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Alignment for radish unigene UN19580

               1      -     51
UN19580        --> GGGGAAGAAAATTAAAGGATAAGAACTTTGAAGTTAGAGAAGCAGTTTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV572324       <-- ..................................................
FD546807       <-- ..................................................
FD974873       <-- ..................................................
EV571171       <-- ..................................................
FD978680       --> GGGGAAGAAAATTAAAGGATAAGAACTTTGAAGTTAGAGAAGCAGTTTAC
EV547937       --> ..................................................
EV565936       --> ..................................................
EV567364       --> ..................................................
FD550902       --> ..................................................

               51     -    101
UN19580        --> ATCAATGGCAGCTCGTAGAGTGTCTTCTCTACTATCTCGATCCTTTCCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV572324       <-- ..................................................
FD546807       <-- ..................................................
FD974873       <-- ..................................................
EV571171       <-- ..................................................
FD978680       --> ATCAATGGCAGCTCGTAGAGTGTCTTCTCTACTATCTCGATCCTTTCCAG
EV547937       --> ..................................................
EV565936       --> ..................................................
EV567364       --> ..................................................
FD550902       --> ..................................................

               101    -    151
UN19580        --> CTTCCTCTCCCTTTCTATTTCGTTCTCAAGGGAGAAACTGTTGTAATGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV572324       <-- ..................................................
FD546807       <-- ..................................................
FD974873       <-- ..................................................
EV571171       <-- ..................................................
FD978680       --> CTTCCTCTCCCTTTCTATTTCGTTCTCAAGGGAGAAACTGTTGTAATGGA
EV547937       --> ..................................................
EV565936       --> ..................................................
EV567364       --> ..................................................
FD550902       --> ..................................................

               151    -    201
UN19580        --> AGTAGTAGGGTCGGAAGGAGATTTGGAACCTCTTCTGCAGCTGAAGATAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV572324       <-- ..................................................
FD546807       <-- ..................................................
FD974873       <-- ..................................................
EV571171       <-- ..................................................
FD978680       --> AGTAGTAGGGTCGGAAGGAGATTTGGAACCTCTTCTGCAGCTGAAGATAT
EV547937       --> ..................................................
EV565936       --> ..................................................
EV567364       --> ..................................................
FD550902       --> ..................................................

               201    -    251
UN19580        --> CATAACCCCCTCGGTTCAAGTGTCTTACACACAGCTCCTAATCGATGGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV572324       <-- ..................................................
FD546807       <-- ..................................................
FD974873       <-- ..................................................
EV571171       <-- ..................................................
FD978680       --> CATAACCCCCTCGGTTCAAGTGTCTTACACACAGCTCCTAATCGATGGGA
EV547937       --> ..................................................
EV565936       --> ..................................................
EV567364       --> ..................................................
FD550902       --> ..................................................

               251    -    301
UN19580        --> ACTTCGTAGACGCTGCTTCTGGTAAGACGTTCCCAACTCTTGATCCACGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV572324       <-- ..................................................
FD546807       <-- ..................................................
FD974873       <-- ..................................................
EV571171       <-- ..................................................
FD978680       --> ACTTCGTAGACGCTGCTTCTGGTAAGACGTTCCCAACTCTTGATCCACGC
EV547937       --> ..................................................
EV565936       --> ..................................................
EV567364       --> ..................................................
FD550902       --> ..................................................

               301    -    351
UN19580        --> ACAGGGGAGGTCATCGCAAATGTAGCTGAAGGAGATGCTGAAGATATCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV572324       <-- ..................................................
FD546807       <-- ..................................................
FD974873       <-- ..................................................
EV571171       <-- ..................................................
FD978680       --> ACAGGGGAGGTCATCGCAAATGTAGCTGAAGGAGATGCTGAAGATATCAA
EV547937       --> ..................................................
EV565936       --> ..................................................
EV567364       --> ..................................................
FD550902       --> ..................................................

               351    -    401
UN19580        --> CCGGGCGGTGAAAGCTGCCAGGAAGGCCTTTGATGGAGGACCATGGCCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV572324       <-- ..................................................
FD546807       <-- ..................................................
FD974873       <-- ..................................................
EV571171       <-- ..................................................
FD978680       --> CCGGGCGGTGAAAGCTGCCAGGAAGGCCTTTGATGAAGGACCATGGCCTA
EV547937       --> ..........................CCTTTGATGGAGGACCATGGCCTA
EV565936       --> ..................................................
EV567364       --> ..................................................
FD550902       --> ..................................................

