1      -     51
UN19575        --> GGGTCCTCTTAAAAGCGTTTTGTTCTCACTCTCTGCCGTCTCTCTCTCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574546       <-- ..................................................
EX751214       <-- ..................................................
EY896419       <-- ..................................................
EV531156       <-- ..................................................
EX909603       <-- ..................................................
EX767267       <-- ..................................................
EX901464       <-- ..................................................
EX905956       --> GGGTCCTCTTAAAAGCGTCTCGTTTTCACTCTCTGCCGTCTCTCTCTCAC
EV570189       --> ...ggCTCTTAAA-GCGTTTTGTTCTCACTCTCTGCCGTCTCTCTCTCAC
EX746912       --> ........ggAAAAGCGTTTTGTTCTCACTCTCTGCCGTCTCTCTCTCAC
EV526754       --> .......................................ggCTCTCTCAC
EY901010       --> ..............................................ggAC
EY913845       --> ...............................................gAC
EW733578       --> ..................................................
FY449551       --> ..................................................
EY897363       --> ..................................................

               51     -    101
UN19575        --> TCTCTGTAGCTTTGACCCATACTCTCTGTTTCTCT--TACATTCATGGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574546       <-- ..................................................
EX751214       <-- ..................................................
EY896419       <-- ..................................................
EV531156       <-- ..................................................
EX909603       <-- ..................................................
EX767267       <-- ..................................................
EX901464       <-- ..................................................
EX905956       --> TCTCTGTAGCTTTGACCCATACTCTCTGTTTCTCT--TACAATCATGGCC
EV570189       --> TCTCTGTAGCTTTGACCCATACTCTCTGTTTCTCT--TACAATCATGGCC
EX746912       --> TCTCTGTAGCTTTGACCCATACTCTCTGTTTCTCT--TACATTCATGGCC
EV526754       --> TCTCTGTAGCTTTGACCCATACTCTCTGTTTCTCT--TACATCCATGGCC
EY901010       --> TCTCTGTAGCTTTGACCCATACTCTCTGTTTCTCT--TACATTCATGGCC
EY913845       --> TCTCTGTAGCTTTGACCCATACTCTCTGTTTCTCT--TACAATCATGGCC
EW733578       --> ...ggGTAGCTTTGACCCATACTCTCTGTTTCTCT--TACATTCATGGCC
FY449551       --> ..........TTTGACCCATACTCTCTGTTTCTCTCTTACAGCCATGGCC
EY897363       --> ..................................................

               101    -    151
UN19575        --> GCCACCGTAGAAATCGACGCCGAGATTCAGCAGCAGCTTACCAACGAGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574546       <-- GCCACCGTAGAAATCGACGCCGAGATTCAGCAGCAGCTTACCAACGAGGT
EX751214       <-- ................ACGCCGAGATTCAGCAGCAGCTTACCAACGAGGT
EY896419       <-- ..........................................AACGAGGT
EV531156       <-- ..................................................
EX909603       <-- ..................................................
EX767267       <-- ..................................................
EX901464       <-- ..................................................
EX905956       --> GCCACCGTAGAAATCGACGCCGAGATTCAGCAGCAGCTTACCAACGAGGT
EV570189       --> GCCACCGTAGAAATCGACGCCGAGATTCAGCAGCAGCTTACCAACGAGGT
EX746912       --> GCCACCGTAGAAATCGACGCCGAGATTCAGCAGCAGCTTACCAACGAGGT
EV526754       --> GCCACCGTAAAAATCGACGCCGAGATTCAGCAGCAGCTTACCAACGAGGT
EY901010       --> GCCACCGTAGAAATCGACGCCGAGATTCAGCAGCAGCTTACCAACGAGGT
EY913845       --> GCCACCGTAGAAATCGACGCCGAGATTCAGCAGCAGCTTACCAACGAGGT
EW733578       --> GCCACCGTAGAAATCGACGCCGAGATTCAGCAGCAGCTTACCAACGAGGT
FY449551       --> GCCACCGTAGAAATCGACGCCGAGATTCAGCAGCAGCTTACCAACGAGGT
EY897363       --> ..................................................

               151    -    201
UN19575        --> CAAGCTCTTCAACCGCTGGACCTACGACGACGTTTCGGTGACAGACATCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574546       <-- CAAGCTCTTCAACCGCTGGACCTACGACGACGTTTCGGTGACAGACATCA
EX751214       <-- CAAGCTCTTCAACCGCTGGACCTACGACGACGTTTCGGTGACAGACATCA
EY896419       <-- CAAGCTCTTCAACCGC-GGACCTACGACGACGTTTCGGTGACAGACATCA
EV531156       <-- .........................GACGACGTTTCGGTGACAGACATCA
EX909603       <-- ..................................................
EX767267       <-- ..................................................
EX901464       <-- ..................................................
