-2     -     48
UN19530        --> ...GGTTCT-CTCGACGTTCTTCAAGCCC-AAGGTAAGAGTACATCACAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD536878       <-- ..gGGTTCTTCTCGACGTTCTTCAAGCCT-AAGGTAAGAGTACATCACAG
FD574382       <-- ..gGGTTCT-CTCGACGTTCTTCAAGCCC-AAGGTAAGAGTACATCACAG
EX898886       <-- ggctGTTCT-CTCGACGTTCTTCAAGCCC-AAGGTAAGAGTACATCACAG
FD567671       <-- ..............ACGTTCTTCAAGCCCTAAGGTAAGAGTACATCACAG
EW728851       <-- ......................CAAGCCC-AAGGTAAGAGTACATCACAG
EW724259       --> ...GGTTCT-CTCGACGTTCTTCAAGCCC-AAGGTAAGAGTACATCACAG
FD540358       --> ..gGGTTCTTCTCGACGTTCTTCAAGCCT-AAGGTAAGAGTACATCACAG
FD564106       --> ..gGGTTCT-CTCGACGTTCTTCAAGCCCTAAGGTAAGAGTACATCACAG
FD569553       --> ..gGGTTCT-CTCGACGTTCTTCAAGCCC-AAGGTAAGAGTACATCACAG
FD570359       --> ..gGGTTCT-CTCGACGTTCTTCAAGCCC-AAGGTAAGAGTACATCACAG
EX894571       --> ggctGTTCT-CTCGACGTTCTTCAAGCCC-AAGGTAAGAGTACATCACAG
EY939008       --> ggctGTTCT-CTCGACGTTCTTCAAGCCC-AAGGTAAGAGTACATCACAG

               48     -     98
UN19530        --> -ACAAAAGAGAAGATGTCTGAGAAAAAGGGAAGGAAAGAGGAAGTGGTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD536878       <-- GACAAAAGAGAAGATGTCTGAGAAAAAGGGAAGGAAAGAGGAAGTGGTGA
FD574382       <-- -ACAAAAGAGAAGATGTTTGAGAAAAAGGGAAGGAAAGAGGAAGTGGTGA
EX898886       <-- -ACAAAAGAGAAGATGTCTGAGAAAAAGGGAAGGAAAGAGGAAGTGGTGA
FD567671       <-- -ACAAA-GAGAAGATGTTTGAGAAAAAGGGAAGGAAAGAGGAAGTGGTGA
EW728851       <-- -ACAAAAGAGAAGATGTTTGAGAAAAAGGGAAGAAAAGAGGAGGTGGTGA
EW724259       --> -ACAAAAGAGAAGATGTCTGAGAAAAAGGGAAGGAAAGAGGAGGTGGTGA
FD540358       --> GACAAAAGAGAAGATGTCTGAGAAAAAGGGAAGGAAAGAGGAAGTGGTGA
FD564106       --> -ACAAA-GAGAAGATGTCTGAGAAAAAGGGAAGGAAAGAGGAAGTGGTGA
FD569553       --> -ACAAAAGAGAAGATGTCTGAGAAAAAGGGAAGGAAAGAGGAAGTGGTGA
FD570359       --> -ACAAAAGAGAAGATGTCTGAGAAAAAGGGAAGGAAAGAGGAAGTGGTGA
EX894571       --> -ACAAAAGAGAAGATGTCTGAGAAAAAGGGAAGGAAAGAGGAAGTGGTGA
EY939008       --> -ACAAAAGAGAAGATGTCTGAGAAAAAGGGAAGGAAAGAGGAAGTGGTGA

