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Alignment for radish unigene UN19418

               1      -     51
UN19418        --> GTCTATGTTATCATCACAGGTGAATACCATAGTAAGTTTTGTAAAATGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV525929       <-- ..................................................
FY443437       <-- ..................................................
FY428188       <-- ..................................................
FY447691       <-- ..................................................
FY439463       <-- ..................................................
EX749838       <-- ..................................................
EX750187       <-- ..................................................
EX770519       <-- ..................................................
HS107039       <-- ..................................................
FD986294       <-- ..................................................
EY922910       <-- ..................................................
FD560017       <-- ..................................................
FD986926       --> GTCTATGTTATCATCACAGGTGAATACCATAGTAAGTTTTGTAAAATGAA
EX774698       --> ..................................................
EY918784       --> ..................................................
FD982568       --> ..................................................
EV530542       --> ..................................................
FD555647       --> ..................................................

               51     -    101
UN19418        --> CCTGGGACAAATGAACGTTTAAAGACCCTTATAAAAAGCTGAGCCCACAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV525929       <-- ..................................................
FY443437       <-- ..................................................
FY428188       <-- ..................................................
FY447691       <-- ..................................................
FY439463       <-- ..................................................
EX749838       <-- ..................................................
EX750187       <-- ..................................................
EX770519       <-- ..................................................
HS107039       <-- ..................................................
FD986294       <-- ..................................................
EY922910       <-- ..................................................
FD560017       <-- ..................................................
FD986926       --> CCTGGGACAAATGAACGTTTAAAGACCCTTATAAAAAGCTGAGCCCACAA
EX774698       --> ..................................................
EY918784       --> ..................................................
FD982568       --> ..................................................
EV530542       --> ..................................................
FD555647       --> ..................................................

               101    -    151
UN19418        --> CCCATTGCTGCACAGTGGATTCAGTGCAGTGTATTTGTACAATAATAATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV525929       <-- ..................................................
FY443437       <-- ..................................................
FY428188       <-- ..................................................
FY447691       <-- ..................................................
FY439463       <-- ..................................................
EX749838       <-- ..................................................
EX750187       <-- ..................................................
EX770519       <-- ..................................................
HS107039       <-- ..................................................
FD986294       <-- ..................................................
EY922910       <-- ..................................................
FD560017       <-- ..................................................
FD986926       --> CCCATTGCTGCACAGTGGATTCAGTGCAGTGTATTTGTACAATAATAATA
EX774698       --> ..................................................
EY918784       --> ..................................................
FD982568       --> ..................................................
EV530542       --> ..................................................
FD555647       --> ..................................................

               151    -    201
UN19418        --> TGTCAAACATGACAAGAGTAGCTACCAAGATTCCACATCCTGCTCACAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV525929       <-- ..................................................
FY443437       <-- ..................................................
FY428188       <-- ..................................................
FY447691       <-- ..................................................
FY439463       <-- ..................................................
EX749838       <-- ..................................................
EX750187       <-- ..................................................
EX770519       <-- ..................................................
HS107039       <-- ..................................................
FD986294       <-- ..................................................
EY922910       <-- ..................................................
FD560017       <-- ..................................................
FD986926       --> TGTCAAACATGACAAGAGTAGCTACCAAGATTCCACATCCTGCTCACAAC
EX774698       --> ..................................................
EY918784       --> ..................................................
FD982568       --> ..................................................
EV530542       --> ..................................................
FD555647       --> ..................................................

               201    -    251
UN19418        --> ATTTTTCAGGCATATAAACGTTAGGAAACTCAATGATCTACCTAACCAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV525929       <-- ..................................................
FY443437       <-- ..................................................
FY428188       <-- ..................................................
FY447691       <-- ..................................................
FY439463       <-- ..................................................
EX749838       <-- ..................................................
EX750187       <-- ..................................................
EX770519       <-- ..................................................
HS107039       <-- ..................................................
FD986294       <-- ..................................................
EY922910       <-- ..................................................
FD560017       <-- ..................................................
FD986926       --> ATTTTTCAGGCATATAAACGTTAGGAAACTCAATGATCTACCTAACCAGA
EX774698       --> ..................................................
EY918784       --> ..................................................
FD982568       --> ..................................................
EV530542       --> ..................................................
FD555647       --> ..................................................

               251    -    301
UN19418        --> AATTAATGTTGAATCACATTAAGGGCCTTCAAAGTATTCTTCAAAGAAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV525929       <-- ..................................................
FY443437       <-- ..................................................
FY428188       <-- ..................................................
FY447691       <-- ..................................................
FY439463       <-- ..................................................
EX749838       <-- ..................................................
EX750187       <-- ..................................................
EX770519       <-- ..................................................
HS107039       <-- ..................................................
FD986294       <-- ..................................................
EY922910       <-- ..................................................
FD560017       <-- ..................................................
FD986926       --> AATTAATGTTGAATCACATTAAGGGCCTTCAAAGTATTCTTCAAAGAAAC
EX774698       --> ..................................................
EY918784       --> ..................................................
FD982568       --> ..................................................
EV530542       --> ..................................................
FD555647       --> ..................................................

               301    -    351
UN19418        --> TCAATGTACTACCTACGATCAACATATATGTACTGCACGGACAAATTGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV525929       <-- ..................................................
FY443437       <-- ..................................................
FY428188       <-- ..................................................
FY447691       <-- ..................................................
FY439463       <-- ..................................................
EX749838       <-- ..................................................
EX750187       <-- ..................................................
EX770519       <-- ..................................................
HS107039       <-- ..................................................
FD986294       <-- ..................................................
EY922910       <-- ..................................................
FD560017       <-- ..................................................
FD986926       --> TCAATGTACTACCTACGATCAACATATATGTACTGCACGGACAAATTGTG
EX774698       --> ..................................................
EY918784       --> ..................................................
FD982568       --> ..................................................
EV530542       --> ..................................................
FD555647       --> ..................................................

               351    -    401
UN19418        --> CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTATCAATAAGCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV525929       <-- ..................................................
FY443437       <-- ..................................................
FY428188       <-- ..................................................
FY447691       <-- ..................................................
FY439463       <-- ..................................................
EX749838       <-- ..................................................
EX750187       <-- ..................................................
EX770519       <-- ..................................................
HS107039       <-- ..................................................
FD986294       <-- ..................................................
EY922910       <-- ..................................................
FD560017       <-- ..................................................
FD986926       --> CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTATCAATAAGCCT
EX774698       --> ..................................................
EY918784       --> ..................................................
FD982568       --> ..................................................
EV530542       --> ..................................................
FD555647       --> ..................................................

