1      -     51
UN19556        --> GGCTCGCCCCCATAAAACCCTAGAAAGAGAGCTTCTCCATTCCCCAAA-C
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721902       <-- GGCTCGCCCCCATAAAACCCTAGAAAGAGAGCTTCTCCATTCCCCAAA-C
EV540180       <-- ...ggGCCCCCATAAAACCCTAGAAAGAGAGCTTCTCCATTCCCCAAA-C
EY929072       <-- ...ggGCCCCCATAAAACCCTAGAAAGAGAGCTTCTCCATTCCCCAAAAC
FD539304       <-- ...ggGCCCCCATAAAACCCTAGAAAGAGAGCTTCTCCATTCCCCAAA-C
EX776733       <-- .........ggATAAAACCCTAGAAAGAGAGCTTCTCCATTCCCCAAA-C
EY901491       <-- ..................................................
EY942245       <-- ..................................................
EX906954       <-- ..................................................
FD935916       <-- ..................................................
EW718224       --> GGCTCGCCCCCATAAAACCCTAGAAAGAGAGCTTCTCCATTCCCCAAA-C
EY904938       --> GGCTCGCCCCCATAAAACCCTAGAAAGAGAGCTTCTCCATTCCCCAAA-C
EV535521       --> ...ggGCCCCCATAAAACCCTAGAAAGAGAGCTTCTCCATTCCCCAAA-C
EY933655       --> ...ggGCCCCCATAAAACCCTAGAAAGAGAGCTTCTCCATTCCCCAAAAC
FD543484       --> ...ggGCCCCCATAAAACCCTAGAAAGAGAGCTTCTCCTTTCCCCAAA-C
FD939914       --> ...ggGCCCCCATAAAACCCTAGAAAGAGAGCTTCTCCATTCCCCAAA-C
EX772875       --> .........ggATAAAACCCTAGAAAGAGAGCTTCTCCATTCCCCAAA-C
FY443187       --> ........................................TCCCCAAA-C
EY946079       --> ..................................................
EX902769       --> ..................................................

               51     -    101
UN19556        --> CCGGCGGCGAAGATGAAGTACAACCCAAGAGTCACCTCCTCTCGCAGGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721902       <-- CCGGCGGCGAAGATGAAGTACAACCCAAGAGTCACCTCCTCCCGCAGGAA  Raphanus sativus var. oleiformis
EV540180       <-- CCGGCGGCGAAGATGAAGTACAACCCAAGAGTCAC--CCTCTCGCAGGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY929072       <-- CCGGCGGCGAAGATGAAGTACAACCCAAGAGTCACCTCCTCCCGCAGGAA  Raphanus sativus var. oleiformis
FD539304       <-- CCGGCGGCGAAGATGAAGTACAACCCAAGAGTCACCTCCTCTCGCAGGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX776733       <-- CCGGCGGCGAAGATGAAGTACAACCCAAGAGTCACCTCCTCTCGCAGGAA  Raphanus raphanistrum subsp. landra
EY901491       <-- ...............AAGTACAACCCAAGAGTCACCTCCTCTCGCAGGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY942245       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX906954       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD935916       <-- ..................................................  Raphanus sativus var. oleiformis
EW718224       --> CCGGCGGCGAAGATGAAGTACAACCCAAGAGTCACCTCCTCCCGCAGGAA  Raphanus sativus var. oleiformis
EY904938       --> CCGGCGGCGAAGATGAAGTACAACCCAAGAGTCACCTCCTCTCGCAGGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV535521       --> CCGGCGGCGAAGATGAAGTACAACCCAAGAGTCACC--CTCTCGCAGGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY933655       --> CCGGCGGCGAAGATGAAGTACAACCCAAGAGTCACCTCCTCCCGCAGGAA  Raphanus sativus var. oleiformis
FD543484       --> CCGGCGGCGAAGATGAAGTACAACCCAAGAGTCACCTCCTCTCGCAGGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD939914       --> CCGGCGGCGAAGATGAAGTACAACCCAAGAGTCACCTCCTCCCGCAGGAA  Raphanus sativus var. oleiformis