               98     -    148
UN19530        --> CCAGAGAGTACACCATCAACCTCCACAGACGCCTCCACAGCTGCACCTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD536878       <-- CCAGAGAGTACACCATCAACCTCCACAGACGCCTCCACAGCTGCACCTTT
FD574382       <-- CCAGAGAGTACACCATCAACCTCCACAGACGCCTCCACAGCTGCACCTTT
EX898886       <-- CCAGAGAGTACACTATCAACCTCCACAGACGCCTCCACAGCTGCACCTTT
FD567671       <-- CCAGAGAGTACACCATCAACCTCCACAGACGCCTCCACAGCTGCACCTTT
EW728851       <-- CCAGAGAGTACACCATCAACCTCCACAGACGCCTCCACAGCTGCACCTTT
EW724259       --> CCAGAGAGTACACCATCAACCTCCACAGACGCCTCCACAGCTGCACCTTT
FD540358       --> CCAGAGAGTACACCATCAACCTCCACAGACGCCTCCACAGCTGCACCTTT
FD564106       --> CCAGAGAGTACACCATCAACCTCCACAGACGCCTCCACAGCTGCACCTTT
FD569553       --> CCAGAGAGTACACCATCAACCTCCACAGACGCCTCCACAGCTGCACCTTT
FD570359       --> CCAGAGAGTACACCATCAACCTCCACAGACGCCTCCACAGCTGCACCTTT
EX894571       --> CCAGAGAGTACACTATCAACCTCCACAGACGCCTCCACAGCTGCACCTTT
EY939008       --> CCAGAGAGTACACCATCAACCTCCACAGACGCCTCCACAGCTGCACCTTT

               148    -    198
UN19530        --> AAGAAGAAGGCACCAAAGGCCATCAAGGAGATCAGGAAGTTTGCAGAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD536878       <-- AAGAAGAAGGCACCAAAGGCCATCAAGGAGATCAGGAAGTTTGCCGAGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD574382       <-- AAGAAGAAGGCACCAAAGGCCATCAAGGAGATCAGGAAGTTTGCAGAGAA  Raphanus sativus cv Early Scarlet Globe
EX898886       <-- AAGAAGAAGGCACCAAAGGCCATCAAGGAGATCAGGAAGTTTGCAGAGAA  Raphanus sativus cv Early Scarlet Globe
FD567671       <-- AAGAAGAAGGCACCAAAGGCCATCAAGGAGATCAGGAAGTTTGCCGAGAA  Raphanus sativus var. oleiformis
EW728851       <-- AAGAAGAAGGCACCAAAGGCCATCAAGGAGATCAGGAAGTTTGCAGAGAA  Raphanus sativus cv Early Scarlet Globe
EW724259       --> AAGAAGAAGGCACCAAAGGCCATCAAGGAGATCAGGAAGTTTGCAGAGAA  Raphanus sativus cv Early Scarlet Globe
FD540358       --> AAGAAGAAGGCACCAAAGGCCATCAAGGAGATCAGGAAGTTTGCCGAGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD564106       --> AAGAAGAAGGCACCAAAGGCCATCAAGGAGATCAGGAAGTTTGCCGAGAA  Raphanus sativus var. oleiformis
FD569553       --> AAGAAGAAGGCACCAAAGGCCATCAAGGAGATCAGGAAGTTTGCAGAGAA  Raphanus sativus cv Early Scarlet Globe
FD570359       --> AAGAAGAAGGCACCAAAGGCCATCAAGGAGATCAGGAAGTTTGCAGAGAA  Raphanus sativus cv Early Scarlet Globe
EX894571       --> AAGAAGAAGGCACCAAAGGCCATCAAGGAGATCAGGAAGTTTGCAGAGAA  Raphanus sativus cv Early Scarlet Globe
EY939008       --> AAGAAGAAGGCACCAAAGGCCATCAAGGAGATCAGGAAGTTTGCAGAGAA  Raphanus sativus cv Early Scarlet Globe

