Library    |     Search    |     Batch query    |     SNP    |     SSR  

Alignment for radish unigene UN19362

               1      -     51
UN19362        --> GGGTTTTCCACTTAGCGTTTCCATGGCGGCGGTTATCGGAAACGTGGCGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD974349       <-- ..................................................
EW730707       <-- ..................................................
EW728207       <-- ..................................................
EV531120       <-- ..................................................
FD978032       --> GGGTTTTCCACTTAGCGTTTCCATGGCGGCGGTTATCGGAAACGTGGCGC
EV526710       --> ..................................................
FD973910       --> ..................................................
EW723190       --> ..................................................

               51     -    101
UN19362        --> TGTTACTCGACGTCAACTCTCACCGTACGGTGGTCACTGATCGGAGAATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD974349       <-- ..................................................
EW730707       <-- ..................................................
EW728207       <-- ..................................................
EV531120       <-- ..................................................
FD978032       --> TGTTACTCGACGTCAACTCTCACCGTACGGTGGTCACTGATCGGAGAATT
EV526710       --> ..................................................
FD973910       --> ..................................................
EW723190       --> ..................................................

               101    -    151
UN19362        --> CGCTTGGCGGTTGTCGACGTCGTCCTGAATCTACCGAAGAGAGACTCATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD974349       <-- ..................................................
EW730707       <-- ..................................................
EW728207       <-- ..................................................
EV531120       <-- ..................................................
FD978032       --> CGCTTGGCGGTTGTCGACGTCGTCCTGAATCTACCGAAGAGAGACTCATC
EV526710       --> ..................................................
FD973910       --> ..................................................
EW723190       --> ..................................................

               151    -    201
UN19362        --> GCACGGTTACGTTTCTTCTCACTACGCGTCTCTCTCATCAAACAAGCCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD974349       <-- ..................................................
EW730707       <-- ..................................................
EW728207       <-- ..................................................
EV531120       <-- ..................................................
FD978032       --> GCACGGTTACGTTTCTTCTCACTACGCGTCTCTCTCATCAAACAAGCCTC
EV526710       --> ..................................................
FD973910       --> ..................................................
EW723190       --> ..................................................

               201    -    251
UN19362        --> TTGAATCTGACGGAGAGGCTCGGAGTCGCCGGTTTCTGACTCGCGGAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD974349       <-- ..................................................
EW730707       <-- ..................................................
EW728207       <-- ..................................................
EV531120       <-- ..................................................
FD978032       --> TTGAATCTGACGGAGAGGCTCGGAGTCGCCGGTTTCTGACTCGCGGAAAG
EV526710       --> ..................................................
FD973910       --> ..................................................
EW723190       --> ..................................................

               251    -    301
UN19362        --> GCGAAATCAAGGGCTAACGTCGTGGATTACGACGAGGCCGGATCCAGCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD974349       <-- ..................................................
EW730707       <-- ..................................................
EW728207       <-- ..................................................
EV531120       <-- ..................................................
FD978032       --> GCGAAATCAAGGGCTAACGTCGTGGATTACGACGAGGCCGGATCCAGCGA
EV526710       --> ..................................................
FD973910       --> ..................................................
EW723190       --> ..................................................

               301    -    351
UN19362        --> CGAGGGTGAGGGGAAGGAGAGTGATGACGAAGAAGATGAAGAAGCGTACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD974349       <-- ..................................................
EW730707       <-- ..................................................
EW728207       <-- ..................................................
EV531120       <-- ..................................................
FD978032       --> CGAGGGTGAGGGGAAGGAGAGTGATGACGAAGAAGATGAAGAAGCGTACG
EV526710       --> .................................................G
FD973910       --> ..................................................
EW723190       --> ..................................................

