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Alignment for radish unigene UN19363

               1      -     51
UN19363        --> GGGAAGCAAAAGAAAAGTTCCCGAGCTGCTCTATAAACCTTTCTCCAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD986074       <-- ..................................................
FD555196       <-- ..................................................
FD574478       <-- ..................................................
FD988080       --> GGGAAGCAAAAGAAAAGTTCCCGAGCTGCTCTATAAACCTTTCTCCAACA
FY450865       --> ..................................................
FD990354       --> ..................................................
FY431417       --> ..................................................
FY431429       --> ..................................................
FD559804       --> ..................................................
EY921271       --> ..................................................
FD559498       --> ..................................................
FD570491       --> ..................................................
FD970834       --> ..................................................

               51     -    101
UN19363        --> ACGCAACAAGAGCAGCAGCAAAGCAAGCAAGAAGAAGAAAAATGTTCAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD986074       <-- ..................................................
FD555196       <-- ..................................................
FD574478       <-- ..................................................
FD988080       --> ACGCAACAAGAGCAGCAGCAAAGCAAGCAAGAAGAAGAAAAATGTTCAGG
FY450865       --> ..................CAAAGCAAG-AAGAAGAAGAAAA-TGTTCAGG
FD990354       --> .......................................AAATGTTCAGG
FY431417       --> .........................................ATGTTCAGG
FY431429       --> .........................................ATGTTCAGG
FD559804       --> ..................................................
EY921271       --> ..................................................
FD559498       --> ..................................................
FD570491       --> ..................................................
FD970834       --> ..................................................

               101    -    151
UN19363        --> AATCAGTACGACACGGACGTGACGACATGGAGCCCAACGGGCCGTCTCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD986074       <-- ..................................................
FD555196       <-- ..................................................
FD574478       <-- ..................................................
FD988080       --> AATCAGTACGACACGGACGTGACGACATGGAGCCCAACGGGCCGTCTCTT
FY450865       --> AATCAGTACGACACGGACGTGACGACATGGAGCCCAACGGGCCGTCTCTT
FD990354       --> AATCAGTACGACACGGACGTGACGACATGGAGCCCAACGGGCCGTCTCTT
FY431417       --> AATCAGTACGACACGGACGTGACGACATGGAGCCCAACGGGCCGTCTCTT
FY431429       --> AATCAGTACGACACGGACGTGACGACATGGAGCCCAACGGGCCGTCTCTT
FD559804       --> ..................................................
EY921271       --> ..................................................
FD559498       --> ..................................................
FD570491       --> ..................................................
FD970834       --> ..................................................

               151    -    201
UN19363        --> CCAAGTGGAATACGCCATGGAAGCAGTGAAGCAAGGCTCCGCCGCGATCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD986074       <-- ..................................................
FD555196       <-- ..................................................
FD574478       <-- ..................................................
FD988080       --> CCAAGTGGAATACGCCATGGAAGCAGTGAAGCAAGGCTCCGCGGCGATCG
FY450865       --> CCAAGTGGAATACGCCATGGAAGCAGTGAAGCAAGGCTCCGCCGCGATCG
FD990354       --> CCAAGTGGAATACGCCATGGAAGCAGTGAAGCAAGGCTCCGCGGCGATCG
FY431417       --> CCAAGTGGAATACGCCATGGAAGCAGTGAAGCAAGGCTCCGCCGCGATCG
FY431429       --> CCAAGTGGAATACGCCATGGAAGCAGTGAAGCAAGGCTCCGCCGCGATCG
FD559804       --> ..................................................
EY921271       --> ..................................................
FD559498       --> ..................................................
FD570491       --> ..................................................
FD970834       --> ..................................................