               198    -    248
UN19530        --> AGCCATGGGGACAAAAGACGTTAGGGTGGACGTGAAGTTGAACAAGCAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD536878       <-- GGCCATGGGGACAAAGGACGTTAGGGTGGACGTGAAGTTGAACAAGCGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD574382       <-- AGCCATGGGGACAAAAGACGTTAGGGTGGACGTGAAGTTGAACAAGCAGA  Raphanus sativus cv Early Scarlet Globe
EX898886       <-- AGCCATGGGGACAAAAGACGTTAGGGTGGACGTGAAGTTGAACAAGCAGA  Raphanus sativus cv Early Scarlet Globe
FD567671       <-- AGCCATGGGGACAAAGGACGTTAGGGTGGACGTGAAGTTGAACAAGCAGA  Raphanus sativus var. oleiformis
EW728851       <-- AGCCATGGGGACAAAAGACGTTAGGGTGGACGTGAAGTTGAACAAGCAGA  Raphanus sativus cv Early Scarlet Globe
EW724259       --> AGCCATGGGGACAAAAGACGTTAGGGTGGACGTGAAGTTGAACAAGCAGA  Raphanus sativus cv Early Scarlet Globe
FD540358       --> GGCCATGGGGACAAAGGACGTTAGGGTGGACGTGAAGTTGAACAAGCGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD564106       --> AGCCATGGGGACAAAGGACGTTAGGGTGGACGTGAAGTTGAACAAGCAGA  Raphanus sativus var. oleiformis
FD569553       --> AGCCATGGGGACAAAAGACGTTAGGGTGGACGTGAAGTTGAACAAGCAGA  Raphanus sativus cv Early Scarlet Globe
FD570359       --> AGCCATGGGGACAAAAGACGTTAGGGTGGACGTGAAGTTGAACAAGCAGA  Raphanus sativus cv Early Scarlet Globe
EX894571       --> AGCCATGGGGACAAAAGACGTTAGGGTGGACGTGAAGTTGAACAAGCAGA  Raphanus sativus cv Early Scarlet Globe
EY939008       --> AGCCATGGGGACAAAAGACGTTAGGGTGGACGTGAAGTTGAACAAGCATA  Raphanus sativus cv Early Scarlet Globe

               248    -    298
UN19530        --> TATGGAGCAAAGGAATCAGAGGTCCTCCAAGGAGGATTAGGGTCCGTGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD536878       <-- TATGGAGCAAAGGAATCAGAGGTCCTCCAAGGAGGATTAGGGTCCGTGTT
FD574382       <-- TATGGAGCAAAGGAATCAGAGGTCCTCCAAGGAGGATTAGGGTCCGTGTT
EX898886       <-- TATGGAGCAAAGGAATCAGGGGTCCTCCAAGGAGGATTAGGGTCCGTGTT
FD567671       <-- TATGGAGCAAAGGAATCAGAGGTCCTCCAAGAAGGATTAGGGTCCGTGTT
EW728851       <-- TATGGAGCAAAGGAATCAGAGGTCCTCCAAGGAGGATTAGGGTCCGTGTT
EW724259       --> TATGGAGCAAAGGAATCAGAGGTCCTCCAAGGAGGATTAGGGTCCGTGTT
FD540358       --> TATGGAGCAAAGGAATCAGAGGTCCTCCAAGGAGGATTAGGGTCCGTGTT
FD564106       --> TATGGAGCAAAGGAATCAGAGGTCCTCCAAGAAGGATTAGGGTCCGTGTT
FD569553       --> TATGGAGCAAAGGAATCAGAGGTCCTCCAAGGAGGATTAGGGTCCGTGTT
FD570359       --> TATGGAGCAAAGGAATCAGAGGTCCTCCAAGGAGGATTAGGGTCCGTGTT
EX894571       --> TATGGAGCAAAGGAATCAGGGGTCCTCCAAGGAGGATTAGGGTCCGTGTT
EY939008       --> TATGGAGCAAAGGAATCAGAGGTCCTCCAAGGAGGATTAGGGTCCGTGTT

