGGGTCTTTCTACTCCAAGACCAAAGCTATGGTGGAG  Raphanus sativus cv Early Scarlet Globe
FD971898       --> CTCCTAACTTCACCGGGTCTTTCTACTCCAAGACCAAAGCTATGGTGGAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD988607       --> CCCCTAACTTCACCGGGTCTTTCTACTCCAAGACCAAAGCTATGGTGGAG  Raphanus raphanistrum subsp. landra
FY453194       --> CCCCTAACTTCACCGGGTCTTTCTACTCCAAGACCAAAGCTATGGTGGAG  Raphanus sativus cv GSK3-1
FY432610       --> CCCCTAACTTCACCGGGTCTTTCTACTCCAAGACCAAAGCTATGGTGGAG  Raphanus sativus cv GSK3-1
FY438306       --> CCCCTAACTTCACCGGGTCTTTCTACTCCAAGACCAAAGCTATGGTGGAG  Raphanus sativus cv GSK3-1
FY432301       --> CCCCTAACTTCACCGGGTCTTTCTACTCCAAGACCAAAGCTATGGTGGAG  Raphanus sativus cv GSK3-1
EY938252       --> CTCCTAACTTCACCGGGTCTTTCTACTCCAAGACCAAAGCTATGGTGGAG  Raphanus sativus cv Early Scarlet Globe
FD542195       --> CTCCTAACTTCACCGGGTCTTTCTACTCCAAGACCAAAGCTATGGTGGAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD948848       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD978640       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               501    -    551
UN19345        --> GAGCTGCTCAAGAACTATGAAAACGTATGCACGCTAAGAGTGCGGATGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544447       <-- GAGCTGCTCAAGAACTATGAAAACGTATGCACACTAAGAGTGCGGATGCC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD984476       <-- GAGCTGCTCAAGAACTATGAAAACGTATGCACGCTAAGAGTGCGGATGCC  Raphanus raphanistrum subsp. landra
FD967907       <-- GAGTTGCTCAAGAACTATGAAAACGTATGCACACTAAGAGTGCGGATGCC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD538326       <-- GAGTTGCTCAAGAACTATGAAAACGTATGCACACTAAGAGTGCGGATGCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY920130       <-- GAGCTGCTCAAGAACTATGAAAACGTATGCACGCTAAGAGTGCGGATGCC  Raphanus raphanistrum subsp. landra
EY934429       <-- GAGCTTCTCAAGAACTATGAAAACGTATGCACGCTAAGAGTGCGGATGCC  Raphanus sativus cv Early Scarlet Globe
FD974840       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV548845       --> GAGCTGCTCAAGAACTATGAAAACGTATGCACACTAAGAGTGCGGATGCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY924489       --> GAGCTGCTCAAGAACTATGAAAACGTATGCACGCTAAGAGTGCGGATGCC  Raphanus raphanistrum subsp. landra
EY937885       --> GAGCTTCTCAAGAACTATGAAAACGTATGCACGCTAAGAGTGCGGATGCC  Raphanus sativus cv Early Scarlet Globe
FD971898       --> GAGTTGCTCAAGAACTATGAAAACGTATGCACACTAAGAGTGCGGATGCC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD988607       --> GAGCTGCTCAAGAACTATGAAAACGTATGCACGCTAAGAGTGCGGATGCC  Raphanus raphanistrum subsp. landra
FY453194       --> GAGCTTCTCAAGAACTATGAAAACGTATGCACGCTAAGAGTGCGGATGCC  Raphanus sativus cv GSK3-1
FY432610       --> GAGCTTCTCAAGAACTATGAAAACGTATGCACGCTAAGAGTGCGGATGCC  Raphanus sativus cv GSK3-1
FY438306       --> GAGCTTCTCAAGAACTATGAAAACGTATGCACGCTAAGAGTGCGGATGCC  Raphanus sativus cv GSK3-1
FY432301       --> GAGCTTCTCAAGAATTATGAAAACGTATGCACGCTAAGAGTGCGGATGCC  Raphanus sativus cv GSK3-1
EY938252       --> GAGCTTCTCAAGAACTATGAAAACGTATGCACGCTAAGAGTGCGGATGCC  Raphanus sativus cv Early Scarlet Globe
FD542195       --> GAGTTGCTCAAGAACTATGAAAACGTATGCACACTAAGAGTGCGGATGCC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD948848       --> .............gCTATGAAAACGTATGCACGCTAAGAGTGCGGATGCC  Raphanus sativus cv Early Scarlet Globe
