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Alignment for radish unigene UN19602

               1      -     51
UN19602        --> GGAGAACAAAATTTGGAAGATTAGGTAGAAA-----GAAAGCGAAGGAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX759263       <-- ..................................................
EX759121       <-- ..................................................
EY902003       <-- ..................................................
EW739231       <-- ..................................................
FD975543       <-- ..................................................
EY894499       <-- ..................................................
EY905610       --> GGAGAACAAAATTTGGAAGATTAGGTAGAAA-----GAAAGCGAAGGAAA
EY898438       --> ..........ATTTGGAAGATTAGGTAGAAAAGAAAGAAAGCGAAGGAAA
EX754911       --> ....................ggAGGTAGAAA-----GAAAGCGAAGGAAA
EX755102       --> ........................................ggGAAGGAAA
FD941254       --> ..................................................
FD979515       --> ..................................................
EW734032       --> ..................................................
EX750379       --> ..................................................

               51     -    101
UN19602        --> CAAACCGTATCT--TCAGGCTTCAGCTTCAGCTATGGCGGCCGAGAATCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX759263       <-- ..................................................
EX759121       <-- ..................................................
EY902003       <-- ..................................................
EW739231       <-- ..................................................
FD975543       <-- ..................................................
EY894499       <-- ..................................................
EY905610       --> CAAACCGTATCT--TCAGGCTTCAGCTTCAGCTATGGCGGCCGAGAATCC
EY898438       --> CAAACTGTATCTCCCCAGGCTTCAGCTTCAGCTATGGCGGCCGAGAATCC
EX754911       --> CAAACCGTATCT--TCAGGCTTCAGCTTCAGCTATGGCGGCCGAGAATCC
EX755102       --> CAAACCGTATCT--TCAGGCTTCAGCTTCAGCTATGGCGGC-GAGAATCC
FD941254       --> ...gggGTATCT--CCAGGCTTCAGCTTCAGCTATGGCGGCCGAGAATCC
FD979515       --> ........ATCT--CCACGCTTCAGCTTCAGCTATGGCGGCCGAGAATCC
EW734032       --> ....ggtatctccagccgcCTTCAGCTTCAGCTATGGCGGCCGAGAATCC
EX750379       --> ..................................................

               101    -    151
UN19602        --> TCCTTCAAGCGCTGTAGACTTCGACACGAGTCTCGATTCCGGTTCAAACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX759263       <-- ..................................................
EX759121       <-- ..................................................
EY902003       <-- ..................................................
EW739231       <-- ..................................................
FD975543       <-- ..................................................
EY894499       <-- ..................................................
EY905610       --> TCCTTCAAGCGCTGTAGATTTCGACACGAGTCTCGATTCCGGTTCAAACC
EY898438       --> TCCTTCAAGCGCTGTAGACTTCGACACGAGTCTCGATTCCGGTTCAAACC
EX754911       --> TCCTTCAAGCGCTGTAGATTTCGACACGAGTCTCGATTCCGGTTCAAACC
EX755102       --> TCCTTCAAGCGCTGTAGATTTCGACACGAGTCTCGATTCCGGTTCAAACC
FD941254       --> TCCTTCAAGCGCTGTAGACTTCGACACGAGTCTCGATTCCGGTTCAAAAC
FD979515       --> TCCTTCAAGCGCTGTAGACTTCGACACGAGTCTCGATTCCGGTTCAAACC
EW734032       --> TCCTTCAAGCGCTGTAGACTTCGACACGAGTCTCGATTCCGGTTCAAACA
EX750379       --> ..................................................

               151    -    201
UN19602        --> ACAACCCAAACGCTAATGATTTGACCAATCAAGACTCTTCCAACGCACTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX759263       <-- ......CAAACGCTAATGATTTGACCAATCAAGACTCTTCCAACGCACTG
EX759121       <-- ..............AATGATTTGACCAATCAAGACTCTTCCAACGCACTG
EY902003       <-- ..............AATGATTTGATCAATCAAGACTCTTCCAACGCACTG
EW739231       <-- ..........................................ACGCATTG
FD975543       <-- ..................................................
EY894499       <-- ..................................................
EY905610       --> ACAACCCAAACGCTAATGATTTGATCAATCAAGACTCTTCCAACGCACTG
EY898438       --> ACAACCCAAACGCTAGTGATTTGACCAATCAAGACTCTTCCAACGCACTG
EX754911       --> ACAACCCAAACGCTAATGATTTGACCAATCAAGACTCTTCCAACGCACTG
EX755102       --> ACAACCCAAACGCTAATGATTTGACCAATCAAGACTCTTCCAACGCACTG
FD941254       --> ACAACCCAAACGCTAGTGATTTGACCAATCAAGACTCTTCCAACGCATTG
FD979515       --> ACAACCCAAACGCTAATGATTTGACCAATCAAGACTCTTCCAACGCATTG
EW734032       --> ACAACCCAAACGCTAACGGTTTGACCAATCAAGACTCTTCCAACGCATTG
EX750379       --> ..................................................