               401    -    451
UN19580        --> AGATGACTGCTTATGAGAGGTCAAGGATAATGCTGAGATTCGCAGATTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV572324       <-- ..................................................
FD546807       <-- ..................................................
FD974873       <-- ..................................................
EV571171       <-- ..................................................
FD978680       --> AGATGACTGCTTATGAGAGGTCAAGGATAATGCTGAGATTCGCAGATTTG
EV547937       --> AGATGACTGCTTATGAGAGGTCAAGGATAATGCTGAGATTCGCAGATTTG
EV565936       --> ..................................................
EV567364       --> ..................................................
FD550902       --> ..................................................

               451    -    501
UN19580        --> GTTGAGAAACACAGCGAAGAGCTAGCTGCTTTAGAGACATGGGACAATGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV572324       <-- ..................................................
FD546807       <-- ..................................................
FD974873       <-- ..................................................
EV571171       <-- ..................................................
FD978680       --> GTTGAGAAACACAGCGAAGAGCTAGCTGCTTTAGAGACATGGGACAATGG
EV547937       --> GTTGAGAAACACAGCGAAGAGCTAGCTGCTTTAGAGACATGGGACAATGG
EV565936       --> ..................................................
EV567364       --> ..................................................
FD550902       --> ..................................................

               501    -    551
UN19580        --> GGAGACTTATCAACAAGCCAAAACAGCTGAGATTCCAATGCTCGCCAGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV572324       <-- ..................................................
FD546807       <-- ..................................................
FD974873       <-- ..................................................
EV571171       <-- ..................................................
FD978680       --> GGAGACTTATCAACAAGCCAAAACAGCTGAGATTCCAATGCTCGCCAGAT
EV547937       --> GAAGACTTATCAACAAGCCAAAACAGCTGAGATTCCAATGCTCGCCAGAT
EV565936       --> ..................................................
EV567364       --> ..................................................
FD550902       --> ..................................................

               551    -    601
UN19580        --> TGTTTCGCTACTATGCTGGATGGGCGGATAAGATTCATGGGCTCACAGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV572324       <-- ..................................................
FD546807       <-- ..................................................
FD974873       <-- ..................................................
EV571171       <-- ..................................................
FD978680       --> TGTTTCGCTACTATGCTGGATGGGCGGATAAGATTCATGGGCTCACAGTT
EV547937       --> TGTTTCGCTACTATGCTGGATGGGCGGATAAGATTCATGGGCTCACAGTT
EV565936       --> ..................................................
EV567364       --> ..................................................
FD550902       --> ..................................................

               601    -    651
UN19580        --> CCAGCTGATGGAAACTATCATGTTCAGACACTGCATGAACCAATAGGCGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV572324       <-- ..................................................
FD546807       <-- ..................................................
FD974873       <-- ..................................................
EV571171       <-- ..................................................
FD978680       --> CCAGCTGATGGAAACTATCATGTTCAGACACTGCATGAACCAATAGGCGT
EV547937       --> CCAGCTGATGGAAACTATCATGTTCAGACACTGCATGAACCAATAGGCGT
EV565936       --> ..................................................
EV567364       --> ..................................................
FD550902       --> ..................................................

               651    -    701
UN19580        --> TGCTGGACAGATCGTCCCGTGGAACTTTCCTCTTTTGATGTTTGCTTGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV572324       <-- ..................................................
FD546807       <-- ..................................................
FD974873       <-- ..................................................
EV571171       <-- ..................................................
FD978680       --> TGCTGGACAGATCGTCCCATGGAACTTTCCTCTTTTGATGTTTGCTTGGA
EV547937       --> TGCTGGACAGATCGTCCCGTGGAACTTTCCTCTTTTGATGTTTGCTTGGA
EV565936       --> ..................................................
EV567364       --> ..................................................
FD550902       --> ..................................................