FD978640       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               551    -    601
UN19345        --> CATCTCTTCTGATCTATCAAACCCAAGAAACTTCATCACCAAGATTGCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544447       <-- CATCTCTTCGGATCTATCAAACCCAAGAAACTTCATCACCAAGATTGCTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD984476       <-- CATCTCTTCTGATCTATCAAACCCAAGAAACTTCATCACCAAGATTGCTC  Raphanus raphanistrum subsp. landra
FD967907       <-- CATCTCTTCGGATCTATCAAACCCAAGAAACTTCATCACCAAGATTGCTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD538326       <-- CATCTCTTCGGATCTATCAAACCCAAGAAACTTCATCACCAAGATTGCTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY920130       <-- CATCTCTTCTGATCTATCAAACCCAAGAAACTTCATCACCAAGATTGCTC  Raphanus raphanistrum subsp. landra
EY934429       <-- CATCTCTTCTGATCTATCAAACCCAAGAAACTTCATCACCAAGATTGCTC  Raphanus sativus cv Early Scarlet Globe
FD974840       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV548845       --> CATCTCTTCGGATCTATCAAACCCAAGAAACTTCATCACCAAGATTGCTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY924489       --> CATCTCTTCTGATCTATCAAACCCAAGAAACTTCATCACCAAGATTGCTC  Raphanus raphanistrum subsp. landra
EY937885       --> CATCTCTTCTGATCTATCAAACCCAAGAAACTTCATCACCAAGATTGCTC  Raphanus sativus cv Early Scarlet Globe
FD971898       --> CATCTCTTCGGATCTATCAAACCCAAGAAACTTCATCACCAAGATTGCTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD988607       --> CATCTCTTCTGATCTATCAAACCCAAGAAACTTCATCACCAAGATTGCTC  Raphanus raphanistrum subsp. landra
FY453194       --> CATCTCTTCTGATCTATCAAACCCAAGAAACTTCATCACCAAGATTGCTC  Raphanus sativus cv GSK3-1
FY432610       --> CATCTCTTCTGATCTATCAAACCCAAGAAACTTCATCACCAAGATTGCTC  Raphanus sativus cv GSK3-1
FY438306       --> CATCTCTTCTGATCTATCAAACCCAAGAAACTTCATCACCAAGATTGCTC  Raphanus sativus cv GSK3-1
FY432301       --> CATCTCTTCTGATCTATCAAACCCAAGAAACTTCATCACCAAGATTGCTC  Raphanus sativus cv GSK3-1
EY938252       --> CATCTCTTCTGATCTATCAAACCCAAGAAACTTCATCACCAAGATTGCTC  Raphanus sativus cv Early Scarlet Globe
FD542195       --> CATCTCTTCGGATCTATCAAACCCAAGAAACTTCATCACCAAGATTGCTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD948848       --> CATCTCTTCTGATCTATCAAACCCAAGAAACTTCATCACCAAGATTGCTC  Raphanus sativus cv Early Scarlet Globe
FD978640       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               601    -    651
UN19345        --> GGTACGAGAAAGTCGTTGACATCCCAAACTCCATGACCATCCTCGACGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544447       <-- GGTACGAGAAAGTCGTTGACATCCCAAACTCCATGACCATCCTCGACGAG
FD984476       <-- GGTACGAGAAAGTCGTTGACATCCCAAACTCCATGACCATCCTCGACGAG
FD967907       <-- GGTACGAGAAAGTCGTTGACATCCCAAACTCCATGACCATCCTCGACGAG
FD538326       <-- GGTACGAGAAAGTCGTTGACATCCCAAACTCCATGACCATCCTCGACGAG
EY920130       <-- GGTACGAGAAAGTCGTTGACATCCCAAACTCCATGACCATCCTCGACGAG
EY934429       <-- GGTACGAGAAAGTCGTTGGCATCCCAAACTCCATGACCATCCTCGACGAG
FD974840       <-- ..................................................
EV548845       --> GGTACGAGAAAGTCGTTGACATCCCAAACTCCATGACCATCCTCGACGAG
EY924489       --> GGTACGAGAAAGTCGTTGACATCCCAAACTCCATGAC.............