               201    -    251
UN19602        --> ACACTCCCTTCTACCGCCGTTTGTCTCGGCCGTTTCGCCGGAGATGCTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX759263       <-- ACACTCCCTTCTACCGCCGTTTGTCTCGGCCGTTTCGCCGGAGATGCTGC
EX759121       <-- ACACTCCCTTCTACCGCCGTTTGTCTCGGCCGTTTCGCCGGAGATGCTGC
EY902003       <-- ACACTCCCTTCTACCGCCGTTTGTCTCGGCCGTTTCGCCGGAGATGCTGC
EW739231       <-- ACACTCCCTTCTACCGCCGTTTGTCTCGGCCGTTTCGCCGGAGATGCTGC
FD975543       <-- ..........CTACCGCCGTTTGTCTCGGCCGTTTCGCCGGAGATGCTGC
EY894499       <-- ..........................................GATACTGC
EY905610       --> ACACTCCCTTCTACCGCCGTTTGTCTCGGCCGTTTCGCCGGAGATGCTGC
EY898438       --> ACACTCCCTTCTACCGCCGTTTGTCTCGGCCGTTTCGCCGGAGATACTGC
EX754911       --> ACACTCCCTTCTACCGCCGTTTGTCTCGGCCGTTTCGCCGGAGATGCTGC
EX755102       --> ACACTCCCTTCTACCGCCGTTTGTCTCGGCCGTTTCGCCGGAGATGCTGC
FD941254       --> ACACTCCCTTCTACCGCCGTTTGTCTAGGCCGTTTCGCCGGAGATGCTGC
FD979515       --> ACGCTCCCTTCTACCGCCGTTTGTCTCGGCCGTTTCGCCGGAGATGCTGC
EW734032       --> ACACTCCCTTCTACCGCCGTTTGTCTCGGCCGTTTCGCCGGAGATGCTGC
EX750379       --> ..................................................