               701    -    751
UN19580        --> AAGTTGGTCCTGCTCTTGCTTGTGGTAACACCATTGTCCTCAAAACCGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV572324       <-- ..................................................
FD546807       <-- ..................................................
FD974873       <-- ..................................................
EV571171       <-- ..................................................
FD978680       --> AAGTTGGTCCTGCTCTTGCTTGTGGTAACACCATTGTCCTCAAAACgct.
EV547937       --> AAGTTGGTCCTGCTCTTGCTTGTGGTAACACCATTGTCCTCAAAACCGCT
EV565936       --> ..................................................
EV567364       --> ..................................................
FD550902       --> ..................................................

               751    -    801
UN19580        --> GAACAAACTCCTCTCACTGCTTTCTACGTCGGCAAGCTTTTCCTTGAAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV572324       <-- ..................................................
FD546807       <-- ..................................................
FD974873       <-- ..................................................
EV571171       <-- ..................................................
FD978680       --> ..................................................
EV547937       --> GAACAAACTCCTCTCACTGCTTTCTACGTCGGCAAGCTTTTCCTTGAAGC
EV565936       --> ..................................................
EV567364       --> ..................................................
FD550902       --> ..................................................

               801    -    851
UN19580        --> GGGTCTTCCTCCAGGTGTTCTGAATATAGTTTCTGGATTCGGTCCAACCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV572324       <-- ..................................................
FD546807       <-- ..................................................
FD974873       <-- ..................................................
EV571171       <-- ..................................................
FD978680       --> ..................................................
EV547937       --> GGGTCTTCCTCCAGGTGTTCTGAATATAGTTTCTGGATTCGGTCCAACCG
EV565936       --> .......................................gGGTCCAACCG
EV567364       --> .......................................gGGTCCAACCG
FD550902       --> ..................................................

               851    -    901
UN19580        --> CAGGTGCTTCCCTCGCGAGTCACATGGATGTAGACAAGCTTGCTTTCACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV572324       <-- ............................................TTCACA
FD546807       <-- ..................................................
FD974873       <-- ..................................................
EV571171       <-- ..................................................
FD978680       --> ..................................................
EV547937       --> CAGGTGCTCCCCTCGCGAGTCACATGGATGTAGACAAGCTTGCTTTCACA
EV565936       --> CAGGTGCTTCCCTCGCGAGTCACATGGATGTAGACAAGCTTGCTTTCACA
EV567364       --> CAGGTGCTTCCCTCGCGAGTCACATGGATGTAGACAAGCTTGCTTTCACA
FD550902       --> ................................................gA

               901    -    951
UN19580        --> GGATCAACTGATACGGGCAAAGTTGTACTGGGTCTAGCTGCTAACAGCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV572324       <-- GGATCAACTGATACGGGCAAAGTTGTACTGGGTCTAGCTGCTAACAGCAA
FD546807       <-- ..................................................
FD974873       <-- ..................................................
EV571171       <-- ..................................................
FD978680       --> ..................................................
EV547937       --> GGATCAACTGATACGGGCAAAGTTATACTTGGACTGGCTGCTAACAGCAA
EV565936       --> GGATCAACTGATACGGGCAAAGTTGTACTGGGTCTAGCTGCTAACAGCAA
EV567364       --> GGATCAACTGATACGGGCAAAGTTGTACTGGGTCTAGCTGCTAACAGCAA
FD550902       --> GGATCAACTGATACGGGCAAAGTTATACTTGGACTGGCTGCTAACAGCAA

               951    -   1001
UN19580        --> TCTCAAGCCAGTGACACTAGAACTTGGAGGGAAATCACCATTCATCGTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV572324       <-- TCTCAAGCCAGTGACACTAGAACTTGGAGGGAAATCACCATTCATCGTAT
FD546807       <-- ..................................................
FD974873       <-- ..................................................
EV571171       <-- ..................................................
FD978680       --> ..................................................
EV547937       --> TCTCAAGCCAGTGACACTAGAACTTGGAGGGAAATCACCATTCATCGTAT
EV565936       --> TCTCAAGCCAGTGACACTAGAACTTGGAGGGAAATCACCATTCATCGTAT
EV567364       --> TCTCAAGCCAGTGACACTAGAACTTGGAGGGAAATCACCATTCATCGTAT
FD550902       --> TCTCAAGCCAGTGGCACCAGAACTTGGAGGGAAATCACCATTCATCGTAT

