RadishBase

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Alignment for radish unigene UN19532

               1      -     51
UN19532        --> GGATCTCTTTACAGACCATGTTTCTGTAAACCAGAGAGGATCTCACAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX774298       <-- .....................................GGATCTCACAACA
EX777650       <-- ..................................................
EX769132       <-- ..................................................
FD537575       <-- ..................................................
EV540388       <-- ..................................................
FD960248       <-- ..................................................
EY895591       <-- ..................................................
EY901487       <-- ..................................................
EY902644       <-- ..................................................
EY909607       <-- ..................................................
EX773842       --> GGATCTCTTTACAGACCATGTTTCTGTAAACCAGAGAACATCTCACAACA
EX770040       --> .....................................GGATCTCACAACA
EY916680       --> .....................................GGATCTCACAACA
EY915021       --> ..................................................
FD964151       --> ..................................................
EV535804       --> ..................................................
EV524487       --> ..................................................
EY906474       --> ..................................................
EY899924       --> ..................................................
FD541252       --> ..................................................
EY940202       --> ..................................................
EY913362       --> ..................................................
EX765337       --> ..................................................

               51     -    101
UN19532        --> TAAACTCTCTCTTTCACATTTTTCAGACAAGAAAAAAATGGCTGCAGCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX774298       <-- TAAACTCTCTCTTTCACATTTT-CAGACAAGAAAAAA-TGGCTGCAGCAT
EX777650       <-- ..................................................
EX769132       <-- ..................................................
FD537575       <-- ..................................................
EV540388       <-- ..................................................
FD960248       <-- ..................................................
EY895591       <-- ..................................................
EY901487       <-- ..................................................
EY902644       <-- ..................................................
EY909607       <-- ..................................................
EX773842       --> TAAACTCTCTCTTTCACATTTTCCAGACAAGAAAAAAATGGCTGCAGCAT
EX770040       --> TAAACTCTCTCTTTCACATTTTTCAGACAAGAAAAAAATGGCTGCAGCAT
EY916680       --> TAAACTCTCTCTTTCACATTTTTCAGACAAGAAAAAAATGGCTGCAGCAT
EY915021       --> ..................TTTTTCAGACAAGAAAAAAATGGCTGCAGCAT
FD964151       --> ..................TTTTTTAGACAAGAAAAAAATGGCTGCAGCAT
EV535804       --> .....................cTCAGACAAGAAAAAA-TGGCTGCAGCAT
EV524487       --> ........................AGACAAGAAAAAAATGGCTGCAGCAT
EY906474       --> ......................ggAGACAAGAAAAAA-TGGCTGCAGCAT
EY899924       --> ..........................ggAAGAAAAAAATGGCTGCAGCAT
FD541252       --> ..........................ggAAGAAAAAAATGGCTGCAGCAT
EY940202       --> .........................................CTGCAGCAT
EY913362       --> ..................................................
EX765337       --> ..................................................

               101    -    151
UN19532        --> TCTCTTACACTGCGTGTCCTAAGCTATCTCTATTACAGCCTCCCATGGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX774298       <-- TCTCTTACACTGCGTGTCCTAAGCTATCTCTATTACAGCCTCCCATGGCT  Raphanus raphanistrum subsp. landra
EX777650       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX769132       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD537575       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV540388       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD960248       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY895591       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY901487       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902644       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY909607       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX773842       --> TCTCTTACACTGCGTGTCCTAAGCTATCTCTATTACAGCCTCCCATGGCT  Raphanus raphanistrum subsp. landra
EX770040       --> TCTCTTACACTGCGTGTCCTAAGCTATCTCTATTACAGCCTCCCATGGCT  Raphanus raphanistrum subsp. landra
EY916680       --> TCTCTTACACTGCGTGTCCTAAGCTATCTCTATTACAGCCTCCCATGGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY915021       --> TCTCTTACACTGCGTGTCCTAAGCTATCTCTATTACAGCCTCCCATGGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD964151       --> TCTCTTACACTGCGTGTCCTAAGCTATCTCTATTACAGCCTCCCATGGTT  Raphanus raphanistrum subsp. maritimus
EV535804       --> TCTCTTACACTGCGTGTCCTAAGCTATCTCTATTACAGCCTCCCATGGCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV524487       --> TCTCTTACACTGCGTGTCCTAAGCTATCTCTATTACAGCCTCCCATGGTT  Raphanus raphanistrum subsp. maritimus
EY906474       --> TCTCTTACACTGCGTGTCCTAAGCTATCTCTATTACAGCCTCCCATGGCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY899924       --> TCTCTTACACTGCGTGTCCTAAGCTATCTCTATTACAGCCTCCCATGGTT  Raphanus raphanistrum subsp. maritimus
FD541252       --> TCTCTTACACTGCGTGTCCTAAGCTATCTCTATTACAGCCTCCCATGGCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY940202       --> TCTCTTACACTGCGTGTCCTAAGCTATCTCTATTACAGCCTCCCATGGTT  Raphanus sativus cv Early Scarlet Globe
EY913362       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX765337       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               151    -    201