               201    -    251
UN19363        --> GACTCAGATCTCGCTCCCACGTCGTCCTCGCCTGCGTCAACAAGGCCCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD986074       <-- ..................................................
FD555196       <-- ..................................................
FD574478       <-- ..................................................
FD988080       --> GACTCAGATCTCGCTCCCATGTCGTCCTCGCCTGCGTCAACAAGGCCCAA
FY450865       --> GACTCAGATCTCGCTCCCACGTCGTCCTCGCCTGCGTCAACAAGGCCCAA
FD990354       --> GACTCAGATCTCGCTCCCATGTCGTCCTCGCCTGCGTCAACAAGGCCCAA
FY431417       --> GACTCAGATCTCGCTCCCACGTCGTCCTCGCCTGCGTCAACAAGGCCCAA
FY431429       --> GACTCAGATCTCGCTCCCACGTCGTCCTCGCCTGCGTCAACAAGGCCCAA
FD559804       --> ...........................gCGCCTGCGTCAACAAGGCCCAA
EY921271       --> ..................................................
FD559498       --> ..................................................
FD570491       --> ..................................................
FD970834       --> ..................................................

               251    -    301
UN19363        --> TCCGAGCTCTCCTCTCACCAGAAGAAGATCTTCAAAGTCGATGACCATAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD986074       <-- ..................................................
FD555196       <-- ..................................................
FD574478       <-- ..................................................
FD988080       --> TCCGAGCTCTCCTCTCACCAGAAGAAGATCTTCAAAGTCGATGATCATAT
FY450865       --> TCCGAGCTCTCCTCTCACCAGAAGAAGATCTTCAAAGTCGATGACCATAT
FD990354       --> TCCGAGCTCTCCTCTCA.................................
FY431417       --> TCCGAGCTCTCCTCTCACCAGAAGAAGATCTTCAAAGTCGATGACCATAT
FY431429       --> TCCGAGCTCTCCTCTCACCAGAAGAAGATCTTCAAAGTCGATGACCATAT
FD559804       --> TCCGAGCTCTCCTCTCACCAGAAGAAGATCTTCAAAGTCGATGATCATAT
EY921271       --> ..................................................
FD559498       --> ..................................................
FD570491       --> ..................................................
FD970834       --> ..................................................

               301    -    351
UN19363        --> TGGCGTCGCAATCGCCGGTCTCACCGCCGACGGCCGTGTTCTCTCTCGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD986074       <-- .....TCGCAATCGCCGGTCTCACCGCCGACGGCCGTGTTCTCTCCCGTT  Raphanus raphanistrum subsp. landra
FD555196       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD574478       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD988080       --> TGGCGTCGCAATCGCCGGTCTCACCGCCGACGGCCGTGTTCTCTCCCGTT  Raphanus raphanistrum subsp. landra
FY450865       --> TGGCGTCGCAATCGCCGGTCTCACCGCCGACGGCCGTGTTCTCTCTCGTT  Raphanus sativus cv GSK3-1
FD990354       --> ..................................................  Raphanus raphanistrum subsp. landra
FY431417       --> TGGCGTCGCAATCGCCGGTCTCACCGCCGACGGCCGTGTTCTCTCTCGTT  Raphanus sativus cv GSK3-1
FY431429       --> TGGCGTCGCAATCGCCGGTCTCACCGCCGACGGCCGTGTTCTCTCTCGTT  Raphanus sativus cv GSK3-1
FD559804       --> TGGCGTCGCAATCGCCGGTCTCACCGCCGACGGCCGTGTTCTCTCCCGTT  Raphanus raphanistrum subsp. landra
EY921271       --> ..................................................  Raphanus raphanistrum subsp. landra
FD559498       --> ..................................................  Raphanus raphanistrum subsp. landra
FD570491       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD970834       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               351    -    401
UN19363        --> ACATGAGATCGGAGGCTATCAATCACTCCTTCACCTATGAGTCTCCGCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD986074       <-- ACATGAGATCGGAGGCTATCAATCACTCCTTCACCTATGAGTCTCCGCTC
FD555196       <-- ...................gAATCACTCCTTCACCTATGAGTCTCCGCTC
FD574478       <-- ..................................................
FD988080       --> ACATGAGATCGGAGGCTATCAATCACTCCTTCACCTATGAGTCTCCGCTC
FY450865       --> ACATGAGATCGGAGGCTATCAATCACTCCTTCACCTATGAGTCTCCGCTC
FD990354       --> ..................................................
FY431417       --> ACATGAGATCGGAGGCTATCAATCACTCCTTCACCTATGAGTCTCCGCTC
FY431429       --> ACATGAGATCGGAGGCTATCAATCACTCCTTCACCTATGAGTCTCCGCTC
FD559804       --> ACATGAGATCGGAGGCTATCAATCACTCCTTCACCTATGAGTCTCCGCTC
EY921271       --> ..................gCAATCACTCCTTCACCTATGAGTCTCCGCTC
FD559498       --> ...................gAATCACTCCTTCACCTATGAGTCTCCGCTC
FD570491       --> ..................................................
FD970834       --> ..................................................