EX905956       --> CAAGCTCTTCAACCGCTGGACCTACGACGACGTTTCGGTGACAGACATCA
EV570189       --> CAAGCTCTTCAACCGCTGGACCTACGACGACGTTTCGGTGACAGACATCA
EX746912       --> CAAGCTCTTCAACCGCTGGACCTACGACGACGTTTCGGTGACAGACATCA
EV526754       --> CAAGCTCTTCAACCGCTGGACCTACGACGACGTTTCGGTGACAGACATCA
EY901010       --> CAAGCTCTTCAACCGC-GGACCTACGACGACGTTTCGGTGACAGACATCA
EY913845       --> CAAGCTCTTCAACCGCTGGACCTACGACGACGTTTCGGTGACAGACATCA
EW733578       --> CAAGCTCTTCAACCGCTGGACCTACGACGACGTTTCGGTGACAGACATCA
FY449551       --> CAAGCTCTTCAACCGCTGGACCTACGACGACGTTTCGGTGACAGACATCA
EY897363       --> ..................................................

               201    -    251
UN19575        --> GTCTTGTTGACTACATCGGAGTCCAGGCAGCTAAACACGCCACCTTCGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574546       <-- GTCTTGTTGACTACATCGGAGTCCAGGCAGCTAAACACGCCACCTTTGTC
EX751214       <-- GTCTTGTTGACTACATCGGAGTCCAGGCAGCTAAACACGCCACCTTCGTC
EY896419       <-- GTCTTGTTGACTACATCGGAGTCCAGGCAGCTAAACACGCCACCTTCGTC
EV531156       <-- GTCTTGTTGACTACATCGGAGTCCAGGCAGCTAAACACGCCACCTTCGTC
EX909603       <-- ...............................................GTC
EX767267       <-- .................................................C
EX901464       <-- ..................................................
EX905956       --> GTCTTGTTGGCTACATCGGAGTCCAGGCAGCTAAACACGCCACCTTCGTC
EV570189       --> GTCTTGTTGACTACATCGGAGTCCAGGCAGCTAAACACGCCACCTTTGTC
EX746912       --> GTCTTGTTGACTACATCGGAGTCCAGGCAGCTAAACACGCCACCTTCGTC
EV526754       --> GTCTTGTTGACTACATCGGAGTCCAGGCAGCTAAACACGCCACCTTCGTC
EY901010       --> GTCTTGTTGACTACATCGGAGTCCAGGCAGCTAAACACGCCACCTTCGTC
EY913845       --> GTCTTGTTGACTACATCGGAGTCCAGGCAGCTAAACACGCCACCTTCGTC
EW733578       --> GTCTTGTTGACTACATCGGAGTCCAGGCAGCTAAACACGCCACCTTCGTC
FY449551       --> GTCTTGTTGACTACATCGGAGTCCAGGCAGCCAAACACGCCACCTTTGTC
EY897363       --> ..................................................

               251    -    301
UN19575        --> CCCCACACCGCCGGAAGATACTCTGTAAAGAGATTCAGGAAGGCTCAGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574546       <-- CCCCACACCGCCGGAAGATACTCTGTAAAGAGATTCAGGAAGGCTCAGTG  Raphanus raphanistrum subsp. landra
EX751214       <-- CCCCACACCGCCGGAAGATACTCTGTAAAGAGATTCAGGAAGGCTCAGTG  Raphanus raphanistrum subsp. maritimus
EY896419       <-- CCCCACACCGCCGGAAGATACTCTGTAAAGAGATTCAGGAAGGCTCAGTG  Raphanus raphanistrum subsp. maritimus
EV531156       <-- CCCCACACCGCCGGAAGATACTCTGTAAAGAGATTCAGGAAGGCTCAGTG  Raphanus raphanistrum subsp. maritimus
EX909603       <-- CCCCACACCGCCGGAAGATACTCTGTCAAGAGATTCAGGAAGGCTCAGTG  Raphanus sativus cv Rat-Tail Radish #3870
EX767267       <-- CCCCACACCGCCGGAAGATACTCTGTCAAGAGATTCAGGAAGGCTCAGTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX901464       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX905956       --> CCCCACACCGCCGGAAGATACTCTGTCAAGAGATTCAGGAAGGCTCAGTG  Raphanus sativus cv Rat-Tail Radish #3870