               401    -    451
UN19418        --> CGTTGATAAAGCCTTTAACAACAAAAAGAAAGCAGCGAACAAGTTGCTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV525929       <-- ..................................................
FY443437       <-- ..................................................
FY428188       <-- ..................................................
FY447691       <-- ..................................................
FY439463       <-- ..................................................
EX749838       <-- ..................................................
EX750187       <-- ..................................................
EX770519       <-- ..................................................
HS107039       <-- ..................................................
FD986294       <-- ..................................................
EY922910       <-- ..................................................
FD560017       <-- ..................................................
FD986926       --> CGTTGATAAAGCCTTTAACAACAAAAAGAAAGCAGCGAACAAGTTGCTAA
EX774698       --> ..................................................
EY918784       --> ..................................................
FD982568       --> ..................................................
EV530542       --> ..................................................
FD555647       --> ..................................................

               451    -    501
UN19418        --> TAAAGCATATTCACAGATTCGCCAAAACTTTTGTGGATCTTCCACTACTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV525929       <-- ..................................................
FY443437       <-- ..................................................
FY428188       <-- ..................................................
FY447691       <-- ..................................................
FY439463       <-- ..................................................
EX749838       <-- ..................................................
EX750187       <-- ..................................................
EX770519       <-- ..................................................
HS107039       <-- ..................................................
FD986294       <-- ..................................................
EY922910       <-- ..................................................
FD560017       <-- ..................................................
FD986926       --> TAAAGCATATTCACAGATTCGCCAAAACTTTTGTGGATCTTCCACTACTT
EX774698       --> ..................................................
EY918784       --> ..................................................
FD982568       --> ..................................................
EV530542       --> ..................................................
FD555647       --> ..................................................

               501    -    551
UN19418        --> ATGGCCAGCTCCTACTCTGCTCAATAGTATTTTTTCAACTAATCATCATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV525929       <-- ..................................................
FY443437       <-- ..................................................
FY428188       <-- ..................................................
FY447691       <-- ..................................................
FY439463       <-- ..................................................
EX749838       <-- ..................................................
EX750187       <-- ..................................................
EX770519       <-- ..................................................
HS107039       <-- ..................................................
FD986294       <-- ..................................................
EY922910       <-- ..................................................
FD560017       <-- ..................................................
FD986926       --> ATGGCCAGCTCCTACTCTGCTCAATAGTATTTTTTCAACTAATCATCATC
EX774698       --> ..................................................
EY918784       --> ..................................................
FD982568       --> ..................................................
EV530542       --> ..................................................
FD555647       --> ..................................................

               551    -    601
UN19418        --> CTAGATACAAACAAACAAACAACTTAACAAAAGTGTCAAATATGCTCATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV525929       <-- ..................................................
FY443437       <-- ..................................................
FY428188       <-- ..................................................
FY447691       <-- ..................................................
FY439463       <-- ..................................................
EX749838       <-- ..................................................
EX750187       <-- ..................................................
EX770519       <-- ..................................................
HS107039       <-- ..................................................
FD986294       <-- ..................................................
EY922910       <-- ..................................................
FD560017       <-- ..................................................
FD986926       --> CTAGATACAAACAAACAAACAACTTAACAAAAGTGTCAAATATGCTCATT
EX774698       --> ..................................................
EY918784       --> ..................................................
FD982568       --> ..................................................
EV530542       --> ..................................................
FD555647       --> ..................................................

               601    -    651
UN19418        --> TCAACAATATTTAGTTTTTTTTTCTCTGGTGCAGAAAAAATAGATGATCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV525929       <-- ............................gggtAGAAAAGATAGATGATCC
FY443437       <-- ..................................................
FY428188       <-- ..................................................
FY447691       <-- ..................................................
FY439463       <-- ..................................................
EX749838       <-- ..................................................
EX750187       <-- ..................................................
EX770519       <-- ..................................................
HS107039       <-- ..................................................
FD986294       <-- ..................................................
EY922910       <-- ..................................................
FD560017       <-- ..................................................
FD986926       --> TCAACAATATTTAGTTTTTTTTTCTCTGGTGCAGAAAAA-TAGATGATCC
EX774698       --> ..............................GCAGAAAAAATAGATGATCC
EY918784       --> ..............................GCAGAAAAAATAGATGATCC
FD982568       --> ...............................CAGAAAAAATAGATGATCC
EV530542       --> ............................gggtAGAAAAGATAGATGATCC
FD555647       --> ...............................caaAAAAAATAGATGATCC

               651    -    701
UN19418        --> CATATTAAGACGAACCAAAAATCCAAAAGAGTGACCAAAACAATATAGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV525929       <-- CATATTAAGACGAACCAAAAATCCAAAAGAGTGACCAAAACAATATAGCT
FY443437       <-- .................................ACCAAAACAATATAGCT
FY428188       <-- ..................................................
FY447691       <-- ..................................................
FY439463       <-- ..................................................
EX749838       <-- ..................................................
EX750187       <-- ..................................................
EX770519       <-- ..................................................
HS107039       <-- ..................................................
FD986294       <-- ..................................................
EY922910       <-- ..................................................
FD560017       <-- ..................................................
FD986926       --> CATATTAAGACGAGCCAAAAATCCAAAAGAGTGACCAAAACAATATAGCT
EX774698       --> CATATTAAGACGAACCAAAAATCCAAAAGAGTGACCAAAACAATATAGCT
EY918784       --> CATATTAAGACGAACCAAAAATCCAAAAGAGTGACCAAAACAATATAGCT
FD982568       --> CATATTAAGACGAACCAAAAATCCAAAAGAGTGACCAAAACAATATAGCT
EV530542       --> CATATTAAGACGAACCAAAAATCCAAAAGAGTGACCAAAACAATATAGCT
FD555647       --> CATATTAAGACGAACCAAAAATCCAAAAGAGTGACCAAAACAATATAGCT