               401    -    451
UN19363        --> CCCGTCGGACGTCTCGTCGTTCATCTCGCTGATAAGGCCCAGGTCTGTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD986074       <-- CCCGTTGGACGTCTCGTCGTTCACCTCGCCGATAAGGCCCAGGTCTGTAC
FD555196       <-- CCCGTCGGACGTCTCGTCGTTCATCTCGCTGATAAGGCCCAGGTCTGTAC
FD574478       <-- ..................................................
FD988080       --> CCCGTTGGACATCTCGTCGTTCACCTCGCCGATAAGGCCCAGGTCTGTAC
FY450865       --> CCCGTCGGACGTCTCGTCGTTCATCTCGCTGATAAGGCCCAGGTCTGTAC
FD990354       --> ..................................................
FY431417       --> CCCGTCGGACGTCTCGTCGTTCATCTCGCTGATAAGGCCCAGGTCTGTAC
FY431429       --> CCCGTCGGACGTCTCGTCGTTCATCTCGCTGATAAGGCCCAGGTCTGTAC
FD559804       --> CCCGTTGGACGTCTCGTCGTTCACCTCGCCGATAAGGCCCAGGTCTGTAC
EY921271       --> CCCGTTGGACGTCTCGTCGTTCACCTCGCCGATAAGGCCCAGGTCTGTAC
FD559498       --> CCCGTCGGACGTCTCGTCGTTCATCTCGCTGATAAGGCCCAGGTCTGTAC
FD570491       --> ..................................................
FD970834       --> ..................................................

               451    -    501
UN19363        --> CCAGCGATCATGGAAACGTCCATATGGCGTGGGTTTGTTGGTAGGTGGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD986074       <-- CCAACGATCATGGAAACGTCCATATGGTGTGGGTTTGTTGGTAGGTGGAT
FD555196       <-- CCAGCGATCGTGGAAACGTCCATATGGCGTGGGTTTGTTGGTATGTGGAT
FD574478       <-- ..................................................
FD988080       --> CCAACGATCATGGAAACGTCCATATGGTGTGGGTTTGTTGGTAGGTGGAT
FY450865       --> CCAGCGATCATGGAAACGTCCATATGGCGTGGGTTTGTTGGTAGGTGGAT
FD990354       --> ..................................................
FY431417       --> CCAGCGATCATGGAAACGTCCATATGGCGTGGGTTTGTTGGTAGGTGGAT
FY431429       --> CCAGCGATCATGGAAACGTCCATATGGCGTGGGTTTGTTGGTAGGTGGAT
FD559804       --> CCAACGATCATGGAAACGTCCATATGGTGTGGGTTTGTTGGTAGGTGGAT
EY921271       --> CCAACGATCATGGAAACGTCCATATGGTGTGGGTTTGTTGGTAGGTGGAT
FD559498       --> CCAGCGATCGTGGAAACGTCCATATGGCGTGGGTTTGTTGGTATGTGGAT
FD570491       --> ..................................................
FD970834       --> ..................................................