EV570189       --> CCCCACACCGCCGGAAGATACTCTGTAAAGAGATTCAGGAAGGCTCAGTG  Raphanus raphanistrum subsp. landra
EX746912       --> CCCCACACCGCCGGAAGATACTCTGTAAAGAGATTCAGGAAGGCTCAGTG  Raphanus raphanistrum subsp. maritimus
EV526754       --> CCCCACACCGCCGGAAGATACTCTGTAAAGAGATTCAGGAAGGCTCAGTG  Raphanus raphanistrum subsp. maritimus
EY901010       --> CCCCACACCGCCGGAAGATACTCTGTAAAGAGATTCAGGAAGGCTCAGTG  Raphanus raphanistrum subsp. maritimus
EY913845       --> CCCCACACCGCCGGAAGATACTCTGTCAAGAGATTCAGGAAGGCTCAGTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW733578       --> CCCCACACCGCCGGAAGATACTCTGTAAAGAGATTCAGGAAGGCTCAGTG  Raphanus sativus cv Rat-Tail Radish #3870
FY449551       --> CCCCACACCGCCGGAAGATACTCTGTAAAGAGATTCAGGAAGGCTCAGTG  Raphanus sativus cv GSK3-1
EY897363       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               301    -    351
UN19575        --> TCCCATCGTCGAGAGGCTAACAAACTCTCTCATGATGCACGGAAGAAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574546       <-- TCCCATCGTCGAGAGGCTAACAAACTCTTTCATGATGCACGGAAGAAACA  Raphanus raphanistrum subsp. landra
EX751214       <-- TCCCATCGTCGAGAGGCTAACAAACTCTCTCATGATGCACGGAAGAAACA  Raphanus raphanistrum subsp. maritimus
EY896419       <-- TCCCATCGTCGAGAGGCTAACAAACTCTCTCATGATGCACGGAGGAAACA  Raphanus raphanistrum subsp. maritimus
EV531156       <-- TCCCATCGTCGAGAGGCTAACAAACTCTCTCATGATGCACGGAAGAAACA  Raphanus raphanistrum subsp. maritimus
EX909603       <-- CCCCATCGTTGAGAGGCTCACGAACTCTCTCATGATGCACGGAAGAAACA  Raphanus sativus cv Rat-Tail Radish #3870
EX767267       <-- CCCCATCGTTGAGAGGCTCACGAACTCTCTCATGATGCACGGAAGAAACA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX901464       <-- ............GAGGCTCACGAACTCTCTCATGATGCACGGAAGAAACA  Raphanus sativus cv Early Scarlet Globe
EX905956       --> CCCCATCGTTGAGAGGCTCACGAACTCTCTCATGATGCACGGAAGAAACA  Raphanus sativus cv Rat-Tail Radish #3870
EV570189       --> TCCCATCGTCGAGAGGCTAACAAACTCTCTCATGATGCACGGAAGAAACA  Raphanus raphanistrum subsp. landra
EX746912       --> TCCCATCGTCGAGAGGCTAACAAACTCTCTCATGATGCACGGAAGAAACA  Raphanus raphanistrum subsp. maritimus
EV526754       --> TCCCATCGTCGAGAGGCTAACAAACTCTCTCATGATGCACGGAAGAAACA  Raphanus raphanistrum subsp. maritimus
EY901010       --> TCCCATCGTCGAGAGGCTAACAAACTCTCTCATGATGCACGGAGGAAACA  Raphanus raphanistrum subsp. maritimus
EY913845       --> CCCCATCGTTGAGAGGCTCACGAACTCTCTCATGATGCACGGAAGAAACA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW733578       --> TCCCATCGTCGAGAGGCTAACAAACTCTCTCATGATGCACGGAAGAAACA  Raphanus sativus cv Rat-Tail Radish #3870
FY449551       --> CCCCATCGTCGAGAGGCTCACGAACTCTCTCATGATGCACGGAAGAAACA  Raphanus sativus cv GSK3-1
EY897363       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               351    -    401
UN19575        --> ACGGAAAGAAATTGATGGCTGTGAGAATCATCAAGCACGCCATGGAGATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574546       <-- ACGGAAAGAAATTGATGGCTGTGAGAATCATCAAGCACGCCATGGAGATC  Raphanus raphanistrum subsp. landra