               1001   -   1051
UN19580        --> TCGAAGATGCAGATATCAATAAAGCTGTAGAGCTTGCACACTTTGCTCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV572324       <-- TCGAAGATGCAGATATCAATAAAGCTGTAGAGCTTGCACACTTTGCTCTC
FD546807       <-- .....................................ACACTTTGCTCTC
FD974873       <-- ..................................................
EV571171       <-- ..................................................
FD978680       --> ..................................................
EV547937       --> TCGAAGATGCAGATATCAATAAAGCTGTAGAGCTTGCACACTTTGCTCTC
EV565936       --> TCGAAGATGCAGATATCAATAAAGCTGTAGAGCTTGCACACTTTGCTCTC
EV567364       --> TCGAAGATGCAGATATCAATAAAGCTGTAGAGCTTGCACACTTTGCTCTC
FD550902       --> TCGAAGATGCAGATATCAATAAAGCTGTAGAGCTTGCACACTTTGCTCTC

               1051   -   1101
UN19580        --> TTCTTTAACCAGGGGCAATGTTGCTGCGCTGGGTCTCGGACATATGTTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV572324       <-- TTCTTTAACCAGGGGCAATGTTGCTGCGCTGGGTCTCGGACATATGTTCA  Raphanus raphanistrum subsp. landra
FD546807       <-- TTCTTTAACCAGGGGCAATGTTGCTGCGCTGGGTCTCGGACATATGTTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD974873       <-- ..............GCAATGTTGCTGCGCTGGGTCTCGGACATATGTTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV571171       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD978680       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV547937       --> TTCTTTAACCAGGGGCAATGTTGCTGCGCTGGGTCTCGGACATATGTTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV565936       --> TTCTTTAACCAGGGGCAATGTTGCTGCGCTGGGTCTCGGACATATGTTCA  Raphanus raphanistrum subsp. landra
EV567364       --> TTCTTTAACCAGGGGCAATGTTGCTGCGCTGGGTCTCGGACATATGTTCA  Raphanus raphanistrum subsp. landra
FD550902       --> TTCTTTAACCAGGGGCAATGTTGCTGCGCTGGGTCTCGGACATATGTTCA  Raphanus raphanistrum subsp. raphanistrum (NY)

               1101   -   1151
UN19580        --> TGAGAAAGTGTACGATGAGTTTGTTGAGAAAGCAAAGGCACGCGCATTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV572324       <-- CGAGAAAGTGTACGATGAGTTTGTTGAGAAAGCAAAGGCACGCGCATTGA  Raphanus raphanistrum subsp. landra
FD546807       <-- TGAGAAAGTGTACGATGAGTTTGTTGAGAAAGCAAAGGCACGCGCATTAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD974873       <-- TGAGAAAGTGTACGATGAGTTTGTTGAGAAAGCAAAGGCACGCGCATTAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV571171       <-- ...............................................tgA  Raphanus raphanistrum subsp. landra
FD978680       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV547937       --> TGAGAAAGCGTACGATGAGTTTGTTGAGAAAGCAAAG-CACGCGCATTAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV565936       --> CGAGAAAGTGTACGATGAGTTTGTTGAGAAAGCAAAGGCACGCGCATTGA  Raphanus raphanistrum subsp. landra
EV567364       --> CGAGAAAGTGTACGATGAGTTTGTTGAGAAAGCAAAGGCACGCGCATTGA  Raphanus raphanistrum subsp. landra
FD550902       --> TGAGAAAGTGTACGATGAGTTTGTTGAGAAAGCAAAGGCACGCGCATTAA  Raphanus raphanistrum subsp. raphanistrum (NY)

               1151   -   1201
UN19580        --> AACGTGTGGTTGGTGATCCTTTCAAGAAAGGCATTGAACAGGGTCCTCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV572324       <-- AACGTGTGGTTGGTGATCCTTTCAAGAAAGGCATTGAACAGGGTCCTCAG
FD546807       <-- AACGTGTGGTTGGCGATCCTTTCAAGAAAGGCACTGAACAGGGTCC-CAG
FD974873       <-- AACGTGTGGTTGGTGATCCTTTCAAGAAAGGCACTGAACAGGGTCCTCAG
EV571171       <-- AACGTGTGGTTGGTGATCCTTTCAAGAAAGGCATTGAACAGGGTCCTCAG
FD978680       --> ..................................................
EV547937       --> ACCGTGTGGTTGGTGATCCTTTCAg.........................
EV565936       --> AACGTGTGGTTGGTGATCCTTTCAAGAAAGGCATTGAACAGGGTCCTCAG
EV567364       --> AACGTGTGGTTGGTGATCCTTTCAAGAAAGGCATTGAACAGGGTCCTCAG
FD550902       --> AACGTGTGGTTGGCGATCCT..............................