EY937885       --> GGTATGAGAAAGTCGTTGACATCCCAAACTCCATGACC............
FD971898       --> GGTACGAGAAAGTCGTTGACATCCCAAACTCCATGACCATCCTCGACGAG
FD988607       --> GGTACGAGAAAGTCGTTGACATCCCAAACTCCATGACCATCCTCGACGAG
FY453194       --> GGTACGAGAAAGTCGTTGACATCCCAAACTCCATGACCATCCTCGACGAG
FY432610       --> GGTACGAGAAAGTCGTTGACATCCCAAACTCCATGACCATCCTCGACGAG
FY438306       --> GGTACGAGAAAGTCGTTGACATCCCAAACTCCATGACCATCCTCGACGAG
FY432301       --> GGTACGAGAAAGTCGTTGACATCCCAAACTCCATGACCATCCTCGACGAG
EY938252       --> GGTACGAGAAAGTCGTTGGCATCCCAAACTCCATGACCATCCTCGACGAG
FD542195       --> GGTACGAGAAAGTCGTTGACATCCCAAACTCCATGACCATCCTCGACGAG
FD948848       --> GGTACGAGAAAGTCGTTGACATCCCAAACTCCATGACCATCCTCGACGAG
FD978640       --> ..................................................

               651    -    701
UN19345        --> CTCCTTCCCATATCGATCGAGATGGCAAAGAGGAACTTAACCGGGATCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544447       <-- CTCCTTCCGATATCCATCGAGATGGCAAAGAGGAACTTAACCGGGATCTA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD984476       <-- CTCCTTCCCATATCGATCGAGATGGCAAAGAGGAACTTAACCGGGATCTA  Raphanus raphanistrum subsp. landra
FD967907       <-- CTCCTTCCCATATCGATCGAGATGGCAAAGAGGAACTTAACCGGGATCTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD538326       <-- CTCCTTCCCATAT----CGAGATGGCAAAGAGGAACTTAACCGGGATCTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY920130       <-- CTCCTTCCCATATCGATCGAGATGGCAAAGAGGAACTTAACCGGGATCTA  Raphanus raphanistrum subsp. landra
EY934429       <-- CTCCTTCCCATATCGATCGAGATGGCAAAGAGGAACTTAACCGGGATCTA  Raphanus sativus cv Early Scarlet Globe
FD974840       <-- ............................gGAGGAACTTAACCGGGATTTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV548845       --> CTCCTTCCGATATCCATCGAGATGGCAAAGAGGAACTTAACCGGGATCTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY924489       --> ..................................................  Raphanus raphanistrum subsp. landra
EY937885       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD971898       --> CTCCTTCCCATATCGATCGAGATGGCAA-GAGGA-CTTAACCGGGATCTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD988607       --> CTCCTTCCCATATCGATCGAGATGGCAAAGAGGA-CTTAAC.........  Raphanus raphanistrum subsp. landra
FY453194       --> CTCCTTCCGATATCCATCGAGATGGCAAAGAGGAACTTAACCGGGATCTA  Raphanus sativus cv GSK3-1
FY432610       --> CTCCTTCCGATATCCATCGAGATGGCAAAGAGGAACTTAACCGGGATCTA  Raphanus sativus cv GSK3-1
FY438306       --> CTCCTTCCGATATCCATCGAGATGGCAAAGAGGAACTTAACCGGGATCTA  Raphanus sativus cv GSK3-1
FY432301       --> CTCCTTCCGATATCCATCGAGATGGCAAAGAGGAACTTAACCGGGATCTA  Raphanus sativus cv GSK3-1
EY938252       --> CTCCTTCCCATATCGATCGAGATGGCAAAGAGGAACTTAACCGGGATCTA  Raphanus sativus cv Early Scarlet Globe
FD542195       --> CTCCTTCCCATATCGA----GATGGCAAAGAGGAACTTAACCGGGATCTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD948848       --> CTCCTTCCCATATCGATCGAGATGGCAAAGAGGAACTTAACCGGGATCTA  Raphanus sativus cv Early Scarlet Globe
FD978640       --> ............................gGAGGAACTTAACCGGGATCTA  Raphanus raphanistrum subsp. raphanistrum (NY)

               701    -    751
UN19345        --> CAACTTCACAAACCCGGGTGTCGTGAGCCACAACGAGATCTTGGAGATGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544447       <-- CAACTTCACAAACCCGGGTGTCGTGAGCCACAACGAGATCTTGGAGATGT
FD984476       <-- CAACTTCA-AAACCCGGGTGTCGTGAGCCACAACGAGATCTTGGAGATGT
FD967907       <-- CAACTTCACAAACCCGGGTGTCGTGAGCCACAACGAGATCTTGGAGATGT
FD538326       <-- CAACTTCACAAACCCGGGTGTCGTGAGCCACAACGAGATCTTGGAGATGT
EY920130       <-- CAACTTCACAAACCCGGGTGTCGTGAGCCACAACGAGATCTTGGAGATGT
EY934429       <-- CAACTTCACAAACCCGGGTGTCGTGAGCCACAACGAGATCTTGGAGATGT
FD974840       <-- CGACTTCACAAACCCGGGTGTCGTGAGCCACAACGAGATCTTGGAGATGT
EV548845       --> CAACTTCACAAACCCGGGTGTCGTGAGCCACAACGAGATCTTGGAGATGT
EY924489       --> ..................................................