EX772875       --> CCGGCGGCGAAGATGAAGTACAACCCAAGAGTCACCTCCTCTCGCAGGAA  Raphanus raphanistrum subsp. landra
FY443187       --> CCGGCGGCGAAGATGAAGTACAACCCAAGAGTCACCTCCTCCCGCAGGAA  Raphanus sativus cv GSK3-1
EY946079       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX902769       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870

               101    -    151
UN19556        --> GAACCGTAAGGCTCATTTCACAGCCTCATCGAGCGAGAGGCGCGTCATCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721902       <-- GAACCGTAAGGCTCATTTCACCGCATCATCGAGCGAGAGGCGCGTCATCA  Raphanus sativus var. oleiformis
EV540180       <-- GAACCGTAAGGCTCATTTCACAGCCTCCTCGAGCGAGAGGCGCGTCATCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY929072       <-- GAAGCGTAAGGCTCATTTCACCGCCTCATCGAGCGAGAGACGCGTCATCA  Raphanus sativus var. oleiformis
FD539304       <-- GAACCGTAAGGCTCATTTCACAGCCTCATCGAGCGAGAGGCGCGTCATCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX776733       <-- GAACCGTAAGGCTCATTTCACAGCCTCATCGAGCGAGAGGCGCGTCATCA  Raphanus raphanistrum subsp. landra
EY901491       <-- GAACCGTAAGGCTCATTTCACAGCCTCATCGAGCGAGAGGCGCGTCATCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY942245       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX906954       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD935916       <-- ..................................................  Raphanus sativus var. oleiformis
EW718224       --> GAACCGTAAGGCTCATTTCACCGCATCATCGAGCGAGAGGCGCGTCATCA  Raphanus sativus var. oleiformis
EY904938       --> GAACCGTAAGGCTCATTTCACAGCCTCATCGAGCGAGAGGCGCGTCATCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV535521       --> GAACCGTAAGGCTCATTTCACAGCCTCCTCGAGCGAGAGGCGCGTCATCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY933655       --> GAAGCGTAAGGCTCATTTCACCGCCTCATCGAGCGAGAGACGCGTCATCA  Raphanus sativus var. oleiformis
FD543484       --> GAACCGTAAGGCTCATTTCACAGCCTCATCGAGCGAGAGGCGCGTCATCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD939914       --> GAACCGTAAGGCTCATTTCACCGCATCATCGAGCGAGAGGCGCGTCATCA  Raphanus sativus var. oleiformis
EX772875       --> GAACCGTAAGGCTCATTTCACAGCCTCATCGAGCGAGAGGCGCGTCATCA  Raphanus raphanistrum subsp. landra
FY443187       --> GAACCGTAAGGCTCATTTCACCGCATCATCGAGCGAGAGGCGCGTCATCA  Raphanus sativus cv GSK3-1
EY946079       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX902769       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870

               151    -    201
UN19556        --> TGAGCTCACCTCTCTCCACCGACCTCCGCGCCAAGTACAACGTCAGATCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721902       <-- TGAGCTCACCTCTCTCCACCGACCTCCGCGCCAAGTACAACGTCAGATCC  Raphanus sativus var. oleiformis
EV540180       <-- TGAGCTCACCTCTCTCCACCGACCTTCGCGCCAAGTACAACGTCAGATCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY929072       <-- TGAGCTCACCTCTCTCCACCGACCTTCGCGCGAAGTACAACGTCAGATCC  Raphanus sativus var. oleiformis
FD539304       <-- TGAGCTCACCTCTCTCCACCGACCTTCGCGCCAAGTACAACGTCAGATCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX776733       <-- TGAGCTCACCTCTCTCCACCGACCTCCGCGCGAAGTACAACGTCAGATCC  Raphanus raphanistrum subsp. landra
