RadishBase

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Alignment for radish unigene UN19442

               1      -     51
UN19442        --> ACACTTGAAGCAAAAACATTGGCTTTAGATTACTTTGGTTTCGTCATCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV537968       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY900395       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY917188       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY908837       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX746570       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY914059       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX754352       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD532503       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD551087       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD538346       --> ACACTTGAAGCAAAAACATTGGCTTTAGATTACTTTGGTTTC-CCATTGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542088       --> ......GAAGCAAAAACATTGGCTTTAGATTACTTTGGTTTCGCCATTGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD576195       --> ......aAAGCAAAAACATTGGCTTTGGATTACTTTGGTTTCGTCATCGA  Raphanus sativus cv Early Scarlet Globe
EX758702       --> .......gAGCAAAAACATTGGCTTTAGATTACTTTGGTTTCGCCATTGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY894307       --> ......ggAGCAAAAACATTGGCTTTAGATTACTTTGGTTTCGTCATCGA  Raphanus raphanistrum subsp. maritimus
FD538506       --> ......ggAGCAAAAACATTGGCTTTAGATTACTTTGGTTTCGCCATTGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW736743       --> ........gGCAAAAACATTGGCTTTGGATTACTTTGGTTTCGTCATCGA  Raphanus sativus cv Rat-Tail Radish #3870
FD574647       --> .........GCAAAAACATTGGCTTTGGATTACTTTGGTTTCGTCATCGA  Raphanus sativus cv Early Scarlet Globe
FD969661       --> ...............................cCTTTGGTTTCGTCATCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY904466       --> ................................................GA  Raphanus raphanistrum subsp. raphanistrum (MS)

               51     -    101
UN19442        --> ACCCATACAACAATCAAAGGGGAAAAATTATACAGAGAGATATTTTTACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV537968       <-- ..................................................
EY900395       <-- ..................................................
EY917188       <-- ..................................................
EY908837       <-- ..................................................
EX746570       <-- ..................................................
EY914059       <-- ..................................................
EX754352       <-- ..................................................
FD532503       <-- ..................................................
FD551087       <-- ..................................................
FD538346       --> ACCCATACAACAATCAAAGGGGAAAAATTATACAGAGAGATATTTTTACT
EV542088       --> ACCCATACAACAATCAAAGGGGAAAAATTATACAGAGAGATATTTTTACT
FD576195       --> ACCCATACAACAATCAAAGGGGAAAAATTATACAGAGAGATATTTTTACT
EX758702       --> ACCCATACAACAATCAAAGGTGAAAAATTATACAGAGAGATATTTTTACT
EY894307       --> ACCCATACAACAATCAAAGGGGAAAAATTATACAGAGAGATATTTTTACT
FD538506       --> ACCCATACAAGAATCAAAGGGGAAAAATTATACAGAGAGATGTTTTTACT
EW736743       --> ACCCATACAACAATCAAAGGGGAAAAATTATACAGAGAGATATTTTTACT
FD574647       --> ACCCATACAACAATCAAAGGGGAAAAATTATACAGAGAGATATTTTTACT
FD969661       --> ACCCATACAACAATCAAAGGGGAAAAATTATACAGAGAGATATTTTTACT
EY904466       --> ACCCATACAACAATCAAAGGGGAAAAATTATACAGAGAGATATTTTTACT

               101    -    151
UN19442        --> TAAGATGTCTCTAAAACTCACTTTTCGCAAGTAAAGGAAAGAAGCACATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV537968       <-- ..................................................
EY900395       <-- ..................................................
EY917188       <-- ..................................................
EY908837       <-- ..................................................
EX746570       <-- ..................................................
EY914059       <-- ..................................................
EX754352       <-- ..................................................
FD532503       <-- ..................................................
FD551087       <-- ..................................................
FD538346       --> TAAGATGTCTCTAAAACTCACTTTTCGCAAGTAAAGGAAAGAAGCACATT
EV542088       --> TAAGATGTCTCTAAAACTCACTTTTCGCAAGTAAAGGAAAGAAGCACATT
FD576195       --> TGGGATGTCTCTAAAACTCACTTTTCGCAAGCAAAGGAAAGAAGCACATT
EX758702       --> TAAGATGTCTCTAAAACTCACTTTTCGCAAGTAAAGGAAAGAAGCACATT
EY894307       --> TAAGATGTCTCTAAAACTCACTTTTCGCAAGTAAAGGAAAGAAGCACATT
FD538506       --> TAAGATGTCTCTAAAACTCACTTTTCGCAAGTAAAGGAAAGAAGCACATT
EW736743       --> TGAGATGTCTCTAAAACTCACTTTTCGCAAGCAAAGGAAAGAAGCACATT
FD574647       --> TGAGATGTCTCTAAAACTCACTTTTCGCAAGCAAAGGAAAGAAGCACATT
FD969661       --> TAAGATGTCTCTAAAACTCACTTCTCGCAAGTAAAGGAAAGAAGCACATT
EY904466       --> TAAGATGTCTCTAAAACTCACTTTTCGCAAGTAAAGGAAAGAAGCACATT