               351    -    401
UN19362        --> ATGTTGAGAAGGAGATGAAGAGGAGAGCTAAGGAGCTGCAGGATATGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD974349       <-- ................GAAGAG-AGAGCTAAGGAGCTGCAGGATATGAAG
EW730707       <-- ..................................................
EW728207       <-- ..................................................
EV531120       <-- ..................................................
FD978032       --> ATGTTGAGAAGGAGATGAAGAGGAGAGCTAAGGAGCTGCAGGATATGAAG
EV526710       --> ATGTGGAGAAGGAGATGAAGAGGAGAGCTAAGGAGTTGCAGGATATGAAT
FD973910       --> ..................................................
EW723190       --> ..................................................

               401    -    451
UN19362        --> GAGCTTGAGAGGAAAGCAGAGGAGTTGCAGTATAAGATTGATGAAGAAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD974349       <-- GAGCTTGAGAG-AAAGCAGAGGAGT-GCAGTATAAGATTGATGAAGAAGG
EW730707       <-- ..................................................
EW728207       <-- ..................................................
EV531120       <-- ..................................................
FD978032       --> GAGCTTGAGAGGAAAGCAGAGGAGTTGCAGTATAAGATTGATGAAGAAGG
EV526710       --> GAGCTTGAGAGGAAAGCAGAGGAGTTGCAGTATAAGATTGATGAAGAAGG
FD973910       --> ..................................................
EW723190       --> ..................................................

               451    -    501
UN19362        --> TGGTGATGATGATTCAGAGGAGAAGAAGAGGATGAGGGTGAAACGAGAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD974349       <-- TGGTGATGATGATTCAGAGGAGAAGAAGAGGATGAGGGTGAAACGAGAGC
EW730707       <-- .gacGATGATGATTCAGAG-AGAAGAAGAGGATGAGGGTGAAACGAGAGC
EW728207       <-- ..................................................
EV531120       <-- ..................................................
FD978032       --> TGGTGATGATGATTCAGAGGAGAAGAAGAGGATGAGGGTGAAACGAGAGC
EV526710       --> TG---ATGATGATTCAGAGGAGAAGAAGAGGATGAGGGTGAAAAGAGAGC
FD973910       --> ...........................................gGAGAGC
EW723190       --> ..................................................

               501    -    551
UN19362        --> TCGAAAAGGTAGCTCAGGAGCAAGCAGAGAGGAGAGCAACTGCGGAATTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD974349       <-- TCGAAAAGGTAGCTCAGGAGCAAGCAGAGAGGAGAGCAACTGCGGAATTG
EW730707       <-- TCGAAAAGGTAGCTCAGGAGCAAGCAGAGAGGAGAGCAACTGCGGAATTG
EW728207       <-- ...............gGGAGCAAGCAGAGAGGAGAGCAACTGCGGAATTG
EV531120       <-- ..................................................
FD978032       --> TCGAAAAGGTAGCTCAGGAGCAAGCAGAGAGGAGAGCAACTGCGGAATTG
EV526710       --> TCGAAAAGGTAGCTCAAGAGCAAGCAGAGAGGAGAGCAACTGCGGAATTG
FD973910       --> TCGAAAAGGTAGCTCAGGAGCAAGCAGAGAGGAGAGCAACTGCAGAACTG
EW723190       --> ...............gGGAGCAAGCAGAGAGGAGAGCAACTGCGGAATTG

               551    -    601
UN19362        --> ATGTTTGAGTTGGGACAAAAGGCTTATGGTAAAGGCATGTATGGACGAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD974349       <-- ATGTTTGAGTTGGGACAAAAGGCTTATGGTAAAGGCATGTATGGACGAGC
EW730707       <-- ATGTTTGAGCTGGGACAAAAGGCTTATGGTAAAGGCATGTATGGACGAGC
EW728207       <-- ATGTTTGAGTTGGGACAAAAGGCTTATGGTAAAGGCATGTATGGACGAGC
EV531120       <-- ..................................................
FD978032       --> ATGTTTGAGTTGGGACAAAAGGCTTATGGTAAAGGCATGTATGGACGAGC
EV526710       --> ATGTTTGAGTTGGGACAAAAGGCTTATGGTAAAGGCATGTATGGACGAGC
FD973910       --> ATGTTTGAGTTGGGACAAAAGGCTTATGGTAAAGGCATGTATGGACGAGC
EW723190       --> ATGTTTGAGTTGGGACAAAAGGCTTATGGTAAAGGCATGTATGGACGAGC