EY937885       --> ..................................................
FD971898       --> CA-CTTCACAAACCCGG-TGTCGTGAGC-ACAACGAGATCTTGGAGATGT
FD988607       --> ..................................................
FY453194       --> CAACTTCACAAACCCGGGTGTCGTGAGCCACAACGAGATCTTGGAGATGT
FY432610       --> CAACTTCACAAACCCGGGTGTCGTGAGCCACAACGAGATCTTGGAGATGT
FY438306       --> CAACTTCACAAACCCGGGTGTCGTGAGCCACAACGAGATCTTGGAGATGT
FY432301       --> CAACTTCACAAACCCGGGTGTCGTGAGCCACAACGAGATCTTGGAGATGT
EY938252       --> CAACTTCACAAACCCGGGTGTCGTGAGCCACAACGAGATCTTGGAGATGT
FD542195       --> CAACTTCACAAACCCGGGTGTCGTGAGCCACAACGAGATCTTGGAGATGT
FD948848       --> CAACTTCACAAACCCGGGTGTCGTGAGCCACAACGAGATCTTGGAGATGT
FD978640       --> CGACTTCACAAACCCGGGTGTCGTGAGCCACAACGAGATCTTGGAGATGT

               751    -    801
UN19345        --> ACAGAGAGTACATTGACCCGAGCTTCACCTGGAAGAACTTCACGTTGGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544447       <-- ACAGAGAGTACATTGACCCGAGCTTCACCTGGAAGAACTTCACGTTGGAG
FD984476       <-- ACAGAGAGTACATTGACCCGAGCTTCACCTGGAAGAACTTCACGTTGGAG
FD967907       <-- ACAGAGAGTACATTGACCCGAGCTTCACCTGGAAGAACTTCACGTTGGAG
FD538326       <-- ACAGAGAGTACATTGACCCGAGCTTCACCTGGAAGAACTTCACGTTGGAG
EY920130       <-- ACAGAGATTACATTGACCCGAGCTTCACCTGGAAGAACTTCACGTTGGAG
EY934429       <-- ACAGAGAGTACATTGACCCGAGCTTCACCTGGAAGAACTTCACGTTGGAG
FD974840       <-- ACAGAGAGTACATTGACCCGAGCTTCACCTGGAAGAACTTCACGCTGGTG
EV548845       --> ACAGAGAGTACATTGACCCGAGCTTCACCTGGAAGAACTTCACGTTGGAG
EY924489       --> ..................................................
EY937885       --> ..................................................
FD971898       --> ACAGAGAGTACATTG...................................
FD988607       --> ..................................................