EX751214       <-- ACGGAAAGAAATTGATGGCTGTGAGAATCATCAAGCACGCCATGGAGATC  Raphanus raphanistrum subsp. maritimus
EY896419       <-- ACGGAAAGAAATTGATGGCTGTGAGAATCATCAAGCACGCCATGGAGATC  Raphanus raphanistrum subsp. maritimus
EV531156       <-- ACGGAAAGAAATTGATGGCTGTGAGAATCATCAAGCACGCCATGGAGATC  Raphanus raphanistrum subsp. maritimus
EX909603       <-- ACGGAAAGAAATTGATGGCGGTGAGAATCATCAAGCACGCCATGGAGATC  Raphanus sativus cv Rat-Tail Radish #3870
EX767267       <-- ACGGAAAGAAATTGATGGCGGTGAGAATCATCAAGCACGCCATGGAGATC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX901464       <-- ACGGAAAGAAATTGATGGCTGTGAGGATCATCAAGCACGCCATGGAGATC  Raphanus sativus cv Early Scarlet Globe
EX905956       --> ACGGAAAGAAATTGATGGCGGTGAGAATCATCAAGCACGCCATGGAGATC  Raphanus sativus cv Rat-Tail Radish #3870
EV570189       --> ACGGAAAGAAATTGATGGCTGTGAGAATCATCAAGCACGCCATGGAGATC  Raphanus raphanistrum subsp. landra
EX746912       --> ACGGAAAGAAATTGATGGCTGTGAGAATCATCAAGCACGCCATGGAGATC  Raphanus raphanistrum subsp. maritimus
EV526754       --> ACGGAAAGAAATTGATGGCTGTGAGAATCATCAAGCACGCCATGGAGATC  Raphanus raphanistrum subsp. maritimus
EY901010       --> ACGGAAAGAAATTGATGGCTGTGAGAATCATCAAGCACGCCATGGAGATC  Raphanus raphanistrum subsp. maritimus
EY913845       --> ACGGAAAGAAATTGATGGCGGTGAGAATCATCAAGCACGCCATGGAGATC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW733578       --> ACGGAAAGAAATTGATGGCTGTGAGAATCATCAAGCACGCCATGGAGATC  Raphanus sativus cv Rat-Tail Radish #3870
FY449551       --> ACGGAAAGAAATTGATGGCTGTGAGAATCATCAAGCACGCCATGGAGATC  Raphanus sativus cv GSK3-1
EY897363       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               401    -    451
UN19575        --> ATCCACCTCTTGACCGACGCCAACCCTATCCAGGTCATCATCGATGCCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574546       <-- ATCCACCTCTTGACCGACGCCAACCCTATCCAGGTCATCATCGATGCCAT
EX751214       <-- ATCCACCTCTTGACCGACGCCAACCCTATCCAGGTCATCATCGATGCCAT
EY896419       <-- ATCCACCTCTTGACCGACGCCAACCCTATCCAGGTCATCATCGATGCCAT
EV531156       <-- ATCCACCTCTTGACCGACGCCAACCCTATCCAGGTCATCATCGATGCCAT
EX909603       <-- ATCCACCTCTTGACCGACGCCAACCCTATCCAGGTCATCATCGATGCCAT
EX767267       <-- ATCCACCTCTTGACCGACGCCAACCCTATCCAGGTCATCATCGATGCCAT
EX901464       <-- ACCCACCTCTTGACCGACGCGAACCCTATCCAGGTTATCATCGATGCCAT
EX905956       --> ATCCACCTCTTGACCGACGCCAACCCTATCCAGGTCATCATCGATGCCAT
EV570189       --> ATCCACCTCTTGACCGACGCCAACCCTATCCAGGTCATCATCGATGCCAT
EX746912       --> ATCCACCTCTTGACCGACGCCAACCCTATCCAGGTCATCATCGATGCCAT
EV526754       --> ATCCACCTCTTGACCGACGCCAACCCTATCCAGGTCATCATCGATGCCAT
EY901010       --> ATCCACCTCTTGACCGACGCCAACCCTATCCAGGTCATCATCGATGCCAT
EY913845       --> ATCCACCTCTTGACCGACGCCAACCCTATCCAGGTCATCATCGATGCCAT
EW733578       --> ATCCACCTCTTGACCGACGCCAACCCTATCCAGGTCATCATCGATGCCAT
FY449551       --> ATCCATCTCTTGACCGACGCGAACCCTATCCAGGTCATCATCGATGCCAT
EY897363       --> ..................................................