               601    -    651
UN19362        --> GATTGAGTTTCTTGAAGGAGCTCTTACTATTATCCCAAGGCCAACGCTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD974349       <-- GATTGAGTTTCTTGAAGGAGCTCTTACTATTATCCCAAGGCCAACGCTCT
EW730707       <-- GATTGAGTTTCTTGAAGGAGCTCTTACTATTATCCCAAGGCCAACGCTCT
EW728207       <-- GATTGAGTTTCTTGAAGGAGCTCTTACTATTATCCCAAGGCCAACGCTCT
EV531120       <-- ........................TACTATTATCCCAAGGCCAACGCTCT
FD978032       --> GATTGAGTTTCTTGAAGGAGCTCTTACTATTATC................
EV526710       --> GATTGAGTTTCTTGAAGGAGCTCTTACTATTATCCCAAGGCCAACGCTCT
FD973910       --> AATTGAGTTTCTTGAAGGAGCTCTTACTATTATCCCAAGGCCAACGCTTT
EW723190       --> GATTGAGTTTCTTGAAGGAGCTCTTACTATTATCCCAAGGCCAACGCTCT

               651    -    701
UN19362        --> TTGGTGGTGAGATTCAAATTTGGTTAGCTATGGCATATGAGGCCAATAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD974349       <-- TTGGTGGTGAGATTCAAATTTAGTTAGCTATGGCATATGAGGCCAATAAT
EW730707       <-- TTGGTGGTGAGATTCAAATTTGGTTAGCTATAGCATATGAGGCCAATAAT
EW728207       <-- TTGGTGGTGAGATTCAAATTTGGTTAGCTATGGCATATGAGGCCAATAAT
EV531120       <-- TTGGTGGTGAGATTCAAATTTGGTTAGCTATGGCATATGAGGCCAATAAT
FD978032       --> ..................................................
EV526710       --> TTGGTGGTGAGATTCAAATTTGGTTAGCTATGGCATATGAGGCCAATAAT
FD973910       --> TTGGTGGTGAGATTCAAATTTGGTTAGCTATGGCATATGAGGCCAATAAT
EW723190       --> TTGGTGGTGAGATTCAAATTTGGTTAGCTATGGCATATGAGGCCAATAAT

               701    -    751
UN19362        --> CGCCACGCTGATTGCATTGATCTTTATCAGCAACTAGAGAAGAGACACCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD974349       <-- CGCCACGCTGATTGCATTGATCTTTATCAGCAACTAGAGAAGAGACACCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW730707       <-- CGCCACGCTGATTGCATTGATCTTTATCAGCAATTAGAGAAGAGACACCC  Raphanus sativus cv Early Scarlet Globe
EW728207       <-- CGCCACGCTGATTGCATTGATCTTTATCAGCAATTAGAGAAGAGACACCC  Raphanus sativus cv Early Scarlet Globe
EV531120       <-- CGCCACGCTGATTGCATTGATCTGTATCAGCAACTAGAGAAGAGACACCC  Raphanus raphanistrum subsp. maritimus
FD978032       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV526710       --> CGCCACGCTGATTGCATTGATCTGTATCAGCAACTAGAGAAGAGACACCC  Raphanus raphanistrum subsp. maritimus
FD973910       --> CGCCACGCTGATTGCATTGATCTTTATCAGCAACTAGAGAAGAGACACCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EW723190       --> CGCCACGCTGATTGCATTGATCTTTATCAGCAATTAGAGAAGAGACACCC  Raphanus sativus cv Early Scarlet Globe