FY453194       --> ACAGAGAGTACATTGACCCGAGCTTCACCTGGAAGAACTTCACGTTGGAG
FY432610       --> ACAGAGAGTACATTGACCCGAGCTTCACCTGGAAGAACTTCACGTTGGAG
FY438306       --> ACAGAGAGTACATTGACCCGAGCTTCACCTGGAAGAACTTCACGTTGGAG
FY432301       --> ACAGAGAGTACATTGACCCGAGCTTCACCTGGAAGAACTTCACGTTGGAG
EY938252       --> ACAGAGAGTACATTGACCCGAGCTTCACCTGGAAGAACTTCACGTTGGAG
FD542195       --> ACAGAGAGTACATTGACCCGAGCTTCACCTGGAAGAACTTCACGTTGGAG
FD948848       --> ACAGAGAGTACATTGACCCGAGCTTCACCTGGAAGAACTTCACGTTGGAG
FD978640       --> ACAGAGAGTACATTGACCCGAGCTTCACCTGGAAGAACTTCACGCTGGTG

               801    -    851
UN19345        --> GAACAAGCTAAAGTGATTGTGGCTCCAAGGAGTAACAACGAGCTCGATGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544447       <-- GAACAAGCTAAAGTGATTGTGGCTCCAAGGAGTAACAACGAGCTCGATGC
FD984476       <-- GAACAAGCTAAAGTGATTGTGGCTCCAAGGAGTAACAACGAGCTCGATGC
FD967907       <-- GAACAAGCTAAAGTGATTGTGGCTCCAAGGAGTAACAACGAGCTCGATGC
FD538326       <-- GAACAAGCTAAAGTGATTGTGGCTCCAAGGAGTAACAACGAGCTCGATGC
EY920130       <-- GAACAAGCTAAAGTGATTGTGGCTCCAAGGAGTAACAACGAGCTCGATGC
EY934429       <-- GAACAAGCTAAAGTGATTGTGGCTCCAAGGAGTAACAACGAGCTCGATGC
FD974840       <-- GAACAAGCTAAAGTGATTGTGGCTCCAAGGAGTAACAACGAGCTCGATGC
EV548845       --> GA-CAAGCTAAAGTGATTGTGGCTC.........................
EY924489       --> ..................................................
EY937885       --> ..................................................
FD971898       --> ..................................................
FD988607       --> ..................................................
FY453194       --> GAACAAGCTAAAGTGATTGTGGCTCCAAGGAGTAACAACGAGCTCGATGC
FY432610       --> GAACAAGCTAAAGTGATTGTGGCTCCAAGGAGTAACAACGAGCTCGATGC
FY438306       --> GAACAAGCTAAAGTGATTGTGGCTCCAAGGAGTAACAACGAGCTCGATGC
FY432301       --> GAACAAGCTAAAGTGATTGTGGCTCCAAGGAGTAACAACGAGCTCGATGC
EY938252       --> GAACAAGCTAAAGTGATTGTGGCTCCAAGGAGTAACAACGAGCTCGATGC
FD542195       --> GAACAAGCTAAAGTGATTGTGGCTCCAAGGAGTAACAACGAGCTCGATGC
FD948848       --> GAACAAGCTAAAGTGATTGTGGCTCCAAGGAGTAACAACGAGCTCGATGC
FD978640       --> GAACAAGCTAAAGTGATTGTGGCTCCAAGGAGTAACAACGAGCTCGATGC

               851    -    901
UN19345        --> CACTAAGTTGAAGACTGAGTTCCCTGAGATGTTGTCTATCAAAGAATCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544447       <-- CACTAAGTTGAAGACTGAGTTCCCTGAGATGTTGTCTATCAAAGAATCTC
FD984476       <-- CACTAAGTTGAAGACTGAGTTCCCTGAGATGTTGTCTATCAAAGAATCTC
FD967907       <-- TACTAAGTTGAAGACTGAGTTCCCTGAGATGTTGTCTATCAAAGAATCTC
FD538326       <-- TACTAAGTTGAAGACTGAGTTCCCTGAGATGTTGTCTATCAAAGAATCTC
EY920130       <-- CACTAAGTTGAAGACTGAGTTCCCTGAGATGTTGTCTATCAAAGAATCTC
EY934429       <-- CACTAAGTTGAAGACTGAGTTCCCTGAGATGTTGTCTATCAAAGAATCTC
FD974840       <-- CACTAAGTTGAGGACTGAGTTCCCTGAGATGTTGTCTATCAAAGAATCTC
EV548845       --> ..................................................
EY924489       --> ..................................................
EY937885       --> ..................................................
FD971898       --> ..................................................
FD988607       --> ..................................................
FY453194       --> CACTAAGTTGAAGACTGAGTTCCCTGAGATGTTGTCTA............
FY432610       --> CACT..............................................
FY438306       --> CACTAAGTTGAAGACTGAGTTCCCTGAGATGTTGTCTATC..........