               1201   -   1251
UN19580        --> ATTGATTCGAAGCAATTCGAGAAAGTGATGAGGTACATAAGGTCAGGTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV572324       <-- ATTGATTCGAAGCAATTCGAGAAAGTGATGAGGTACATAAGGTCAGGTGT
FD546807       <-- ATTGATTCGAAGCAATTCGAGAAAGTGATGAGGTACATAAGGTCAGGTGT
FD974873       <-- ATTGATTCGAAGCAATTCGAGAAAGTGATGAGGTACATAAGGTCAGGTGT
EV571171       <-- ATTGATTCGAAGCAATTCGAGAAAGTGATGAGGTACATAAGGTCAGGTGT
FD978680       --> ..................................................
EV547937       --> ..................................................
EV565936       --> ATTGATTCGAAGCAATTCGAGAAAGTGATGAGGTACATAAGGTCAGGTGT
EV567364       --> ATTGATTCGAAGCAATTCGAGAAAGTGATGAGGTACATAAGGTCAGGTGT
FD550902       --> ..................................................

               1251   -   1301
UN19580        --> TGAAAGCAATGCTACTCTTGAATGTGGTGGTGATCAGATTGGTAACAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV572324       <-- TGAAAGCAATGCTACTCTTGAATGTGGTGGTGATCAGATTGGTAACAAAG
FD546807       <-- TGAAAGCAATGCTACTCTTGAATGTGGTGGTGATCAGATTGGTAACAAAG
FD974873       <-- TGAAAGCAATGCTACTCTTGAATGTGGTGGTGATCAGATTGGTAACAAAG
EV571171       <-- TGAAAGCAATGCTACTCTTGAATGTGGTGGTGATCAGATTGGTAACAAAG
FD978680       --> ..................................................
EV547937       --> ..................................................
EV565936       --> TGAAAGCAATGCTACTCTTGAATGTGGTGGTGATCAGATTGGTAACAAAG
EV567364       --> TGAAAGCAATGCTACTCTTGAATGTGGTGGTGATCAGATTGGTAACAAAG
FD550902       --> ..................................................

               1301   -   1351
UN19580        --> GTTACTTCATCCAACCTACAGTCTTTTCTAACGTTAAGGACGATATGCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV572324       <-- GTTACTTCATCCAACCTACAGTCTTTTCTAACGTTAAGGACGATATGCTT
FD546807       <-- GTTACTTCATCCAACCTACAGTCTTTTCTAACGTTAAGGACGATATGCTT
FD974873       <-- GTTACTTCATCCAACCTACAGTCTTTTCTAACGTTAAGGACGATATGCTT
EV571171       <-- GTTACTTCATCCAACCTACAGTCTTTTCTAACGTTAAGGACGATATGCTT
FD978680       --> ..................................................
EV547937       --> ..................................................
EV565936       --> GTTACTTCATCCAACCTACAGTCTTTTCTAACGTTAAGGACGATATGCTT
EV567364       --> GTTACTTCATCCAACCTACAGTCTTTTCTAACGTTAAGGACGATATGCTT
FD550902       --> ..................................................

               1351   -   1401
UN19580        --> ATCGCTCAAGATGAGATTTTCGGTCCGGTCCAATCAATCTTGAAGTTCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV572324       <-- ATCGCTCAAGATGAGATTTTCGGTCCGGTCCAATCAATCTTGAAGTTCAG
FD546807       <-- ATAGCTCAAGATGAGATTTTCGGACCAGTCCAATCAATCTTGAAGTTCAG
FD974873       <-- ATAGCTCAAGATGAGATTTTCGGACCAGTCCAATCAATCTTGAAGTTCAG
EV571171       <-- ATCGCTCAAGATGAGATTTTCGGTCCGGTCCAATCAATCTTGAAGTTCAG
FD978680       --> ..................................................
EV547937       --> ..................................................
EV565936       --> ATCGCTCAAGATGAGATTTTCGGTCCGGTCCAATCAATCTTGAAGTTCAG
EV567364       --> ATCGCTCAAGATGAGATTTTCGGTCCGGTCCAATCAATCTTGAAGTTCAG
FD550902       --> ..................................................