EY901491       <-- TGAGCTCACCTCTCTCCACCGACCTTCGCGCCAAGTACAACGTCAGATCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY942245       <-- ...............ggACCGACCTCCGCGCCAAGTACAACGTCAGATCC  Raphanus sativus cv Rat-Tail Radish #3870
EX906954       <-- ...................gGACCTCCGCGCCAAGTACAACGTCAGATCC  Raphanus sativus cv Rat-Tail Radish #3870
FD935916       <-- ...........................GCGCCAAGTACAACGTCAGATCC  Raphanus sativus var. oleiformis
EW718224       --> TGAGCTCACCTCTCTCCACCGACCTCCGCGCCAAGTACAACGTCAGATCC  Raphanus sativus var. oleiformis
EY904938       --> TGAGCTCACCTCTCTCCACCGACCTTCGCGCCAAGTACAACGTCAGATCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV535521       --> TGAGCTCACCTCTCTCCACCGACCTTCGCGCCAAGTACAACGTCAGATCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY933655       --> TGAGCTCACCTCTCTCCACCGACCTTCGCGCGAAGTACAACGTCAGATCC  Raphanus sativus var. oleiformis
FD543484       --> TGAGCTCACCTCTCTCCACCGACCTTCGCGCCAAGTACAACGTCAGATCC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD939914       --> TGAGCTCACCTCTCTCCACCGACCTCCGCGCCAAGTACAACGTCAGATCC  Raphanus sativus var. oleiformis
EX772875       --> TGAGCTCACCTCTCTCCACCGACCTCCGCGCGAAGTACAACGTCAGATCC  Raphanus raphanistrum subsp. landra
FY443187       --> TGAGCTCACCTCTCTCCACCGACCTCCGCGCCAAGTACAACGTCAGATCC  Raphanus sativus cv GSK3-1
EY946079       --> ...............ggACCGACCTCCGCGCCAAGTACAACGTCAGATCC  Raphanus sativus cv Rat-Tail Radish #3870
EX902769       --> ...................gGACCTCCGCGCCAAGTACAACGTCAGATCC  Raphanus sativus cv Rat-Tail Radish #3870

               201    -    251
UN19556        --> ATGCCTATCCGCAAGGACGACGAGGTTCAGATCGTTCGCGGTACCTACAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721902       <-- ATGCCTATCCGCAAGGACGACGAGGTTCAGATCGTTCGCGGTACCTACAA
EV540180       <-- ATGCCTATCCGCAAGGACGACGAGGTTCAGATCGTTCGCGGTACCTACAA
EY929072       <-- ATGCCTATCCGCAAGGACGACGAGGTTCAGATCGTTCGCGGTACCTACAA
FD539304       <-- ATGCCTATCCGCAAGGACGACGAGGTTCAGATCGTTCGCGGTACCTACAA
EX776733       <-- ATGCCTATACGCAAGGACGACGAGGTTCAGATCGTTCGCGGTACCTACAA
EY901491       <-- ATGCCTATCCGCAAGGACGACGAGGTTCAGATCGTTCGCGGTACCTACAA
EY942245       <-- ATGCCTATCCGCAAGGACGACGAGGTTCAGATCGTTCGCGGTACCTACAA
EX906954       <-- ATGCCTATCCGCAAGGACGACGAGGTTCAGATCGTTCGCGGTACCTACAA
FD935916       <-- ATGCCTATCCGCAAGGACGACGAGGTTCAGATCGTTCGCGGTACCTACAA
EW718224       --> ATGCCTATCCGCAAGGACGACGAGGTTCAGATCGTTCGCGGTACCTACAA
EY904938       --> ATGCCTATCCGCAAGGACGACGAGGTTCAGATCGTTCGCGGTACCTACAA
EV535521       --> ATGCCTATCCGCAAGGACGACGAGGTTCAGATCGTTCGCGGTACCTACAA
EY933655       --> ATGCCTATCCGCAAGGACGACGAGGTTCAGATCGTTCGCGGTACCTACAA
FD543484       --> ATGCCTATCCGCAAGGACGACGAGGTTCAGATCGTTCGCGGTACCTACAA
FD939914       --> ATGCCTATCCGCAAGGACGACGAGGTTCAGATCGTTCGCGGTACCTACAA
EX772875       --> ATGCCTATACGCAAGGACGACGAGGTTCAGATCGTTCGCGGTACCTACAA
FY443187       --> ATGCCTATCCGCAAGGACGACGAGGTTCAGATCGTTCGCGGTACCTACAA
EY946079       --> ATGCCTATCCGCAAGGACGACGAGGTTCAGATCGTTCGCGGTACCTACAA
EX902769       --> ATGCCTATCCGCAAGGACGACGAGGTTCAGATCGTTCGCGGTACCTACAA