               251    -    301
UN19602        --> TGGCGGCGCCGTCATGGGCTCTATATTCGGATATGGTTCTGGATTGTTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX759263       <-- TGGCGGCGCCGTCATGGGCTCTATATTCGGATATGGTTCTGGATTGTTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX759121       <-- TGGCGGCGCCGTCATGGGCTCTATATTCGGATATGGTTCTGGATTGTTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902003       <-- TGGCGGCGCCGTCATGGGCTCTATATTCGGATATGGTTCTGGATTGTTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW739231       <-- TGGCGGCGCCGTCATGGGCTCTATATTCGGCTATGGTTCTGGATTGTTTA  Raphanus sativus cv Rat-Tail Radish #3870
FD975543       <-- TGGCGGCGCCGTCATGGGCTCTATATTCGGATATGGTTCTGGATTGTTTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY894499       <-- TGGCGGCGCCGTCATGGGCTCTATATTCGGCTATGGTTCTGGATTGTTTA  Raphanus raphanistrum subsp. maritimus
EY905610       --> TGGCGGCGCCGTCATGGGCTCTATATTCGGATATGGTTCTGGATTGTTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY898438       --> TGGCGGCGCCGTCATGGGCTCTATATTCGGCTATGGTTCTGGATTGTTTA  Raphanus raphanistrum subsp. maritimus
EX754911       --> TGGCGGCGCCGTCATGGGCTCTATATTCGGATATGGTTCTGGATTGTTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX755102       --> TGGCGGCGCCGTCATGGGCTCTATATTCGGATATGGTTCTGGATTGTTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD941254       --> TGGCGGCGCCGTCATGGGCTCTATATTCGGCTATGGTTCTGGATTGTTTA  Raphanus sativus var. oleiformis
FD979515       --> TGGCGGCGCCGTCATGGGCTCTATATTCGGATATGGTTCTGGATTGTTTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW734032       --> TGGCGGCGCCGTCATGGGCTCTATATTCGGCTATGGTTCTGGATTGTTTA  Raphanus sativus cv Rat-Tail Radish #3870
EX750379       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               301    -    351
UN19602        --> AGAAGAAAGGATTTAAGGGATCATTTGCTGATGCGGGTCAGTCTGCAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX759263       <-- AGAAGAAAGGATTTAAGGGATCATTTGCTGATGCGGGTCAGTCTGCAAAG
EX759121       <-- AGAAGAAAGGATTTAAGGGATCATTTGCTGATGCGGGTCAGTCTGCAAAG
EY902003       <-- AGAAGAAAGGATTTAAGGGATCATTTGCTGATGCGGGTCAGTCTGCAAAG
EW739231       <-- AGAAGAAAGGATTAAAGGGATCATTTGCTGATGCGGGTCAGTCTGCAAAG
FD975543       <-- AGAAGAAAGGATTTAAGGGATCATTTGCTGATGCGGGTCAGTCTGCAAAG
EY894499       <-- AGAAGAAAGGATTTAAGGGATCATTTGCTGATGCGGGTCAGTCTGCAAAG
EY905610       --> AGAAGAAAGGATTTAAGGGATCATTTGCTGATGCGGGTCAGTCTGCAAAG
EY898438       --> AGAAGAAAGGATTTAAGGGATCATTTGCTGATGCGGGTCAGTCTGCAAAG
EX754911       --> AGAAGAAAGGATTTAAGGGATCATTTGCTGATGCGGGTCAGTCTGCAAAG
EX755102       --> AGAAGAAAGGATTTAAGGGATCATTTGCTGATGCGGGTCAGTCTGCAAAG
FD941254       --> AGAAGAAAGGATTTAAGGGATCATTTGCTGATGCCGGTCAGTCTGCAAAG
FD979515       --> AGAAGAAAGGATTTAAGGGATCATTTGCTGATGCGGGTCAGTCTGCAAAG
EW734032       --> AGAAGAAAGGATTAAAGGGATCATTTGCTGATGCGGGTCAGTCTGCAAAG
EX750379       --> ..................................................

               351    -    401
UN19602        --> AATTTTGCAATTTTATCTGGAGTGCACAGTTTGGTTGTCTGTCTTCTCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX759263       <-- AATTTTGCAATTTTATCTGGAGTGCACAGTTTGGTTGTTTGTCTTCTCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX759121       <-- AATTTCGCAATTTTATCTGGAGTGCACAGTTTGGTTGTTTGTCTTCTCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902003       <-- AATTTTGCAATTTTATCTGGAGTGCACAGTTTGGTTGTTTGTCTTCTCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW739231       <-- AATTTTGCAATTTTATCTGGAGTGCACAGTTTGGTTGTCTGTCTTCTCAA  Raphanus sativus cv Rat-Tail Radish #3870
FD975543       <-- AATTTTGCAATTTTATCTGGAGTGCACAGTTTGGTTGTCTGTCTTCTGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY894499       <-- AATTTTGCAATTTTATCTGGAGTGCACAGTTTGGTTGTCTGTCTTCTCAA  Raphanus raphanistrum subsp. maritimus
EY905610       --> AATTTTGCAATTTTATCTGGAGTGCACAGTTTGGTTGTTTGTCTTCTCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY898438       --> AATTTTGCAATTTTATCTGGAGTGCACAGTTTGGTTGTCTGTCTTCTCAA  Raphanus raphanistrum subsp. maritimus
EX754911       --> AATTTCGCAATTTTATCTGGAGTGCACAGTTTGGTTGTTTGTCTTCTCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX755102       --> AATTTTGCAATTTTATCTGGAGTGCACAGTTTGGTTGTTTGTCTTCTCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD941254       --> AATTTTGCAATTTTATCTGGAGTGCACAGTTTGGTTGTCTGTCTTCTCAA  Raphanus sativus var. oleiformis
FD979515       --> AATTTTGCAATTTTATCTGGAGTGCACAGTTTGGTTGTCTGTCTTCTGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW734032       --> AATTTTGCAATTTTATCTGGAGTGCACAGTTTGGTTGTCTGTCTTCTCAA  Raphanus sativus cv Rat-Tail Radish #3870
EX750379       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               401    -    451
UN19602        --> GAAACTGCGAGGGAAAGATGATGCCATTAACGTTGGAATTGCTGGATGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX759263       <-- GAAACTGCGAGGGAAAGATGATGCCATTAACGTTGGAATTGCTGGATGCT
EX759121       <-- GAAACTGCGAGGGAAAGATGATGCCATTAACGTTGGAATTGCTGGATGCT
EY902003       <-- GAAACTGCGAGGGAAAGATGATGCCATTAACGTTGGAATTGCTGGATGCT
EW739231       <-- GAAACTGCGAGGGAAAGATGATGCCATTAACGTTGGAATTGCTGGATGCT
FD975543       <-- GAAACTGCGAGGGAAAGATGATGCCATTAACGTTGGAATTGCTGGATGCT
EY894499       <-- GAAACTGCGAGGGAAAGATGATGCCATTAACGTTGGAATTGCTGGACGCT
EY905610       --> GAAACTGCGAGGGAAAGATGATGCCATTAACGTTGGAATTGCTGGATGCT
EY898438       --> GAAACTGCGAGGGAAAGATGATGCCATTAACGTTGGAATTGCTGGACGCT
EX754911       --> GAAACTGCGAGGGAAAGATGATGCCATTAACGTTGGAATTGCTGGATGCT
EX755102       --> GAAACTGCGAGGGAAAGATGATGCCATTAACGTTGGAATTGCTGGATGCT
FD941254       --> GAAACTGCGAGGGAAAGATGATGCCATTAACGTTGGAATTGCTGGATGCT
FD979515       --> GAAACTGCGAGGGAAAGATGATGCCATTAACGTTGGAATTGCTGGATGCT
EW734032       --> GAAACTGCGAGGGAAAGATGATGCCATTAACGTTGGAATTGCTGGATGCT
EX750379       --> ..................................................