               501    -    551
UN19363        --> TGGATGAGTCCGGAGCCCATCTTTACTACAACTGCCCAAGCGGAAACTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD986074       <-- TGGACGAGTCCGGAGCCCATCTTTACTACAACTGCCCAAGCGGAAACTAC
FD555196       <-- TGGATGAGTCCGGAGCCCATCTTTACTACAACTGCCCAAGCGGAAACTAC
FD574478       <-- ..................................................
FD988080       --> TGGACGAGTCCGGAGCCCATCTTTACTACAACTGCCCAAGCGGAAACTAC
FY450865       --> TGGATGAGTCCGGAGCCCATCTTTACTATAACTGCCCAAGCGGAAACTAC
FD990354       --> ..................................................
FY431417       --> TGGATGAGTCCGGAGCCCATCTTTACTATAACTGCCCAAGCGGAAACTAC
FY431429       --> TGGATGAGTCCGGAGCCCATCTTTACTATAACTGCCCAAGCGGAAACTAC
FD559804       --> TGGACGAGTCCGGAGCCCATCTTTACTACAACTGCCCAAGCGGAAACTAC
EY921271       --> TGGACGAGTCCGGAGCCCATCTTTACTACAACTGCCCAAGCGGAAACTAC
FD559498       --> TGGATGAGTCCGGAGCCCATCTTTACTACAACTGCCCAAGCGGAAACTAC
FD570491       --> ..................................................
FD970834       --> ..................................................

               551    -    601
UN19363        --> TTTGAGTATCAAGCTTTTGCTATCGGGTCCCGTTCTCAAGCCGCAAAGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD986074       <-- TTTGAGTATCAAGCTTTTGCTATCGGGTCCCGTTCTCAAGCCGCAAAGAC
FD555196       <-- TTTGAGTATCAAGCTTTTGCTATCGGGTCCCGTTCTCAAGCCGCAAAGAC
FD574478       <-- ..................................................
FD988080       --> TTTGAGTATCAAGCTTTTGCTATCGGGTCCCGTTCTCAAGCCGCAAAGAC
FY450865       --> TTTGAGTATCAAGCTTTTGCTATCGGGTCCCGTTCTCAAGCCGCAAAGAC
FD990354       --> ..................................................
FY431417       --> TTTGAGTATCAAGCTTTTGCTATCGGGTCCCGTTCTCAAGCCGCAAAGAC
FY431429       --> TTTGAGTATCAAGCTTTTGCTATCGGGTCCCGTTCTCAAGCCGCAAAGAC
FD559804       --> TTTGAGTATCAAGCTTTTGCTATCGGGTCCCGTTCTCAAGCCGCAAAGAC
EY921271       --> TTTGAGTATCAAGCTTTTGCTATCGGGTCCCGTTCTCAAGCCGCAAAGAC
FD559498       --> TTTGAGTATCAAGCTTTTGCTATCGGGTCCCGTTCTCAAGCCGCAAAGAC
FD570491       --> .......................gGGGTCCCGTTCTCAAGCCGCAAAGAC
FD970834       --> ..................................................

               601    -    651
UN19363        --> TTATCTGGAGCGTAGGTTTGAGAGCTTTGGGGATTCTTCAAAAGAAGATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD986074       <-- CTATTTGGAGCGTAGGTTTGAGAGCTTTGGGGATTCTTCAAAAGAAGATC
FD555196       <-- TTATCTGGAGCGTAGGTTTGAGAGCTTTGAGGATTCTTCAAAAGAAGATC
FD574478       <-- ......GGAGCGTAGGTTTGAGAGCTTTGGGGATTCTTCAAAAGAAGATC
FD988080       --> CTATCTGGAGCGTAGGTTTGAGAGCTTTGGGGATTCTTCAAAAGAAGATC
FY450865       --> TTATCTGGAGCGTAGGTTTGAGAGCTTTGGGGATTCTTCAAAAGAAGATC
FD990354       --> ..................................................
FY431417       --> TTATCTGGAGCGTAGGTTTGAGAGCTTTGGGGATTCTTCAAAAGAAGATC
FY431429       --> TTATCTGGAGCGTAGGTTTGAGAGCTTTGGGGATTCTTCAAAAGAAGATC
FD559804       --> CTATCTGGAGCGTAGGTTTGAGAGCTTTGGGGATTCTTCAAAGGAAGATC
EY921271       --> CTATCTGGAGCGTAGGTTTGAGAGCTTTGGGGATTCTTCAAAAGAAGATC
FD559498       --> TTATCTGGAGCGTAGGTTTGAGAGCTTTGAGGATTCTTCAAAAGAAGATC
FD570491       --> TTATCTGGAGCGTAGGTTTGAGAGCTTTGGGGATTCTTCAAAAGAAGATC
FD970834       --> ..................................................