               751    -    801
UN19362        --> GAGTCCTGGTATCCGTCGTCAAGCTTCTGAGCTTAGGTATATCTTGCAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD974349       <-- CAGTCCTGGTATCCGTCGTCAAGCTTCTGAGCTTAGGTATATCTTGCAAG
EW730707       <-- GAGTCCTGGTATCCGTCGTCAAGCTTTTGAGCTTAGGTATATCTTGCAAG
EW728207       <-- GAGTCCTGGTATCCGTCGTCAAGCTTCTGAGCTTAGGTATATCTTGCAAG
EV531120       <-- GAGTCCTGGTATCCGTCGTCAAGCCTCTGAGCTTAGGTATATCTTGCAAG
FD978032       --> ..................................................
EV526710       --> GAGTCCTGGTATCCGTCGTCAAGCCTCTGAGCTTAGGTATATCTTGCAAG
FD973910       --> GAGTCCTGGTATCCGTCGTCAAGCTTCTGAGCTTAGGTATATCTTGCAAG
EW723190       --> GAGTCCTGGTATCCGTCGTCAAGCTTCTGAGCTTAGGTATATCTTGCAAG

               801    -    851
UN19362        --> CTCCTAAGCTCAAGATCTCTCAGGAGGAAATGGTTACCATACCCATGATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD974349       <-- CTCCTAAGCTCAAGATCTCCCAGGAGGAGATGGTTACCATACCCATGATC
EW730707       <-- CTCCTAAGCTCAAGATCTCTCAGGAGGAAATGGTTACCATACCCATGATC
EW728207       <-- CTCCTAAGCTCAAGATCTCTCAGGAGGAAATGGTTACCATACCCATGATC
EV531120       <-- CTCCTAAGCTCAAGATCTCTCAGGAGGAAATGGTTACCATACCCATGATC
FD978032       --> ..................................................
EV526710       --> CTCCTAAGCTCAAGATCTCTCAGGAGGAAATGGTTACCATACCCATGATC
FD973910       --> CTCCTAAGCTCAAGATCTCTCAGGAGGAGATGGTTACCATACCCATGATC
EW723190       --> CTCCTAAGCTCAAGATCTCTCAGGAGGAAATGGTTACCATACCCATGATC

               851    -    901
UN19362        --> GGTTCAAGCTACGACAGCTATGCAGTGACATGGAGTGACAAGGAGAGGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD974349       <-- GGTTCAAGCTACGACAGCTATGCAGTGACATGGAGTGACAAGGAGAGGGA
EW730707       <-- GGTTCAAGCTACGACAGCTATGCAGTGACATGGAGTGACAAGGAGAGGGA
EW728207       <-- GGTTCAAGCTACGACAGCTATGCAGTGACATGGAGTGACAAGGAGAGGGA
EV531120       <-- GGTTCAAGCTACGACAGCTATGCAGTGACATGGAGTGACAAGGAGAGGGA
FD978032       --> ..................................................
EV526710       --> GGTTCAAGCTACGACAGCTATGCAGTGACATGGAGTGACAAGGAGAGGGA
FD973910       --> GGTTCAAGCTACGACAGCTATGCAGTGACATGGAGTGACAAGGAGAGGGA
EW723190       --> GGTTCAAGCTACGACAGCTATGCAGTGACATGGAGTGACAAGGAGAGGGA

               901    -    951
UN19362        --> CAAGGACAGGAGGATGAATGAATCGACTACGAATCAGCTCAACTCGAGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD974349       <-- CAGGGACAGGAGAATGAATGAATCGACTACGAATCAGCTCAACTCGAGTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW730707       <-- CAAGGACAGGAGGATGAATGAATCGACTACGAATCAGCTCAACTCGAGTG  Raphanus sativus cv Early Scarlet Globe
EW728207       <-- CAAGGACAGGAGGATGAATGAATCGACTACGAATCAGCTCAACTCGAGTG  Raphanus sativus cv Early Scarlet Globe
EV531120       <-- CAAGGACAGGAGAATGAATGAATCGACTACGAATCAGCTCAACTCGAGTG  Raphanus raphanistrum subsp. maritimus
FD978032       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV526710       --> CAAGGACAGGAGAATGAATGAATCGACTACGAATCAGCTCAACTCGAGTG  Raphanus raphanistrum subsp. maritimus
FD973910       --> CAGAGACAGGAGGATGAATGAATCGACTACGAATCAGGTCGACTCGAGTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EW723190       --> CAAGGACAGGAGGATGAATGAATCGACTACGAATCAGCTCAACTCGAGTG  Raphanus sativus cv Early Scarlet Globe