               701    -    751
UN19418        --> GCGTGTCACATGTTCAGGAATTAAATCTCCACACAAATCATGTGATCAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV525929       <-- GCGTGTCACATGTTCAGGAATTAAATCTCCACACAAATCATGTGATCAAA
FY443437       <-- GCGTGTCACATGTTCAGGAATTAAATCTCCACACAAATCATGTGATCAAA
FY428188       <-- ..................................................
FY447691       <-- ..................................................
FY439463       <-- ..................................................
EX749838       <-- ..................................................
EX750187       <-- ..................................................
EX770519       <-- ..................................................
HS107039       <-- ..................................................
FD986294       <-- ..................................................
EY922910       <-- ..................................................
FD560017       <-- ..................................................
FD986926       --> GCGTGTCACATGT.....................................
EX774698       --> GCGTGTCACATGTTCAGGAATTAAATCTCCACACAAATCATGTGATCAAA
EY918784       --> GCGTGTCACATGTTCAGGAATTAAATCTCCACACAAATCATGTGATCAAA
FD982568       --> GCGTGTCACATGTTCAGGAATTAAATCTCCACACAAATCATGTGATCAAA
EV530542       --> GCGTGTCACATGTTCAGGAATTAAATCTCCACACAAATCATGTGATCAAA
FD555647       --> GCGTGTCACATGTTCAGGAATTAAATCTCCACACAAATCATGTGATCAAA

               751    -    801
UN19418        --> GATGAAGATCAAAATAGATTCTCAAACTCCATAAAAGGAAAGATGAAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV525929       <-- GATGAAGATCAAAATAGATTCTCAAACTCCATAAAAGGAAAGATGAAGAA
FY443437       <-- GATGAAGATCAAAATAGATTCTCAAACTCCATAAAAGGAAAGATGAAGAA
FY428188       <-- ..........................................ATGAAGAA
FY447691       <-- ..................................................
FY439463       <-- ..................................................
EX749838       <-- ..................................................
EX750187       <-- ..................................................
EX770519       <-- ..................................................
HS107039       <-- ..................................................
FD986294       <-- ..................................................
EY922910       <-- ..................................................
FD560017       <-- ..................................................
FD986926       --> ..................................................
EX774698       --> GATGAAGATCAAAATAGATTCTCAAACTCCATAAAAGGAAAGATGAAGAA
EY918784       --> GATGAAGATCAAAATAGATTCTCAAACTCCATAAAAGGAAAGATGAAGAA
FD982568       --> GATGAAGATCAAAATAGATTCTCAAACTCCATAAAAGGAAAGATGAAGAA
EV530542       --> GATGAAGATCAAAATAGATTCTCAAACTCCATAAAAGGAAAGATGAAGAA
FD555647       --> GATGAAGATCAAAATAGATTCTCAAACTCCATAAAAGGAAAGATGAAGAA

               801    -    851
UN19418        --> GAGTACAGTCTCCATATGAAGATGCTATTAATTTATTGTGGAACTGGGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV525929       <-- GAGTACAGTCTCCATATGAAGATGCTATTAATTTATTGTGGAACTGGGCC
FY443437       <-- GAGTACAGTCTCCATATGAAGATGCTATTAATTTATTGTGGAACTGGGCC
FY428188       <-- GAGTACAGTCTCCATATGAAGATGCTATTAATTTATTGTGGAACTGGGCC
FY447691       <-- ..............................................GGCC
FY439463       <-- ..................................................
EX749838       <-- ..................................................
EX750187       <-- ..................................................
EX770519       <-- ..................................................
HS107039       <-- ..................................................
FD986294       <-- ..................................................
EY922910       <-- ..................................................
FD560017       <-- ..................................................
FD986926       --> ..................................................
EX774698       --> GAGTACAGTCTCCATATGAAGATGCTATTAATTTATTGTGGAACTGGGCC
EY918784       --> GAGTACAGTCTCCATATGAAGATGCTATTAATTTATTGTGGAACTGGGCC
FD982568       --> GAGTACAGTCTCCATATGAAGATGCTATTAATTTATTGTGGAACTGGGCC
EV530542       --> GAGTACAGTCTCCATATGAAGATGCTATTAATTTATTGTGGAACTGGGCC
FD555647       --> AAGTACAGTCTCCATATGAAGATGCTATTAATTTATTGTGGAACTGGGCC

               851    -    901
UN19418        --> CTGACATCATCACTGGATGTTGATATCATGGAACGATGGCAAGACCGCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV525929       <-- CTGACATCATCACTGGATGTTGATATCATGGAACGATGGCAAGACCGCAA
FY443437       <-- CTGACATCATCACTGGATGTTGATATCATGGAACGATGGCAAGACCGCAA
FY428188       <-- CTGACATCATCACTGGATGTTGATATCATGGAACGATGGCAAGACCGCAA
FY447691       <-- CTGACATCATCACTGGATGTTGATATCATGGAACGATGGCAAGACCGCAA
FY439463       <-- ................ATGTTGATATCATGGAACGATGGCAAGACCGCAA
EX749838       <-- ..................................................
EX750187       <-- ..................................................
EX770519       <-- ..................................................
HS107039       <-- ..................................................
FD986294       <-- ..................................................
EY922910       <-- ..................................................
FD560017       <-- ..................................................
FD986926       --> ..................................................
EX774698       --> CTGACATCATCACTGGATGTTGATATCATGGAACGATGGCAAGACCGCAA
EY918784       --> CTGACATCATCACTGGATGTTGATATCATGGAACGATGGCAAGACCGCAA
FD982568       --> CTGACATCATCACTGGATGTTGATATCATGGAACGATGGCAAGACCGCAA
EV530542       --> CTGACATCATCACTGGATGTTGATATCATGGAACGATGGCAAGACCGCAA
FD555647       --> CTGACATCATCACTGGATGTTGATATCATGGAACGATGGCAAGACCGCAA

