1 - 51
UN19591 --> GGGATCTGTCTCGTTTCTGAGAAATATAAACCGAGAGA--GAGG--AGAA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD960647 <-- .GGATCTGTCTCGTTTCTGAGAAATATAAACCGAGAGA--GAGG--AGAA
FD974369 <-- .............TTTCTGAGAAATATAAACCGAGAGA--GAGG--AGAA
EV545027 <-- ..................GAGAAATACAAACCGAGAGA--GAGG--AGAA
FD984880 <-- ................ggGAGAAATATAAATCGAGAGAAAGAGGGGAGAA
FD554830 <-- .....................ggaaatcgagagaaAGA--GGGG--AGAA
EV549580 --> GGGATCTGTCTCGTTTCTGAGAAATACAAACCGAGAGA--GAGG--AGAA
FD964718 --> .GGATCTGTCTCGTTTCTGAGAAATATAAACCGAGAGA--GAGG--AGAA
FD978053 --> .GGATCTGTCTCGTTTCTGAGAAATATAAACCGAGAGA--GAGG--AGAA
FD989049 --> ................ggGAGAAATATAAATCGAGAGAAAGAGGGGAGAA
FD559056 --> .....................ggaaatcgagagaaAGA--GGGG--AGAA
51 - 101
UN19591 --> AGTGTTAATCTCGAGTTTAATTATCAATGGAAGGGATCACGGAAGGAGTT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD960647 <-- AGTGTTAATCTCGAGTTTAATTATCAATGGAAGGGATCACGGAAGGAGTT Raphanus raphanistrum subsp. maritimus
FD974369 <-- AGTGTTAATCTCGAGTTTAATTATCAATGGAAGGGATCACGGAAGGAGTT Raphanus raphanistrum subsp. raphanistrum (NY)
EV545027 <-- AGTGTTAATCTCGAGTTTAATTATCAATGGAAGGGATCACGGAAGGAGTT Raphanus raphanistrum subsp. raphanistrum (NY)
FD984880 <-- AGTGTTAACCTCGAGTTTAATTAACAATGGAAGGGATCACGGAAGGAGTT Raphanus raphanistrum subsp. landra
FD554830 <-- AGTGTTAACCTCGAGTTTAATTAACAATGGAAGGGATCACGGAAGGAGTT Raphanus raphanistrum subsp. landra
EV549580 --> AGTGTTAATCTCGAGTTTAATTATCAATGGAAGGGATCACGGAAGGAGTT Raphanus raphanistrum subsp. raphanistrum (NY)
FD964718 --> AGTGTTAATCTCGAGTTTAATTATCAATGGAAGGGATCACGGAAGGAGTT Raphanus raphanistrum subsp. maritimus
FD978053 --> AGTGTTAATCTCGAGTTTAATTATCAATGGAAGGGATCACGGAAGGAGTT Raphanus raphanistrum subsp. raphanistrum (NY)
FD989049 --> AGTGTTAACCTCGAGTTTAATTAACAATGGAAGGGATCACGGAAGGAGTT Raphanus raphanistrum subsp. landra
FD559056 --> AGTGTTAACCTCGAGTTTAATTAACAATGGAAGGGATCACGGAAGGAGTT Raphanus raphanistrum subsp. landra
101 - 151
UN19591 --> AACAACATGAGCTTGGCCGTTGATTCGCAGAAGAAGAATCGGATTCAAGT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD960647 <-- AACAACATGAGCTTGGCCGCTGATTCGCAGAAGAAGAATCGGATTCAAGT
FD974369 <-- AACAACATGAGCTTGGCCGTTGATTCGCAGAAGAAGAATCGGATTCAAGT
EV545027 <-- AACAACATGAGCTTGGCCGTTGATTCGCAGAAGAAGAATCGGATTCAAGT
FD984880 <-- AACAACATGAGCTTGGCCGTTGATTCGCAGAAGAAGAATCGGATTCAAGT
FD554830 <-- AACAACATGAGCTTGGCCGTTGATTCGCAGAAGAAGAATCGGATTCAAGT