               451    -    501
UN19575        --> TGTCAACAGTGGTCCACGTGAAGATGCCACGAGAATTGGATCTGCTGGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574546       <-- TGTCAACAGTGGTCCACGTGAAGATGCCACGAGAATTGGATCTGCTGGTG  Raphanus raphanistrum subsp. landra
EX751214       <-- TGTCAACAGTGGTCCACGTGAAGATGCCACGAGAATTGGATCTGCTGGTG  Raphanus raphanistrum subsp. maritimus
EY896419       <-- TGTCAACAGTGGTCCACGTGAAGATGCCACGAGAATTGGATCTGCTGGTG  Raphanus raphanistrum subsp. maritimus
EV531156       <-- TGTCAACAGTGGTCCACGTGAAGATGCCACGAGAATTGGATCTGCTGGTG  Raphanus raphanistrum subsp. maritimus
EX909603       <-- TGTCAACAGTGGTCCACGTGAAGATGCCACAAGAATTGGATCTGCTGGTG  Raphanus sativus cv Rat-Tail Radish #3870
EX767267       <-- TGTCAACAGTGGTCCACGTGAAGATGCCACAAGAATTGGATCTGCTGGTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX901464       <-- TGTCAACAGTGGTCCACGTGAAGATGCCACGAGAATTGGATCTGCTGGTG  Raphanus sativus cv Early Scarlet Globe
EX905956       --> TGTCAACAGTGGTCCACGTGAAGATGCCACAAGAATTGGATCTGCTGGTG  Raphanus sativus cv Rat-Tail Radish #3870
EV570189       --> TGTCAACAGTGGTCCACGTGAAGATGCCACGAGAATTGGATCTGCTGGTG  Raphanus raphanistrum subsp. landra
EX746912       --> TGTCAACAGTGGTCCACGTGAAGATGCCACGAGAATTGGATCTGCTGGTG  Raphanus raphanistrum subsp. maritimus
EV526754       --> TGTCAACAGTGGTCCACGTGAAGATGCCACGAGAATTGGATCTGCTGGTG  Raphanus raphanistrum subsp. maritimus
EY901010       --> TGTCAACAGTGGTCCACGTGAAGATGCCACGAGAATTGGATCTGCTGGTG  Raphanus raphanistrum subsp. maritimus
EY913845       --> TGTCAACAGTGGTCCACGTGAAGATGCCACAAGAATTGGATCTGCTGGTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW733578       --> TGTCAACAGTGGTCCACGTGAAGATGCCACGAGAATTGGATCTGCTGGTG  Raphanus sativus cv Rat-Tail Radish #3870
FY449551       --> TGTCAACAGTGGTCCACGTGAAGATGCCACGAGAATTGGATCTGCTGGTG  Raphanus sativus cv GSK3-1
EY897363       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               501    -    551
UN19575        --> TTGTGAGGAGACAAGCGGTTGATATCTCCCCTCTAAGACGTGTGAACCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574546       <-- TTGTGAGGAGACAAGCGGTTGATATCTCCCCTCTAAGACGTGTGAACCAA  Raphanus raphanistrum subsp. landra
EX751214       <-- TTGTGAGGAGACAAGCGGTTGATATCTCCCCTCTAAGACGTGTGAACCAA  Raphanus raphanistrum subsp. maritimus
EY896419       <-- TTGTGAGGAGACAAGCGGTTGATATCTCCCCTCTAAGACGTGTGAACCAA  Raphanus raphanistrum subsp. maritimus
EV531156       <-- TTGTGAGGAGACAAGCGGTTGATATCTCCCCTCTAAGACGTGTGAACCAA  Raphanus raphanistrum subsp. maritimus
EX909603       <-- TTGTGAGGAGACAAGCGGTTGATATCTCCCCTCTGAGACGTGTGAACCAA  Raphanus sativus cv Rat-Tail Radish #3870
EX767267       <-- CTGTGAGGAGACAAGCGGTTGATATCTCCCCTCTGAGACGTGTGAACCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX901464       <-- TTGTGAGGAGACAAGCTGTTGATATCTCCCCTTTAAGACGTGTAAACCAA  Raphanus sativus cv Early Scarlet Globe
EX905956       --> TTGTGAGGAGACAAGCGGTTGATATCTCCCCTCTGAGACGTGTGAACCAA  Raphanus sativus cv Rat-Tail Radish #3870
EV570189       --> TTGTGAGGAGACAAGCGGTTGATATCTCCCCTCTAAGACGTGTGAACCAA  Raphanus raphanistrum subsp. landra
EX746912       --> TTGTGAGGAGACAAGCGGTTGATATCTCCCCTCTAAGACGTGTGAACCAA  Raphanus raphanistrum subsp. maritimus
EV526754       --> TTGTGAGGAGACAAGCGGTTGATATCTCCCCTCTAAGACGTGTGAACCAA  Raphanus raphanistrum subsp. maritimus
EY901010       --> TTGTGAGGAGACAAGCGGTTGATATCTCCCCTCTAAGACGTGTGAACCAA  Raphanus raphanistrum subsp. maritimus
EY913845       --> TTGTGAGGAGACAAGCGGTTGATATCTCCCCTCTGAGACGTGTGAACCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW733578       --> TTGTGAGGAGACAAGCGGTTGATATCTCCCCTCTAAGACGTGTGAACCAA  Raphanus sativus cv Rat-Tail Radish #3870
FY449551       --> TTGTGAGGAGACAGGCGGTTGATATCTCCCCTCTAAGACGTGTGAACCAA  Raphanus sativus cv GSK3-1
EY897363       --> ........................gCTCCCCTCTAAGACGTGTGAACCAA  Raphanus raphanistrum subsp. maritimus

               551    -    601