               451    -    501
UN19602        --> GCACTGGCCTTGCTCTTAGTTACCCCGGTGCACCACAAGCAATGCTACAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX759263       <-- GCACTGGCCTTGCTCTTAGTTACCCCGGTGCACCACAAGCAATGCTACAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX759121       <-- GCACTGGCCTTGCTCTTAGTTACCCCGGTGCACCACAAGCAATGCTACAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902003       <-- GCACTGGCCTTGCTCTTAGTTACCCCGGTGCACCACAAGCAATGCTACAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW739231       <-- GCACTGGCCTTGCTCTTAGTTACCCCGGTGCACCACAAGCAATGCTACAG  Raphanus sativus cv Rat-Tail Radish #3870
FD975543       <-- GCACTGGCCTTGCTCTTAGTTACCCCGGTGCACCACAAGCAATGCTACAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY894499       <-- GCACTGGCCTTGCTCTTAGTTACCCCGGTGCACCACAAGCAATGCTACAG  Raphanus raphanistrum subsp. maritimus
EY905610       --> GCACTGGCCTTGCTCTTAGTTACCCCGGTGCACCACAAGCAATGCTACAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY898438       --> GCACTGGCCTTGCTCTTAGTTACCCCGGTGCACCACAAGCAATGCTACAG  Raphanus raphanistrum subsp. maritimus
EX754911       --> GCACTGGCCTTGCTCTTAGTTACCCCGGTGCACCACAAGCAATGCTACAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX755102       --> GCACTGGCCTTGCTCTTAGTTACCCCGGTGCACCACAAGCAATGCTACAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD941254       --> GCACTGGCCTTGCTCTTAGTTACCCCGGTGCACCACAAGCAATGCTACAG  Raphanus sativus var. oleiformis
FD979515       --> GCACTGGCCTTGCTCTTAGTTACCCCGGTGCACCACAAGCAATGCTACAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW734032       --> GCACTGGCCTTGCTCTTAGTTACCCCGGTGCACCACAAGCAATGCTACAG  Raphanus sativus cv Rat-Tail Radish #3870
EX750379       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               501    -    551
UN19602        --> AGCTGTGTCACTTTTGGTGCCTTTTCTTTCATCCTCGAAGGACTTAACAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX759263       <-- AGCTGTGTCACTTTTGGTGCCTTTTCTTTCATCCTCGAAGGACTTAACAA
EX759121       <-- AGCTGTGTCACTTTTGGTGCCTTTTCTTTCATCCTCGAAGGACTTAACAA
EY902003       <-- AGCTGTGTCACTTTTGGTGCCTTTTCTTTCATCCTCGAAGGACTTAACAA
EW739231       <-- AGCTGTGTCACTTTTGGTGCCTTTTCTTTCATCCTCGAAGGACTTAACAA
FD975543       <-- AGCTGTGTCACTTTTGGTGCCTTTTCTTTCATCCTCGAAGGACTTAACAA
EY894499       <-- AGCTGTGTCACTTTTGGTGCCTTTTCTTTCATCCTCGAAGGACTTAACAA
EY905610       --> AGCTGTGTCACTTTTGGTGCCTTTTCTTTCATCCTCGAAGGACTTAACAA
EY898438       --> AGCTGTGTCACTTTTGGTGCCTTTTCTTTCATCCTCGAAGGACTTAACAA
EX754911       --> AGCTGTGTCACTTTTGGTGCCTTTTCTTTCATCCTCGAAGGACTTAACAA
EX755102       --> AGCTGTGTCACTTTTGGTGCCTTTTCTTTCATCCTCGAAGGACTTAACAA
FD941254       --> AGCTGTGTCACTTTTGGTGCCTTTTCTTTCATCCTCGAAGGACTTAACAA
FD979515       --> AGCTGTGTCACTTTTGGTGCCTTTTCTTTCATCCTCGAAGGACTTAACAA
EW734032       --> AGCTGTGTCACTTTTGGTGCCTTTTCTTTCATCCTCGAAGGACTTAACAA
EX750379       --> ..................................................