FY432301       --> CACTAAGTTGAAGACTGAGTTCCCTGAGATGTTGTCTATCAAAGAATCTC
EY938252       --> CACTAAGTTGAAGACTGAGTTCCCTGAGATGTTGTCTATCAAAGAATCTC
FD542195       --> TACTAAGTTGAAGACTGAGTTCCCTGAGATGTTGTCTATCAAAGAATCTC
FD948848       --> CACTAAGTTGAAGACTGAGTTCCCTGAGATGTTGTCTATCAAAGAATCTC
FD978640       --> CACTAAGTTGAGGACTGAGTTCCCTGAGATGTTGTCTATCAAAGAATCTC

               901    -    951
UN19345        --> TGATCAAGTTTGTGTTTGAGCCAAACAAGAAGACTGGAGTTAAAGCTTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544447       <-- TGATCAAGTTTGTGTTTGAGCCAAACAAGAAGACTGGAGTTAAAGCTTAA
FD984476       <-- TGATCAAGTTTGTGTTTGAGCCAAACAAGAAGACTGGAGTTAAAGCTTAA
FD967907       <-- TGATCAAGTTTGTGTTTGAGCCAAACAAGAAGACTGGAGTTAAAGCTTAA
FD538326       <-- TGATCAAGTTTGTGTTTGAGCCAAACAAGAAGACTGGAGTTAAAGCTTAA
EY920130       <-- TGATCAAGTTTGTGTTTGAGCCAAACAAGAAGACTGGAGTTAAAGCTTAA
EY934429       <-- TGATCAAGTTTGTGTTTGAGCCAAACAAGAAGACTGGAGTTAAAGCTTAA
FD974840       <-- TGATCAAGTTTGTGTTTGAGCCAAACAAGAAGACTGGAGTTAAAGCTTAA
EV548845       --> ..................................................
EY924489       --> ..................................................
EY937885       --> ..................................................
FD971898       --> ..................................................
FD988607       --> ..................................................
FY453194       --> ..................................................
FY432610       --> ..................................................
FY438306       --> ..................................................
FY432301       --> TGATCAAGTTTGTGTTTG................................
EY938252       --> TGATCAAGTTTGTGTTTGAGCCAAACAAGAAGACTGGAGTTAAAGCTTAA
FD542195       --> TGATCAAGTTTGTGTTTGAGCCAAACAAGAAGACTGGAGTTAAAGCTTAA
FD948848       --> TGATCAAGTTTGTGTTTGAGCCAAACAAGAAGACTGGAGTTAAAGCTTAA
FD978640       --> TGATCAAGTTTGTGTTTGAGCCAAACAAGAAGACTGGAGTTAAAGCTTAA

               951    -   1001
UN19345        --> GATGCTGCCAAAGTGTGTTCTTTGTTAAGGT--AACGGTCCTAAACACTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544447       <-- GATGCTGCCAAAGTGT-TCTTTTGTTAAGGT--AACGGTCCTAAACACTA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD984476       <-- GATGCTGCCAAAGTGTGTTCTTTGTTAAGGT--AACGGTCCTAAACACTA  Raphanus raphanistrum subsp. landra
FD967907       <-- GATGCTGCCAAAGTGTGTTCTTTGTTAAGGTGTAACGGTCCTAAACACTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD538326       <-- GATGCTGCCAAAGTGTGTTCTTTGTTAAGGTGTAACAGTCCTAAACACTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY920130       <-- GATGCTGCCAAAGTGTGTTCTTTGTTAAGGT--AACGGTCCTAAACACTA  Raphanus raphanistrum subsp. landra
EY934429       <-- GATGCTGCCAAAGTGT-TCTTTTGTTAAGGT--AACGGTCCTAAACACTA  Raphanus sativus cv Early Scarlet Globe
FD974840       <-- GATGCTGCCAAAGTGTGTTCTTTGTTAAGGT--AACGGTCCTAAACACTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV548845       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY924489       --> ..................................................  Raphanus raphanistrum subsp. landra
EY937885       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD971898       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD988607       --> ..................................................  Raphanus raphanistrum subsp. landra
FY453194       --> ..................................................  Raphanus sativus cv GSK3-1
FY432610       --> ..................................................  Raphanus sativus cv GSK3-1
FY438306       --> ..................................................  Raphanus sativus cv GSK3-1
FY432301       --> ..................................................  Raphanus sativus cv GSK3-1
EY938252       --> GATGCTGCCAAAGTGT-TCTTTTGTTAAG-T--AACGGTCCTAAACACTA  Raphanus sativus cv Early Scarlet Globe
FD542195       --> GATGCTGCCAAAGTGTGTTCTTTGT.........................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD948848       --> GATGCTGCCAAAGTGT-TCTTTTGTTAAGGT--AACGGTCCTAAACACTA  Raphanus sativus cv Early Scarlet Globe
FD978640       --> GATGCTGCCAAAGTGTGTTCTTTGTTAAGGT--AACGGTCCTAAACACTA  Raphanus raphanistrum subsp. raphanistrum (NY)

               1001   -   1051
UN19345        --> AAAACAAATATCAAACCAAAACAAAGTTGTTGGGGGTTTTT-ATAAATTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544447       <-- AAAACAA-TATCAAACCAAAAGAAAGTTGTTGGGG-TTTCT-ATAAATTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD984476       <-- AAAACAAATATCAAACCAAAACAAAGTTGTTGGGGGTTTTT-ATAAATTT  Raphanus raphanistrum subsp. landra