EV549580 --> AACAACATGAGCTTGGCCGTTGATTCGCAGAAGAAGAATCGGATTCAAGT
FD964718 --> AACAACATGAGCTTGGCCGCTGATTCGCAGAAGAAGAATCGGATTCAAGT
FD978053 --> AACAACATGAGCTTGGCCGTTGATTCGCAGAAGAAGAATCGGATTCAAGT
FD989049 --> AACAACATGAGCTTGGCCGTTGATTCGCAGAAGAAGAATCGGATTCAAGT
FD559056 --> AACAACATGAGCTTGGCCGTTGATTCGCAGAAGAAGAATCGGATTCAAGT
151 - 201
UN19591 --> TTCCAACACTAAGAAACCATTGTTCTTCTATGTCAATCTCGCCAAGAGGT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD960647 <-- TTCCAACACTAAGAAACCATTGTTTTTTTATGTCAATCTCGCCAAGGGGT Raphanus raphanistrum subsp. maritimus
FD974369 <-- TTCCAACACTAAGAAACCGTTGTTTTTTTATGTCAATCTCGCCAAGAGGT Raphanus raphanistrum subsp. raphanistrum (NY)
EV545027 <-- TTCCAACACTAAGAAACCGTTGTTCTTCTATGTCAATCTCGCCAAGAGGT Raphanus raphanistrum subsp. raphanistrum (NY)
FD984880 <-- TTCCAACACTAAGAAACCATTGTTCTTCTACGTCAATCTCGCCAAGAGGT Raphanus raphanistrum subsp. landra
FD554830 <-- TTCCAACACTAAGAAATCATTGTTCTTCTACGTCAATCTCGCCAAGAGGT Raphanus raphanistrum subsp. landra
EV549580 --> TTCCAACACTAAGAAACCGTTGTTCTTCTATGTCAATCTCGCCAAGAGGT Raphanus raphanistrum subsp. raphanistrum (NY)
FD964718 --> TTCCAACACTAAGAAACCATTGTTCTTCTATGTCAATCTCGCCAAGGGGT Raphanus raphanistrum subsp. maritimus
FD978053 --> TTCCAACACTAAGAAACCGTTGTTCTTCTATGTCAATCTCGCCAAGAGGT Raphanus raphanistrum subsp. raphanistrum (NY)
FD989049 --> TTCCAACACTAAGAAACCATTGTTCTTCTACGTCAATCTCGCCAAGAGGT Raphanus raphanistrum subsp. landra
FD559056 --> TTCCAACACTAAGAAATCATTGTTCTTCTACGTCAATCTCGCCAAGAGGT Raphanus raphanistrum subsp. landra
201 - 251
UN19591 --> ACATGCAGCAGTACGCAGATGTGGAGTTGTCTGCACTTGGAATGGCCATT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD960647 <-- ACATGCAGCAGTACGCAGATGTGGAGTTGTCTGCACTTGGAATGGCCATT
FD974369 <-- TCATGCAGCAGTACGCAGATGTGGAGTTGTTTGCACTTGGAATGGCCATT
EV545027 <-- ACATGCAGCAGTACGCAGATGTGGAGTTGTCTGCACTTGGAATGGCCATT
FD984880 <-- ACATGCAGCAGTACGCAGATGTGGAGTTGTCTGCACTTGGAATGGCCATT
FD554830 <-- ACATGCAGCAGTACGCAGATGTGGAGTTGTCTGCACTTGGAATGGCCATT
EV549580 --> ACATGCAGCAGTACGCAGATGTGGAGTTGTCTGCACTTGGAATGGCCATT
FD964718 --> ACATGCAGCAGTACGCAGATGTGGAGTTGTCTGCACTTGGAATGGCCATT
FD978053 --> TCATGCAGCAGTACGCAGATGTGGAGTTGTCTGCACTTGGAATGGCCATT
FD989049 --> ACATGCAGCAGTACGCAGATGTGGAGTTGTCTGCACTTGGAATGGCCATT
FD559056 --> ACATGCAGCAGTACGCAGATGTGGAGTTGTCTGCACTTGGAATGGCCATT
251 - 301