               901    -    951
UN19418        --> CCAGAGGCTCCCCATACCCTATAGAGTCTCCATCATCTGAAAGAAGCTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV525929       <-- CCAGAGGCTCCCCATACCCTA-AGAGTCTCCATCATCTGAAAGAAGCTTG
FY443437       <-- CCAGAGGCTCCCCATACCCTATAGAGTCTCCATCATCTGAAAGAAGCTTG
FY428188       <-- CCAGAGGCTCCCCATACCCTATAGAGTCTCCATCATCTGAAAGAAGCTTG
FY447691       <-- CCAGAGGCTCCCCATACCCTATAGAGTCTCCATCATCTGAAAGAAGCTTG
FY439463       <-- CCAGAGGCTCCCCATACCCTATAGAGTCTCCATCATCTGAAAGAAGCTTG
EX749838       <-- ..................................................
EX750187       <-- ..................................................
EX770519       <-- ..................................................
HS107039       <-- ..................................................
FD986294       <-- ..................................................
EY922910       <-- ..................................................
FD560017       <-- ..................................................
FD986926       --> ..................................................
EX774698       --> CCAGAGGCTCCCCATACCCTATAGAGTCTCCATCATCTGAAAGAAGCTTG
EY918784       --> CCAGAGGCTCCCCATACCCTATAGAGTCTCCATCATCTGAAAGAAGCTTG
FD982568       --> CCAGAGGCTCCCCATACCCTATAGAGTCTCCATCATCTGAAAGAAGCTTG
EV530542       --> CCAGAGGCTCCCCATACCCTA-AGAGTCTCCATCATCTGAAAGAAGCTTG
FD555647       --> CCAGAGGCTCCCCATACCCTATAGAGTCTCCATCATCTGAAAGAAGCTTG

               951    -   1001
UN19418        --> AGAACTTCACCAGCTACATCAGACGTTAGTGGAAGTTCTTTTCCCAGCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV525929       <-- AGAACTTCACCAGCTACATCAGACc.........................  Raphanus raphanistrum subsp. maritimus
FY443437       <-- AGAACTTCACCAGCTACATCAGACGTTACTGGAAGTTCTTTTCCCAGCTG  Raphanus sativus cv GSK3-1
FY428188       <-- AGAACTTCACCAGCTACATCAGACGTTACTGGAAGTTCTTTTCCCAGCTG  Raphanus sativus cv GSK3-1
FY447691       <-- AGAACTTCACCAGCTACATCAGACGTTACTGGAAGTTCTTTTCCCAGCTG  Raphanus sativus cv GSK3-1
FY439463       <-- AGAACTTCACCAGCTACATCAGACGTTACTGGAAGTTCTTTTCCCAGCTG  Raphanus sativus cv GSK3-1
EX749838       <-- ................................tgaagtcTTTCCCAGCTG  Raphanus raphanistrum subsp. maritimus
EX750187       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX770519       <-- ..................................................  Raphanus raphanistrum subsp. landra
HS107039       <-- ..................................................  Raphanus sativus var. niger
FD986294       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY922910       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD560017       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD986926       --> ..................................................  Raphanus raphanistrum subsp. landra
EX774698       --> AGAACTTCACCAGCTACATCAGACGTTAGTGGAAGTTCTTTTCCCAGCTG  Raphanus raphanistrum subsp. landra
EY918784       --> AGAACTTCACCAGCTACATCAGACGTTAGTGGAAGTTCTTTTCCCAGCTG  Raphanus raphanistrum subsp. landra
FD982568       --> AGAACTTCACCAGCTACATCAGACGTTAGTGGAAGTTCTTTTCCCAGCTG  Raphanus raphanistrum subsp. landra
EV530542       --> AGAACTTCACCAGCTACATCAGACc.........................  Raphanus raphanistrum subsp. maritimus
FD555647       --> AGAACTTCACCAGCTACATCAAACGTTAGTGGAAGTTCTTTTCCCAGCTG  Raphanus raphanistrum subsp. landra

               1001   -   1051
UN19418        --> ATGCACGTATCCAATCACTTGCCCTTCCTTTATTGCATCACCCTCTTTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV525929       <-- ..................................................
FY443437       <-- ATGCACGTATCCAATCACTTGCCCTTCCTTTATTGCATCACCCTCTTTGC
FY428188       <-- ATGCACGTATCCAATCACTTGCCCTTCCTTTATTGCATCACCCTCTTTGC
FY447691       <-- ATGCACGTATCCAATCACTTGCCCTTCCTTTATTGCATCACCCTCTTTGC
FY439463       <-- ATGCACGTATCCAATCACTTGCCCTTCCTTTATTGCATCACCCTCTTTGC
EX749838       <-- ATGCACGTATCCA-TCACT-GCCCTTCCTTT-TTGCATCACC-TCTTTGC
EX750187       <-- ..................................................
EX770519       <-- ..................................................
HS107039       <-- ..................................................
FD986294       <-- ..................................................
EY922910       <-- ..................................................
FD560017       <-- ..................................................
FD986926       --> ..................................................
EX774698       --> ATGCACGTATCCAATCACTTGCCCTTCCTTTATTGCATCACCCTCTTTGC
EY918784       --> ATGCACGTATCCAATCACTTGCCCTTCCTTTATTGCATCACCCTCTTTGC
FD982568       --> ATGCACGTATCCAATCACTTGCCCTTCCTTTATTGCATCACCCTCTTTGC
EV530542       --> ..................................................
FD555647       --> ATGCACGTATCCAATCACTTGCCCTTCCTTTATTGCATCACCCTCTTTGC

               1051   -   1101
UN19418        --> AGCTAGGACCTTGTTTCTTTCCTTTTACAGTTCTGCTTCTCTGAAACTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV525929       <-- ..................................................
FY443437       <-- AGCTAGGACCTTGTTTCTTTCCTTTTACAGTTCTGCTTCTCTGAAACTTG
FY428188       <-- AGCTAGGACCTTGTTTCTTTCCTTTTACAGTTCTGCTTCTCTGAAACTTG
FY447691       <-- AGCTAGGACCTTGTTTCTTTCCTTTTACAGTTCTGCTTCTCTGAAACTTG
FY439463       <-- AGCTAGGACCTTGTTTCTTTCCTTTTACAGTTCTGCTTCTCTGAAACTTG
EX749838       <-- AGCTAGGAC-TTGTTTCTTTC-TTTTACAGT-CTGCTTCTCTGAAACTTG
EX750187       <-- ...........TGTTTCTTTC-TTTTACAGTTCTGCTTCTCTGAAACTTG
EX770519       <-- .......................TTTACAGT-CTGCTTCTCTGAAACTTG
HS107039       <-- ............................AGTTCTGCTTCTCTGAAACTTG
FD986294       <-- ....................................TTCTCTGAAACTTG
EY922910       <-- ...............................................TTG
FD560017       <-- ..................................................
FD986926       --> ..................................................
EX774698       --> AGCTAGGACCTTGTTTCTTTCCTTTTACAGTTCTGCTTCTCTGAAACTTG
EY918784       --> AGCTAGGACCTTGTTTCTTTCCTTTTACAGTTCTGCTTCTCTGAAACTTG
FD982568       --> AGCTAGGACCTTGTTTCTTTCCTTTTACAGTTCTGCTTCTCTGAAACTTG
EV530542       --> ..................................................
FD555647       --> AGCTAGGACCTTGTTTCTTTCCTTTTACAGTTCTGCTTCTCTGAAACTTG