               551    -    601
UN19602        --> AAGGGAAACAGCTTTAGCTCACTCTGTCTACTTGAGACATGATGATCAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX759263       <-- AAGGGAAACAGCTTTAGCTCACTCTGTCTACTTGAGACATGATGATCAAA
EX759121       <-- AAGGGAAACAGCTTTAGCTCACTCTGTCTGCTTGAGACATGATGATCAAA
EY902003       <-- AAGGGAAACAGCTTTAGCTCACTCTGTCTACTTGAGACATGATGATCAAA
EW739231       <-- AAGGGAAACAGCTTTAGCTCACTCTGTCTACTTGAGACATGATGATCAAA
FD975543       <-- AAGGGAAACAGCTTTAGCCCACTCTGTCTACTTGAGACATGATGATCAAA
EY894499       <-- AAGGGAAACAGCTTTAGCTCAGTCTGTCTACTTGAGACATGGTGATCATA
EY905610       --> AAGGGAAACAGCTTTAGCTCACTCTGTCTACTTGAGACATGATGATCAAA
EY898438       --> AAGGGAAACAGCTTTAGCTCAGTCTGTCTACTTGAGACATGGTGATCATA
EX754911       --> AAGGGAAACAGCTTTAGCTCACTCTGTCTGCTTGAGACATGATGATCAAA
EX755102       --> AAGGGAAACAGCTTTAGCTCACTCTGTCTACTTGAGACATGATGATCAAA
FD941254       --> AAGGGAAACAGCTTTAGCTCACTCTGTCTAC...................
FD979515       --> AAGGGAAACAGCTTTAGCCCACTCTGTCTACTTGAGACATGATGATCAAA
EW734032       --> AAGGGAAACAGCTTTAGCTCACTCTGTCTACTTGAGACATGATGATCAAA
EX750379       --> ...........................gTACTTGAGACATGATGATCAAA

               601    -    651
UN19602        --> CCAGAAGTCTGAGAGATGATTTACCACTCTCTTTGGCTCTCCCCATCCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX759263       <-- CCAGAAGTCTCAGAGATGATTTACCACTCTCTTTGACTCTCCCCATCCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX759121       <-- CCAGAAGTTTCAGAGATGATTTACCATTCTCTTTGGCTCTCCCCATTCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902003       <-- CCAGAAGTTTCAGAGATGATTTACCACTCTCTTTGGCTCTCCCCATCCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW739231       <-- CCAGAAGTCTGAGAGATGATTTACCACTCTCTTTGGCTCTCCCCATCCAT  Raphanus sativus cv Rat-Tail Radish #3870
FD975543       <-- CCAGAAGTCTGAGAGATGATTTACCACTCTCTTTGGCTCTCCCCATCCAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY894499       <-- CCAGAAGTCTGAGAGATGATTTACCACTCTCTTTGGCTCTCCCCATCCAT  Raphanus raphanistrum subsp. maritimus
EY905610       --> CCAGAAGTCTCAGAGATGATTTACCACTCTCTTTGGCTCTCCCCATCCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY898438       --> CCAGAAGTCTGAGAGATGATTTACCACTCTCTTTGGCTCTCCCCATCCAT  Raphanus raphanistrum subsp. maritimus
EX754911       --> CCAGAAGTCTCAGAGATGATTTACCATTCTCTTTGGCTCTCCCCATTCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX755102       --> CCAGAAGTCTCAGAGATGATTTACCACTCTCTTTGACTCTCCCCATCCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD941254       --> ..................................................  Raphanus sativus var. oleiformis
FD979515       --> CCAGAAGTCTGAGAGATGATTTACCACTCTCTTTGGCTCTCCCCATCCAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW734032       --> CCAGAAGTCTGAGAGATGATTTACCACTCTCTTTGGCTCTCCCCATCCAT  Raphanus sativus cv Rat-Tail Radish #3870
EX750379       --> CCAGAAGTCTGAGAGATGATTTACCACTCTCTTTGGCTCTCCCCATCCAT  Raphanus raphanistrum subsp. maritimus