UN19591 --> GCGACGGTTGTCACCGTTGCTGAGATATTGAAGAACAGTGGGTTTGCTGT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD960647 <-- GCGACGGTTGTCACCGTTGCTGAGATATTGAAGAACAGTGGGTTTGCTGT Raphanus raphanistrum subsp. maritimus
FD974369 <-- GCGACGGTTGTCACCGTTGCTGAGATATTGAAGAACAGTGGGTTTGCTGT Raphanus raphanistrum subsp. raphanistrum (NY)
EV545027 <-- GCGACGGTTGTCACCGTTGCTGAGATATTGAAGAACAGTGGGTTTGCTGT Raphanus raphanistrum subsp. raphanistrum (NY)
FD984880 <-- GCGACTGTTGTTACCGTAGCTGAGATATTGAAGAACAGCGGGTTTGCTGT Raphanus raphanistrum subsp. landra
FD554830 <-- GCGACTGTTGTTACCGTAGCTGAGATATTGAAGAACAGCGGGTTTGCTGT Raphanus raphanistrum subsp. landra
EV549580 --> GCGACGGTTGTCACCGTTGCTGAGATATTGAAGAACAGTGGGTTTGCTGT Raphanus raphanistrum subsp. raphanistrum (NY)
FD964718 --> GCGACGGTTGTCACCGTTGCTGAGATATTGAAGAACAGTGGGTTTGCTGT Raphanus raphanistrum subsp. maritimus
FD978053 --> GCGACGGTTGTCACCGTTGCTGAGATATTGAAGAACAGTGGGTTTGCTGT Raphanus raphanistrum subsp. raphanistrum (NY)
FD989049 --> GCGACTGTTGTTACCGTAGCTGAGATATTGAAGAACAGCGGGTTTGCTGT Raphanus raphanistrum subsp. landra
FD559056 --> GCGACTGTTGTTACCGTAGCTGAGATATTGAAGAACAGCGGGTTTGCTGT Raphanus raphanistrum subsp. landra
301 - 351
UN19591 --> TGAAAAGAAGATCATGACTTCGACTGTGGATATCAAGGACGGTGCAAGGG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD960647 <-- TGAAAAGAAGATCATGACTTCGACTGTGGATATCAAGGACGGTGCAAGGG
FD974369 <-- TGAAAAGAAGATCATGACTTCGACTGTGGATATCAAGGACGGTGCAAGGG
EV545027 <-- TGAAAAGAAGATCATGACTTCGACTGTGGATATCAAGGACGGTGCAAGGG
FD984880 <-- TGAAAAGAAGATCATGACTTCGACTGTGGATATCAAGGACGGTGCAAGGG
FD554830 <-- TGAAAAGAAGATCATGACTTCGACTGTGGATATCAAGGACGTTGCAAGGG
EV549580 --> TGAAAAGAAGATCATGACTTCGACTGTGGATATCAAGGACGGTGCAAGGG
FD964718 --> TGAAAAGAAGATCATGACTTCGACTGTGGATATCAAGGACGGTGCAAGGG
FD978053 --> TGAAAAGAAGATCATGACTTCGACTGTGGATATCAAGGACGGTGCAAGGG
FD989049 --> TGAAAAGAAGATCATGACTTCGACTGTGGATATCAAGGACGGTGCAAGGG
FD559056 --> TGAAAAGAAGATCATGACTTCGACTGTGGATATCAAGGACGTTGCAAGGG
351 - 401
UN19591 --> GTCGTCCTGTGCAGAAGCCTAAGATTGAGATAACGCTCGCCAAGTCTGAG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD960647 <-- GTCGTCCTGTGCAGAAGCCTAAGATTGAGATAACGCTCGCCAAGTCTGAG
FD974369 <-- GTCGTCCTGTGCAGAAGCCTAAGATTGAGATAACGCTCGCCAAGTTTGAG
EV545027 <-- GTCGTCCTGTGCAGAAGCCTAAGATTGAGATAACGCTCGCCAAGTCTGAG
FD984880 <-- GTCGTCCTGTGCAGAAGCCTAAGATTGAGATAACGCTCGCCAAGTCTGAG
FD554830 <-- GTCGTCCTGTGCAGAAGCCTAAGATTGAGATAACGCTCGCCAAGTCTGAG
EV549580 --> GTCGTCCTGTGCAGAAGCCTAAGATTGAGATAACGCTCGCCAAGTCTGAG
FD964718 --> GTCGTCCTGTGCAGAAGCCTAAGATTGAGATAACGCTCGCCAAGTCTGAG