               1101   -   1151
UN19418        --> CCCACTGAGGGAGATGTGACTAGAACATAGTTGTTAGATCCAGATGCATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV525929       <-- ..................................................
FY443437       <-- CCCACTGAGGGAGATGTGACTAGAACATAGTTGTTAGATCCAGATGCATC
FY428188       <-- CCCACTGAGGGAGATGTGACTAGAACATAGTTGTTAGATCCAGATGCATC
FY447691       <-- CCCACTGAGGGAGATGTGACTAGAACATAGTTGTTAGATCCAGATGCATC
FY439463       <-- CCCACTGAGGGAGATGTGACTAGAACATAGTTGTTAGATCCAGATGCATC
EX749838       <-- CCCACTGAGGGAGATGTGACTAGAACATAGTTGTTAGATCCAGATGCATC
EX750187       <-- CCCACTGAGGGAGATGTGACTAGAACATAGTTGTTAGATCCAGATGCATC
EX770519       <-- CCCACTGAGGGAGATGTGACTAGAACATAGTTGTTAGATCCAGATGCATC
HS107039       <-- CCCACTGAGGGAGATGTGACTAGAACATAGTTGTTAGATCCAGATGCATC
FD986294       <-- CCCACTGAGGGAGATGTGACTAGAACATAGTTGTTAGATCCAGATGCATC
EY922910       <-- CCCACTGAGGGAGATGTGACTAGAACATAGTTGTTAGATCCAGATGCATC
FD560017       <-- ..................................................
FD986926       --> ..................................................
EX774698       --> CCCACTGAGGGAGATGTGACTAGAACATAGTTGTTAGATCCAGATGCATC
EY918784       --> CCCACTGAGGGAGATGTGACTAGAACATAGTTGTTAGATCCAGATGCATC
FD982568       --> CCCACTGAGGGAGATGTGACTAGAACATAGTTGTTAGATCCAGATGCATC
EV530542       --> ..................................................
FD555647       --> CCCACTGAGGGAGATGTGACTAGAACATAGTTGTTAGATCCAGATGCATC

               1151   -   1201
UN19418        --> CAAAGCAGCCAACTTTGATGATTTTCGGTATGCAGCATTAATAAATGGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV525929       <-- ..................................................
FY443437       <-- CAAAGCAGCCAACTTTGATGATTTTCGGTATGCAGCATTAATAAATGGAG
FY428188       <-- CAAAGCAGCCAACTTTGATGATTTTCGGTATGCAGCATTAATAAATGGAG
FY447691       <-- CAAAGCAGCCAACTTTGATGATTTTCGGTATGCAGCATTAATAAATGGAG
FY439463       <-- CAAAGCAGCCAACTTTGATGATTTTCGGTATGCAGCATTAATAAATGGAG
EX749838       <-- CAAAGCAGCCAACTTTGATGATTTTCGGTATGCAGCATTAATAAATGGAG
EX750187       <-- CAAAGCAGCCAACTTTGATGATTTTCGGTATGCAGCATTAATAAATGGAG
EX770519       <-- CAAAGCAGCCAACTTTGATGATTTTCGGTATGCAGCATTAATAAATGGAG
HS107039       <-- CAAAGCAGCCAACTTTGATGATNTTCGGTATGCAGCATTAATAAATGGAG
FD986294       <-- CAAAGCAGCCAACTTTGATGATTTTCAGTATGCAGCATTAATAAATGGAG
EY922910       <-- CAAAGCAGCCAACTTTGATGATTTTCGGTATGCAGCATTAATAAATGGAG
FD560017       <-- ..................................................
FD986926       --> ..................................................
EX774698       --> CAAAGCAGCCAACTTTGATGATTTTCGGTATGCAGCATTAATAAATGGAG
EY918784       --> CAAAGCAGCCAACTTTGATGATTT..........................
FD982568       --> CAAAGCAGCCAACTTTGATGATTTTCAGTATGCAGCATTAATAAATGGAG
EV530542       --> ..................................................
FD555647       --> CAAAGCAGCCAACTTTGATGATTTTCAGTATGCAGCATTAATAAATGGAG

               1201   -   1251
UN19418        --> ACACTTTTTCAGAGGCAGGTTTTGCTTTGGATGGGGTAGCAGCAGCAGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV525929       <-- ..................................................
FY443437       <-- ACACTTTTTCAGAGGCAGGTTTTGCTTTGGATGGGGTAGCAGCAGCAGCA
FY428188       <-- ACACTTTTTCAGAGGCAGGTTTTGCTTTGGATGGGGTAGCAGCAGCAGCA
FY447691       <-- ACACTTTTTCAGAGGCAGGTTTTGCTTTGGATGGGGTAGCAGCAGCAGCA
FY439463       <-- ACACTTTTTCAGAGGCAGGTTTTGCTTTGGATGGGGTAGCAGCAGCAGCA
EX749838       <-- ACACTTTTTCAGAGGCAGGTTTTGCTTTGGATGGGGTAGCAGCAGCAGCA
EX750187       <-- ACACTTTTTCAGAGGCAGGTTTTGCTTTGGATGGGGTAGCAGCAGCAGCA
EX770519       <-- ACACTTTTTCAGAGGCAGGTTTTGCTTTGGATGGGGTAGCAGCAGCAGCA
HS107039       <-- ACACTTTTTCAGAGGCAGGTTTTGCTTTGGATGGGGTAGCAGCAGCAGCA
FD986294       <-- ACACTTTTTCAGAGGCAGGTTTTGCTTTGGATGGGGTAGCAGCAGCAGCA
EY922910       <-- ACACTTTTTCAGAGGCAGGTTTTGCTTTGGATGGGGTAGCAGCAGCAGCA
FD560017       <-- ..................................................
FD986926       --> ..................................................
EX774698       --> ACACTTTTTCAGAGGCAGGTTTTGCTTTGGATGGGGTAGCAGCAGCAGCA
EY918784       --> ..................................................
FD982568       --> ACACTTTTTCAGAGGCAGGTTTTGCTTTGGATGGGGTAGCAGCAGCAGCA
EV530542       --> ..................................................
FD555647       --> ACACTTTTTCAGAGGCAGGTTTTGCTTTGGATGGGGTAGCAGCAGCAGCA