UN19575        --> GCTATCTTCCTTCTTACCACCGGTGCTCGTGAGGCTGCTTTCAGAAACAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574546       <-- GCTATCTTCCTTCTTACCACCGGTGCTCGTGAGGCTGCTTTCAGAAACAT  Raphanus raphanistrum subsp. landra
EX751214       <-- GCTATCTTCCTTCTTACCACCGGTGCTCGTGAGGCTGCTTTCAGAAACAT  Raphanus raphanistrum subsp. maritimus
EY896419       <-- GCTATCTTCCTTCTTACCACCGGTGCTCGTGAGGCTGCTTTCAGAAACAT  Raphanus raphanistrum subsp. maritimus
EV531156       <-- GCTATCTTCCTTCTTACCACCGGTGCTCGTGAGGCTGCTTTCAGAAACAT  Raphanus raphanistrum subsp. maritimus
EX909603       <-- GCTATCTTCTTGCTTACCACCGGTGCTCGTGAGGCTGCTTTCAGAAACAT  Raphanus sativus cv Rat-Tail Radish #3870
EX767267       <-- GCTATCTTCTTGCTTACCACCGGTGCTCGTGAGGCTGCTTTCAGAAACAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX901464       <-- GCTATTTTCTTGCTTACCACCGGTGCTCGTGAGGCTGCTTTCAGAAACAT  Raphanus sativus cv Early Scarlet Globe
EX905956       --> GCTATCTTCTTGCTTACCACCGGTGCTCGTGAGGCTGCTTTCAGAAACAT  Raphanus sativus cv Rat-Tail Radish #3870
EV570189       --> GCTATCTTCCTTCTTACCACCGGTGCTCGTGAGGCTGCTTTCAGAAACAT  Raphanus raphanistrum subsp. landra
EX746912       --> GCTATCTTCCTTCTTACCACCGGTGCTCGTGAGGCTGCTTTCAGAAACAT  Raphanus raphanistrum subsp. maritimus
EV526754       --> GCTATCTTCCTTCTTACCACCGGTGCTCGTGAGGCTGCTTTCAGAAACAT  Raphanus raphanistrum subsp. maritimus
EY901010       --> GCTATCTTCCTTCTTACCACCGGTGCTCGTGAGGCTGCTTTCAGAAACAT  Raphanus raphanistrum subsp. maritimus
EY913845       --> GCTATCTTCTTGCTTACCACCGGTGCTCGTGAGGCTGCTTTCAGAAACAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW733578       --> GCTATCTTCCTTCTTACCACCGGTGCTCGTGAGGCTGCTTTCAGAAACAT  Raphanus sativus cv Rat-Tail Radish #3870
FY449551       --> GCTATCTTCTTGCTTACCACCGGTGCTCGTGAGGCTGCTTTTAGGAACAT  Raphanus sativus cv GSK3-1
EY897363       --> GCTATCTTCCTTCTTACCACCGGTGCTCGTGAGGCTGCTTTCAGAAACAT  Raphanus raphanistrum subsp. maritimus

               601    -    651
UN19575        --> CAAGACAATTGCCGAGTGCCTTGCTGATGAATTGATCAACGCTGCCAAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574546       <-- CAAGACAATTGCCGAGTGCCTTGCTGATGAATTGATCAACGCTGCCAAGG
EX751214       <-- CAAGACAATTGCCGAGTGCCTTGCTGATGAATTGATCAACGCTGCCAAGG
EY896419       <-- CAAGACAATTGCCGAGTGCCTTGCTGATGAATTGATCAACGCTGCCAAGG
EV531156       <-- CAAGACAATTGCCGAGTGCCTTGCTGATGAATTGATCAACGCTGCCAAGG
EX909603       <-- CAAGACAATTGCCGAGTGCCTTGCTGATGAATTGATCAACGCTACCAAGG
EX767267       <-- CAAGACAATTGCCGAGTGCCTTGCTGATGAATTGATCAACGCTGCCAAGG
EX901464       <-- CAAGACAATTGCCGAGTGCCTTGCTGATGAATTGATCAACGCTGCCAAGG
EX905956       --> CAAGACAATTGCCGAGTGCCTTGCTGATGA....................
EV570189       --> CAAGACAATTGCCGAGTGCCTTGCTGATGAATTGATCAACGCTGCCAAGG
EX746912       --> CAAGACAATTGCCGAGTGCCTTGCTGATGAATTGATCAACGCTGCCAAGG
EV526754       --> CAAGACAATTGCCGAGTGCCTTGCTGATGAATTGATCAACGCTGCCAAGG
EY901010       --> CAAGACAATTGCCGAGTGCCTTGCTGATGAATTGATCAACGCTGCCAAGG
EY913845       --> CAAGACAATTGCCGAGTGCCTTGCTGATGAATTGATCAACGCTGCCAAGG
EW733578       --> CAAGACAATTGCCGAGTGCCTTGCTGATGAATTGATCAACGCTGCCAAGG
FY449551       --> CAAGACTATTGCCGAGTGCCTTGCTGATGAATTGATCAACGCTGCCAAGG
EY897363       --> CAAGACAATTGCCGAGTGCCTTGCTGATGAATTGATCAACGCTGCCAAGG

               651    -    701
UN19575        --> GCTCCTCCAACAGCTATGCCATCAAGAAGAAGGATGAGATTGAAAGAGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574546       <-- GCTCCTCCAACAGCTATGCCATCAAGAAGAAGGATGAGATTGAAAGAGTT
EX751214       <-- GCTCCTCCAGCAGCTATGCCATCAAGAAGAAGGATGAGATTGAAAGAGTT
EY896419       <-- GCTCCTCCAACAGCTATGCCATCAAGAAGAAGGATGAGATTGAAAGAGTT
EV531156       <-- GCTCCTCCAACAGCTATGCCATCAAGAAGAAGGATGAGATTGAAAGAGTT
EX909603       <-- GCTCCTCCAACAGCTATGCCATCAAGAAGAAGGATGAGATTGAAAGAGTT
EX767267       <-- GCTCCTCCAACAGCTATGCCATCAAGAAGAAGGATGAGATTGAAAGAGTT
EX901464       <-- GCTCCTCCAACAGCTATGCCATCAAGAAGAAGGATGAGATTGAAAGAGTT
EX905956       --> ..................................................