               298    -    348
UN19530        --> GCGCGCAAGAGAAACGACGACGAAGACGCCAAGGAAGAGTTTTTCTCACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD536878       <-- GCGCGCAAGAGAAACGACGACGAAGACGCAAAGGAGGAGTTTTTCTCACT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD574382       <-- GCGCGCAAGAGAAACGACGACGAAGACGCCAAGGAAGAGTTTTTCTCACT  Raphanus sativus cv Early Scarlet Globe
EX898886       <-- GCGCGCAAGAGAAACGACGACGAAGACGCCAAGGAAGAGTTTTTCTCACT  Raphanus sativus cv Early Scarlet Globe
FD567671       <-- GCGCGCAAGAGAAACGACGACGAAGACGCAAAGGAAGAGTTTTTTTCACT  Raphanus sativus var. oleiformis
EW728851       <-- GCGCGCAAGAGAAACGACGACGAAGACGCCAAGGAAGAGTTTTTCTCACT  Raphanus sativus cv Early Scarlet Globe
EW724259       --> GCGCGCAAGAGAAACGACGACGAAGACGCCAAGGAAGAGTTTTTCTCACT  Raphanus sativus cv Early Scarlet Globe
FD540358       --> GCGCGCAAGAGAAACGACGACGAAGACGCAAAGGAGGAGTTTTTCTCACT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD564106       --> GCGCGCAAGAGAAACGACGACGAAGACGCAAAGGAAGAGTTTTTCTCACT  Raphanus sativus var. oleiformis
FD569553       --> GCGCGCAAGAGAAACGACGACGAAGACGCCAAGGAAGAGTTTTTCTCACT  Raphanus sativus cv Early Scarlet Globe
FD570359       --> GCGCGCAAGAGAAACGACGACGAAGACGCCAAGGAAGAGTTTTTCTCACT  Raphanus sativus cv Early Scarlet Globe
EX894571       --> GCGCGCAAGAGAAACGACGACGAAGACGCCAAGGAAGAGTTTTTCTCACT  Raphanus sativus cv Early Scarlet Globe
EY939008       --> GCGCGCAAGAGAAACGACGACGAAGACGCCAAGGAAGAGTTTTTCTCACT  Raphanus sativus cv Early Scarlet Globe

               348    -    398
UN19530        --> TGTTACCGTTGCTGAGATCCCTGCTGAAGGACTCAGCGGACTTGGCACTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD536878       <-- CGTGACTGTTGCTGAGATCCCTGCTGAAGGACTCAGCGGACTTGGCACTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD574382       <-- TGTTACCGTTGCTGAGATCCCTGCTGAAGGACTCAGCGGACTTGGCACTA  Raphanus sativus cv Early Scarlet Globe
EX898886       <-- TGTTACCGTTGCTGAGATCCCTGCTGAAGGACTCAGCGGACTTGGCACTA  Raphanus sativus cv Early Scarlet Globe
FD567671       <-- CGTGACTGTTGCTGAGATCCCTGCTGAAGGACTCAGTGGACTTGGCACTA  Raphanus sativus var. oleiformis
EW728851       <-- TGTTACCGTTGCTGAGATCCCTGCTGAAGGACTCAGCGGACTTGGCACTA  Raphanus sativus cv Early Scarlet Globe
EW724259       --> TGTTACCGTTGCTGAGATCCCTGCTGAAGGACTCAGCGGACTTGGCACTA  Raphanus sativus cv Early Scarlet Globe
FD540358       --> CGTGACTGTTGCTGAGATCCCTGCTGAAGGACTCAGCGGACTTGGCACTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD564106       --> CGTGACTGTTGCTGAGATCCCTGCTGAAGGACTCAGTGGACTTGGCACTA  Raphanus sativus var. oleiformis
FD569553       --> TGTTACCGTTGCTGAGATCCCTGCTGAAGGACTCAGCGGACTTGGCACTA  Raphanus sativus cv Early Scarlet Globe
FD570359       --> TGTTACCGTTGCTGAGATCCCTGCTGAAGGACTCAGCGGACTTGGCACTA  Raphanus sativus cv Early Scarlet Globe
EX894571       --> TGTTACCGTTGCTGAGATCCCTGCTGAAGGACTCAGCGGACTTGGCACTA  Raphanus sativus cv Early Scarlet Globe
EY939008       --> TGTTACCGTTGCTGAGATCCCTGCTGAAGGACTCAGCGGACTTGGCACTA  Raphanus sativus cv Early Scarlet Globe