FD967907       <-- AAAACAAATATCAAACCAAAACAAAGTTGTTGGGGGTTTTTTATAAATTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD538326       <-- AAAACAAATATCAAACCAAAACAAAGTTGTTGGGGGTTTTTTATAAATTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY920130       <-- AAAACAAATATCAAACCAAAACAAAGTTGTTGGGGGTTTTT-ATAAATTT  Raphanus raphanistrum subsp. landra
EY934429       <-- AAAACAA-TATCAAACCAAAAGAAAGTTGTTGGGG-TTTCT-ATTAATTT  Raphanus sativus cv Early Scarlet Globe
FD974840       <-- AAAACAAATATCAAACCAAAACAAAGTTGTTGGTGGTTTTT-ATAAATTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV548845       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY924489       --> ..................................................  Raphanus raphanistrum subsp. landra
EY937885       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD971898       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD988607       --> ..................................................  Raphanus raphanistrum subsp. landra
FY453194       --> ..................................................  Raphanus sativus cv GSK3-1
FY432610       --> ..................................................  Raphanus sativus cv GSK3-1
FY438306       --> ..................................................  Raphanus sativus cv GSK3-1
FY432301       --> ..................................................  Raphanus sativus cv GSK3-1
EY938252       --> AAAACAA-TATCAAACCAAAAGAAAGTTGTTGGGG-TTTCT-ATTAATTT  Raphanus sativus cv Early Scarlet Globe
FD542195       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD948848       --> AAAACAA-TATCAAACCACAAGAAAGTTGTTGGGG-TTTCT-ATTAATTT  Raphanus sativus cv Early Scarlet Globe
FD978640       --> AAAACAAATATCAAACCAAAACAAAGTTGTTGGTGGTTTTT-ATAAATTT  Raphanus raphanistrum subsp. raphanistrum (NY)

               1051   -   1101
UN19345        --> TAGTGTTTATGATGGCCTAAAGAAATTGT-TGTGT-TTTTTTGTATTTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544447       <-- TAGTGTTTA---TGGCCTAAAGAAATTGT-TGTGTGTTTTTTGTATTTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD984476       <-- TAGTGTTTATGATGGCCTAAAGAAATTGT-TGTGT-TTTTTTGTATTTTC  Raphanus raphanistrum subsp. landra
FD967907       <-- TAGTGTTTATGATGGCCTAAAGAAATTAT-TGTGT-TTTTT-GTATTTTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD538326       <-- TAGTGTTTATGATGGCCTAAAGAAATTAT-TGTGT-TTTTT-GTATTTTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY920130       <-- TAGTGTTTATGATGGCCTAAAGAAATTGT-TGTGT-TTTTTTGTATTTTC  Raphanus raphanistrum subsp. landra
EY934429       <-- TAGTGTTTA---TGGCCTAAAGAAATTGT-TGTGTGTTTTTTGTATTTTC  Raphanus sativus cv Early Scarlet Globe
FD974840       <-- TAGTGTTTATGATGGCCTAAAGAAATCGT-TGTGT-TTTTTTGTATTTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV548845       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY924489       --> ..................................................  Raphanus raphanistrum subsp. landra
EY937885       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD971898       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD988607       --> ..................................................  Raphanus raphanistrum subsp. landra
FY453194       --> ..................................................  Raphanus sativus cv GSK3-1
FY432610       --> ..................................................  Raphanus sativus cv GSK3-1
FY438306       --> ..................................................  Raphanus sativus cv GSK3-1
FY432301       --> ..................................................  Raphanus sativus cv GSK3-1
EY938252       --> TAGTGTTTATG---GCCTAAAGAAATTGTGTGTGT-T.............  Raphanus sativus cv Early Scarlet Globe
FD542195       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD948848       --> TAGTGTTTATG---GCCTAAAGAAATTGT-TGTGTGTTTTTTGTATTTTC  Raphanus sativus cv Early Scarlet Globe
FD978640       --> TAGTGTTTATGATGGCCTAAAGAAATCGT-TGTGT-TTTTTTGTATTTTC  Raphanus raphanistrum subsp. raphanistrum (NY)

               1101   -   1151
UN19345        --> TTGTTTCCTTCATCCAATGTTGTTGTATTGTTTAAATAAACCTTTTTGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544447       <-- TTGTTTCCTTCTTCCAATGTTGTTGTATTGTTTAAATAAACCTT--TGTT
FD984476       <-- TTGTTTCCTTCATCCAATGTTGTTGTATTGTTTAAAT.............