               151    -    201
UN19442        --> TAGAATGCAGAAATGTAGCATAGTGCAAAACAACTATAGTGGAGGGTAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV537968       <-- ..................................................
EY900395       <-- ..................................................
EY917188       <-- ..................................................
EY908837       <-- ..................................................
EX746570       <-- ..................................................
EY914059       <-- ..................................................
EX754352       <-- ..................................................
FD532503       <-- ..................................................
FD551087       <-- ..................................................
FD538346       --> TAGAATGCAGAAATGTAGCATAGTGCAAAACGACTATAGTGGAGGGTAGA
EV542088       --> TAGAATGCAGAAATGTAGCATAGTGCAAAACAACTATAGTGGAGGGTAGA
FD576195       --> TAGAATGCAGAAATGTAGCATAGTGCAAAACAACTACAGTGGAGGGTAGA
EX758702       --> TAGAATGCAGAAATGTAGTATAGTGCAAAACAACTATAGTGGAGGGTAGA
EY894307       --> TAGAATGCAGAAATGTAGCATAGTGCAAAACAACTATAGTGGGGGGTAGA
FD538506       --> TAGAATGCAGAAATGTAGCATAGTGCAAAACAACTATAGTGGAGGGTAGA
EW736743       --> TAGAATGCAGAAATGTAGCATAGTGCAAAACAACTACAGTGGAGGGTAGA
FD574647       --> TAGAATGCAGAAATGTAGCATAGTGCAAAACAACTACAGTGGAGGGTAGA
FD969661       --> TAGAATGCAGAAATGTAGCATAGTGCAAAACAACTACAGTGGAGGGTAGA
EY904466       --> TAGAATGCAGAAATGTAGCATAGTGCAAAACAACTATAGTGGAGGGTAGA

               201    -    251
UN19442        --> AATAGGAAGAGACTGAAAAGCCGAGGAAGAGTAAGCCCCCAACAGTAGCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV537968       <-- ..................................................
EY900395       <-- ..................................................
EY917188       <-- ..................................................
EY908837       <-- ..................................................
EX746570       <-- ..................................................
EY914059       <-- ..................................................
EX754352       <-- ..................................................
FD532503       <-- ..................................................
FD551087       <-- ..................................................
FD538346       --> AATAGGAAGAGACTGAAAAGCCGAGGAAGAGTAAGCCCCCAACAGTAGCG
EV542088       --> AATAGGAAGAGACTGAAAAGCCGAGGAAGAGTAAGCCCCCAACAGTAGCG
FD576195       --> AATAGGAAGAGACTGAAAAGCCGAGGAAGAGTAAGCCCCCAACAGTAGCG
EX758702       --> AATAGGAAGAGACTGAAAAGCCGAGGAAGAGTAAGCCCCCAACAGTAGCG
EY894307       --> AATAGGAAGAGACTGAAAAGCCGAGGAAGAGTAAGCCCCCAACAGTTGCG
FD538506       --> AATAGGAAGAGACTGAAAAGCCGAGGAAGAGTAAGCCCCCAACAGTAGCG
EW736743       --> AATAGGAAGAGACTGAAAGGCCGAGGAAGAGTAAGCCCCCAACAGTAGCG
FD574647       --> AATAGGAAGAGACTGAAAAGCCGAGGAAGAGTAAGCCCCCAACAGTAGCG
FD969661       --> AATAGGAAGAGACTGAAAAGCCGAGGAAGAGTAAGCCCCCAACAGTAGCG
EY904466       --> AATAGGAAGAGACTGAAAAGCCGAGGAAGAGTAAGCCCCCAACAGTAGCG

               251    -    301
UN19442        --> ACCGTGCGTTGTGAGATCCTTGAAGCCAGCATGCTTCCTCCTACAACCGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV537968       <-- ............................................AACCGC
EY900395       <-- ..................................................
EY917188       <-- ..................................................
EY908837       <-- ..................................................
EX746570       <-- ..................................................
EY914059       <-- ..................................................
EX754352       <-- ..................................................
FD532503       <-- ..................................................
FD551087       <-- ..................................................
FD538346       --> ACCGTGCGTTGTGAGATCCTTGAAGCCAGCATGCTTCCTCCTACAACCGC
EV542088       --> ACCGTGCGTTGTGAGATCCTTGAAGCCAGCATGCTTCCTCCTACAACCGC
FD576195       --> ACCGTGCGTTGTGAGATCCTTGAAGCCAACATGCTTCCTCCTACAACCGC
EX758702       --> ACCGTGCGTTGTGAGATCCTTGAAGCCAGCATGCTTCCTCCTACAACCGC
EY894307       --> ACCGTGCGTTGTGAGATCCTTGAAGCCAACATGCTTCCTCCTATAACCGC
FD538506       --> ACCGTGCGTTGTGAGATCCTTGAAGCCAGCATGCTTCCTCCTACAACCGC
EW736743       --> ACCGTGCGTTGTGAGATCCTTGAAGCCAACATGCTTCCTCCTACAACCGC
FD574647       --> ACCGTGCGTTGTGAGATCCTTGAAGCCAACATGCTTCCTCCTACAACCGC
FD969661       --> ACCGTGCGTTGTGAGATCCTTGAAGCCAGCATGCTTCCTCCTACAACCGC
EY904466       --> ACCGTGCGTTGTGAGATCCTTGAAGCCAACATGCTTCCTCCTACAACCGC