               398    -    448
UN19530        --> AGGTCATCGATGAGGAGGATTGAGAAGGGACTAGTCCTGTCATTTAGACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD536878       <-- AGGTCATCGATGAGGAGGATTGAGAAGGGACTAGTCCTGTCATTTAGACA
FD574382       <-- AGGTCATCGATGAGGAGGATTGAGAAGGGACTAGTCCTGTCATTTAGACA
EX898886       <-- AGGTCATCGATGAGGAGGATTGAGAAGGGACTAGTCCTGTCATTTAGACA
FD567671       <-- AGGTCATCGATGAGGAGGATTGAGAAGGGACTAGTCCTGTCATTTAGACA
EW728851       <-- AGGTCATCGATGAGGAGGATTGAGAAGGGACTAGTCCTGTCATTTAGACA
EW724259       --> AGGTCATCGATGAGGAGGATTGAGAAGGGACTAGTCCTGTCATTTAGACA
FD540358       --> AGGTCATCGATGAGGAGGATTGAGAAGGGACTAGTCCTGTCATTTAGACA
FD564106       --> AGGTCATCGATGAGGAGGATTGAGAAGGGACTAGTCCTGTCATTTAGACA
FD569553       --> AGGTCATCGATGAGGAGGATTGAGAAGGGACTAGTCCTGTCATTTAGACA
FD570359       --> AGGTCATCGATGAGGAGGATTGAGAAGGGACTAGTCCTGTCATTTAGACA
EX894571       --> AGGTCATCGATGAGGAGGATTGAGAAGGGACTAGTCCTGTCATTTAGACA
EY939008       --> AGGTCATCGATGAGGAGGATTGAGAAGGGACTAGTCCTGTCATTTAGACA

               448    -    498
UN19530        --> AGTTTTGTGGGTTTTT-AAAAAA-TTTCTTGTTGTTTTCGTTCGAAAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD536878       <-- AGTTTTGTGGGTTTTTTAAAAAA-ATTCTTGTTGTTTTCGTTCAAAAAAA
FD574382       <-- AGTTTTGTGGGTTTTT-AAAAAA-TTTCTTGTTGTTTTCGTTCGAAAAAA
EX898886       <-- AGTTTTGTGGGTTTTT-AAAAAA-TTTCTTGTTGTTTTCGTTCGAAAAAA
FD567671       <-- AGTTTTGTGGGTTTTT-AAAAAAATTTCTTGTTGTTTTCGTTCAAAAAAA
EW728851       <-- AGTTTTGTGGGTTTTT-AAAAAA-TTTCTTGTTGTTTTCGTTCGAAAAAA
EW724259       --> AGTTTTGTGGGTTTTT-AAAAAA-TTTCTTGTTGTTTTCGTTCGAAAAAA
FD540358       --> AGTTTTGTGGGTTTTTTAAAAAA-ATTCTTGTTGTTTTCGTTCAAAAAAA
FD564106       --> AGTTTTGTGGGTTTTT-AAAAAAa..........................
FD569553       --> AGTTTTGTGGGTTTTT-AAAAAA-TTTCTTGTTGTTTTCGTTCGAAAAAA
FD570359       --> AGTTTTGTGGGTTTTT-AAAAAA-TTTCTTGTTGTTTTCGTTCGAAAAAA
EX894571       --> AGTTTTGTGGGTTTTT-AAAAAA-TTTCTTGTTGTTTTCGTTCGAAAAAA
EY939008       --> AGTTTTGTGGGTTTTT-AAAAAA-TTTCTTGTTGTTTTCGTTCGAAAAAA