UN19532        --> GCTCAAATCCGACCATTTAGGACATCACAAAAGGCTTTCGTGGTGACGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX774298       <-- GCTCAAATCCGACCATTTAGGACATCACAAAAGGCTTTCGTGGTGACGAA  Raphanus raphanistrum subsp. landra
EX777650       <-- .......TCCGACCATTTAGGACATCACAAAAGGCTTTCGTGGTGACGAA  Raphanus raphanistrum subsp. landra
EX769132       <-- .......................................GTGGTGACGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD537575       <-- ............................................aACGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV540388       <-- .................................................A  Raphanus raphanistrum subsp. raphanistrum (MS)
FD960248       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY895591       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY901487       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902644       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY909607       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX773842       --> GCTCAAATCCGACCATTTAGGACATCACAAAAGGCTTTCGTGGTGACGAA  Raphanus raphanistrum subsp. landra
EX770040       --> GCTCAAATCCGACCATTTAGGACATCACAAAAGGCTTTCGTGGTGACGAA  Raphanus raphanistrum subsp. landra
EY916680       --> GCTCAAATCCGACCATTTAGAACATCCCAAAAGGCTTTCGTGGTGACAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY915021       --> GCTCAAATCCGACCATTTAGAACATCCCAAAAGGCTTTCGTGGTGACAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD964151       --> GCTCAAATCCGACCATTTAGAACATCCCAAAAGGCTTTCGTGGTGACAAA  Raphanus raphanistrum subsp. maritimus
EV535804       --> GCTCAAATCCGACCATTTAGGACATCACAAAAGGCTTTCGTGGTGACGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV524487       --> GCTCAAATCCGACCATTTAGAACATCCCAAAAGGCTTTCGTGGTGACAAA  Raphanus raphanistrum subsp. maritimus
EY906474       --> GCTCAAATCCGACCATTTAGGACATCACAAAAGGCTTTCGTGGTGACGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY899924       --> GCTCAAATCCGACCATTTAGAACATCCCAAAAGGCTTTCGTGGTGACAAA  Raphanus raphanistrum subsp. maritimus
FD541252       --> GCTCAAATCCGATCATATAGGACATCACAAAAGGCTTTCGTGGTAACGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY940202       --> GCTCAAATCCGACCATTTAGAACATCCCAAAAGGCTTTCGTGGTGACAAA  Raphanus sativus cv Early Scarlet Globe
EY913362       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX765337       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               201    -    251
UN19532        --> CCCTGAGCAAGACAACACACTCCAGGAACAAGACATAGAGACAATCAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX774298       <-- CCCTGAGCAAGACAACACACTCCAAGAACAAGACATAGAGACAATCAAAG  Raphanus raphanistrum subsp. landra
EX777650       <-- CCCTGAGCAAGACAACACACTCCAAGAACAAGACATAGAGACAATCAAAG  Raphanus raphanistrum subsp. landra
EX769132       <-- CC-TGAGCAAGACAACACACTCCAAGAACAAGACATAGAGACAATCAAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD537575       <-- CCCTGAGCAAGACAACACACTCCAGGAACAAGACATAGAGACAATCAAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV540388       <-- CCCTGAGCAAGACAACACACTCCAGGAACAAGACATAGAGACAATCAAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD960248       <-- ........AAGACAACACACTCCAGGAACAAGACATAGAGACAATCAAAG  Raphanus raphanistrum subsp. maritimus
EY895591       <-- ............CAACACACTCCAGGAACAAGACATAGAGACAATCAAAG  Raphanus raphanistrum subsp. maritimus
EY901487       <-- .............AACACACTCCAGGAACAAGACATAGAGACAATCAAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902644       <-- .........................GAACAAGACATAGAGACAATCAAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY909607       <-- .........................GAACAAGACATAGAGACAATCAAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX773842       --> CCCTGAGCAAGACAACACACTCCAAGAACAAGACATAGAGACAATCAAAG  Raphanus raphanistrum subsp. landra
EX770040       --> CCCTGAGCAAGACAACACACTCCAAGAACAAGACATAGAGACAATCAAAG  Raphanus raphanistrum subsp. landra
EY916680       --> CCCTGAGCAAGACAACACACTCCAGGAACAAGACATAGAGACAATCAAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY915021       --> CCCTGAGCAAGACAACACACTCCAGGAACAAGACATAGAGACAATCAAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD964151       --> CCCTGAGCAAGACAACACACTCCAGGAACAAGACATAGAGACAATCAAAG  Raphanus raphanistrum subsp. maritimus
EV535804       --> CCCTGAGCAAGACAACACACTCCAGGAACAAGACATAGAGACAATCAAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV524487       --> CCCTGAGCAAGACAACACACTCCAGGAACAAGACATAGAGACAATCAAAG  Raphanus raphanistrum subsp. maritimus
EY906474       --> CCCTGAGCAAGACAACACACTACAGGAACAAGACATAGAGACAATCAAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY899924       --> CCCTGATCAAGACAACACACTCCAGGAACAAGACATAGAGACAATCAAAG  Raphanus raphanistrum subsp. maritimus
FD541252       --> CCCTGAGCAAGACAACACACTCCAGGAACAAGACATAGAGACAATCAAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY940202       --> CCCTGAGCAAGACAACACACTCCAGGAACAAGACATAGAGACAATCAAAG  Raphanus sativus cv Early Scarlet Globe
EY913362       --> .................gcCTCCAAGAACAAGACATAGAGACAATCAAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX765337       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               251    -    301
UN19532        --> AAGAGCAACCAGCAGAGAAGCAGATGAAGAAGCAGCCAACGCCATTGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX774298       <-- AAGAGCAACCAGCAGAGAAGCAGATGAAGAAGCAGCCCACGCCATTGAGA  Raphanus raphanistrum subsp. landra
EX777650       <-- AAGAGCAACCAGCAGAGAAGCAGATGAAGAAGCAGCCCACGCCATTGAGA  Raphanus raphanistrum subsp. landra
EX769132       <-- AAGAGCAACCAGCAGAGAAGCAGATGAAGAAGCAGCCCACGCCATTGAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD537575       <-- AAGAGCAACCAGCAGAGAAGCAGATGAAGAAGCAGCCAACGCCATTGAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV540388       <-- AAGAGCAACCAGCAGAGAAGCAGATGAATAAGCAGCCAACGCCATTGAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD960248       <-- AAGAGCAACCAGCAGAGAAGCAGATGAAGAAGCAGCCAACGCCATTGAGA  Raphanus raphanistrum subsp. maritimus