               301    -    351
UN19442        --> CAGCGATGTACAAATTGTGTGTCCTACTGATGCCCCTATCGCCACTCCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV537968       <-- CAGCGATGTACAAATTGTGTGTC-TACTGATGCCCCTATCGCCACTCCTA
EY900395       <-- ..................................................
EY917188       <-- ..................................................
EY908837       <-- ..................................................
EX746570       <-- ..................................................
EY914059       <-- ..................................................
EX754352       <-- ..................................................
FD532503       <-- ..................................................
FD551087       <-- ..................................................
FD538346       --> CAGCGATGTACAAATTGTGTGTCCTACTGATGCCCCTATCGCCACTCCTA
EV542088       --> CAGCGATGTACAAATTGTGTGTCCTACTGATGCCCCTATCGCCACTCCTA
FD576195       --> CAGCGATGTACAAATTGTGTGTCCTACTGATGCCCCTATCGCCACTCCTA
EX758702       --> CAGCGATGTACAAATTGTGTGTCCTACTGATGCCCCTATCGCCACTCCTA
EY894307       --> CAGCGATGTACAAATTGTGTGTCCTACTGATGCCCCTATCGCCACTCCTA
FD538506       --> CAGCGATGTACAAATTGTGTGTCCTACTGATGCCCCTATCGCCACTCCTA
EW736743       --> CAGCGATGTACAAATTGTGTGTCCTACTGATGCCCCTATCGCCACTCCTA
FD574647       --> CAGCGATGTACAAATTGTGTGTCCTACTGATGCCCCTATCGCCACTCCTA
FD969661       --> CAGCGATGTACAAATTGTGTGTCCTACTGATGCCCCTATCGCCACTCCTA
EY904466       --> CAGCGATGTACAAATTGTGTGTCCTACTGATGCCCCTATCGCCACTCCTA

               351    -    401
UN19442        --> TAGCGTTCTTGTGCGTCGCCAAAGCTATTGTTGCAATCTGGCTACGGTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV537968       <-- TAGCGTTCTTGTGCGTCGCCAAAGCTATTGTTGCAATCTGGCTACGGTCT
EY900395       <-- ..................................................
EY917188       <-- ..................................................
EY908837       <-- ..................................................
EX746570       <-- ..................................................
EY914059       <-- ..................................................
EX754352       <-- ..................................................
FD532503       <-- ..................................................
FD551087       <-- ..................................................
FD538346       --> TAGCGTTCTTGTGCGTCGCCAAAGCTATTGTTGCAATCTGGCTACGGTCT
EV542088       --> TAGCGTTCTTGTGCGTCGCCAAAGCTATTGTTGCAATCTGGCTACGGTCT
FD576195       --> TAGCGTTCTTGTGCGTCGCCAAAGCTATTGTTGCAATCTGGCTACGGTCT
EX758702       --> TAGCGTTCTTGTGCGTCGCCAAAGCTATTGTTGCAATCTGGCTACGGTCT
EY894307       --> TAGCGTTCTTGTGCGTCGCCAAAGCTATAGTTGCAATCTGGCTACGGTCT
FD538506       --> TAGCGTTCTTGTGCGTCGCCAAAGCTATTGTTGCAATCTGGCTACGGTCT
EW736743       --> TAGCGTTCTTGTGCGTCGCCAAAGCTATTGTTGCAATCTGGCTACGGTCT
FD574647       --> TAGCGTTCTTGTGCGTCGCCAAAGCTATTGTTGCAATCTGGCTACGGTCT
FD969661       --> TAGCGTTCTTGTGCGTCGCCAAAGCTATTGTTGCAATCTGGCTACGGTCT
EY904466       --> TAGCGTTCTTGTGCGTCGCCAAAGCTATTGTTGCAATCTGGCTACGGTCT

               401    -    451
UN19442        --> CCCCATTCGGCTAGAAAGGTTAAGATGAAGGACTCTAGAAATATTGGGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV537968       <-- CCCCATTCGGCTAGAAAGGTTAAGATGAAGGACTCTAGAAATATTGGGGT
EY900395       <-- ..................................................
EY917188       <-- ..................................................
EY908837       <-- ..................................................
EX746570       <-- ..................................................
EY914059       <-- ..................................................
EX754352       <-- ..................................................
FD532503       <-- ..................................................
FD551087       <-- ..................................................
FD538346       --> CCCCATTCGGCTAGAAAGGTTAAGATGAAGGACTCTAGAAATA.......
EV542088       --> CCCCATTCGGCTAGAAAGGTTAAGATGAAGGACTCTAGAAATATTGGGGT
FD576195       --> CCCCATTCGGCTAGAAAGGTTAAGATGAAGGACTCTAGAAATATTGGGGT
EX758702       --> CCCCATTCGGCTAGAAAGGTTAAGATGAAGGACTCTAGAAATATTGGGGT
EY894307       --> CCCCATTCGGCTAGAAAGGTTAAGATGAAGGACTCTAGAAAAATTGGGGT
FD538506       --> CCCCATTCGGCTAGAAAGGTTAAGATGAAGGACTCTAGAAATATTGGGGT
EW736743       --> CCCCATTCGGCTAGAAAGGTTAAGATGAAGGACTCTAGAAATATTGGGGT
FD574647       --> CCCCATTCGGCTAGAAAGGTTAAGATGAAGGACTCTAGAAATATTGGGGT
FD969661       --> CCCCATTCGGCTAGAAAGGTTAAGATGAAGGACTCTAGAAATATTGGGGT
EY904466       --> CCCCATTCGGCTAGAAAGGTTAAGATGAAGGACTCTAGAAATATTGGGGT