               951    -   1001
UN19362        --> AAGACTTTCTAGGAAAGCTCTTGGTTTGGCGACCACCTGTCGGGATGGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD974349       <-- AAGACTTTCTAGGAGAGCTCTTGGTTTGGCGACCACCTGTCGGGATGGAG
EW730707       <-- AAGACTTTCTAGGAAAGCTCTTGGTTTGGCGACCACCTGTCGGGATGGAG
EW728207       <-- AAGACTTTCTAGGAAAGCTCTTGGTTTGGCGACCACCTGTCGGGATGGAG
EV531120       <-- AAGACTTTCTAGGAAAGCTCTTGGTTTGGCGACCACCTGTCGGGATGGAG
FD978032       --> ..................................................
EV526710       --> AAGACTTTCTAGGAAAGCTCTTGGTTTGGCGACCACCTGTCGGGATGGAG
FD973910       --> AAGACTTTCTAGGAAAGCTCTTGGTTTGGCGACCACCTGTCGGGATGGAG
EW723190       --> AAGACTTTCTAGGAAAGCTCTTGGTTTGGCGACCACCTGTCGGGATGGAG

               1001   -   1051
UN19362        --> AAGAACAAAGTCTTTTGGCTTTCTTTGACGCTGTGGTTTGGTTTAGTTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD974349       <-- AAGAACAAAGTCTTTTGGCTTTCTTTGACGCTGTGGTTTGGTTTAGTTGG
EW730707       <-- AAGAACAAAGTCTTTTGGCTTTCTTTGACGCTGTGGTTTGGTTTAGTTGG
EW728207       <-- AAGAACAAAGTCTTTTGGCTTTCTTTGACGCCGTGGTTTGGTTTAGTTGG
EV531120       <-- AAGAACAAAGTCTCTTGGCTTTCTTTGACGCTGTGGTTTGGTTTAGTTGG
FD978032       --> ..................................................
EV526710       --> AAGAACAAAGTCTCTTGGCTTTCTTTGACGCTGTGGTTTGGTTTAGTTGG
FD973910       --> AAGAACAAAGTCTTTTGGCTTTCTTTGACGCTGTGGTTTGGTTTAGTTGG
EW723190       --> AAGAACAAAGTCTTTTGGCTTTCTTTGACGCCGTGGTTTGGTTTAGTTGG

               1051   -   1101
UN19362        --> AGCAGCACTTTTGCTACAAAGATAAGTGAAAGAGGAGGAAAAGACTCTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD974349       <-- AGCAGCACTTTTGCTACAAAGATAAGTGAAAGAGGAGGAAAAGACTCTTT
EW730707       <-- AGCAGCACTTTTGCTACAAAGATAAGTGAAAGAGGAGGAAAAGACTCTTT
EW728207       <-- AGCAGCACTTTTGCTACAAAGATAAGTGAAAGAGGGGGAAAAGACTCTTT
EV531120       <-- AGCAGCACTTTTGCTACAAAGATAAGTGAAAGAGGAGGAAAAGACTCTTT
FD978032       --> ..................................................
EV526710       --> AGCAGCACTTTTGCTACAAAGATAAGTGAA....................
FD973910       --> AGCAGCACTTTTGCTACAAAGATAA-TGAAAGAGGAGGAAAAGACTCTTT
EW723190       --> AGCAGCACTTTTGCTACAAAGATAAGTGAAAGAGGGGGAAAAGACTCTTT