               651    -    701
UN19363        --> TGATCAAAGATGCTATTCTGGCTGTGAGGGAGACATTGCAAGGAGAAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD986074       <-- TGATCAAAGATGCTATTCTGGCTGTGAGGGAGACATTGCAAGGAGAAACA
FD555196       <-- TGATCAAAGATGCTATTCTGGCTGTGAGGGAGACATTGCAAGGAGAAACA
FD574478       <-- TGATCAAAGATGCTATTCTGGCTGTGAGGGAGACATTGCGAGGAGAAACA
FD988080       --> TGATCAAAGATGCTATTCTGGCTGTGAGGGAGACATTGCAAGGAGAAACA
FY450865       --> TGATCAAAGATGCTATTCTGGCTGTGAGGGAGACATTGCAAGGAGAA-CA
FD990354       --> ..................................................
FY431417       --> TGATCAAAGATGCTATTCTGGCTGTGAGGGAGACATTGCAAGGAGAAACA
FY431429       --> TGATCAAAGATGCTATTCTGGCTGTGAGGGAGACATTGCAAGGAGAAACA
FD559804       --> TGATCAAAGATGCTATTCTGGCTGTGAGGGAGACATTGCAAGGAGAAACA
EY921271       --> TGATCAAAGATGCTATTCTGGCTGTGAGGGAGACATTGCAAGGAGAAACA
FD559498       --> TGATCAAAGATGCTATTCTGGCTGTGAGGGAGACATTGCAAGGAGAAACA
FD570491       --> TGATCAAAGATGCTATTCTGGCTGTGAGGGAGACATTGCGAGGAGAAACA
FD970834       --> ................................gCATTGCAAGGAGAAACA

               701    -    751
UN19363        --> CTGAAGAGTTCTCTCTGCACTGTCTCTGTTCTAGGTGTCGGTGAGCCGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD986074       <-- CTGAAGAGTTCTCTCTGCACGGTCTCTGTCCTAGGTGTCGGTGAGCCGTT  Raphanus raphanistrum subsp. landra
FD555196       <-- CTGAAGAGTTCTCTCTGCACAGTCTCTGTTCTAGGTGTCGGTGAGCCGTT  Raphanus raphanistrum subsp. landra
FD574478       <-- CTGAAGAGTTCTCTCTGCACTGTCTCTGTTCTAGGTGTTGGTGAGCCGTT  Raphanus sativus cv Early Scarlet Globe
FD988080       --> CTGAAGAGTTCTCTCTGCACGGTCTCTGTCCTAGtg..............  Raphanus raphanistrum subsp. landra
FY450865       --> CTGAAGAGTTCTCTCTGCACTGTCTCTGTTCTAGGTGTCGGTGAGCCGT.  Raphanus sativus cv GSK3-1
FD990354       --> ..................................................  Raphanus raphanistrum subsp. landra
FY431417       --> CTGAAGAGTTCTCTCTGCACTGTCTCTGTTCTAGGTGTCGGTGAGCCGTT  Raphanus sativus cv GSK3-1
FY431429       --> CTGAAGAGTTCTCTCTGCACTGTCTCTGTTCTAGGTGTCGGTGAGCCGTT  Raphanus sativus cv GSK3-1
FD559804       --> CTGAAGAGTTCTCTCTGCACGGTCTCTGTCCTAGGTGTCGGTGAGCCGTT  Raphanus raphanistrum subsp. landra
EY921271       --> CTGAAGAGTTCTCTCTGCACGGTCTCTGTCCTAGGTGTCGGTGAGCCGTT  Raphanus raphanistrum subsp. landra
FD559498       --> CTGAAGAGTTCTCTCTGCACAGTCTCTGTTCTAGGTGTCGGTGAGCCGTT  Raphanus raphanistrum subsp. landra
FD570491       --> CTGAAGAGTTCTCTCTGCACTGTCTCTGTTCTAGGTGTTGGTGAGCCGTT  Raphanus sativus cv Early Scarlet Globe
FD970834       --> CTGAAGAGTTCACTCTGCACGGTCTCTGTTCTAGGTGTCGGTGAGCCGTT  Raphanus raphanistrum subsp. raphanistrum (MS)