EY895591       <-- AAGAGCAACCAGCAGAGAAGCAGATGAAGAAGCAGCCAACGCCATTGAGA  Raphanus raphanistrum subsp. maritimus
EY901487       <-- AAGAGCAACCAGCAGAGAAGCAGATGAAGAAGCAGCCAACGCCATTGAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902644       <-- AAGAGCAACCAGCAGAGAAGCAGATGAATAAGCAGCCAACGCCATTGAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY909607       <-- AAGAGCAACCAGCAGAGAAGCAGATGAAGAAGCAGCCCACGCCATTGAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX773842       --> AAGAGCAACCAGCAGAGAAGCAGATGAAGAAGCAGCCCACGCCATTGAGA  Raphanus raphanistrum subsp. landra
EX770040       --> AAGAGCAACCAGCAGAGAAGCAGATGAAGAAGCAGCCCACGCCATTGAGA  Raphanus raphanistrum subsp. landra
EY916680       --> AAGAGCAACCAGCAGAGAAGCAGATGAAGAAGCAGCCAACGCCATT-AGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY915021       --> AAGAGCAACCAGCAGAGAAGCAGATGAAGAAGCAGCCAACGCCATTGAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD964151       --> AAGAGCAACCAGCAGAGAAGCAGATGAAGAAGCAGCCAACGCCATTGAGA  Raphanus raphanistrum subsp. maritimus
EV535804       --> AAGAGCAACCAGCAGAGAAGCAGATGAATAAGCAGCCAACGCCATTGAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV524487       --> AAGAGCAACCAGCAGAGAAGCAGATGAAGAAGCAGCCAACGCCATTGAGA  Raphanus raphanistrum subsp. maritimus
EY906474       --> AAGAGCAACCAGCAGAGAAGCAGATGAATAAGCAGCCAACGCCATTGAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY899924       --> AAGAGCAACCAGCAGAGAAGCAGATGAAGAAGCAGCCAACGCCATTGAGA  Raphanus raphanistrum subsp. maritimus
FD541252       --> AAGAGCAACCAGCAGAGAAGCAGATGAAGAAGCAGCCAACGCCATTGAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY940202       --> AAGAGCAACCAGCAGAGAAGCAGATGAAGAAGCAGCCAACGCCATTGAGA  Raphanus sativus cv Early Scarlet Globe
EY913362       --> AAGAGCAACCAGCAGAGAAGCAGATGAAGAAGCAGCCCACGCCATTGAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX765337       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               301    -    351
UN19532        --> CCAGTGGAGAAACAGTCTAATGTGAAGAGCACAGGCTTGCCAAGAGAGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX774298       <-- CCAGTGGAGAAACAGTCTAATGTGAAGAGCACAGGCTTGCCAAGAGAGTT  Raphanus raphanistrum subsp. landra
EX777650       <-- CCAGTGGAGAAACAGTCTAATGTGAAGAGCACAGGCTTGCCAAGAGAGTT  Raphanus raphanistrum subsp. landra
EX769132       <-- CCAGTGGAGAAACAGTCTAATGTGAAGAGCACAGGCTTGCCAAGAGAGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD537575       <-- CCAGTGGAGAAACAGTCTAATGTGAAGAGCACAGGCTTGCCAAGAGAGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV540388       <-- CCAGTGGAGAAACAGTCTAATGTGAAGAGCACAGGCTTGCCAAGAGAGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD960248       <-- CCAGTGGAGAAACAGTCAAATGTGAAGAGCACAGGCTTGCCAAGAGAGTT  Raphanus raphanistrum subsp. maritimus
EY895591       <-- CCAGTGGAGAAACAGTCAAATGTGAAGAGCACAGGCTTGCCAAGAGAGTT  Raphanus raphanistrum subsp. maritimus
EY901487       <-- CCAGTGGAGAAACAGTTTAATGCGAATAGCACAGGCTTGCCAAGAGAGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902644       <-- CCAGTGGAGAAACAGTTTAATGTGAAGAGCACAGGCTTGCCAAGAGAGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY909607       <-- CCAGTGGAGAAACAGTCTAATGTGAAGAGCACAGGCTTGCCAAGA--GTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX773842       --> CCAGTGGAGAAACAGTCTAATGTGAAGAGCACAGGCTTGCCAAGAGAGTT  Raphanus raphanistrum subsp. landra
EX770040       --> CCAGTGGAGAAACAGTCTAATGTGAAGAGCACAGGCTTGCCAAGAGAGTT  Raphanus raphanistrum subsp. landra
EY916680       --> CCAGTGGAGAAACAGTCAAATGTGAAGAGCACAGGCT.............  Raphanus raphanistrum subsp. raphanistrum (NY)
EY915021       --> CCAGTGGAGAAACAGTCAAATGTGAAGAGCACAGGCTTGCCAAGAGAGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD964151       --> CCAGTGGAGAAACAGTCAAATGTGAAGAGCACAGGCTTGCCAAGAGAGTT  Raphanus raphanistrum subsp. maritimus
EV535804       --> CCAGTGGAGAAACAGTCTAATGTGAAGAGCACAGGCTTGCCAAGAGAGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV524487       --> CCAGTGGAGAAACAGTCAAATGTGAAGAGCACAGGCTTGCCAAGAGAGTT  Raphanus raphanistrum subsp. maritimus
EY906474       --> CCAGTGGAGAAACAGTCTAATGTGAAGAGCACAGGCTTGCCAAGAGAGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY899924       --> CCAGTGGAGAAACAGTCAAATGTGAAGAGCACAGGCTTGCCAAGAGAGTT  Raphanus raphanistrum subsp. maritimus
FD541252       --> CCAGTGGAGAAACAGTCTAATGTGAAGAGCACAGGCTTGCCAAGAGAGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY940202       --> CCAGTGGAGAAACAGTCTAATGTGAAGAGCACAGGCTTGCCAAGATAGTT  Raphanus sativus cv Early Scarlet Globe
EY913362       --> CCAGTGGAGAAACAGTCTAATGTGAAGAGCACAGGCTTGCCAAGAG--TT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX765337       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               351    -    401
UN19532        --> TGGTGGTGAGTGGCTAAGCAGTGTGACACGCCACGTCAGGATATACGCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX774298       <-- TGGTGGTGAGTGGCTAAGCAGTGTGACACGCCACGTCAGGATATACGCTG
EX777650       <-- TGGTGGTGAGTGGCTAAGCAGTGTGACACGCCACGTCAGGATATACGCTG
EX769132       <-- TGGTGGTGAGTGGCTAAGCAGTGTGACACGCCACGTCAGGATATACGCTG
FD537575       <-- TGGTGGTGAGTGGCTAAGCAGTGTGACGCGCCACGTCAGGATATACGCTG
EV540388       <-- TGGTGGTGAGTGGCTAAGCAGTGTGACACGCCACGTCAGGATATACGCTG
FD960248       <-- TGGTGGTGAGTGGCTAAGCAGTGTGACACGCCACGTCAGGATATACGCTG
EY895591       <-- TGGTGGTGAGTGGCTAAGCAGTGTGACACGCCACGTCAGGATATACGCTG
EY901487       <-- TGGTGGTGAGTGGCTAAGCAGTGTGACACGCCACGTCAGGATATACGCTG
EY902644       <-- TGGTGGTGAGTGGTTAAGCAGTGTGACACGCCACGTCAGGATATACGCTG
EY909607       <-- TGGTGGTGAGTGGCTAAGCAGTGTGACACGCCACGTCAGGATATACGCTG
EX773842       --> TGGTGGTGAGTGGCTAAGCAGTGTGACACGCCACGTCAGGATATACGCTG
EX770040       --> TGGTGGTGAGTGGCTAAGCAGTGTGACACGCCACGTCAGGATATACGCTG
EY916680       --> ..................................................