               451    -    501
UN19442        --> ACAAAATCTTGAGAAAAAGCGACGGAAGGGTGTCTTCCCTTGGCCTGACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV537968       <-- ACAAAATCTTGAGAAAAAGCGACGGAAGGGTGTCTTCCCTTGGCCTGACT
EY900395       <-- ............................................CTGACT
EY917188       <-- ............................................CTGACT
EY908837       <-- ..........................................gcgTGACT
EX746570       <-- ..............................................GACT
EY914059       <-- ...............................................ACT
EX754352       <-- ..................................................
FD532503       <-- ..................................................
FD551087       <-- ..................................................
FD538346       --> ..................................................
EV542088       --> ACAAAATCTTGAGAAAAAGCGACGGAAGGGTGTCTTCCCTTGGCCTGACT
FD576195       --> ACAAAATCTTGAGAAAAAGCGACGGAAGGGTGTCTTCCCTTGGCCTGACT
EX758702       --> ACAAAATCTTGAGAAAAAGCGACGGAAGGGTGTCTTCCCTTGGCCTGACT
EY894307       --> ACAAAATCTTGAGAAAAAGCGACGGAAGGGTGTCTTCCCTTGGCCTGACT
FD538506       --> ACAAAATCTTGAGAAAAA................................
EW736743       --> ACAAAATCTTGAGAAAAAGCGACGGAAGGGTGTCTTCCCTTGGCCTGACT
FD574647       --> ACAAAATCTTGAGGAAAAGCGACGGAAGGGTGTCTTCCCTTGGCCTGACT
FD969661       --> ACAAAATCTTGAGAAAAAGCGACGGAAGGGTGTCTTCCCTTGGCCTGACT
EY904466       --> ACAAAATCTTGAGAAAAAGCGACGGAAGGGTGTCTTCCCTTGGCCTGACT

               501    -    551
UN19442        --> CAAGCTTCTCCTCAACTTCCTCCATTTCCTTCTTCTGATTCGACTTTGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV537968       <-- CAAGCTTCTCCTCAACTTCCTCCATTTCCTTCTTCTGATTCGACTTTGAA
EY900395       <-- CAAGCTTCTCCTCAACTTCCTCCATTTCCTTCTTTTGATTCGACTTTGAA
EY917188       <-- CAAGCTTCTCCTCAACTTCCTCCATTCCCTTCTTCTGATTCGACTTTGAA
EY908837       <-- CAAGCTTCTCCTCAACTTCCTCCATTTCCTTCTTCTGATTCGACTTTGAA
EX746570       <-- CAAGCTTCTCCTCAACTTCCTCCATTTCCTTCTTTTGATTCGACTTTGAA
EY914059       <-- CAAGCTTCTCCTCAACTTCCTCCATTTCCTTCTTCTGATTCGACTTTGAA
EX754352       <-- ..................................CTGATTCGACTTTGAA
FD532503       <-- .................................ttTGATTCGACTTTGAA
FD551087       <-- ..................................................
FD538346       --> ..................................................
EV542088       --> CAAGCTTCTCCTCAACTTCCTCCATTTCCTTCTTCTGATTCGACTTTGAA
FD576195       --> CAAGCTTCTCCTCAACTTCCTCCATTTCCTTCTTCTGATTCGACTTTGAA
EX758702       --> CAAGCTTCTCCTCAACTTCCTCCATTTCCTTCTTCTGATTCGACTTTGAA
EY894307       --> CAAGCTTCTCCTCAACTTCCTCCATTTCCTTCTTCTGATTCGACTTTGAA
FD538506       --> ..................................................
EW736743       --> CAAGCTTCTCCTCAACTTCCTCCATTTCCTTCTTCTGATTCGACTTTGAA
FD574647       --> CAAGCTTCTCCTCAACTTCCTCCATTTCCTTCTTCTGATTCGACTTTGAA
FD969661       --> CAAGCTTCTCCTCAACTTCCTCCATTTCCTTCTTCTGATTCGACTTTGAA
EY904466       --> CAAGCTTCTCCTCAACTTCCTCCATTTCCTTCTTCTGATTCGACTTTGAA

               551    -    601
UN19442        --> TCAGATGACCTCCAAGCAATGTAGAGAAGTCGTAGACCAAAAAATGCATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV537968       <-- TCAGATGACCTCCAAG-AATGTAGAGAAGTCGTAGACCAAAAAATGCATA
EY900395       <-- TCAGATGACCTCCAAGCAATGTAGAGAAGTCGTAGACCAAAAAATGCATA
EY917188       <-- TCAGATGACCTCCAAGCAATGTAGAGAAGTCGTAGACCAAAAAATGCATA
EY908837       <-- TCAGATGACCTCCAAGCAATGTAGAGAAGTCGTAGACCAAAAAATGCATA
EX746570       <-- TCAGATGACCTCCAAGCAATGTAGAGAAGTCGTAGACCAAAAAATGCATA
EY914059       <-- TCAGATGACCTCCAAGCAATGTAGAGAAGTCGTAGACCAAAAAATGCATA
EX754352       <-- TCAGATGACCTCCAAGCAATGTAGAGAAGTCGTAGACCAAAAAATGCATA
FD532503       <-- TCAGATGACCTCCAAGCAATGTAGAGAAGTCGTAGACCAAAAAATGCATA
FD551087       <-- .............................TCGTAGACCAAAAAATGCATA
FD538346       --> ..................................................
EV542088       --> TCAGATGACCTCCAAG-AATGTAGAGAAGTCGTAGACCAAAAAATGCATA
FD576195       --> TCAGATGACCTCCAAGCAATGTAGAGAAGTCGTAGACCAAAAAATGCATA
EX758702       --> TCAGATGACCTCCAAGCAATGTAGAGAAGTCGTAGACCAAAAAATGCATA
EY894307       --> TCAGATGACCTCCAAGCAATGTAGAGAAGTCGTAGACCAAAAAATGCATA
FD538506       --> ..................................................
EW736743       --> TCAGATGACCTCCAAGCAATGTAGAGAAGTCGTAGACCAAAAAATGCATA
FD574647       --> TCAGATGACCTCCAAGCAATGTAGAGAAGTCGTAGACCAAAAAATGCATA
FD969661       --> TCAGATGACCTCCAAGCAATGTAGAGAAGTCGTAGACCAAAAAATGCATA
EY904466       --> TCAGATGACCTCCAAGCAATGTAGAGAAGTCGTAGACCAAAAAATGCATA