FD978053 --> GTCGTCCTGTGCAGAAGCCTAAGATTGAGATAACGCTCGCCAAGTCTGAG
FD989049 --> GTCGTCCTGTGCAGAAGCCTAAGATTGAGATAACGCTCGCCAAGTCTGAG
FD559056 --> GTCGTCCTGTGCAGAAGCCTAAGATTGAGATAACGCTCGCCAAGTCTGAG
401 - 451
UN19591 --> AAGTTTGATGAATTAATGGCTGCGGCCAACGAAGACAAGGAGGCTGTAGA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD960647 <-- AAGTTTGATGAATTAATGGCTGCGGCCAACGAAGACAAGGAGGCTGTAGA
FD974369 <-- AAGTTTGATGAATTAATGGCTGCGGCCAACGAAGACAAGGAGGCTGTAGA
EV545027 <-- AAGCTTGATGAATTAATGGCTGCGGCCAACGAAGACAAGGAGGCTTTAGA
FD984880 <-- AAGTTTGATGAATTAATGGCTGCGGCCAACGAAGACAAGGAGGCTGTAGA
FD554830 <-- AAGTTTGATGAATTAATGGCTGCGGCCAACGAAGACAAGGAGGCTGTAGA
EV549580 --> AAGCTTGATGAATTAATGGCTGCGGCCAACGAAGACAAGGAGGCTTTAGA
FD964718 --> AAGTTTGATGAATTAATGGCTGCGGCCAACGAAGACAAGGAGGCTGTAGA
FD978053 --> AAGTTTGATGAATTAATGGCTGCGGCCAACGAAGACAAGGAGGCTGTAGA
FD989049 --> AAGTTTGATGAATTAATGGCTGCGGCCAACGAAGACAAGGAGGCTGTAGA
FD559056 --> AAGTTTGATGAATTAATGGCTGCGGCCAACGAAGACAAGGAGGCTGTAGA
451 - 501
UN19591 --> AGCCCAGGAGCAGAACTGAAATCTTTTTTTTTTTT--GAGTTTCTTTCGA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD960647 <-- AGCCCAGGAGCAGAACTGAAATCTTTTTTTTTTTT--GAGTTTCTTTCGA
FD974369 <-- AGCCCAGGAGCAGAACTGAAATTTTTTTTTTTTTTTTGAGTTTCTTTCGA
EV545027 <-- AGCCCAGGAGCAGAACTGAAATCTTTTTTTTTTTT-TGAGTTTCTTTCGA
FD984880 <-- AGCCCAGGAGCAGAACTGAAATCTTTTTTTTTTTT--GAGTTTCTTTCGA
FD554830 <-- AGCCCAGGAGCAGAACTGAAATCTTTTTTTTTTT---GAGTTTCTTTCGA
EV549580 --> AGCCCAGGAGCAGAACTGAAATCTTTTTTTTTTTT-TGAGTTTCTTTCGA
FD964718 --> AGCCCAGGAGCAGAACTGAAATCTTTTTTTTTTTT--GAGTTTCTTTCGA
FD978053 --> AGCCCAGGAGCAGAACTGAAATTTTTTTTTTTTTTt..............
FD989049 --> AGCCCAGGAGCAGAACTGAAATCTTTTTTTTTTTT--GAGTTTCTTTCGA
FD559056 --> AGCCCAGGAGCAGAACTGAAATCTTTTTTTTTTT---GAGTTTCTTTCGA
501 - 551
UN19591 --> CCATCTGATTTCTCTGTTTCTCTGCTAAAACACTTTGATTTATTTTTTGT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD960647 <-- CCATCTGATTTCTCTGTTTCTCTGCTAAAACACTTTGATTTATTTTTTGT
FD974369 <-- CCATCTGATTTCTCTGTTTCTCTGCTAAAACACTTTGATTTATTTTTTGT
EV545027 <-- CCATCTGATTTCTCTGTTTCTCTGCTAAAACACTTTGATTTATTTTTTGT
FD984880 <-- CCATCTGATTTCTCTGTTTCTCTGCTAAAACACTTTGATTTATTTTTTGT
FD554830 <-- CCATCTGATTTCTCTGTTTCTCTGCTAAAACACTTTGATTTATTTTTTGT
EV549580 --> CCATCTGATTTCTCTGTTTCTCTGCTAAAACACTTTGATTTATTTTTTGT
FD964718 --> CCATCTGATTTCTCTGTTTCTCTGCTAAAACACTTTGATTTATTTTTTGT
FD978053 --> ..................................................