FD967907       <-- TTGTTTCCTTCATCCAATGTTGTTGTATTGTTTAAATAAACCTTTTTGTT
FD538326       <-- TTGTTTCCTTCATCCAATGTTGTTGTATTGTTTAAAT.............
EY920130       <-- TTGTTTCCTTCATCCAATGTTGTTGTATTGTTTAAATAAACCTTTTT...
EY934429       <-- TTGTTTCCTTCTTCCAATGTTGTTGTATTGTTTAAATAAACCTTTTT...
FD974840       <-- TTGTTTCCTTCATCCAATGTTGTTGTATTGTTTAAATAAACCTTTTT...
EV548845       --> ..................................................
EY924489       --> ..................................................
EY937885       --> ..................................................
FD971898       --> ..................................................
FD988607       --> ..................................................
FY453194       --> ..................................................
FY432610       --> ..................................................
FY438306       --> ..................................................
FY432301       --> ..................................................
EY938252       --> ..................................................
FD542195       --> ..................................................
FD948848       --> TTGTTTCCTTCTTCCAATGTTGTTGTATTGTTTAAATAAACCTTTTT...
FD978640       --> TTGTTTCCTTCATCCAATGTTGTTGTATTGTTTAAATAAACCTTTTT...

               1151   -   1201
UN19345        --> ACAAATAAAAATGTATCGTTTGCATTTTCCTTGTCCTTTAAGTTAAAATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544447       <-- ACAAATAAAAATGTATCATTTGCATTTTCCTTATCCTATAAGTTAAAATA
FD984476       <-- ..................................................
FD967907       <-- ACAAATAAAAATGTATCGGTTGCATTTTCCTTGTCCTTTAAGTTAAAATA
FD538326       <-- ..................................................
EY920130       <-- ..................................................
EY934429       <-- ..................................................
FD974840       <-- ..................................................
EV548845       --> ..................................................
EY924489       --> ..................................................
EY937885       --> ..................................................
FD971898       --> ..................................................
FD988607       --> ..................................................
FY453194       --> ..................................................
FY432610       --> ..................................................
FY438306       --> ..................................................
FY432301       --> ..................................................
EY938252       --> ..................................................
FD542195       --> ..................................................
FD948848       --> ..................................................
FD978640       --> ..................................................

               1201   -   1251
UN19345        --> ATTATATTAAGCTTTGTTAATT
                   ~~~~~~~~~~~~~~~~~~~~~~
EV544447       <-- gtt...................
FD984476       <-- ......................
FD967907       <-- ATTATATTAAGCTTTGTTAATT
FD538326       <-- ......................
EY920130       <-- ......................
EY934429       <-- ......................
FD974840       <-- ......................
EV548845       --> ......................
EY924489       --> ......................
EY937885       --> ......................
FD971898       --> ......................
FD988607       --> ......................
FY453194       --> ......................
FY432610       --> ......................
FY438306       --> ......................
FY432301       --> ......................
EY938252       --> ......................
FD542195       --> ......................
FD948848       --> ......................
FD978640       --> ......................