EY915021       --> TGGTGGTGAGTGGCTAAGCAGTGTGACACGCCACGTCAGGATATACGCTG
FD964151       --> TGGTGGTGAGTGGCTAAGCAGTGTGACACGCCACGTCAGGATATACGCTG
EV535804       --> TGGTGGTGAGTGGCTAAGCAGTGTGACACGCCACGTCAGGATATACGCTG
EV524487       --> TGGTGGTGAGTGGCTAAGCAGTGTGACACGCCACGTCAGGATATATGCTG
EY906474       --> TGGTGGTGAGTGGCTAAGCAGTGTGACACGCCACGTCAGGATATACGCTG
EY899924       --> TGGTGGTGAGTGGCTAAGCAGTGTGACACGCCACGTCAGGATATACGCTG
FD541252       --> TGGTGGTGAGTGGCTAAGCAGTGTGACGCGCCACGTCAGGATATACGCTG
EY940202       --> TGGTGGTGAGTGGCTAAGCAGTGTGACACGCCACGTCAGGATATACGCTG
EY913362       --> TGGTGGTGAGTGGCTAAGCAGTGTGACACGCCACGTCAGGATATACGCTG
EX765337       --> ..................................................

               401    -    451
UN19532        --> CTTATATAGATCCTGAGACTTGTGAGTTTGACCAGACGCAGTTGGATAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX774298       <-- CTTATATAGATCCTGAGACTTGTGAGTTTGACCAGACGCAGTTGGATAAA  Raphanus raphanistrum subsp. landra
EX777650       <-- CTTATATAGATCCTGAGACTTGTGAGTTTGACCAGACGCAGTTGGATAAA  Raphanus raphanistrum subsp. landra
EX769132       <-- CTTATATAGATCCTGAGACTTGTGAGTTTGACCAGACGCAGTTGGATAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD537575       <-- CTTATATAGATCCTGAGACTTGTGAGTTTGACCAGACGCAGTTGGATAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV540388       <-- CTTATATAGATCCTGAGACTTGTGAGTTTGACCAGACGCAGTTGGATAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD960248       <-- CTTATATAGATCCCGAGACTTGTGAGTTTGACCAGACGCAGTTGGATAAA  Raphanus raphanistrum subsp. maritimus
EY895591       <-- CTTATATAGATCCCGAGACTTGTGAGTTTGACCAGACGCAGTTGGATAAA  Raphanus raphanistrum subsp. maritimus
EY901487       <-- CTTATATAGATCCTGAGACTTGTGAGTTTGACCAGACGCAGTTGGATAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902644       <-- CTTATATAGATCCTGAGACTTGTGAGTTTGACCAGACGCAGTTGGATAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY909607       <-- CTTATATAGATCCTGAGACTTGTGAGTTTGACCAGACGCAGTTGGATAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX773842       --> CTTATATAGATCCTGAGACTTGTGAGTTTGACCAGACGCAGTTGGATAAA  Raphanus raphanistrum subsp. landra
EX770040       --> CTTATATAGATCCTGAGACTTGTGAGTTTGACCAGACGCAGTTGGATAAA  Raphanus raphanistrum subsp. landra
EY916680       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY915021       --> CTTATATAGATCCTGAGACTTGTGAGTTTGACCAGACGCAGTTGGATAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD964151       --> CTTATATAGATCCCGAGACTTGTGAGTTTGACCAGACGCAGTTGGATAAA  Raphanus raphanistrum subsp. maritimus
EV535804       --> CTTATATAGATCCTGAGACTTGTGAGTTTGACCAGACGCAGTTGGATAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV524487       --> CTTATATAGATCCCGAGACTTGTGAGTTTGACCAGACGCAGTTGGATAAA  Raphanus raphanistrum subsp. maritimus
EY906474       --> CTTATATAGATCCTGAGACTTGTGAGTTTGACCAGACGCAGTTGGATAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY899924       --> CTTATATAGATCCCGAGACTTGTGAGTTTGACCAGACGCAGTTGGATAAA  Raphanus raphanistrum subsp. maritimus
FD541252       --> CTTATATAGATCCTGAGACTTGTGAGTTTGACCAGACGCAGTTGGATAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY940202       --> CTTATATAGATCCTGAGACTTGTGAGTTTGACCAGACGCAGTTGGATAAA  Raphanus sativus cv Early Scarlet Globe
EY913362       --> CTTATATAGATCCTGAGACTTGTGAGTTTGACCAGACGCAGTTGGATAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX765337       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               451    -    501
UN19532        --> CTCACTTTGATTCTTGATCCAACTGAAGAGTTTGTGTGGGAAGATGAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX774298       <-- CTCACTTTGATTCTTGATCCAACTGAAGAGTTTGTGTGGGAAGATGAAAG
EX777650       <-- CTCACTTTGATTCTTGATCCAACTGAAGAGTTTGTGTGGGAAGATGAAAG
EX769132       <-- CTCACTTTGATTCTTGATCCAACTGAAGAGTTTGTGTGGGAAGATGAAAG
FD537575       <-- CTCACTTTGATTCTTGATCCAACTGAAGAGTTTGTGTGGGAAGATGAAAG
EV540388       <-- CTCACTTTGATTCTTGATCCAACTGAAGAGTTTGTGTGGGAAGATGAAAG
FD960248       <-- CTCACTTTGATTCTTGATCCAACTGAAGAGTTTGTGTGGGAAGATGAAAG
EY895591       <-- CTCACTTTGATTCTTGATCCAACTGAAGAGTTTGTGTGGGAAGATGAAAG
EY901487       <-- CTCACTTTGATTCTTGATCCAACTGAAGAGTTTGTGTGGGAAGATGAAAG
EY902644       <-- CTCACTTTGATTTTTGATCCAACTGAAGAGTTTGTGTGGGAAGATGAAAG
EY909607       <-- CTCACTTTGATTCTTGATCCAACTGAAGAGTTTGTGTGGGAAGATGAAAG
EX773842       --> CTCACTTTGATTCTTGATCCAACTGAAGAGTTTGTGTGGGAAGATGAAAG
EX770040       --> CTCACTTTGATTCTTGATCCAACTGAAGAGTTTGTGTGGGAAGATGAAAG
EY916680       --> ..................................................