               251    -    301
UN19556        --> GGGACGTGAGGGAAAGGTTGTCCAGGTGTACCGTCGCAAGTGGGTGATTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721902       <-- GGGACGTGAGGGAAAGGTTGTCCAGGTGTACCGTCGCAAGTGGGTGATTC  Raphanus sativus var. oleiformis
EV540180       <-- GGGACGTGAGGGAAAGGTAGTCCAGGTGTACCGTCGCAAGTGGGTGATTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY929072       <-- GGGACGTGAGGGAAAGGTTGTCCAGGTGTACCGTCGCAAGTGGGTGATTC  Raphanus sativus var. oleiformis
FD539304       <-- GGGACGTGAGGGAAAGGTAGTCCAGGTGTACCGTCGCAAGTGGGTGATTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX776733       <-- GGGACGTGAGGGAAAGGTTGTCCAGGTGTACCGTCGCAAGTGGGTGATTC  Raphanus raphanistrum subsp. landra
EY901491       <-- GGGACGTGAGGGAAAGGTAGTCCAGGTGTACCGTCGCAAGTGGGTGATTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY942245       <-- GGGACGTGAGGGAAAGGTTGTCCAGGTGTACCGTCGCAAGTGGGTGATTC  Raphanus sativus cv Rat-Tail Radish #3870
EX906954       <-- GGGACGTGAGGGAAAGGTTGTCCAGGTGTACCGTCGCAAGTGGGTGATTC  Raphanus sativus cv Rat-Tail Radish #3870
FD935916       <-- GGGACGTGAGGGAAAGGTTGTCCAGGTGTACCGTCGCAAGTGGGTGATTC  Raphanus sativus var. oleiformis
EW718224       --> GGGACGTGAGGGAAAGGTTGTCCAGGTGTACCGTCGCAAGTGGGTGATTC  Raphanus sativus var. oleiformis
EY904938       --> GGGACGTGAGGGAAAGGTAGTCCAGGTGTACCGTCGCAAGTGGGTGATTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV535521       --> GGGACGTGAGGGAAAGGTAGTCCAGGTGTACCGTCGCAAGTGGGTGATTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY933655       --> GGGACGTGAGGGAAAGGTTGTCCAGGTGTACCGTCGCAAGTGGGTGATTC  Raphanus sativus var. oleiformis
FD543484       --> GGGACGTGAGGGAAAGGTAGTCCAGGTGTACCGTCGCAAGTGGGTGATTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD939914       --> GGGACGTGAGGGAAAGGTTGTCCAGGTGTACCGTCGCAAGTGGGTGATTC  Raphanus sativus var. oleiformis
EX772875       --> GGGACGTGAGGGAAAGGTTGTCCAGGTGTACCGTCGCAAGTGGGTGATTC  Raphanus raphanistrum subsp. landra
FY443187       --> GGGACGTGAGGGAAAGGTTGTCCAGGTGTACCGTCGCAAGTGGGTGATTC  Raphanus sativus cv GSK3-1
EY946079       --> GGGACGTGAGGGAAAGGTTGTCCAGGTGTACCGTCGCAAGTGGGTGATTC  Raphanus sativus cv Rat-Tail Radish #3870
EX902769       --> GGGACGTGAGGGAAAGGTTGTCCAGGTGTACCGTCGCAAGTGGGTGATTC  Raphanus sativus cv Rat-Tail Radish #3870

               301    -    351
UN19556        --> ACATCGAGAGGATCACGAGGGAGAAGGTGAACGGAACCACCGTGAATGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721902       <-- ACATCGAGAGGATCACGAGGGAGAAGGTGAACGGAACCACCGTGAATGTC
EV540180       <-- ACATCGAGAGGATCACGAGGGAGAAGGTGAACGGAACCACCGTGAATGTC
EY929072       <-- ACATCGAGAGGATCACGAGGGAGAAGGTGAACGGAACCACCGTGAATGTC
FD539304       <-- ACATCGAGAGGATCACGAGGGAGAAGGTGAACGGAACCACCGTGAATGTC
EX776733       <-- ACATCGAGAGGATCACGAGGGAGAAGGTGAACGGAACCACCGTGAATGTC
EY901491       <-- ACATCGAGAGGATCACGAGGGAGAAGGTGAACGGAACCACCGTGAATGTC
EY942245       <-- ACATCGAGAGGATCACGAGGGAGAAGGTGAACGGAACCACCGTGAATGTC
EX906954       <-- ACATCGAGAGGATCACGAGGGAGAAGGTGAACGGAACCACCGTGAATGTC
FD935916       <-- ACATCGAGAGGATCACGAGGGAGAAGGTGAACGGAACCACCGTGAATGTC
EW718224       --> ACATCGAGAGGATCACGAGGGAGAAGGTGAACGGAACCACCGTGAATGTC