               1251   -   1301
UN19418        --> GCAGAAACTGATTTGTTCATGGGTTCAGAAGGAATCGGAGGAGCTACTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV525929       <-- ..................................................
FY443437       <-- GCAGAAACTGATTTGTTCATGGGTTCAGAAGGAATCGGAGGAGCTACTGA
FY428188       <-- GCAGAAACTGATTTGTTCATGGGTTCAGAAGGAATCGGAGGAGCTACTGA
FY447691       <-- GCAGAAACTGATTTGTTCATGGGTTCAGAAGGAATCGGAGGAGCTACTGA
FY439463       <-- GCAGAAACTGATTTGTTCATGGGTTCAGAAGGAATCGGAGGAGCTACTGA
EX749838       <-- GCAGAAACTGATTTGTTCATGGGTTCAGAAGGAATCGGAGGAGCTACTGA
EX750187       <-- GCAGAAACTGATTTGTTCATGGGTTCAGAAGGAATCGGAGGAGCTACTGA
EX770519       <-- GCAGAAACTGATTTGTTCATGGGTTCAGAAGGAATCGGAGGAGCTACTGA
HS107039       <-- GCAGAAACTGATTTGTTCATGGGTTCAGAAGGAATCGGAGGAGCTACTGA
FD986294       <-- GCAGAAACTGATTTGTTCATGGGTTCAGAAGGAATCGGAGGAGCTACTGA
EY922910       <-- GCAGAAACTGATTTGTTCATGGGTTCAGAAGGAATCGGAGGAGCTACTGA
FD560017       <-- ...........TTTGTTCATGGGTTCAGAAGGAATCGGAGGAGCTACTGA
FD986926       --> ..................................................
EX774698       --> GCAGAAACTGATTTGTTCATGGGTTCAGAAGGAATCGGAGGAGCTACTGA
EY918784       --> ..................................................
FD982568       --> GCAGAAACTGATTTGTTCAT..............................
EV530542       --> ..................................................
FD555647       --> GCAGAAACTGATTTGTTCATG.............................

               1301   -   1351
UN19418        --> TGGAGAAATATCAGGCACAGGAATGGGAGTTTCGGTCTGTCCAATCTTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV525929       <-- ..................................................
FY443437       <-- TGGAGAAATATCAGGCACAGGAATGGGAGTTTCGGTCTGTCCAATCTTCC
FY428188       <-- TGGAGAAATATCAGGCACAGGAATGGGAGTTTCGGTCTGTCCAATCTTCC
FY447691       <-- TGGAGAAATATCAGGCACAGGAATGGGAGTTTCGGTCTGTCCAATCTTCC
FY439463       <-- TGGAGAAATATCAGGCACAGGAATGGGAGTTTCGGTCTGTCCAATCTTCC
EX749838       <-- TGGAGAAATATCAGGCACAGGAATGGGAGTTTCGGTCTGTCCAATCTTCC
EX750187       <-- TGGAGAAATATCAGGCACAGGAATGGGAGTTTCGGTCTGTCCAATCTTCC
EX770519       <-- TGGAGAAATATCAGGCACAGGAATGGGAGTTTCGGTCTGTCCAATCTTCC
HS107039       <-- TGGAGAAATATCAGGCACAGGAATGGGAGTTTCGGTCTGTCCAATCTTCC
FD986294       <-- TGGAGAAATATCAGGCACAGGAATGGGAGTTTCGGTCTGTCCAATCTTCC
EY922910       <-- TGGAGAAATATCAGGCACAGGAATGGGAGTTTCGGGCTGTCCAATCTTCC
FD560017       <-- TGGAGAAATATCAGGCACAGGAATGGGAGTTTCGGTCTGTCCAATCTTCC
FD986926       --> ..................................................
EX774698       --> TGGAGAAATATCAGGCACAGGAATGGGAGTTTCGGTCTGTCCAATCTTCC
EY918784       --> ..................................................
FD982568       --> ..................................................
EV530542       --> ..................................................
FD555647       --> ..................................................

               1351   -   1401
UN19418        --> GCTTTAAGTTCATCTCGAAATCTCCAACCTTAAGTTTGAGCACAGCAACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV525929       <-- ..................................................
FY443437       <-- GCTTTAAGTTCATCTCGAAATCTCCAACCTTAAGTTTGAGCACAGCAACC
FY428188       <-- GCTTTAAGTTCATCTCGAAATCTCCAACCTTAAGTTTGAGCACAGCAACC
FY447691       <-- GCTTTAAGTTCATCTCGAAATCTCCAACCTTAAGTTTGAGCACAGCAACC
FY439463       <-- GCTTTAAGTTCATCTCGAAATCTCCAACCTTAAGTTTGAGCACAGCAACC
EX749838       <-- GCTTTAAGTTCATCTCGAAATCTCCAACCTTAAGTTTGAGCACAGCAACC
EX750187       <-- GCTTTAAGTTCATCTCGAAATCTCCAACCTTAAGTTTGAGCACAGCAACC
EX770519       <-- GCTTTAAGTTCATCTCGAAATCTCCAACCTTAAGTTTGAGCACAGCAACC
HS107039       <-- GCTTTAAGTTCATCTCGAAATCTCCAACCTTAAGTTTGAGCACAGCAACC
FD986294       <-- GCTTTAAGTTCATCTCGAAATCTCCAACCTTAAGTTTGAGCACAGCAACC
EY922910       <-- GCTTTAAGTTCATCTCGAAATCTCCAACCTTAAGTTTGAGCACAGCAACC
FD560017       <-- GCTTTAAGTTCATCTCGAAATCTCCAACCTTAAGTTTGAGCACAGCAACC
FD986926       --> ..................................................
EX774698       --> GCTTTAAGTTCATCTCGAAATCTCCAACCTTAAGTTTGAGCACAGCAACC
EY918784       --> ..................................................
FD982568       --> ..................................................
EV530542       --> ..................................................
FD555647       --> ..................................................