FD989049 --> CCATCTGATTTCTCTGTTTCTCTGCTAAAACACTTTGATTTATTTTTTGT
FD559056 --> CCATCTGATTTCTCTGTTTCTCTGCTAAAACACTTTGATTTATTTTTTGT
551 - 601
UN19591 --> TTTGGCTCACTTTGAATGTTATCTTGGATTGTGTTCGATGTACCTGTGAA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD960647 <-- TTTGGCTCACTTTGAATGTTATCTTGGATTGTGTTCGATGTACCTGTGAA
FD974369 <-- TTTGGCTCACTTTGAATGTTATCTTGGATTGTGTTCGATGTACCTGTGAA
EV545027 <-- TTTGGCTTACTTTGAATGTTATCTTGGATTGTGTTCGATGTACCTGTGAA
FD984880 <-- TTTGGCTCACTTTGAATGTTATCTTGGATTGTGTTCGATGTACCTGTGAA
FD554830 <-- TTTGGCTCACTTTGAATGTTATCTTGGATTGTGTTCGATGTACCTGTGAA
EV549580 --> TTTGGCTTACTTTGAATGTTATCTTGGATTGTGTTCGATGTACCTGTGAA
FD964718 --> TTTGGCTCACTTTGAATGTTATCTTGGATTGTGTTCGATGTACCTGTGAA
FD978053 --> ..................................................
FD989049 --> TTTGGCTCACTTTGAATGTTATCTTGGATTGTGTTCGATGTACCTGTGAA
FD559056 --> TTTGGCTCACTTTGAATGTTATCTTGGATTGTGTTCGATGTACCTGTGAA
601 - 651
UN19591 --> CGTGTTTATTTACAGATCGTAGTAGGTTGTAGACAAGATTTTGTTGCATA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD960647 <-- CGTGTTTATTTACAGATCGT---AGGTTGTAGACAAGATTTTGTTGCATA
FD974369 <-- CGTGTTTATTTACAGATCGTAGTAGGTTGTAGAC................
EV545027 <-- CGTGTTTATTTACAGATCGTAGTAGGTTGTAGACAAGATTTTGTTGCATA
FD984880 <-- CGTGTTTATTTACAGATCGTAGTAGGTTGTAGACAAGATTTTGTTGCATA
FD554830 <-- CGTGTTTATTTACAGATCGTAGTAGGTTGTAGACAAGATTTTGTTGCATA
EV549580 --> CGTGTTTATTTACAGATCGTA.............................
FD964718 --> CGTGTTTATTTACAGATCGTAG---GTTGTAGACAAGATTTTGTTGCATA
FD978053 --> ..................................................
FD989049 --> CGTGTTTATTTACAGATCGTAGTAGGTTGTAGACAAGATTTTGTTGCATA
FD559056 --> CGTGTTTATTTACAGATCGTAGTAGGTTGTAGACAAGATTTTGTTGCATA
651 - 701
UN19591 --> ACGTTTTCGAATATATATCCTATTCGAAACCTTTAACAC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD960647 <-- ACGTTTTCGAATATATATCCTATTCGAAACCTTTAACAC
FD974369 <-- .......................................
EV545027 <-- ACGTTTTCGAATATATATCCTATTCGAAACC........
FD984880 <-- ACGTTTTCGAATATATATCCTATTCGAAACC........
FD554830 <-- ACGTTTTCGAATATATATCCTATTCGAAACCT.......
EV549580 --> .......................................
FD964718 --> ACGTTTTCGAATATATATCCTATTCGAAACCTTTAACAC
FD978053 --> .......................................
FD989049 --> ACGTTTTCGAATATATATCCTATTCGAAACCaaaa....
FD559056 --> ACGTTTTCGAATATATATCCTATTCGAAACCT.......
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