               751    -    801
UN19363        --> CCACTTCTTGGACCAGGAAACTATCCAGAAAGTGATTGACACATTTGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD986074       <-- CCACTTCTTGGACCAGGAAACTATCCAGAAAGTGATTGACACATTTGAGA  Raphanus raphanistrum subsp. landra
FD555196       <-- CCACTTCTTGGACCAGGAAACTATCCAGAAAGTGATTGACACATTTGAGA  Raphanus raphanistrum subsp. landra
FD574478       <-- CCACTTCTTGGACCAGGAAACTATACAGAAAGTGATTGACACTTTTGAGA  Raphanus sativus cv Early Scarlet Globe
FD988080       --> ..................................................  Raphanus raphanistrum subsp. landra
FY450865       --> ..................................................  Raphanus sativus cv GSK3-1
FD990354       --> ..................................................  Raphanus raphanistrum subsp. landra
FY431417       --> CCACTTCTTGGACCAGGAAACTATACAGAAAGTGATTGACACTTTTGAGA  Raphanus sativus cv GSK3-1
FY431429       --> CCACTTCTTGGACCAGGAAACTATACAGAAAGTGATTGACACTTTTGAGA  Raphanus sativus cv GSK3-1
FD559804       --> CCACTTCTTGGACCAGGAAACTATCCAGAAAGTGATTGACACATTTGAGA  Raphanus raphanistrum subsp. landra
EY921271       --> CCACTTCTTGGACCAGGAAACTATCCAGAAAGTGATTGACACATTTGAGA  Raphanus raphanistrum subsp. landra
FD559498       --> CCACTTCTTGGACCAGGAAACTATCCAGAAAGTGATTGACACATTTGAGA  Raphanus raphanistrum subsp. landra
FD570491       --> CCACTTCTTGGACCAGGAAACTATACAGAAAGTGATTGACACTTTTGAGA  Raphanus sativus cv Early Scarlet Globe
FD970834       --> CCACTTCTTGGACCAGGAAACTATCCGGAAAGTGATTGACACATTTGAGA  Raphanus raphanistrum subsp. raphanistrum (MS)

               801    -    851
UN19363        --> AAGTACCTGAAGAAGAGGAAGGTGAGGCTGGTGAGGGTGAGGCTGAAGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD986074       <-- AAGTACCTGAAGAAGAGGAAGGTGAGGCTGGTGAGGGTGAGGCTGAAGCT  Raphanus raphanistrum subsp. landra
FD555196       <-- AAGTACCTGAAGAAGAGGAAGGTGAGGCTGGCGAGGGTGAGGCTGAAGCT  Raphanus raphanistrum subsp. landra
FD574478       <-- AAGTACCTGAAGAAGAGGAAGCTGAGGCTGGTGAGGGTGAGGCTGAAGCT  Raphanus sativus cv Early Scarlet Globe
FD988080       --> ..................................................  Raphanus raphanistrum subsp. landra
FY450865       --> ..................................................  Raphanus sativus cv GSK3-1
FD990354       --> ..................................................  Raphanus raphanistrum subsp. landra
FY431417       --> AAGTACCTGAAGAAGAGGAAGCTGAGGCTGGTGAGGGTGAGGCTGAAGCT  Raphanus sativus cv GSK3-1
FY431429       --> AAGTACCTGAAGAAGAGGAAGCTGAGGCTGGTGAGGGTGAGGCTGAAGCT  Raphanus sativus cv GSK3-1
FD559804       --> AAGTACCTGAAGAAGAGGAAGGTGAGGCTGGTGAGGGTGAGGCTGAAGCT  Raphanus raphanistrum subsp. landra
EY921271       --> AAGTACCAGAAGAAGAGGAAGGTGAGGCTGGTGAGGGTGAGGCTGAAGCT  Raphanus raphanistrum subsp. landra
FD559498       --> AAGTACCTGAAGAAGAGGAAGGTGAGGCTGGCGAGGGTGAGGCTGAAGCT  Raphanus raphanistrum subsp. landra
FD570491       --> AAGTACCTGAAGAAGAGGAAGCTGAGGCTGGTGAGGGTGAGGCTGAAGCT  Raphanus sativus cv Early Scarlet Globe
FD970834       --> AAGTACCTGAAGAAGAGGAAGGTGACGCTGGGGAGGGTGAGGCTGAAGCT  Raphanus raphanistrum subsp. raphanistrum (MS)