EY915021       --> CTCACTTTGATTCTTGATCCAACTGAAGAGTTTGTGTGGGAAGATGAAAG
FD964151       --> CTCACTTTGATTCTTGATCCAACTGAAGAGTTTGTGTGGGAAGATGAAAG
EV535804       --> CTCACTTTGATTCTTGATCCAACTGAAGAGTTTGTGTGGGAAGATGAAAG
EV524487       --> CTCACTTTGATTCTTGATCCAACTGAAGAGTTTGTGTGGGAAGATGAAAG
EY906474       --> CTCACTTTGATTCTTGATCCAACTGAAGAGTTTGTGTGGGAAGATGAAAG
EY899924       --> CTCACTTTGATTCTTGATCCAACTGAAGAGTTTGTGTGGGAAGATGAAAG
FD541252       --> CTCACTTTGATTCTTGATCCAACTGAAGAGTTTGTGTGGGAAGATGAAAG
EY940202       --> CTCACTTTGATTCTTGATCCAACTGAAGAGTTTGTGTGGGAAGATGAAAG
EY913362       --> CTCACTTTGATTCTTGATCCAACTGAAGAGTTTGTGTGGGAAGATGAAAG
EX765337       --> ..................................................

               501    -    551
UN19532        --> CTGTAACAAGGTTTATTCTTATTTCCAAGAACTTGTCGATCACTATGAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX774298       <-- CTGTAACAAGGTTTATTCTTATTTCCAAGAACTTGTCTATCACTATGAGG
EX777650       <-- CTGTAACAAGGTTTATTCTTATTTCCAAGAACTTGTCGATCACTATGAGG
EX769132       <-- CTGTAACAAGGTTTATTTTTATTTCCAAGAACTTGTCGATCACTATGAGG
FD537575       <-- CTGTAACAAGGTTTATTCTTATTTCCAAGAACTTGTCGATCACTATGAGG
EV540388       <-- CTGTAACAAGGTTTATTCTTATTTCCAAGAACTTGTCGATCACTATGAGG
FD960248       <-- CTGCAACAAGGTTTATTTTTATTTCCAAGAACTTGTCGATCACTATGAGG
EY895591       <-- CTGTAACAAGGTTTATTTTTATTTCCAAGAACTTGTCGATCACTATGAGG
EY901487       <-- CTGTAACAAGGTTTATTCTTATTTCCAAGAACTTGTCGATCACTATGAGG
EY902644       <-- CTGTAACAAGGTTTATTTTTATTTCCAAGAACTTGTCGATCACTATGAGG
EY909607       <-- CTGTAACAAGGTTTATTCTTATTTCCAAGAACTTGTCGATCACTATGAGG
EX773842       --> CTGTAACAAGGTTTATTCTTATTTCCAAGAACTTGTCGATCACTATGAGG
EX770040       --> CTGTAACAAGGTTTATTCTTATTTCCAAGAACTTGTCTATCACTATGAGG
EY916680       --> ..................................................
EY915021       --> CTGTAACAAGGTTTATTCTTATTTCCAAGAACTTGTCGATCACTATGAGG
FD964151       --> CTGCAACAAGGTTTATTCTTATTTCCAAGAACTTGTCGATCACTATGAGG
EV535804       --> CTGTAACAAGGTTTATTCTTATTTCCAAGAACTTGTCGATCACTATGAGG
EV524487       --> CTGTAACAAGGTTTATTCTTATTTCCAAGAACTTGTCGATCACTATGAGG
EY906474       --> CTGTAACAAGGTTTATTCTTATTTCCAAGAACTTGTCGATCACTATGAGG
EY899924       --> CTGTAACAAGGTTTATTCTTATTTCCAAGAACTTGTCGATCACTATGAGG
FD541252       --> CTGTAACAAGGTTTATTCTTATTTCCAAGAACTTGTCGATCACTATGAGG
EY940202       --> CTGTAACAAGGTTTATTCTTATTTCCAAGAACTTGTCGATCACTATGAGG
EY913362       --> CTGTAACAAGGTTTATTCTTATTTCCAAGAACTTGTCGATCACTATGAGG
EX765337       --> ....................................CGATCACTATGAGG

               551    -    601
UN19532        --> GAGCACCATT-GACAGAGTATACACTAAGGTTGATAGGATCAGACGTAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX774298       <-- GAGCACCATT-GACAGAGTATACACTAAGGTTGATAGGATCAGACGTAGA
EX777650       <-- GAGCACCATT-GACAGAGTATACACTAAGGTTGATAGGATCAGACGTAGA
EX769132       <-- GAGCACCATT-GACAGAGTATACACTAAGGTTGATAGGATCAGACGTAGA
FD537575       <-- GAGCACCATT-GACAGAGTATACACTAAGGTTGATAGGATCAGACGTAGA
EV540388       <-- GAGCACCATT-GACAGAGTATACACTAAGGTTGATAGGATCAGACGTAGA
FD960248       <-- GAGCACCATT-GACAGAGTATACACTAAGGTTGATAGGATCAGACGTAGA
EY895591       <-- GAGCACCATT-GACAGAGTATACACTAAGGTTGATAGGATCAGACGTAGA
EY901487       <-- GAGCACCATT-GACAGAGTATACACTAAGGTTGATAGGATCAGACGTAGA
EY902644       <-- GAGCACCATT-GACAGAGTATACACTAAGGTTGATAGGATCAGACGTAGA
EY909607       <-- GAGCACCATT-GACAGAGTATACACTAAGGTTGATAGGATCAGACGTAGA
EX773842       --> GAGCACCATT-GACAGAGTATACACTAAGGTTGATAGGATCAGACGTAGA
EX770040       --> GAGCACCATT-GACAGAGTATACACTAAGGTTGATAGGATCAGACGTAGA
EY916680       --> ..................................................