               601    -    651
UN19442        --> GAGAACTGTAGCAGCGCTATTAGTGTGCTTCCTCGAAATCAAGTTTGGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV537968       <-- GAGAACTGCAGCAGCGCTATTGGTGTGCTTCCTCGAAATCAAGTTTGGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY900395       <-- GAGAACTGTAGCAGCGCTATTAGTGTGCTTCCTCCAAATCAAGTTTGGCA  Raphanus raphanistrum subsp. maritimus
EY917188       <-- GAGAACTGTAGCAGCGCTATTAGTGTGCTTCCTCGAAATCAAGTTTGGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY908837       <-- GAGAACTGTAGCAGCGCTATTGGTGTGCTTCCTCGAAATCAAGTTTGGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX746570       <-- GAGAACTGTAGCAGCGCTATTAGTGTGCTTCCTCGAAATCAAGTTTGGCA  Raphanus raphanistrum subsp. maritimus
EY914059       <-- GAGAACTGTAGCAGCGCTATTAGTGTGCTTCCTCGAAATCAAGTTTGGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX754352       <-- GAGAACTGTAGCAGCGCTATTGGTGTGCTTCCTCGAAATCAAGTTTGGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD532503       <-- GAGAACTGTAGCAGCGCTATTAGTGTGCTTCCTCGAAATCAAGTTTGGCA  Raphanus raphanistrum subsp. maritimus
FD551087       <-- GAGAACTGTAGCAGCGCTATTAGTGTGCTTCCTCGAAATCAAGTTTGGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD538346       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542088       --> GAGAACTGCAGCAGCGCTATTGGTGTGCTTCCTCGAAATCAAGTTTGGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD576195       --> GAGAACTGTAGCAGCGCTGTTAGTGTGCTTCCTCGAAATCAAGTTTGGCA  Raphanus sativus cv Early Scarlet Globe
EX758702       --> GAGAACTGTAGCAGCGCTATTGGTGTGCTTCCTCGAAATCAAGTTTGGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY894307       --> GAGAACTGTAGCAGCGCTATTGGTGTGCTTCCTCGAAATCAAGTTTGGCA  Raphanus raphanistrum subsp. maritimus
FD538506       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW736743       --> GAGAACTGTAGCAGCGCTGTTAGTGTGCTTCCTCGAAATCAAGTTTGGCA  Raphanus sativus cv Rat-Tail Radish #3870
FD574647       --> GAGAACTGTAGCAGCGCTGTTAGTGTGCTTCCTCGAAATCAAGTTTGGCA  Raphanus sativus cv Early Scarlet Globe
FD969661       --> GAGAACTGTAGCAGCGCTGTTAGTGTGCTTCCTCGAAATCAAGTTTGGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY904466       --> GAGAACTGTAGCAGCGCTATTGGTGTGCT.....................  Raphanus raphanistrum subsp. raphanistrum (MS)

               651    -    701
UN19442        --> CAATCCTACCAAGTCCAGTGGAAAGTATGGTCATAACAAACAAAGCTGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV537968       <-- CAATCCTACCAAGTCCAGTGGAAAGTATGGTCATAACAAACAAAGCTGAA
EY900395       <-- CAATCCTACCAAGTCCAGTGGAAAGTATGGTCATAACAAACAAAGCTGAA
EY917188       <-- CAATCCTACCAAGTCCAGTGGAAAGTATGGTCATAACAAACAAAGCTGAA
EY908837       <-- CAATCCTACCAAGTCCAGTGGAAAGTATGGTCATAACAAACAAAGCTGAA
EX746570       <-- CAATCCTACCAAGTCCAGTGGAAAGTATGGTCATAACAAACAAAGCTGAA
EY914059       <-- CAATCCTACCAAGTCCAGTGGAAAGTATGGTCATAACAAACAAAGCTGAA
EX754352       <-- CAATCCTACCAAGTCCAGTGGAAAGTATGGTCATAACAAACAAAGCTGAA
FD532503       <-- CAATCCTACCAAGTCCAGTGGAAAGTATGGTCATAACAAACAAAGCTGAA
FD551087       <-- CAATCCTACCAAGTCCAGTGGAAAGTATGGTCATAACAAACAAAGCTGAA
FD538346       --> ..................................................
EV542088       --> CAATCCTACCAAGTCCAGTGGAAAGTATGGTCATAACAAACAAAGCTGAA
FD576195       --> CTATCCTACCAAGTCCAGTGGAAAGTATGGTCATAACAAACAAAGCTGAA
EX758702       --> CAATCCTACCAAGTCCAGTGGAAAGTATGGTCATAACAAACAAAGCTGAA
EY894307       --> CAATCCTA..........................................
FD538506       --> ..................................................
EW736743       --> CTATCCTACCAAGTCCAGTGGAAAGTATGGTCATAACAAACAAAGCTGAA
FD574647       --> CTATCCTACCAAGTCCAGTGGAAAGTATGGTCATAACAAACAAAGCTGAA
FD969661       --> CAATCCTACCAAGTCCAGTGGAAAGTATGGTCATAACAAACAAAGCTGAA
EY904466       --> ..................................................