               1401   -   1451
UN19418        --> TCAGTCTCATCACACATCTCGTGAACCAGTGCCTCCACTTCTTTCGGGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV525929       <-- ..................................................
FY443437       <-- TCAGTCTCATCACACATCTCGTGAACCAGTGCCTCCACTTCTTTCGGGAA
FY428188       <-- TCAGTCTCATCACACATCTCGTGAACCAGTGCCTCCACTTCTTTCGGGAA
FY447691       <-- TCAGTCTCATCACACATCTCGTGAACCAGTGCCTCCACTTCTTTCGGGAA
FY439463       <-- TCAGTCTCATCACACATCTCGTGAACCAGTGCCTCCACTTCTTTCGGGAA
EX749838       <-- TCAGTCTCATCACACATCTCGTGAACCAGTGCCTCCACTTCTTTCGGGAA
EX750187       <-- TCAGTCTCATCACACATCTCGTGAACCAGTGCCTCCACTTCTTTCGGGAA
EX770519       <-- TCAGTCTCATCACACATCTCGTGAACCAGTGCCTCCACTTCTTTCGGGAA
HS107039       <-- TCAGTCTCATCACACATCTCGTGAACCAGTGCCTCCACTTCTTTCGGGAA
FD986294       <-- TCAGTATCATCACACATCTCGTGAACCAGTGCCTCCACTTCTTTCGGGAA
EY922910       <-- TCAGTCTCATCACACATCTCGTGAACCAGTGCCTCCACTTCTTTCGGGAA
FD560017       <-- TCAGTATCATCACACATCTCGTGAACCAGTGCCTCCACTTCTTTCGGGAA
FD986926       --> ..................................................
EX774698       --> TCAGTCTCATCACACATCTCGTGAACCAGTG...................
EY918784       --> ..................................................
FD982568       --> ..................................................
EV530542       --> ..................................................
FD555647       --> ..................................................

               1451   -   1501
UN19418        --> CGTTGTGCGTCGAACAGTACCCTTCCCCGTTGAAGCATCACATGATTCGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV525929       <-- ..................................................
FY443437       <-- CGTTGTGCGTCGAACAGTACCCTTCCCCGTTGAAGCATCACATGATTCGT
FY428188       <-- CGTTGTGCGTCGAACAGTACCCTTCCCCGTTGAAGCATCACATGATTCGT
FY447691       <-- CGTTGTGCGTCGAACAGTACCCTTCCCCGTTGAAGCATCACATGATTCGT
FY439463       <-- CGTTGTGCGTCGAACAGTACCCTTCCCCGTTGAAGCATCACATGATTCGT
EX749838       <-- CGTTGTGCGTCGAACAGTACCCTTCCCCGTTGAAGCATCACATGATTCGT
EX750187       <-- CGTTGTGCGTCGAACAGTACCCTTCCCCGTTGAAGCATCACATGATTCGT
EX770519       <-- CGTTGTGCGTCGAACAGTACCCTTCCCCGTTGAAGCATCACATGATTCGT
HS107039       <-- CGTTGTGCGTCGAACAGTACCCTTCCCCGTTGAAGCATCACATGATTCGT
FD986294       <-- CGTTGTGCGTCGAACAGTACCCTTCCCCGTTGAAGCATCACATGATTCGT
EY922910       <-- CGTTGTGCGTCGAACAGTACCCTTCCCCGTTGAAGCATCACATGATTCGT
FD560017       <-- CGTTGTGCGTCGAACAGTACCCTTCCCCGTTGAAGCATCACATGATTCGT
FD986926       --> ..................................................
EX774698       --> ..................................................
EY918784       --> ..................................................
FD982568       --> ..................................................
EV530542       --> ..................................................
FD555647       --> ..................................................

               1501   -   1551
UN19418        --> CAGTTTTGGTTGTTGTTGTGGAAGATTTAGAGGACTCTGCACGTA--AC-
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV525929       <-- ..................................................
FY443437       <-- CAGTTTTGGTTGTTGTTGTGGAAGATTTAGAGGACTCTGC..........
FY428188       <-- CAGTTTTGGTTGTTGTTGTGGAAGATTTAGAGGACTCTGCACGTA--AC-
FY447691       <-- CAGTTTTGGTTGTTGTTGTGGAAGATTTAGAGGACTCTGCACGTA--AC-
FY439463       <-- CAGTTTTGGTTGTTGTTGTGGAAGATTTAGAGGACTCTGCACGTA--AC-
EX749838       <-- CAGTTTTGGTTGTTGTTGTGGAAGATTTAGAGGACTCTGCACGCA--AC-
EX750187       <-- CAGTTTTGGTTGTTGTTGTGGAAGATTTAGAGGACTCTGCACGCAGCACG
EX770519       <-- CAGTTTTGGTTGTTGTTGTGGAAGATTTAGAGGACTCTGCACGTA--AC-
HS107039       <-- CAGTTTTGGTTGTTGTTGTGGAAGATTTAGAGGACTCTGCACGTA--AC-
FD986294       <-- CAGTTTTGGTTGTTGTTGTGGAAGATTTAGAGGACTCTGCACGTA--AC-
EY922910       <-- CAGTTTTGGTTGTTGTTGTGGAAGATTTAGAGGACTCTGCACGTA--AC-
FD560017       <-- CAGTTTTGGTTGTTGTTGTGGAAGATTTAGAGGACTCTGCACGTA--AC-
FD986926       --> ..................................................
EX774698       --> ..................................................
EY918784       --> ..................................................
FD982568       --> ..................................................
EV530542       --> ..................................................
FD555647       --> ..................................................

               1551   -   1601
UN19418        --> AC---AAGCGTGTACTTGGTGTTCCTGTTGCACAAACTCCACCGTGGCGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV525929       <-- ..................................................
FY443437       <-- ..................................................
FY428188       <-- AC---AAGCGTGTACTTGGTGTTCCTGTTGCACAAACTCCACCGTGGCGC
FY447691       <-- AC---AAGCGTGTACTTGGTGTTCCTGTTGCACAAACTCCACCGTGGCGC
FY439463       <-- AC---AAGCGTGTACTTGGTGTTCCTGTTGCACAAACTCCACCGTGGCGC
EX749838       <-- ACGACAAGCGTGTGCTTGGGGTTCCTGTTGCACAAACTCCACCGTGGCGC
EX750187       <-- AC---AAGCGTGTGCTTGGGGTTCCTGTTGCACAAACTCCACCGTGGCGC
EX770519       <-- AC---AAGCGTGTACTTGGTGTTCCTGTTGCACAAACTCCACCGTGGCGC
HS107039       <-- AC---AAGCGTGTACTTGGTGTTCCTGTTGCACAAACTCCACCGTGGCGC
FD986294       <-- AC---AAGCGTGTACTTGGTGTTCCTGTTGCACAAACTCCACCGTGGCGC
EY922910       <-- AC---AAGCGTGTACTTGGTGTTCCTGTTGCACAAACTCCACCGTGGCGC
FD560017       <-- AC---AAGCGTGTACTTGGTGTTCCTGTTGCACAAACTCCACCGTGGCGC
FD986926       --> ..................................................
EX774698       --> ..................................................
EY918784       --> ..................................................
FD982568       --> ..................................................
EV530542       --> ..................................................
FD555647       --> ..................................................