               1101   -   1151
UN19362        --> CGTCCCAGGTGTGGTACTGTTTCATCTCTCTCTCTCTCAC---TGTCTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD974349       <-- CTTCCCAGGTCTGGTACTGTTTCATCTCTCTCT-T-TCAC---TGTCTTG
EW730707       <-- CGTCCCAGGTGTGGTACTGTTTCATCTCTCTCTCTCCCAC---TGTCTTG
EW728207       <-- CGTCCCAGGTGTGGTACTGTTTCATCTCTCTCTCTCTCAC---TGTCTTG
EV531120       <-- CGTCCCAGGTGTGGTACTGTTTCATCTCTCTCTCTCTCAC---TGTCTTG
FD978032       --> ..................................................
EV526710       --> ..................................................
FD973910       --> CGTCCCAGGTCTGGTACTGTTTCATCTCTCTCTCTTTCACACTTGTCTTG
EW723190       --> CGTCCCAGGTGTGGTACTGTTTCATCTCTCTCTCTCTCAC---TGTCTTG

               1151   -   1201
UN19362        --> TAATTATATTTAAATACGGATGTATAAACTTGCAAGTAGATGTAATCATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD974349       <-- TAATTATATTTGAATACGGATGTATAAACTTGCAAGTAGATGTAATCATA
EW730707       <-- TAATTATATTTAAATACGGATGTATAAACTTGCAAGTAGATGTAATCATA
EW728207       <-- TAATTATATTTAAATACGGATGTATAAACTTGCAAGTAGATGTAATCATA
EV531120       <-- TAATTATATTTAAATACGGATGTATAAACTTGCAAGTAGATGTAATCATA
FD978032       --> ..................................................
EV526710       --> ..................................................
FD973910       --> TAATTATATTTGAATATGGATGTATAAACTTGCAAGTAGATGTAA.....
EW723190       --> TAATTATATTTAAATACGGATGTATAAACTTGCAAGTAGATGTAATCATA

               1201   -   1251
UN19362        --> TCTCATTGTAGATAAAAAAAGTGTTGGATGTCTGGAACTATATCACTTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD974349       <-- TCTCATTGTAGATAAAAAAAGTGTTGGATGTCTGGAACT...........
EW730707       <-- TCTCATTGTAGATAAAAAAAGTGTTGGATGTCTGGAACg...........
EW728207       <-- TCTCATTGTAGATAAAAAAAGTGTCGGATGTCTGGAACTATATCACTTTG
EV531120       <-- TCTCATTGTAGATAAAAAAAGTGTTGGATGTCTGGAACTATATCACTTTG
FD978032       --> ..................................................
EV526710       --> ..................................................
FD973910       --> ..................................................
EW723190       --> TCTCATTGTAGATAAAAAA-GTGTCGGATGTCTGGAACTATATCACTTTG

               1251   -   1301
UN19362        --> TTCTGTATTAGTATTGTACTGTAATTGTTTATTCAGAAAAAAAATTGTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD974349       <-- ..................................................
EW730707       <-- ..................................................
EW728207       <-- TTCTGTATTAGTATTGTACTGTAATTGTTTATTCA...............
EV531120       <-- TTCTGTATTAGTATTGTACTGTAATTGTTTATTCAGAAAAAAAATTGTTT
FD978032       --> ..................................................
EV526710       --> ..................................................
FD973910       --> ..................................................
EW723190       --> TTCTGTATTAGTATTGTACTGTAATTGTTTATTCA...............

               1301   -   1351
UN19362        --> ATTCAGTGATT
                   ~~~~~~~~~~~
FD974349       <-- ...........
EW730707       <-- ...........
EW728207       <-- ...........
EV531120       <-- ATTCAGTGATT
FD978032       --> ...........
EV526710       --> ...........
FD973910       --> ...........
EW723190       --> ...........