               1401   -   1451
UN19580        --> GGATGTGGATGAGGTGATAAGGAGGGCTAACGAGACGAGGTACGGGCTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV572324       <-- GGATGTGGATGAGGTGATAAGGAGGGCTAACGAGACGAGGTACGGGCTAG
FD546807       <-- GGATGTGGATGAGGTGATAAGGAGGGCTAACGAGACGAGGTACGGGCTAG
FD974873       <-- GGATGTGGATGAGGTGATAAGGAGGGCTAACGAGACGAGGTACGGGCTAG
EV571171       <-- GGATGTGGATGAGGTGATAAGGAGGGCTAACGAGACGAGGTACGGGCTAG
FD978680       --> ..................................................
EV547937       --> ..................................................
EV565936       --> GGATGTGGATGAGGTGATAAGGAGGGCTAACGAGACGAGGTACGGGCTAG
EV567364       --> GGATGTGGATGAGGTGATAAGGAGGGCTAACGAGACGAGGTACGGGCTAG
FD550902       --> ..................................................

               1451   -   1501
UN19580        --> CCGCAGGGGTTTTCACAAAGAGTCTGGACACTGCAAATAGAGTGTCCAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV572324       <-- CCGCAGGGGTTTTCACAAAGAGTCTGGACACTGCAAATAGAGTGTCCAGG
FD546807       <-- CCGCAGGGGTTTTCACAAAGAGTCTGGACACTGCAAATAGGGTGTCGAGG
FD974873       <-- CCGCAGGGGTTTTCACAAAGAGTCTGGACACTGTAAATAGGGTGTCGAGG
EV571171       <-- CCGCAGGGGTTTTCACAAAGAGTCTGGACACTGCAAATAGAGTGTCCAGG
FD978680       --> ..................................................
EV547937       --> ..................................................
EV565936       --> CCGCAGGGGTTTTCACAAAGAGTCTGGACACTGCAAATAGAGTGTCCAGG
EV567364       --> CCGCAGGGGTTTTCACAAAGAGTCTGGACACTGCAAATAGAGTGTCCAGG
FD550902       --> ..................................................

               1501   -   1551
UN19580        --> GCTTTGAAAGCTGGCACTGTTTGGGTTAACTGTTTCGACGTCTTTGACGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV572324       <-- GCTTTGAAAGCTGGCACTGTTTGGGTTAACTGTTTCGACGTCTTTGACGC
FD546807       <-- GCTTTGAAAGCTGGCACTGTTTGGGTTAACTGTTTCGACGTCTTTGACGC
FD974873       <-- GCTTTGAAAGCTGGCACTGTTTGGGTTAACTGTTTCGACGTCTTTGACGC
EV571171       <-- GCTTTGAAAGCTGGCACTGTTTGGGTTAACTGTTTCGACGTCTTTGACGC
FD978680       --> ..................................................
EV547937       --> ..................................................
EV565936       --> GCTTTGAAAGCTGGCACTGTTTGGGTTAACTGTTTCGACGTCTTTGACGC
EV567364       --> GCTTTGAAAGCTGGCACTGTTTGGGTTAACTGTTTCGACGTCTTTGACGC
FD550902       --> ..................................................

               1551   -   1601
UN19580        --> AGCCATTCCCTTTGGTGGTTACAAGATGAGCGGTAATGGTAGAGAGAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV572324       <-- AGCCATTCCCTTTGGTGGTTACAAGATGAGCGGTAATGGTAGAGAGAAAG
FD546807       <-- AGCCATTCCCTTTGGTGGTTACAAGATGAGCGGGAATGGTAGAGAGAAAG
FD974873       <-- AGCCATTCCCTTTGGTGGTTACAAGATGAGCGGGAATGGTAGAGAGAAAG
EV571171       <-- AGCCATTCCCTTTGGTGGTTACAAGATGAGCGGTAATGGTAGAGAGAAAG
FD978680       --> ..................................................
EV547937       --> ..................................................
EV565936       --> AGCCATTCCCTTTGGTGGTTACAAGATGAGCGGTAATGGTAGAGAGAAAG
EV567364       --> AGCCATTCCCTTTGGTGGTTACAAGATGAGCGGTAATGGTAGAGAGAAAG
FD550902       --> ..................................................