EY904938       --> ACATCGAGAGGATCACGAGGGAGAAGGTGAACGGAACCACCGTGAATGTC
EV535521       --> ACATCGAGAGGATCACGAGGGAGAAGGTGAACGGAACCACCGTGAATGTC
EY933655       --> ACATCGAGAGGATCACGAGGGAGAAGGTGAACGGAACCACCGTGAATGTC
FD543484       --> ACATCGAGAGGATCACGAGGGAGAAGGTGAACGGAACCACCGTGAATGTC
FD939914       --> ACATCGAGAGGATCACGAGGGAGAAGGTGAACGGAACCACCGTGAATGTC
EX772875       --> ACATCGAGAGGATCACGAGGGAGAAGGTGAACGGAACCACCGTGAATGTC
FY443187       --> ACATCGAGAGGATCACGAGGGAGAAGGTGAACGGAACCACCGTGAATGTC
EY946079       --> ACATCGAGAGGATCACGAGGGAGAAGGTGAACGGAACCACCGTGAATGTC
EX902769       --> ACATCGAGAGGATCACGAGGGAGAAGGTGAACGGAACCACCGTGAATGTC

               351    -    401
UN19556        --> GGAGTTCAGCCGTCGAAAGTGGTGATTACGAAGCTTCGTCTCGATAAGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721902       <-- GGAGTTCAGCCGTCGAAAGTGGTGATTACGAAGCTCCGTCTCGATAAGGA  Raphanus sativus var. oleiformis
EV540180       <-- GGAGTTCAGCCGTCGAAAGTGGTTATTACCAAGCTTCGTCTCGACAAGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY929072       <-- GGAGTTCAGCCGTCGAAAGTGGTGATTACCAAGCTTCGTCTCGACAAGGA  Raphanus sativus var. oleiformis
FD539304       <-- GGAGTTCAGCCGTCGAAAGTGGTTATTACCAAGCTTCGTCTCGACAAGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX776733       <-- GGTGTTCAGCCGTCGAAAGTGGTGATTACGAAGCTTCGTCTTGATAAGGA  Raphanus raphanistrum subsp. landra
EY901491       <-- GGAGTTCAGCCGTCGAAAGTGGTTATTACCAAGCTTCGTCTCGACAAGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY942245       <-- GGAGTTCAGCCGTCGAAAGTGGTGATTACGAAGCTCCGTCTCGATAAGGA  Raphanus sativus cv Rat-Tail Radish #3870
EX906954       <-- GGAGTTCAGCCGTCGAAAGTGGTGATTACGAAGCTCCGTCTCGATAAGGA  Raphanus sativus cv Rat-Tail Radish #3870
FD935916       <-- GGAGTTCAGCCGTCGAAAGTGGTGATTACGAAGCTCCGTCTCGATAAGGA  Raphanus sativus var. oleiformis
EW718224       --> GGAGTTCAGCCGTCGAAAGTGGTGATTACGAAGCTCCGTCTCGATAAGGA  Raphanus sativus var. oleiformis
EY904938       --> GGAGTTCAGCCGTCGAAAGTGGTTATTACCAAGCTTCGTCTCGACAAGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV535521       --> GGAGTTCAGCCGTCGAAAGTGGTTATTACCAAGCTTCGTCTCGACAAGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY933655       --> GGAGTTCAGCCGTCGAAAGTGGTGATTACCAAGCTTCGTCTCGACAAGGA  Raphanus sativus var. oleiformis
FD543484       --> GGAGTTCAGCCGTCGAAAGTGGTTATTACCAAGCTTCGTCTCGACAAGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD939914       --> GGAGTTCAGCCGTCGAAAGTGGTGATTACGAAGCTCCGTCTCGATAAGGA  Raphanus sativus var. oleiformis
EX772875       --> GGTGTTCAGCCGTCGAAAGTGGTGATTACGAAGCTTCGTCTTGATAAGGA  Raphanus raphanistrum subsp. landra
FY443187       --> GGAGTTCAGCCGTCGAAAGTGGTGATTACGAAGCTCCGTCTCGATAAGGA  Raphanus sativus cv GSK3-1
EY946079       --> GGAGTTCAGCCGTCGAAAGTGGTGATTACGAAGCTCCGTCTCGATAAGGA  Raphanus sativus cv Rat-Tail Radish #3870
EX902769       --> GGAGTTCAGCCGTCGAAAGTGGTGATTACGAAGCTCCGTCTCGATAAGGA  Raphanus sativus cv Rat-Tail Radish #3870

               401    -    451
UN19556        --> CAGGAAGTCGCTTTTGGAGAGGAAGGCCAAGGGACGTGCTGCCGCGGATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721902       <-- CAGGAAGTCGCTTTTGGAGAGGAAGGCCAAGGGACGTGCTGCCGCGGATA  Raphanus sativus var. oleiformis