               701    -    751
UN19442        --> AGAGCACCAGACAAAACAGTAGCTTTCGGGTGTCTCATAGCCATCAGTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV537968       <-- AGAGCACCAGACAAAACAGTAGCTTTCGGGTGTCTCATAGCCATCAGTGC
EY900395       <-- AGAGCACCAGACAAAACAGTAGCTTTCGGGTGTCTCATAGCCATCAGTGC
EY917188       <-- AGAGCAACAGACAAAACAGTAGCTTTCGGGTGTCTCATAGCCATCAGTGC
EY908837       <-- AGAGCACCAGACAAAACAGTAGCTTTCGGGTGTCTCATAGCCATCAGTGC
EX746570       <-- AGAGCACCAGACAAAACAGTAGCTTTCGGGTGTCTCATAGCCATCAGTGC
EY914059       <-- AGAGCACCAGACAAAACAGTAGCTTTCGGGTGTCTCATAGCCATCAGTGC
EX754352       <-- AGAGCACCAGACAAAACAGTAGCTTTCGGGTGTCTCATAGCCATCAGTGC
FD532503       <-- AGAGCACCAGACAAAACAGTAGCTTTCGGGTGTCTCATAGCCATCAGTGC
FD551087       <-- AGAGCACCAGACAAAACAGTAGCTTTCGGGTGTCTCATAGCCATCAGTGC
FD538346       --> ..................................................
EV542088       --> AGAGCACCAGACAAAACAGTAGCTTTCGGGTGTCTCATAGCCATCAGTGC
FD576195       --> AGAGCACCAGACAAAACAGTAGCTTTCGGGTGTCGCATAGCCATCAGTGC
EX758702       --> AGAGCACCAGACAAAACAGTAGCTTTCGGGTGTCTCATAGCCATCAGTGC
EY894307       --> ..................................................
FD538506       --> ..................................................
EW736743       --> AGAGCACCAGACAAAACAGTAGCTTTCGGGTGTCGCATAGCCATCAGTGC
FD574647       --> AGAGCACCAGACAAAACAGTAGCTTTCGGGTGTCGCATAGCCATCAGTGC
FD969661       --> AGAGCACCAGACAAAACAGTAG............................
EY904466       --> ..................................................

               751    -    801
UN19442        --> CGCTATTATGAAAGTCTCATCGCCAATCTCGGTGACAAGTATCATGGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV537968       <-- CGCTATTATGAAAGTCTCATCGCCAATCTCGGTGACAAGTATCATGGAGA
EY900395       <-- CGCTATTATGAAAGTCTCATCGCCAATCTCGGTGACAAGTATCATGGAGA
EY917188       <-- CGCTATTATGAAAGTCTCATCGCCAATCTCGGTGACAAGTATCATGGAGA
EY908837       <-- CGCTATTATGAAAGTCTCATCGCCAATCTCGGTGACAAGTATCATGGAGA
EX746570       <-- CGCTATTATGAAAGTCTCATCGCCAATCTCGGTGACAAGTATCATGGAGA
EY914059       <-- CGCTATTATGAAAGTCTCATCGCCAATCTCGGTGACAAGTATCATGGAGA
EX754352       <-- CGCTATTATGAAAGTCTCATCGCCAATCTCGGTGACAAGTATCATGGAGA
FD532503       <-- CGCTATTATGAAAGTCTCATCGCCAATCTCGGTGACAAGTATCATGGAGA
FD551087       <-- CGCTATTATGAAAGTCTCATCGCCAATCTCGGTGACAAGTATCATGGAGA
FD538346       --> ..................................................
EV542088       --> CGCTATTATGAAAGTCTCATCGCCAATCTCGGTGACAAGTATC.......
FD576195       --> CGCTATTATGAAAGTCTCATCGCCAATCTCGGTGACAAGTATCATGGAGA
EX758702       --> CGCTATTATGAAAGTCTCATCGCCAATCTCGGTGACAAGTATCATGGAGA
EY894307       --> ..................................................
FD538506       --> ..................................................
EW736743       --> CGCTATTATGAAAGTCTCATCGCCAATCTCGGTGACAAGTATCATGGAGA
FD574647       --> CGCTATTATGAAAGTCCCATCGCCAATCTCGGTGACAAGTATCATGGAGA
FD969661       --> ..................................................
EY904466       --> ..................................................