               851    -    901
UN19363        --> GCACCAGCGGAGCAGGGTGGTGATGGTGGTGGTGCAGGTGACCAAGACGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD986074       <-- GCACCAGCGGAGCAGGGTGGTGATGGTGGTGGTGCAGGTGACCAAGACGT  Raphanus raphanistrum subsp. landra
FD555196       <-- GCACCAGCGGAGCAGGGTGGTGATGGTGGTGGTGCAGGTGACCAAGACGT  Raphanus raphanistrum subsp. landra
FD574478       <-- GCGCCAGCGGAGCAGGGTGGTGATGGTGGTGGTGCAGGTGATCAAGACGT  Raphanus sativus cv Early Scarlet Globe
FD988080       --> ..................................................  Raphanus raphanistrum subsp. landra
FY450865       --> ..................................................  Raphanus sativus cv GSK3-1
FD990354       --> ..................................................  Raphanus raphanistrum subsp. landra
FY431417       --> GCGCCAGCGGAGCAGGGTGGTGATGGTGGTGGTGCAGGTGATCAAGACGT  Raphanus sativus cv GSK3-1
FY431429       --> GCGCCAGCGGAGCAGGGTGGTGATGGTGGTGGTGCAGGTGATCAAGACGT  Raphanus sativus cv GSK3-1
FD559804       --> GCACCAGCGGAGCAG...................................  Raphanus raphanistrum subsp. landra
EY921271       --> GCACCAGCGGAGCAGGGTGGTGATGGTGGTGGTGCAGGTAACCAAGACGT  Raphanus raphanistrum subsp. landra
FD559498       --> GCACCAGCGGAGCAGGGTGGTGATGGTGGTGGTGCAGGTGACCAAGACGT  Raphanus raphanistrum subsp. landra
FD570491       --> GCGCCAGCGGAGCAGGGTGGTGATGGTGGTGGTGCAGGTGATCAAGACGT  Raphanus sativus cv Early Scarlet Globe
FD970834       --> GCACCAGCGGAGCAGGGTGGTGGTGGTGGTGGTGCAGGTGACCAAGACGT  Raphanus raphanistrum subsp. raphanistrum (MS)

               901    -    951
UN19363        --> GGCTCCAATGGAAATGT-A-GG-CCTTTGTGTGGAACGCTGTGAACTGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD986074       <-- GGCTCCAATGGAAATGT-AAGG-CCTTTGTGTGGAACGCTGTGAACTGTT
FD555196       <-- GGCTCCGATGGAAATGTGA-GG-CCTTTGTGCGGAACGCTGTGAACTGTT
FD574478       <-- GGCTCCAATGGAAATGT-A-GG-CCTTTGTGTGGAACGCTGTGAACTGTT
FD988080       --> ..................................................
FY450865       --> ..................................................
FD990354       --> ..................................................
FY431417       --> GGCTCCAATGG.......................................
FY431429       --> GGCTCCAATGGAAATGT-AAGG-CCTTTGTGTGGAACGCTGTGAACTGTT
FD559804       --> ..................................................
EY921271       --> GGCTCCAATGGAAATGT-A-GGGCCTTTGTGTGGAACGCTGTGAACTGTT
FD559498       --> GGCTCCGATGGAAATGTGA-GG-CCTTTGTGCGGAACGCTGTGAACTGTT
FD570491       --> GGCTCCAATGGAAATGT-A-GG-CCTTTGTGTGGAACGCTGTGAACTGTT
FD970834       --> GGCTCCAATGGAAATGT-AAGG-CCTTTGTGTGGAACGCTGTGAACTGTT