EV570189       --> GCTCCTCCAACAGCTATGCCATCAAGAAGAAG-ATGAGATTGAAAGAGTT
EX746912       --> GCTCCTCCAGCAGCTATGCCATCAAGAAGAAG-ATGAGATTGAAAGAGTT
EV526754       --> GCTCCTCCAACAGCTATGCCATCAAGAAGAAGGATGAGATTGAAAGAGTT
EY901010       --> GCTCCTCCAACAGCTATGCCATC...........................
EY913845       --> GCTCCTCCAACAGCTATGCCATCAAGAAGAAAGATGAGATTGAAAGAGTT
EW733578       --> GCTCCTCCAACAGCTATGCCATCAAGAAGAAGGATGAGATTGAAAGAGTT
FY449551       --> GCTCCTCCAACAGCTATGCCATCAAGAAGAAGGATGAGATTGAAAGAGTT
EY897363       --> GCTCCTCCAACAGCTATGCCATCAAGAAGAAGGATGAGATTGAAAGAGTT

               701    -    751
UN19575        --> GCCAAGGCCAATCGTTAAGGATGTTCCTGG-TGGTGTCCTGAGTGTTACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574546       <-- GCCAAGGCCAATCGTTAAGGATGTTCCTGG-TGGTGTCCTGAGTGTTACA
EX751214       <-- GCCAAGGCCAATCGTTAAGGATGTTCCTGG-TGGCGTCCTGAGTGTTACA
EY896419       <-- GCCAAGGCCAATCGTTAAGGATGTTCCTGG-TGGTGTCCTGAGTGTTACA
EV531156       <-- GCCAAGGCCAATCGTTAAGGATGTTCCTAG-TGGTGTCCTGAGTGTTGCA
EX909603       <-- GCCAAGGCCAATCGTTAAGGATGTTCCTGG-TGGTGTCCTGAGTGTTACA
EX767267       <-- GCCAAGGCCAATCGTTAAGGATGTTCCTGG-TGGTGTCCTGAGTGTTACA
EX901464       <-- GCCAAGGCCAATCGGTAAGGATGTTCCTGG-TGGTGTCCTGAGTGTTACA
EX905956       --> ..................................................
EV570189       --> GCCAAGGCCAATCGTTAAGGATGTTCCTGG-TGGTGTCCTGAGTGTTACA
EX746912       --> GCCAAGGCCA-TCGTTAAG-ATG-TCCTGGGTGGCGTCCTGAGTGTTA..
EV526754       --> GC................................................
EY901010       --> ..................................................
EY913845       --> GCCAAG-CCAATCGTTAAG-ATGTTCCTGG-TGGTGTCCTGAGTGT-AC-
EW733578       --> GCCAAGGCCAATCGTTAAG-ATGTTCCTGG-TGGTGTCCTGAGTGTTACA
FY449551       --> GCCAAGGCCAATCGTTAAGGATGTTCCTGG-TGGTGTCCTGAGTGTTACA
EY897363       --> GCCAAGGCCAATCGTTAAGGATGTTCCTGG-TGGTGTCCTGAGTGTTACA

               751    -    801
UN19575        --> ATCTTATCAATGAAGTTATTGTTTTCTTTATCGGTAGATTGGATGGAATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574546       <-- ATCTTATCAATGAAGTTATTGTTTTCTTTATCGGTAGATTGGATGGAATA
EX751214       <-- ATCTTATCA-TGAAGTTATTGTTTTCTTTATCGGTAGATTGGATGGAATA
EY896419       <-- ATCTTATCAATGAAGTTATTGTTTTCTTTATCGGTAGATTGGATGGAATA
EV531156       <-- ATCTTATCAATGAAGTTATTGTTTTCTTTATCGGTAGATTGGATGGAATA
EX909603       <-- ATCTTATCAATGAAGTTATTGTTTTCTTTATCGGTAGATTGGATGGAATA
EX767267       <-- ATCTTATCAATGAAGTTATTGTTTTCTTTATCGGTAGATTGGATGGAATA
EX901464       <-- ATCTTATCAGTGAAGTTATTGTTTTCTTTATCGGTAGATTGGATGGAATA
EX905956       --> ..................................................