EY915021       --> GAGCACCATT-GACAGAGTATACACTAAGGTTGATAGGATCAGACGTAGA
FD964151       --> GAGCACCATT-GACAGAGTATACACTAAGGTTGATAGGATCAGACGTAGA
EV535804       --> GAGCACCATT-GACAGAGTATACACTAAGGTTGATAGGATCAGACGTAGA
EV524487       --> GAGCACCATT-GACAGAGTATACACTAAGGTTGATAGGATCAGACGTAGA
EY906474       --> GAGCACCATT-GACAGAGTATACACTAAGGTTGATAGGATCAGACGTAGA
EY899924       --> GAGCACCATT-GACAGAGTATACACTAAGGTTGATAGGATCAGACGTAGA
FD541252       --> GAGCACCATT-GACAGAGTATACACTAAGGTTGATAGGATCAGACGTAGA
EY940202       --> GAGCACCATT-GACAGAGTATACACTAAGGTTGATAGGATCAGACGTGGA
EY913362       --> GAGCACCATT-GACAGAGTATACACTAAGGTTGATAGGATCAGACGTAGA
EX765337       --> GAGCACCATTTGACAGAGTATACACTAAGGTTGATAGGATCAGACGTAGA

               601    -    651
UN19532        --> GCATTACATAAGGAAGATGTTGTTTGATGGAGAGATACAATACAATATGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX774298       <-- GCATTACATAAGGAAGATGTTGTTTGATGGAGAGATACAATACAATATGG
EX777650       <-- GCATTACATAAGGAAGATGTTGTTTGATGGAGAGATACAATACAATATGG
EX769132       <-- GCATTACATAAGGAAGATGTTGTTTGATGGAGAGATACAATACAATATGG
FD537575       <-- GCATTACATAAGGAAGATGTTGTTTGATGGAGAGATACAATACAATATGG
EV540388       <-- ACACTACATAAGGAAGATGTTGTTTGATGGAGAGATACAATACAATATGG
FD960248       <-- GCATTACATAAGGAAGATGTTGTTTGATGGAGAGATACAATACAATATGG
EY895591       <-- GCATTACATAAGGAAGATGTTGTTTGATGGAGAGATACAATACAATATGG
EY901487       <-- GCATTACATAAGGAAGATGTTGTTTGATGGAGAGATACAATACAATATGG
EY902644       <-- ACACTACATAAGGAAGATGTTGTTTGATGGAGAGATACAATACAATATGG
EY909607       <-- GCATTACATAAGGAAGATGTTGTTTGATGGAGAGATACAATACAATATGG
EX773842       --> GCATTACATAAGGAAGATGTTGTTTGATGGAGAGATACAATACAATATGG
EX770040       --> GCATTACATAAGGAAGATGTTGTTTGATGGAGAGATACAATACAATATGG
EY916680       --> ..................................................
EY915021       --> GCATTACATAAGGAAGATGTTGTCTGATGGAGAGATACAATACAATATGG
FD964151       --> GCATTACATAAGGAAGATGTTGTTTGATGGAGAGATACAATACAATATGG
EV535804       --> ACACTACATAAGGAAGATGTTGTTTGATGGAGAGATACAATACAATATGG
EV524487       --> GCATTACATAAGGAAGATGTTGTTTGATGGAGAGATACAATACAATATGG
EY906474       --> ACACTACATAAGGAAGATGTTGTTTGATGGAGAGATACAATACAATATGG
EY899924       --> GCATTACATAAGGAAGATGTTGTTTGATGGAGAGATACAATACAATATGG
FD541252       --> GCATTACATAAGGAAGATGTTGTTTGATGGAGAGATACAATACAATATGG
EY940202       --> GCATTACATAAGGAAGATGTTGTTTGATGGAGAGATACAATACAATATGG
EY913362       --> GCATTACATAAGGAAGATGTTGTTTGATGGAGAGATACAATACAATATGG
EX765337       --> GCATTACATAAGGAAGATGTTGTTTGATGGAGAGATACAATACAATATGG

               651    -    701
UN19532        --> ATGCAAGAGTTCTTAATTT-CAGTATGGGAAAGCCTCGTGTTCAGTTCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX774298       <-- ATGCAAGAGTTCTTAATTT-CAGTATGGGAAAGCCTCGTGTTCAGTTCAA
EX777650       <-- ACGCAAGAGTTCTTAATTT-CAGTATGGGAAAGCCTCGTGTTCAGTTCAA
EX769132       <-- ATGCAAGAGTTTTTAATTT-CAGTATGGGAAAGCCTCGTGTTCAGTTCAA
FD537575       <-- ATGCAAGAGTTCTTAATTT-CAGTATGGGAAAGCCTCGTGTTCAGTTCAA
EV540388       <-- ATGCAAGAGTTCTTAATTT-CAGTATGGGAAAGCCTCGTGTTCAGTTCAA
FD960248       <-- ATGCAAGAGTTTTTAATTT-CAGTATGGGAAAGCCTCGTGTTCAGTTCAA
EY895591       <-- ATGCAAGAGTTTTTAATTT-CAGTATGGGAAAGCCTCGTGTTCAGTTCAA
EY901487       <-- ATGCAATAGTTTTTAATTT-CAGTATGGGAAAGCCTCGTGTTCAGTTCAA
EY902644       <-- ATGCAAGAGTTTTTAATTT-CAGTATGGGAAAGCCTCGTGTTCAGTTCAA
EY909607       <-- ATGCAAGAGTTTTTAATTT-CAGTATGGGAAAGCCTCGTGTTCAGTTCAA
EX773842       --> ACGCAAGAGTTCTTAATTT-CAGTATGGGAAAGCCTCGTGTTCAGTTCAA
EX770040       --> ATGCAAGAGTTCTTAATTT-CAGTATGGGAAAGCCTCGTGTTCAGTTCAA
EY916680       --> ..................................................