EV540180       <-- CAGGAAGTCGCTTTTGGAGAGGAAGGCCAAGGGACGTGCTGCTGCGGATA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY929072       <-- CAGGAAGTCGCTTTTGGAGAGGAAGGCCAAGGGACGTGCTGCTGCGGATA  Raphanus sativus var. oleiformis
FD539304       <-- CAGGAAGTCGCTTTTGGAGAGGAAGGCCAAGGGACGTGCTGCTGCGGATA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX776733       <-- CAGGAAGTCGCTTTTGGAGAGGAAGGCCAAGGGACGAGCTGCCGCGGACA  Raphanus raphanistrum subsp. landra
EY901491       <-- CAGGAAGTCGCTTTTGGAGAGGAAGGCCAAGGGACGTGCTGCTGCGGATA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY942245       <-- CAGGAAGTCGCTTTTGGAGAGGAAGGCCAAGGGACGTGCTGCCGCGGATA  Raphanus sativus cv Rat-Tail Radish #3870
EX906954       <-- CAGGAAGTCGCTTTTGGAGAGGAAGGCCAAGGGACGTGCTGCCGCGGATA  Raphanus sativus cv Rat-Tail Radish #3870
FD935916       <-- CAGGAAGTCGCTTTTGGAGAGGAAGGCCAAGGGACGTGCTGCCGCGGATA  Raphanus sativus var. oleiformis
EW718224       --> CAGGAAGTCGCTTTTGGAGAGGAAGGCCAAGGGACGTGCTGCCGCGGATA  Raphanus sativus var. oleiformis
EY904938       --> CAGGAAGTCGCTTTTGGAGAGGAAGGCCAAGGGACGTGCTGCTGCGGATA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV535521       --> CAGGAAGTCGCTTTTGGAGAGGAAGGCCAAGGGACGTGCTGCTGCGGATA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY933655       --> CAGGAAGTCGCTTTTGGAGAGGAAGGCCAAGGGACGTGCTGCTGCGGATA  Raphanus sativus var. oleiformis
FD543484       --> CAGGAAGTCGCTTTTGGAGAGGAAGGCCAAGGGACGTGCTG.........  Raphanus raphanistrum subsp. raphanistrum (MS)
FD939914       --> CAGGAAGTCGCTTTTGGAGAGGAAGGCCAAGGGACGTGCTGCCGCGGATA  Raphanus sativus var. oleiformis
EX772875       --> CAGGAAGTCGCTTTTGGAGAGGAAGGCCAAGGGACGAGCTGCCGCGGACA  Raphanus raphanistrum subsp. landra
FY443187       --> CAGGAAGTCGCTTTTGGAGAGGAAGGCCAAGGGACGTGCTGCCGCGGATA  Raphanus sativus cv GSK3-1
EY946079       --> CAGGAAGTCGCTTTTGGAGAGGAAGGCCAAGGGACGTGCTGCCGCGGATA  Raphanus sativus cv Rat-Tail Radish #3870
EX902769       --> CAGGAAGTCGCTTTTGGAGAGGAAGGCCAAGGGACGTGCTGCCGCGGATA  Raphanus sativus cv Rat-Tail Radish #3870

               451    -    501
UN19556        --> AGGACAAGGGTACTAAGTTCACTGCTGAGGATGTTATGCAGAACGTTGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721902       <-- AGGACAAGGGTACTAAGTTCACTGCTGAGGATGTTATGCAGAACGTTGAT
EV540180       <-- AGGACAAGGGTACTAAGTTCACTGCTGAGGATGTTATGCAGAACGTTGAT
EY929072       <-- AGGACAAGGGTACTAAGTTCACTGCTGAGGATGTTATGCAGAACGTTGAT
FD539304       <-- AGGACAAGGGTACTAAGTTCACTGCTGAGGATGTTATGCAGAACGTTGGT
EX776733       <-- AGGACAAGGGTACTAAGTTCACTGCTGAGGATGTTATGCAGAACGTTGAT
EY901491       <-- AGGACAAGGGTACTAAGTTCACTGCTGAGGATGTTATGCAGAACGTTGAT
EY942245       <-- AGGACAAGGGTACTAAGTTCACTGCTGAGGATGTTATGCAGAACGTTGAT
EX906954       <-- AGGACAAGGGTACTAAGTTCACTGCTGAGGATGTTATGCAGAACGTTGAT
FD935916       <-- AGGACAAGGGTACTAAGTTCACTGCTGAGGATGTTATGCAGAACGTTGAT
EW718224       --> AGGACAAGGGTACTAAGTTCACTGCTGAGGATGTTATGCAGAACGTTGAT
EY904938       --> AGGACAAGGGTACTAAGTTCACTGCTGAGGATGTTATGCAGAACGTTGAT
EV535521       --> AGGACAAGGGTACTAAGTTCACTGCTGAGGATGTTATGCAGAACGTTGAT
EY933655       --> AGGACAAGGGTACTAAGTTCACTGCTGAGGATGTTATGCAGAACGTTGAT
FD543484       --> ..................................................