EV570189       --> ATCTTATCAATGAAGTTATTGTTTTCTTTATCGGTAGATTGGATGGGATA
EX746912       --> ..................................................
EV526754       --> ..................................................
EY901010       --> ..................................................
EY913845       --> ATCTTATCA-TGAAGTTATTG.............................
EW733578       --> ATCTTATCA-TGAAGTTATTGTTTTCTTTATCGGTAGATTGGATGGAATA
FY449551       --> ATCTTATCAATGAAGTTATTGTTTTCTTTATCGGTAGATTGGATGGAATA
EY897363       --> ATCTTATCAATGAAGTTATTGTTTTCTTTATCGGTAGATTGGATGGAATA

               801    -    851
UN19575        --> TGTTTAAGATGTTTTACTCTGTTGTTTTATGAAAATTTGATTTCGTCTA-
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574546       <-- TGTTTAAGATGTTTTACTCTGTTGTTTTATGAAAATTTGATTTCGTCTA-
EX751214       <-- TGTTTAAGATGTTTTACTCTGTTGTTTTATGAAAATTTGATTTCGTCTA-
EY896419       <-- TGTTTAAGATGTTTTACTCTGTTGTTTTATGAAAATTTGATTTCGTCc..
EV531156       <-- TGCTTAAGATGTTTTACTCTGTTGTTTTATGAAAATTTGATTTCGTCTA-
EX909603       <-- TGTTTAAGATGTTTTACTCTGTTGTTTTATGAAAATTTGATTTCGTCTAA
EX767267       <-- TGTTTAAGATGTTTTACTCTGTTGTTTTATGAAAATTTGATTTCGTCTAA
EX901464       <-- TGTTTAAGATGTTTTACTCTGTTGTTTTATGAAAATTTGATTTCGTCc..
EX905956       --> ..................................................
EV570189       --> TGTTTAAGATGTTTTACTCTGTTGTTTTATGAAAATTTGATTTCGTCTA-
EX746912       --> ..................................................
EV526754       --> ..................................................
EY901010       --> ..................................................
EY913845       --> ..................................................
EW733578       --> TGTTTAAGATGT......................................
FY449551       --> TGTTTAAGATGTTTTACTCTGTTGTTTTATGAAAATTTGATTTCGTCTA-
EY897363       --> TGTTTAAGATGTTTTACTCTGTTGTTTTATGAAAATTTGATTTCGTCTA-

               851    -    901
UN19575        --> GACTTTTGAATAGATAAATTTTGAA-TGCTTAAATGAAGAAATCTAAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574546       <-- GACTTTTGAATAGATAAATTTTGAA-TGCTTAAATGAAGAAATCTAAAGA
EX751214       <-- GACTTTTGAATAGATAAATTTTGAA-TGCT....................
EY896419       <-- ..................................................
EV531156       <-- GACTTTTGAATAGATAAATTTTGAA-TGCTTAAATGAAGAAATCTAAAGA
EX909603       <-- GACTTT-GAATAGATAAATTTTGAA-TGCTTAAATGAAGAAATCTAAAGA
EX767267       <-- GACTTT-GAATAGATAAATTTTGAA-TGCTTAAATGAAGAAATCT.....
EX901464       <-- ..................................................
EX905956       --> ..................................................
EV570189       --> GACTTTTGAAAAGATAAATTTTGAA.........................
EX746912       --> ..................................................
EV526754       --> ..................................................
EY901010       --> ..................................................
EY913845       --> ..................................................
EW733578       --> ..................................................
FY449551       --> GACTTT-GAATAGATAAATTTTGAAATGCTT...................
EY897363       --> GACTTTTGAATAGATAAATTTTGAA-TGCTTAAATGAAGAAATCT.....

               901    -    951
UN19575        --> GTTTGTTTTTGTCG
                   ~~~~~~~~~~~~~~
EV574546       <-- GTTTGTTTTTGTCG
EX751214       <-- ..............
EY896419       <-- ..............
EV531156       <-- GTTTGTTTTTGTCG
EX909603       <-- GTTTGTTTTTGTC.
EX767267       <-- ..............
EX901464       <-- ..............
EX905956       --> ..............
EV570189       --> ..............
EX746912       --> ..............
EV526754       --> ..............
EY901010       --> ..............
EY913845       --> ..............
EW733578       --> ..............
FY449551       --> ..............
EY897363       --> ..............