               1601   -   1651
UN19580        --> GTATTTACAGTCTCAACAACTACTTGCAGGTCAATGCTGTTGTCACTCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV572324       <-- GTATTTACAGTCTCAACAACTACTTGCAGGTCAATGCTGTTGTCACTCCT
FD546807       <-- GTATTTACAGTCTCAACAACTACTTGCAGGTCAAGGCTGTTGTCACTCCT
FD974873       <-- GTATTTACAGTCTCAACAACTACTTGCAGGTCAAGGCTGTTGTCACTCCT
EV571171       <-- GTATTTACAGTCTCAACAACTACTTGCAGGTCAATGCTGTTGTCACTCCT
FD978680       --> ..................................................
EV547937       --> ..................................................
EV565936       --> GTATTTACAGTCTCAACAACTACTT.........................
EV567364       --> GTATTTACAGTCTCAACAACTACTTGCAG-TCAATGCTGTTGTCACTCCT
FD550902       --> ..................................................

               1651   -   1701
UN19580        --> CTTAATAATCCTGCTTGGATATGATCGCGCTCTAGTTTCTTTAATTATTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV572324       <-- CTTAATAATCCTGCTTGGATATGATCGCGCTCTAGTTTCTTTAATTATTG
FD546807       <-- CTTAATAATCCTGCTTGGATATGATCGCGCTCTAGTTTCTTTAATTATTG
FD974873       <-- CTTAATAATCCTGCTTGGATATGATCGCGCTCTAGTTTCTTTAATTATTG
EV571171       <-- CTTAATAATCCTGCTTGGATATGATCGCGCTCTAGTTTCTTTAATTATTG
FD978680       --> ..................................................
EV547937       --> ..................................................
EV565936       --> ..................................................
EV567364       --> CTTA-TAATCCTGCTTGGATATGATCGCGCTCTAGTTTCTTTA-TTATTG
FD550902       --> ..................................................

               1701   -   1751
UN19580        --> CATAAAAATGCTCATAATAAAAGTTTAAATGATAGTTAGGCAACGGATTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV572324       <-- CATAAAAATGCTCATAATAAAAGTTTAAATGATAGTTAGGCAACGGATTA
FD546807       <-- CATAAAAATGCTCATAATAAAAGTTTAAATGATAGTTAGGCAACGGATTA
FD974873       <-- CATAAAAATGCTCATAATAAAAGTTTAAATGATAGTTAGGCAACGGATTA
EV571171       <-- CATAAAAATGCTCATAATAAAAGTTTAAATGATAGTTAGGCAACGGATTA
FD978680       --> ..................................................
EV547937       --> ..................................................
EV565936       --> ..................................................
EV567364       --> CATAAAA-TGCTCATA-TAA--GTTTAAATGAT.................
FD550902       --> ..................................................

               1751   -   1801
UN19580        --> TGATACTAGCTGTAATAAATGTGTAATCAAGTTCTCAGTTCTCACTGTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV572324       <-- TGATA-TA-CTGTAATAAATGTGTAATCAAGTTCTCAGTTCTCAgt....
FD546807       <-- TGAT----ACTGTAATAAATGTGTAATCAAGTTCTCAGTTCcc.......
FD974873       <-- TGAT----ACTGTAATAAATGTGTAATCAAGTTCTCAGTTCTCACTGTTG
EV571171       <-- TGATA-TA-CTGTAATAAATGTGTAATCAAGTTCTCAGTTCTCAgt....
FD978680       --> ..................................................
EV547937       --> ..................................................
EV565936       --> ..................................................
EV567364       --> ..................................................
FD550902       --> ..................................................

               1801   -   1851
UN19580        --> TTCATCTCTCTTTCAT
                   ~~~~~~~~~~~~~~~~
EV572324       <-- ................
FD546807       <-- ................
FD974873       <-- TTCATCTCTCTTTCAT
EV571171       <-- ................
FD978680       --> ................
EV547937       --> ................
EV565936       --> ................
EV567364       --> ................
FD550902       --> ................