               498    -    548
UN19530        --> ATCTTCGGTATTTTCTTTGTAGTATGACTTCGCAATGCCTAATGCAGTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD536878       <-- ATCTTCGGTATTTTCTTTGTAGTATGACTTCGCAATGCCTAATGCAGTTT
FD574382       <-- ATCTTCGGTATTTTCTTTGTAGTATGACTTCGCAATGCCTAATGCAGTTT
EX898886       <-- ATCTTCGGTATTTTCTTTGTAGTATGACTTCGCAATGCCTAATGCAGTTT
FD567671       <-- ATTTTCGGTATTTTCTTTGTAGTATGACTTCGCAATGCCTAATGCAGTTT
EW728851       <-- ATTTTCGGTATTTTCTTTGTAGTATGACTTCGCAATGCCTAATGCAGTTT
EW724259       --> ATCTTCGGTATTTTCTTTGTAGTATGACTTCGCAATGCCTAATGCAGTTT
FD540358       --> ATCTTCGGTATTTTCTTTGTAGTATGACTTCGCAATGCCTAATGCAGTTT
FD564106       --> ..................................................
FD569553       --> A.................................................
FD570359       --> ATCTTCGGTATTTTCTTTGTAGTATGACTTCGCAATGCCTAATGCAGTTT
EX894571       --> ATCTTCGGTATTTTCTTTGTAGTATGACTTCGCAATGCCTAATGCAGTTT
EY939008       --> ATCTTCGGTATTTTCTTTGTAGTATGACTTCGCAATGCCTAATGCAGTTT

               548    -    598
UN19530        --> ATTGGAAAGACCTTGAGATGAACCTGTTTGTGTTCTTGTCTTCTGCATTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD536878       <-- ATTGGAAAGACCTTGAGAcg..............................
FD574382       <-- ATTGGAAAGACCTTGAGATGAACTTGTTTGTGTT................
EX898886       <-- ATTGGAAAGACCTTGAGATGAACCTGTTTGTGTTCTTGTTTTCTGCATTT
FD567671       <-- ATTGGAAAGACCTTGAGATG..............................
EW728851       <-- ATTGGAAAGACCTTGAGATGAACCTGTTTGTGTTCCTGTCTTCTGCATT.
EW724259       --> ATTGGAAAGACCTTGAGATGAACCTGTTTGTGTTCCTGTCTTCTGCATTT
FD540358       --> ATTGGAAAGACCTTGAGAcg..............................
FD564106       --> ..................................................
FD569553       --> ..................................................
FD570359       --> ATTGGAAAGACCTTGAGATGAACTTGTTTGTGTT................
EX894571       --> ATTGGAAAGACCTTGAGATGAACCTGTTTGTGTTCTTGTCTTCTGCATTT
EY939008       --> ATTGGAAAGACCTTGAGATG..............................

               598    -    648
UN19530        --> TATTTGAAATTTGCTAATAATCAGGGTGTATTTGAGTTTTGTTTATGCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD536878       <-- ..................................................
FD574382       <-- ..................................................
EX898886       <-- TATTTGAAATTTGCTAATAATCAGGGTGTATTTGAGTTTTGTTTATGCAA
FD567671       <-- ..................................................
EW728851       <-- ..................................................
EW724259       --> ..................................................
FD540358       --> ..................................................
FD564106       --> ..................................................
FD569553       --> ..................................................
FD570359       --> ..................................................
EX894571       --> TATTTGAAATTTGCTAATAATCAGGGTGTATCTGAGTTTTGTTTATGCAA
EY939008       --> ..................................................

               648    -    698
UN19530        --> ACAAATCTACCTAAGCAGAGCTTCGGTTTGAAACGTAATTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD536878       <-- ..........................................
FD574382       <-- ..........................................
EX898886       <-- ACAAATCTACCTAAGCAGAGCTTCGGTTTGAAACGTAATTAT
FD567671       <-- ..........................................
EW728851       <-- ..........................................
EW724259       --> ..........................................
FD540358       --> ..........................................
FD564106       --> ..........................................
FD569553       --> ..........................................
FD570359       --> ..........................................
EX894571       --> ACAAATCTACCTAAGCAGAGCTTCGGTTTGAAACGTAATT..
EY939008       --> ..........................................