               801    -    851
UN19442        --> AACTCGAAAACAAAGCATCAAAGACACCAGGGCCAGTGCCTTCGAGGTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV537968       <-- AACTCGAAAACAAAGCATCAAA-ACACCAGGGCCAGTGCCTTCGAGGTTG
EY900395       <-- AACTCGAAAACAAAGCATCAAAGACACCAGGGCCAGTGCCTTCGAGGTTG
EY917188       <-- AACTCGAAAACAAAGCATCAAAGACACCAGGGCCAGTGCCTTCGAGGTTG
EY908837       <-- AACTCGAAAACAAAGCATCAAAGACACCAGGGCCAGTGCCTTCGAGGTTG
EX746570       <-- AACTCGAAAACAAAGCATCAAAGACACCAGGGCCAGTGCCTTCGAGGTTG
EY914059       <-- AACTCGAAAACAAAGCATCAAAGACACCAGGGCCAGTGCCTTCGAGGTTG
EX754352       <-- AACTCGAAAACAAAGCATCAAAGACACCAGGGCCAGTGCCTTCGAGGTTG
FD532503       <-- AACTCGAAAACAAAGCATCAAAGACACCAGGGCCAGTGCCTTCGAGGTTG
FD551087       <-- AACTCGAAAACAAAGCATCAAAGACACCAGGGCCAGTGCCTTCGAGGTTG
FD538346       --> ..................................................
EV542088       --> ..................................................
FD576195       --> A.................................................
EX758702       --> AACTCGAAA-CAAAGCATCAAAGAC.........................
EY894307       --> ..................................................
FD538506       --> ..................................................
EW736743       --> AACTCGAAAACAAAGCATCAAAGACACCAGGGCCAGTGCCTT........
FD574647       --> AACTC.............................................
FD969661       --> ..................................................
EY904466       --> ..................................................

               851    -    901
UN19442        --> TTCAAACCAAGATTGTCATCAACTCCGATTCGATCAGTGCCAATCATTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV537968       <-- TTCAAACCAAGATTGTCATCAACTCCGATTCGATCAGTGCCAATCATTCC
EY900395       <-- TTCAAACCAAGATTGTCATCAACTCCGATTCGATCAGTGCCAATCATTCC
EY917188       <-- TTCAAACCAAGATTGTCATCAACTCCGATTCGATCAGTGACAATCATTCC
EY908837       <-- TTCAAACCAAGATTGTCATCAACTCCGATTCGATCAGTGCCAATCATTCC
EX746570       <-- TTCAAACCAAGATTGTCATCAACTCCGATTCGATCAGTGCCAATCATTCC
EY914059       <-- TTCAAACCAAGATTGTCATCAACTCCGATTCGATCAGTGCCAATCATTCC
EX754352       <-- TTCAAACCAAGATTGTCATCAACTCCGATTCGATCAGTGCCAATCATTCC
FD532503       <-- TTCAAACCAAGATTGTCATCAACTCCGATTCGATCAGTGCCAATCATTCC
FD551087       <-- TTCAAACCAAGATTGTCATCAACTCCGATTCGATCAGTGCCAATCATTCC
FD538346       --> ..................................................
EV542088       --> ..................................................
FD576195       --> ..................................................
EX758702       --> ..................................................
EY894307       --> ..................................................
FD538506       --> ..................................................
EW736743       --> ..................................................
FD574647       --> ..................................................
FD969661       --> ..................................................
EY904466       --> ..................................................

               901    -    951
UN19442        --> ACGACGGCCAAGCTCTTTACCAGATCGTTCAGATTCCTGCGTCTCATTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV537968       <-- ACGACGGCCAGGCTCTTTACCAGATCGTTCAGATTCCTGCGTCTCATTAT
EY900395       <-- ACGACGGCCAAGCTCTTTACCAGATCGTTCAGATTCCTGCGTCTCATTAT
EY917188       <-- ACGACGGCCAAGCTCTTTACCAGATCGTTCAGATTCCTGCGTCTCATTAT
EY908837       <-- ACGACGGCCAAGCTCTTTACCAGATCGTTCAGATTCCTGCGTCTCATTAT
EX746570       <-- ACGACGGCCAAGCTCTTTACCAGATCGTTCAGATTCCTGCGTCTCATTAT
EY914059       <-- ACGACGGCCAAGCTCTTTACCAGATCGTTCAGATTCCTGCGTCTCATTAT
EX754352       <-- ACGACGGCCAAGCTCTTTACCAGATCGTTCAGATTCCTGCGTCTCATTAT
FD532503       <-- ACGACGGCCAAGCTCTTTACCAGATCGTTCAGATTCCTGCGTCTCATTAT
FD551087       <-- ACGACGGCCAAGCTCTTTACCAGATCGTTCAGATTCCTGCGTCTCATTAT
FD538346       --> ..................................................
EV542088       --> ..................................................
FD576195       --> ..................................................
EX758702       --> ..................................................
EY894307       --> ..................................................
FD538506       --> ..................................................
EW736743       --> ..................................................
FD574647       --> ..................................................
FD969661       --> ..................................................
EY904466       --> ..................................................

               951    -   1001
UN19442        --> CAACCCCAGAAGAATCCTGCGCAGAGATGGCGGAAATGAAGATGAAGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV537968       <-- CAACCCCAG---AATCCTGCGCAGAGATGGCGGAAATGAAGATGAAGAAG
EY900395       <-- CAACCCCAGAAGAATCCTGCGCAGAGATGGCGGAAATGAAGATGAAGAAG
EY917188       <-- CAACCCCAGAAGAATCCTGCGCAGAGATGGCGGAAATGAAGATGAAGAAG
EY908837       <-- CAACCCCAG---AATCCTGCGCAGAGATGGCGGAAATGAAGATGAAGAAG
EX746570       <-- CAACCCCAGAAGAATCCTGCGCAGAGATGGCGGAAATGAAGATGAAGAAG
EY914059       <-- CAACCCCAGAAGAATCCTGCGCAGAGATGGCGGAAATGAAGATGAAGAAG
EX754352       <-- CAACCCCAG---AATCCTGCGCAGAGATGGCGGAAATGAAGATGAAGAAG
FD532503       <-- CAACCCCAGAAGAATCCTGCGCAGAGATGGCGGAAATGAAGGTGAAGAAG
FD551087       <-- CAACCCC-GAAGAATCCTGCGCAGAGATGGCGGAAATGAAGATGAAGAAG
FD538346       --> ..................................................
EV542088       --> ..................................................
FD576195       --> ..................................................
EX758702       --> ..................................................
EY894307       --> ..................................................
FD538506       --> ..................................................
EW736743       --> ..................................................
FD574647       --> ..................................................
FD969661       --> ..................................................
EY904466       --> ..................................................