FD939914       --> AGGACAAGGGTACTAAGTTCACTGCTGAGGATGTTATGCAGAACGTTGAT
EX772875       --> AGGACAAGGGTACTAAGTTCACTGCTGAGGATGTTATGCAGAACGTTGAT
FY443187       --> AGGACAAGGGTACTAAGTTCACTGCTGAGGATGTTATGCAGAACGTTGAT
EY946079       --> AGGACAAGGGTACTAAGTTCACTGCTGAGGATGTTATGCAGAACGTTGAT
EX902769       --> AGGACAAGGGTACTAAGTTCACTGCTGAGGATGTTATGCAGAACGTTGAT

               501    -    551
UN19556        --> TAAAACAAAGAGTTGATTTGAGTAAGGTGTTTTGTCTTTTAAGTTTAAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721902       <-- TAAAACAAAGAGTTGATTTGAGTAAGGTGTTTTGTCTTTTAAGTTTAAAT  Raphanus sativus var. oleiformis
EV540180       <-- TAAAGCAAAGAGTTGATTTGAGCAAGGTGTTTTGTCTTTTAAGTTTAAAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY929072       <-- TAAAACAAAGAGTTGATTTGAGTAAGGTGTTTTGTCTTTTAAGTTTAAAT  Raphanus sativus var. oleiformis
FD539304       <-- TAAAGCAAAGAGTTGATTTGAGTAAGGTGTTTTGTCTTTTAAGTTTAAAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX776733       <-- TAAAACAAAGAGTTGATTTGAGTAAGGTGTTTTGTCTTTTAAGTTTAAAT  Raphanus raphanistrum subsp. landra
EY901491       <-- TAAAGCAAAGAGTTGATTTGAGTAAGGTGTTT-GTCTTTTAAGTTTAAAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY942245       <-- TAAAACAAAGAGTTGATTTGAGTAAGGTGTTTTGTCTTTTAAGTTTAAAT  Raphanus sativus cv Rat-Tail Radish #3870
EX906954       <-- TAAAACAAAGAGTTGATTTGAGTAAGGTGTTTTGTCTTTTAAGTTTAAAT  Raphanus sativus cv Rat-Tail Radish #3870
FD935916       <-- TAAAACAAAGAGTTGATTTGAGTAAGGTGTTTTGTCTTTTAAGTTTAAAT  Raphanus sativus var. oleiformis
EW718224       --> TAAAACAAAGAGTTGATTTGAGTAAGGTGTTTTGTCTTTTAAGTTTAAAT  Raphanus sativus var. oleiformis
EY904938       --> TAAAGCAAAGAGTTGATTTGAGTAAGGTGTTT-GTCTTTTAAGTTTAAAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV535521       --> TAAAGCAAAGAGTTGATTTGAGCAAGGTGTTTTGTCTTTTAAGTTTAAAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY933655       --> TAAAACAAAGAGTTGATTTGAGTAAGGTGTTTTGTCTTTTAAGTTTAAAT  Raphanus sativus var. oleiformis
FD543484       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD939914       --> TAAAACAAAGAGTTGATTTGAGTAAAGTGTTTTGTCTTTTAAG.......  Raphanus sativus var. oleiformis
EX772875       --> TAAAACAAAGAGTTGATTTGAGTAAGGTGTTTTGTCTTTTAAGTTTAAAT  Raphanus raphanistrum subsp. landra
FY443187       --> TAAAACAAAGAGTTGATTTGAGTAAGGTGTTTTGTCTTTTAAGTTTAAAT  Raphanus sativus cv GSK3-1
EY946079       --> TAAAACAAAGAGTTGATTTGAGTAAGGTGTTTTGTCTTTTAAGTTTAAAT  Raphanus sativus cv Rat-Tail Radish #3870
EX902769       --> TAAAACAAAGAGTTGATTTGAGTAAGGTGTTTTGTCTTTTAAGTTTAAAT  Raphanus sativus cv Rat-Tail Radish #3870

               551    -    601
UN19556        --> CATAAGCAAGTACTTTTGTGTTTTAAATTTTGTTTTGTCGGACATGAGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721902       <-- CATAAGCAAGTACTTTTGTGTTTTAAATTTTGTTTTGTCGGACATGAGTA
EV540180       <-- CATAAGCAAGTACTTTTGTGTTTTAAATTTTGTTTTGTCGGACATGAGTA
EY929072       <-- CATAAGCAAGTACTTTTGTGTTTT..........................
FD539304       <-- CATAAGCAAGTACTTTTGTGTTTTAAATTTTGTTTTGTCGGACATGAGTA
EX776733       <-- CATAAGCAAGTACTTTTGTGTTTTAAATTTTGTTTTGTCGGACATGGGTA
EY901491       <-- CATAAGCAAGTACTTTTGTGTTTTAAATTTTGTTTTGTCGGACATGAGTA
EY942245       <-- CATAAGCAAGTACTTTTGTGTTTTAAATTTTGTTTTGTCGGACATGAGTA
EX906954       <-- CATAAGCAAGTACTTTTGTGTTTTAAATTTTGTTTTGTCGGACATGAGTA
FD935916       <-- CATAAGCAAGTACTTTTGTGTTTTAAATTTTGTTTTGTCGGACATGAGTA
EW718224       --> CATAAGCAAGTACTTTTGTGTTTTAAATTTTGTTTTGTCGGACATGAGTA
EY904938       --> CATAAGCAAGTACTTTTGTGTTTTAAATTTTGTTTTGTCGGACATGAGTA
EV535521       --> CATAAGCAAGTACTTTTGTGTTTTAAATTTTGTTTTGTCGGACATGAGTA
EY933655       --> CATAAGCAAGTACTTTTGTGTTTT..........................