EY915021       --> ATGCAAGAGTTCTTAATTT-CAGTATGGGAAAGCCTCGTGTTCAGTTCAA
FD964151       --> ATGCAAGAGTTCTTAATTT-CAGTATGGGAAAGCCTCGTGTTCAGTTCAA
EV535804       --> ATGCAAGAGTTCTTAATTT-CAGTATGGGAAAGCCTCGTGTTCAGTTCAA
EV524487       --> ATGCAAGAGTTCTTAATTTTCAGTATGGGAAAGCCTCGTGTTCAGTTCAA
EY906474       --> ATGCAAGAGTTCTTAATTT-CAGTATGGGAAAGCCTCGTGTTCAGTTCAA
EY899924       --> ATGCAAGAGTTCTTAATTT-CAGTATGGGAAAGCCTCGTGTTCAGTTCAA
FD541252       --> ATGCAAGAGTTCTTAATTT-CAGTATGGGAAAGCCTCGTGTTCAGTTCAA
EY940202       --> ATGCAAGAGTTCTTAATTT-CAGTATGGGAAAGCCTCGTGTTCAGTTCAA
EY913362       --> ATGCAAGAGTTCTTAATTT-CAGTATGGGAAAGCCTCGTGTTCAGTTCAA
EX765337       --> ATGCAAGAGTTCTTAATTT-CAGTATGGGAAAGCCTCGTGTTCAGTTCA-

               701    -    751
UN19532        --> CACCAGCAACATTGAAGGTGG-TGGAGATGACCAGCCTCAAGAAGATGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX774298       <-- CACCAGCAACATTGAAGGTGG-TGGAGATGACCAGCCTCAAGAAGATGCA
EX777650       <-- CACCAGCAACATTGAAGGTGG-TGGAGATGGCCAGCCTCAAGAAGATGCA
EX769132       <-- CACCAGCAACATTGAAGGTGG-TGGAGATGACCAGCCTCAAGAAGATGCA
FD537575       <-- CACCAGCAACATTGAAGGTGG-TGGAGATGACCAGCCTCAAGAAGATGCA
EV540388       <-- CACCAGCAACATTGAAGGTGG-TGGAGATGACCAGCCTCAAGAAGATGCA
FD960248       <-- CACCAGCAACATTGAAGGTGG-TGGAGATGACCAGCCTCAAGAAGATGCA
EY895591       <-- CACCAGCAACATTGAAGGTGG-GGGAGATGACCAGCCTCAAGAAGATGCA
EY901487       <-- CACCAGCAACATTGAAGGTGG-TGGAGATGACCAGCCTCAAGAAGATGCA
EY902644       <-- CACCAGCAACATTGAAGGTGG-TGGAGATGACCAGCCTCAAGAAGATGCA
EY909607       <-- CACCAGCAACATTGAAGGTGG-TGGAGATGACCAGCCTCAAGAAGATGCA
EX773842       --> CACCAGCAACATTGA...................................
EX770040       --> CACCAGCAACATTGAAG-TGG-TGGAGATGACCAGCCTCAAGAAGATGCA
EY916680       --> ..................................................
EY915021       --> CACCAGCAACATTGAAGGTGG-TGG.........................
FD964151       --> CACCAGCAACATTGAAGGTGG-TGGAGATGACCAGCCTCAAGAAGATGCA
EV535804       --> CACCAGCAACATTGAAAGTGG-TGGAGATGACCAGCCTCAAGAAGATGCA
EV524487       --> CACCAGCAACATTGAAAGTGGGTGGAGATGACCAGCCTCAAGAAGATGCA
EY906474       --> CACCAGCAACATTGAAGGTGG-TGGAGATGACCAGCCTCAAGAAGATGCA
EY899924       --> CACCAGCAACATTGAAG-TGG-CGGAGATGACCAGCCTCAAGAAGATGCA
FD541252       --> CACCAGCAACATTGAAAGTGG-TGGAGATGACCAGCCTCAAGAAGATGCA
EY940202       --> CACCAGCAACATTGAAG-TGG-TGGAGATGACCAGCCTCAAGA-GATGCA
EY913362       --> CACCAGCAACATTGAAGGTGG-TGGAGATGACCAGCCTCAAGAAGATGCA
EX765337       --> CACCAGCAACA.......................................

               751    -    801
UN19532        --> TAATGAAAACAGCTCTATACCAAAGT--TGTGGACAAACGAGATCAAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX774298       <-- TAATGAAAACAGCTCTATACCAAAGT--TGTGTACAAACGAGATCAAAAA  Raphanus raphanistrum subsp. landra
EX777650       <-- TAATGAAAACAGCTCTATACCAAAGT--TGTGGACAAACGAGATCAAAAA  Raphanus raphanistrum subsp. landra
EX769132       <-- TAATGAAAACAGCTCTATACCAAAGT--TGTGGACAAACGAGATCAAAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD537575       <-- TAATGAAAACAGCTCTATACCAAAGTGTTGTGGACAAACGAGATCAAAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV540388       <-- TAATGAAAACCGCTCTATACCAAAGTGTTGTGGACAAACGAGATCAAAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD960248       <-- TAATGAAAACAGCTCTATACCAAAGT--TGTGGACAAACGAGATCAAAAA  Raphanus raphanistrum subsp. maritimus
EY895591       <-- TAATGAAAACAGCTTTATACCAAAGT--TGTGGACAAACGAGATCAAAAA  Raphanus raphanistrum subsp. maritimus
EY901487       <-- TAATGAAAACAGCTCTATACCAAAGTGTTGTGGACAAACGAGATCAAAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902644       <-- TAATGAAAACCGCTTTATACCAAAGTGTTGTGGACAAACGAGATCAAAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY909607       <-- TAATGAAAACAGCTCTATACCAAAGT--TGTGGACAAACGAGATCAAAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX773842       --> ..................................................  Raphanus raphanistrum subsp. landra
EX770040       --> TAATGAAAACAGCTCTATACCAAAGT--TGTGTACAAACGAGATCAAAAA  Raphanus raphanistrum subsp. landra
EY916680       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY915021       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD964151       --> TAATGAAA-CAGCTCTATACCAAAGT--TGTGGACAA-CGAGATCAAAAA  Raphanus raphanistrum subsp. maritimus
EV535804       --> TAATGAAAACCGCTCTATACCAAAGTGTTGTGGACAAACGAGATCAAAA.  Raphanus raphanistrum subsp. raphanistrum (MS)
EV524487       --> TAATGAAA-CAGCTCTATACCAAAGT--TGTGGACAAACGAGATCAAAA-  Raphanus raphanistrum subsp. maritimus
EY906474       --> TAATGAAAACCGCTCTATACCAAAGTGTTGTGGACAAACGAGATCAAA-G  Raphanus raphanistrum subsp. raphanistrum (MS)
EY899924       --> TAATGAAAACAGCTCTATACCAAAGT--TGTGGACAAACGAGATCAAAAA  Raphanus raphanistrum subsp. maritimus
FD541252       --> TAATGAAAACAGCTCTATACCAAAGTGTTGTGGACAAACGAGATCAAAA-  Raphanus raphanistrum subsp. raphanistrum (MS)
EY940202       --> TAATGAAA-CAGCTCTATACCAAAGT--TGTGGACA..............  Raphanus sativus cv Early Scarlet Globe
EY913362       --> TAATGAAAACAGCTCTATACCAAAGT--TGTGGACAAACGAGATCAAAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX765337       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               801    -    851
UN19532        --> TATATGACGTTTTTTATATGGGTTGATAAAATACTCTTTTTTTT--TTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX774298       <-- TATATGACGTTTTTTATATGGGATGATAAAATACTCTTTTTTTT--Tc..