               1601   -   1651
UN19418        --> ACAAGAATTGCCAGAGGCAGACCAGTTACCAGAAAGCGAGTGAACATTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV525929       <-- ..................................................
FY443437       <-- ..................................................
FY428188       <-- ACAAGAATTGCCAGAGGCAGACCAGTTACCAGAAAGCGAGTGAACATTTA
FY447691       <-- ACAAGAATTGCCAGAGGCAGACCAGTTACCAGAAAGCGAGTGAACATTTA
FY439463       <-- ACAAGAATTGCCAGAGGCAGACCAGTTACCAGAAAGCGAGTGAACATTTA
EX749838       <-- ACAAGAATTGGCAGAGGCAGACCAGTTACCAGAAAGCGAGTGAACATTTA
EX750187       <-- ACAAGAATTGGCAGAGGCAGACCAGTTACCAGAAAGCGAGTGAACATTTA
EX770519       <-- ACAAGAATTGCCAGAGGCAGACCAGTTACCAGAAAGCGAGTGAACATTTA
HS107039       <-- ACAAGAATTGCCAGAGGCAGACCAGTTACCAGAAAGCGAGTGAACATTTA
FD986294       <-- ACAAGAATTGCCAGAGGCAGACCAGTTACCAGAAAGCGAGTGAACATTTA
EY922910       <-- ACAAGAATTGCCAGAGGCAGACCAGTTACCAGAAAGCGAGTGAACATTTA
FD560017       <-- ACAAGAATTGCCAGAGGCAGACCAGTTACCAGAAAGCGAGTGAACATTTA
FD986926       --> ..................................................
EX774698       --> ..................................................
EY918784       --> ..................................................
FD982568       --> ..................................................
EV530542       --> ..................................................
FD555647       --> ..................................................

               1651   -   1701
UN19418        --> TGGAGGAACCAAAAGTCTGAGGGAGAGATCCGAGAGCTGCAGAAGACTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV525929       <-- ..................................................
FY443437       <-- ..................................................
FY428188       <-- TGGAGGAACCAAAAGTCTGAGGG...........................
FY447691       <-- TGGAGGAACCAAAAGTCTGAGGGAGAGA......................
FY439463       <-- TGGAGGAACCAAAAGTCTGAGGGAGAGATCCGAGAGCTGCAGAAGACTCC
EX749838       <-- TTGAGGAACCAAAAGTCTGACGGAGAGATCCGAGAGCTGCAGAAGACTCC
EX750187       <-- TTGAGGAACCAAAAGTCTGACGGAGAGATCCGAGAGCTGCAGAAGACTCC
EX770519       <-- TGGAGGAACCAAAAGTCTGAGGGAGAGATCCGAGAGCTGCAGAAGACTCC
HS107039       <-- TGGAGGAACCAAAAGTCTGAGGGAGAGATCCGAGAGCTGCAGAAGACTCC
FD986294       <-- TGGAGGAACCAAAAGTCTGAGGGAGAGATCCGAGAGCTGCAGAAGACTCC
EY922910       <-- TGGAGGAACCAAAAGTCTGAGGGAGAGATCCGAGAGCTGCAGAAGACTCC
FD560017       <-- TGGAGGAACCAAAAGTCTGAGGGAGAGATCCGAGAGCTGCAGAAGACTCC
FD986926       --> ..................................................
EX774698       --> ..................................................
EY918784       --> ..................................................
FD982568       --> ..................................................
EV530542       --> ..................................................
FD555647       --> ..................................................

               1701   -   1751
UN19418        --> ATTGGAAGAACAAGGCAGCGAGCTAGCTAGAGAAGACTCCACAGAAGCGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV525929       <-- ..................................................
FY443437       <-- ..................................................
FY428188       <-- ..................................................
FY447691       <-- ..................................................
FY439463       <-- ATTGGAAGAACAAGGCAGCGAGCTAGCTAGAGAAGACTCCACAGAAGCGG
EX749838       <-- ATTGGAAGAACAAGGTAGCGAGCTAGCTAG---AGTCTCCACAGAAGCGG
EX750187       <-- ATTGGAAGAACAAGGTAGCGAGCTAGCTAGA---GTCTCCACAGAAGCGG
EX770519       <-- ATTGGAAGAACAAGGCAGCGAGCTAGCTAGAGAAGACTCCACAGAAGCGG
HS107039       <-- ATTGGAAGAACAAGGCcctcgtgc..........................
FD986294       <-- ATTGGAAGAACAAGGCAGCGAGCTAGCTAGAGAAGACTCCACAGAAGCGG
EY922910       <-- ATTGGAAGAACAAGGCAGCGAGCTc.........................
FD560017       <-- ATTGGAAGAACAAGGCAGCGAGCTAGCTAGAGAAGACTCCACAGAAGCGG
FD986926       --> ..................................................
EX774698       --> ..................................................
EY918784       --> ..................................................
FD982568       --> ..................................................
EV530542       --> ..................................................
FD555647       --> ..................................................

               1751   -   1801
UN19418        --> GGGGTGGTTAGTT.....
                   ~~~~~~~~~~~~~~~~~~
EV525929       <-- ..................
FY443437       <-- ..................
FY428188       <-- ..................
FY447691       <-- ..................
FY439463       <-- GGGGTGGTagt.......
EX749838       <-- GGG-TGGTTAGTTaaaaa
EX750187       <-- GGG-TGGTTAGTTcc...
EX770519       <-- GGGGTGGTTAGTT.....
HS107039       <-- ..................
FD986294       <-- GGGGTGGTTAGTT.....
EY922910       <-- ..................
FD560017       <-- GGGGTGGTTAGTT.....
FD986926       --> ..................
EX774698       --> ..................
EY918784       --> ..................
FD982568       --> ..................
EV530542       --> ..................
FD555647       --> ..................