               1001   -   1051
UN19442        --> AAGAAGACGAGAAGCAGGCGGCGGGTGATGAAACCCATGAGGTGATGCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV537968       <-- AAGAAGACGAGAAGCAGGCGGCGGGTGATGAAACCCATGAGGTGATGCGA
EY900395       <-- AAGAAGACGAGAAGCAGGCGGCGGGTGATGAAACCCATGAGGTGATGCGA
EY917188       <-- AAGAAGACGAGAAGCAGGCGGCGGGTGATGAAACCCATGAGGTGATGCGA
EY908837       <-- AAGAAGACGAGAGGCAGGCGGCGGGTGATGAAACCCATGAGGTGATGCGA
EX746570       <-- AAGAAGACGAGAAGCAGGCGGCGGGTGATGAAACCCATGAGGTGATGCGA
EY914059       <-- AAGAAGACGAGAAGCAGGCGGCGGGTGATGAAACCCATGAGGTGATGCGA
EX754352       <-- AAGAAGACGAGAAGCAGGCGGCGGGTGATGAAACCCATGAGGTGATGCGA
FD532503       <-- AAGAAGACAAGAAGCAGGCGGCGGGTGATGAAACCCATGAGGTGATGCGA
FD551087       <-- AAGAAGACGAGAAGCAGGAGGCGGGTGATGAAACCCATAAGGTGATGCGA
FD538346       --> ..................................................
EV542088       --> ..................................................
FD576195       --> ..................................................
EX758702       --> ..................................................
EY894307       --> ..................................................
FD538506       --> ..................................................
EW736743       --> ..................................................
FD574647       --> ..................................................
FD969661       --> ..................................................
EY904466       --> ..................................................

               1051   -   1101
UN19442        --> GAGTAGAACAGATCTGTGATTGACCGACGAATACGTTTCAATTTCTAAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV537968       <-- GAGTAGAACAGATCTGTGATCGACCGACGAATACGTTTCAATTTCTAAAT
EY900395       <-- GAGTAGAACAGATCTGTGATTGACCGACGAATACGTTTCAATTTCTAAAT
EY917188       <-- GAGTAGAACAGATCTGTGATTGACCGACGAATACGTTTCAATTTCTAAAT
EY908837       <-- GAGTAGAACAGATCTGTGATTGACCGACGAATACGTTTCAATTTCTAAAT
EX746570       <-- GAGTAGAACAGATCTGTGATTGACCGACGAATACGTTTCAATTTCTAAAT
EY914059       <-- GAGTAGAACAGATCTGTGATTGACCGACGAATACGTTTCAATTTCTAAAT
EX754352       <-- GAGTAGAACAGATCTGTGATTGACCGACGAATACGTTTCAATTTCTAAAT
FD532503       <-- GAGTAGAACAGATCTGTGATTGACCGACGAATACGTTTCAATTTCTAAAT
FD551087       <-- GAGTAGAACAGATCTGTGATTGACCGACGAATACGTTTCAATTTCTAAAT
FD538346       --> ..................................................
EV542088       --> ..................................................
FD576195       --> ..................................................
EX758702       --> ..................................................
EY894307       --> ..................................................
FD538506       --> ..................................................
EW736743       --> ..................................................
FD574647       --> ..................................................
FD969661       --> ..................................................
EY904466       --> ..................................................

               1101   -   1151
UN19442        --> CTGAGAAAGTATGAGACGTTGGGATCTGAGAAAAAGGTTATATAAATGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV537968       <-- CTc...............................................
EY900395       <-- CTGAGAAAGaatcc....................................
EY917188       <-- CTcc..............................................
EY908837       <-- CTGAGAAAGTATcc....................................
EX746570       <-- CTGAGAAAGaatcc....................................
EY914059       <-- CTGAGAAAGaatcc....................................
EX754352       <-- CTGAGAAAGTATGAGACGTTGGGATCTGAGAAAAAGGTTATATAAATGTA
FD532503       <-- CTGAGAAAGaatcc....................................
FD551087       <-- CTGAGAAAGaatcc....................................
FD538346       --> ..................................................
EV542088       --> ..................................................
FD576195       --> ..................................................
EX758702       --> ..................................................
EY894307       --> ..................................................
FD538506       --> ..................................................
EW736743       --> ..................................................
FD574647       --> ..................................................
FD969661       --> ..................................................
EY904466       --> ..................................................

               1151   -   1201
UN19442        --> CTTACGAGTTACGATTCCC
                   ~~~~~~~~~~~~~~~~~~~
EV537968       <-- ...................
EY900395       <-- ...................
EY917188       <-- ...................
EY908837       <-- ...................
EX746570       <-- ...................
EY914059       <-- ...................
EX754352       <-- CTTACGAGTTACGATTCCC
FD532503       <-- ...................
FD551087       <-- ...................
FD538346       --> ...................
EV542088       --> ...................
FD576195       --> ...................
EX758702       --> ...................
EY894307       --> ...................
FD538506       --> ...................
EW736743       --> ...................
FD574647       --> ...................
FD969661       --> ...................
EY904466       --> ...................