EX777650       <-- TATATGACGTTTTTTATATGGGATGATAAAATACTCTTTTTTTTCTTTTT
EX769132       <-- TATATGACGTTTTTTATATGGGTTGATAAAATACTCTTTTTTTT--TTTT
FD537575       <-- TATATGACGTTTTTTATATGGGTTGATAAAATACTCTTTTTTTT--TTTc
EV540388       <-- TATATGACGTTTTTTATATGGGTTGATAAAATACTCTTTTTTTT--TTT-
FD960248       <-- TATATGACGTTTTTTATATGGGTTGATAAAATACTCTTTTTTTT--TTTT
EY895591       <-- TATATGACGTTTTTTATATGGGTTGATAAAATACTCTTTTTTTT--TTT-
EY901487       <-- ..................................................
EY902644       <-- TATATGACGTTTTTTATATGGGTTGATAAAATACTTTTTTTTTT--TTT.
EY909607       <-- TATATGACGTTTTTTATATGGGTTGATAAAATACTCTTTTTTTT--TTT-
EX773842       --> ..................................................
EX770040       --> ..................................................
EY916680       --> ..................................................
EY915021       --> ..................................................
FD964151       --> TATATGACGTTTTTT-TATGGGTT..........................
EV535804       --> ..................................................
EV524487       --> TATATGACGTTTTTTATATGGGTTGATAAA-TACTC..............
EY906474       --> TATATGACGTTTTTTATATGGGTTGAT.......................
EY899924       --> TATATGACGTTTTTTATATGGGTTGATAAAATA.................
FD541252       --> TATATGACGTTTTTTATATGGGTTGA........................
EY940202       --> ..................................................
EY913362       --> TATATGACGTTTTTTATATGGGTTGATAAAATACTCTTTTTTTT--TTT-
EX765337       --> ..................................................

               851    -    901
UN19532        --> --CCATTCTCTC-GTCTTATAAGTAGAATATAAAGCATGTCCATGATTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX774298       <-- ..................................................
EX777650       <-- -CCCATTCTCTCAGTCTTATA---AGAATATAAAGCATGTCCATGATTTT
EX769132       <-- TTCCATTCTCTC-GTCTTATAAGTAGAATATAAAGCATGTCCATGATTTT
FD537575       <-- c.................................................
EV540388       <-- --CCATTTTTTC-GTCTTATAAGTAGAATATAAAGCATGTCCATGATTTT
FD960248       <-- TTCCATTCTCTC-GTCTTATAAGTAGAATATAAAGCATGTCCATGATTTT
EY895591       <-- --CCATTCTCTC-GTCTTATAAGTAGAATATAAAGCATGTCCATGATTTT
EY901487       <-- ..................................................
EY902644       <-- ..................................................
EY909607       <-- --CCATTCTCTC-GTCTTATAAGTAGAATATAAAGCATGTCCATGATTTT
EX773842       --> ..................................................
EX770040       --> ..................................................
EY916680       --> ..................................................
EY915021       --> ..................................................
FD964151       --> ..................................................
EV535804       --> ..................................................
EV524487       --> ..................................................
EY906474       --> ..................................................
EY899924       --> ..................................................
FD541252       --> ..................................................
EY940202       --> ..................................................
EY913362       --> --CCATTCTCTC-GTCTTATAAGTAGAATATAAAGCATGTCCATGATTTT
EX765337       --> ..................................................

               901    -    951
UN19532        --> GCTGACACTATAGTTTAAGAGTTCCACAAGTAGTTGAGTTTGTGCCTTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX774298       <-- ..................................................
EX777650       <-- GCTGACACTATAGTTTAAGAGTTCCACAAGTAGTTGAGTTTGTGCCTT..
EX769132       <-- GCTGACACTATAGTTTAAGAGTTCCACAAGTAGTTGAGTTTGTGCCTTAA
FD537575       <-- ..................................................
EV540388       <-- GCTGACACTATAGTTTAAGAGTTCCACAAGTAGTTGAGTTgagtttgtgc
FD960248       <-- GCTGACAC..........................................
EY895591       <-- GCTGACACTATAGTTTAAGAGTTCC.........................
EY901487       <-- ..................................................
EY902644       <-- ..................................................
EY909607       <-- GCTGACACTATAGTTTAAGAGTTCCACAAGTAGTTGAGTTTGTGCCTTAA
EX773842       --> ..................................................
EX770040       --> ..................................................
EY916680       --> ..................................................
EY915021       --> ..................................................
FD964151       --> ..................................................
EV535804       --> ..................................................
EV524487       --> ..................................................
EY906474       --> ..................................................
EY899924       --> ..................................................
FD541252       --> ..................................................
EY940202       --> ..................................................
EY913362       --> GCTGACACTATAGTTTAAGAGTTCCACAAGTAGTTGAGTTTGTGCCTTAA
EX765337       --> ..................................................

               951    -   1001
UN19532        --> TAAACGTTTCAACGCCTAAAAAAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~
EX774298       <-- ..........................
EX777650       <-- ..........................
EX769132       <-- TAAACGTTTCAACGCCTAc.......
FD537575       <-- ..........................
EV540388       <-- ctt.......................
FD960248       <-- ..........................
EY895591       <-- ..........................
EY901487       <-- ..........................
EY902644       <-- ..........................
EY909607       <-- TAAACGTTTCAACGCCT.........
EX773842       --> ..........................
EX770040       --> ..........................
EY916680       --> ..........................
EY915021       --> ..........................
FD964151       --> ..........................
EV535804       --> ..........................
EV524487       --> ..........................
EY906474       --> ..........................
EY899924       --> ..........................
FD541252       --> ..........................
EY940202       --> ..........................
EY913362       --> TAA-CGTTTCAACGCCTAAAAAAAAA
EX765337       --> ..........................