               951    -   1001
UN19363        --> TTAATTGAATGTTTGTCGAATTTACTTTGGATAATTTCATTTGCAAATCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD986074       <-- TTAATTGAATGTTTGTCGAATTTACTTTGGATAATTTCATTTGCAAATCG
FD555196       <-- TTAATTGAATGTTTGTCGAATTTACTTTGGATAATTTCATTTGCAAATCG
FD574478       <-- TTAATTGAATGTTTGTCGAATTTACTTTGGATAATTTCATTTGCAAATCG
FD988080       --> ..................................................
FY450865       --> ..................................................
FD990354       --> ..................................................
FY431417       --> ..................................................
FY431429       --> TTAATTGAATGT......................................
FD559804       --> ..................................................
EY921271       --> TTAATTGAATGTTTGTCGAATTTACTTTGGATAATTTCATTTGCAAATCG
FD559498       --> TTAATTGAATGTTTGTCGAATTTACTTTGGA...................
FD570491       --> TTAATTGAATGTTTGTCGAATTTACTTTGGATAATTTCATTTGCAAATCG
FD970834       --> TTAATTGAATGTTTGTCGAATTTACTTTGGATATTTTCATTTGCAAATCG

               1001   -   1051
UN19363        --> CAGCGGTTTTAGATTATATGCTCGAAAACCTCGTGGGGTTGAAATCATTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD986074       <-- CAGCGGTTTTAGATTATATGCTCGAAAAACTCGTGGGGTTGAAATCATTT
FD555196       <-- CAGCGGTTTTAGATTATATGCTCGAAAAACTCGTGGGGTc..........
FD574478       <-- CAGCGGTTTTAGATTATATGCTCGAAAACCTCGTGGGGTTGAAATCATTT
FD988080       --> ..................................................
FY450865       --> ..................................................
FD990354       --> ..................................................
FY431417       --> ..................................................
FY431429       --> ..................................................
FD559804       --> ..................................................
EY921271       --> CAGCGGTTTTAGATTATATGCTCGAAAAC-TCGTGGGGTTGAAATCATTT
FD559498       --> ..................................................
FD570491       --> CAGCGGTTTTAGATTATATGCTCGAAAACCTCGTGGGGTTGAAATCATTT
FD970834       --> CAGCGGTTTTAGATTATATGCTCGAAATCCTCGTGGGGTTGAAATCATTT

               1051   -   1101
UN19363        --> GGTCATTTTAATTTCATAGCTATCGTTAAGACT--GTTGTTCCATCTTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD986074       <-- GGTCATTTTAATTTCATAGCTATCGTc.......................
FD555196       <-- ..................................................
FD574478       <-- GGTCATTTTAATTTCATAGCTATCGTTAAGACT--GTTGTTCCATCTTTT
FD988080       --> ..................................................
FY450865       --> ..................................................
FD990354       --> ..................................................
FY431417       --> ..................................................
FY431429       --> ..................................................
FD559804       --> ..................................................
EY921271       --> GGTCATTTTAATTTCATAGCTATCGTcag.....................
FD559498       --> ..................................................
FD570491       --> GGTCATTTTAATTTCATAGCTATCGTTAAGACT--GTTGTTCCATCTTTT
FD970834       --> GGTCATTTTAATTTCATAGCTATCGTTAAGACTCTGTTGTTTCATCTTTT

               1101   -   1151
UN19363        --> CATTTAAATATGTTCACAACTCCATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~
FD986074       <-- ..........................
FD555196       <-- ..........................
FD574478       <-- CATTTAAATATGTTCACAACTCC...
FD988080       --> ..........................
FY450865       --> ..........................
FD990354       --> ..........................
FY431417       --> ..........................
FY431429       --> ..........................
FD559804       --> ..........................
EY921271       --> ..........................
FD559498       --> ..........................
FD570491       --> CATTTAAATATGTTCACAACTCC...
FD970834       --> CATTTAAATATGTTCACAACTCCATA