FD543484       --> ..................................................
FD939914       --> ..................................................
EX772875       --> CATAAGCAAGTACTTTTGTGTTTTAAATTTTGTTTTGTCGGACATGGGTA
FY443187       --> CATAAGCAAGTACTTTTGTGTTTT..........................
EY946079       --> CATAAGCAAGTACTTTTGTGTTTTAAATTTTGTTTTGTCGGACATGAGTA
EX902769       --> CATAAGCAAGTACTTTTGTGTTTTAAATTTTGTTTTGTCGGACATGAGTA

               601    -    651
UN19556        --> CGTTTCATTTCAATTTGGATTATGAGTTTGACTCTTTAGCCCTTATCTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721902       <-- CGTTTCATTTCAATTTGGATTATGAGTTTGACTCTTTAGCCCTTATCTAT
EV540180       <-- CGTTTCATTTCAATTTGGATTATGAGTTTGACcc................
EY929072       <-- ..................................................
FD539304       <-- CGTTTCATTTCAATTTGGATTATGAGTTTGACTCTTTAGCCGTTATCTAT
EX776733       <-- CGTTTCATTTCAATTTGGATTATGAGTTTGACTCTTTAGCCCTTATCTAT
EY901491       <-- CGTTTCATTTCAATTTGGATTATGAGTTTGACTCTTTAGCCgtt......
EY942245       <-- CGTTTCATTTCAATTTGGATTATGAGTTTGACcc................
EX906954       <-- CGTTTCATTTCAATTTGGATTATGAGTTTGACTCTTTAGCCCTTATCTAT
FD935916       <-- CGTTTCATTTCAATTTGGATTATGAGTTTGACTCTTTAGCCCTTATCTAT
EW718224       --> CGTTTCATTTCAATTTGGATTATGAGTTTGACTCTTTAGCC-TTATCTAT
EY904938       --> CGTTTCATTTCAATTTGGATTATGAGTTTGACTCTTTAGCCgtt......
EV535521       --> CGTTTCATTTCAATTTGGATTATGAGTTTGACcc................
EY933655       --> ..................................................
FD543484       --> ..................................................
FD939914       --> ..................................................
EX772875       --> CGTTTCATTTCAATTTGGATTATGAGTTTGACTCTTTAGCCCTTATCTAT
FY443187       --> ..................................................
EY946079       --> CGTTTCATTTCAATTTGGATTATGAGTTTGACcc................
EX902769       --> CGTTTCATTTCAATTTGGATTATGAGTTTGACTCTTTAGCCCTTATCTAT

               651    -    701
UN19556        --> GGTGATGCTTTTTATATGAATGTTTGCCTCGTCCTAGGGATTGCGCTAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721902       <-- GGTGATGCTTTTTATATG................................  Raphanus sativus var. oleiformis
EV540180       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY929072       <-- ..................................................  Raphanus sativus var. oleiformis
FD539304       <-- GTTGATGCTTTTTATATTAATGTTTGCtctgtg.................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX776733       <-- GTTGATGCTTTTTAT...................................  Raphanus raphanistrum subsp. landra
EY901491       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY942245       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX906954       <-- GGTGATGCTTTTTATAcg................................  Raphanus sativus cv Rat-Tail Radish #3870
FD935916       <-- GGTGATGCTTTTTATATGAATGTTTGCCTCGTCCTAGGGATTGCGCTAGA  Raphanus sativus var. oleiformis
EW718224       --> GGTGATGCTTTT-ATATG................................  Raphanus sativus var. oleiformis
EY904938       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV535521       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY933655       --> ..................................................  Raphanus sativus var. oleiformis
FD543484       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD939914       --> ..................................................  Raphanus sativus var. oleiformis
EX772875       --> GTTGATGCTTTTatac..................................  Raphanus raphanistrum subsp. landra
FY443187       --> ..................................................  Raphanus sativus cv GSK3-1
EY946079       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX902769       --> GGTGATGCTTTTTATAcg................................  Raphanus sativus cv Rat-Tail Radish #3870

               701    -    751
UN19556        --> GATTTAGTGAA
                   ~~~~~~~~~~~
EW721902       <-- ...........
EV540180       <-- ...........
EY929072       <-- ...........
FD539304       <-- ...........
EX776733       <-- ...........
EY901491       <-- ...........
EY942245       <-- ...........
EX906954       <-- ...........
FD935916       <-- GATTTAGTGAA
EW718224       --> ...........
EY904938       --> ...........
EV535521       --> ...........
EY933655       --> ...........
FD543484       --> ...........
FD939914       --> ...........
EX772875       --> ...........
FY443187       --> ...........
EY946079       --> ...........
EX902769       --> ...........