               651    -    701
UN19602        --> GAAGAGATCAAAGGAGCTTTCTCTTCTTTCTGCAAATCTTTAACTAAGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX759263       <-- GAAGAGATCAAAGGAGCTTTCTCTTCTTTCTGCAAATCTTTAACTAAGCC
EX759121       <-- GAAGAGATCAAAGGAGCTTTCTCTTCTTTCTGCAAATCTTTAACTAAGCC
EY902003       <-- GAAGAGATCAAAGGAGCTTTCTCTTCTTTCTGCAAATCTTTAACTAAGCC
EW739231       <-- GAAGAGATCAAAGGAGCTTTCTCTTCTTTCTGCAAATCTTTAACTAAGCC
FD975543       <-- GAAGAGATCAAAGGAGCTTTCTCTTCTTTCTGCAAATCTTTAACTAAGCC
EY894499       <-- GAAGAGATCAAAGGAGCTTTCTCTTCTTTCTGCAAATCTTTAACTAAGCC
EY905610       --> GAAGAGATCAAAGGAGCTTTCTCTTCTTTCTGCAAATCTTTAACTAAGCC
EY898438       --> GAAGAGATCAAAGGAGCTTTCTCTTCTTTCTGCAAATCTTTAACTAAGCC
EX754911       --> GAAGAGATCAAAGGAGCTTTCTCTTCTTTCTGCAAATCTTTAACTAAGCC
EX755102       --> GAAGAGATCAAAGGAGCTTTCTCTTCTTTCTGCAAATCTTTAACTAAGCC
FD941254       --> ..................................................
FD979515       --> GAAGAGATCAAAGGAGCTTTCTCTTCTTTCTGCAAATCTTTAACTAAGCC
EW734032       --> GAAGAGATCAAAGGAGCTTTCTCTTCTTTCTGCAAATCTTTAACTAAGCC
EX750379       --> GAAGAGATCAAAGGAGCTTTCTCTTCTTTCTGCAAATCTTTAACTAAGCC

               701    -    751
UN19602        --> CAAGAAGCTCGGCTTTCCCAGCTCACGTTGATTCAAGTTTTTGTTTTAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX759263       <-- CAAGAAGCTCGGCTTTCCCAGCTCACGTTGATTCAAGTTTTTGTTTTAAT
EX759121       <-- CAAGAAGCTCGGCTTTCCCAGCTCACGTTGATTCAAGTTTTTGTTTTAAT
EY902003       <-- CAAGAAGCTCGGCTTTCCCAGCTCACGTTGATTCAAGTTTTTGTTTTAAT
EW739231       <-- CAAGAAGCTCGGCTTTCCCAGCTCACGTTGATTCAATTTTTTGTTTTAAT
FD975543       <-- CAAGAAGCTCGGCTTTCCCAGCTCACGTTGATTCAAGTTTTTGTTTTAAT
EY894499       <-- CAAGAAGCTCGGCTTTCCCAGCTCACGTTGATTCAAGTTTTTGTTTTAAT
EY905610       --> CAAGAAGCTCGGCTTTCCCAGCTCACGTTGATTCAAGTTTT-G-TTTAAT
EY898438       --> -AAGAAGCTCGGCTTTCCCAGCTCACGTTGATTCAAGTT...........
EX754911       --> CAAGAAGCTCGGCTTTCCCAGCTCACGTTGATTCAAGTTTTgtt......
EX755102       --> CAAGAAGCTCGGCTTTCCCAGCTCACGTTGATTCAAGTTTT-G-TTTAAT
FD941254       --> ..................................................
FD979515       --> CAAGAAGCTCGGCTTTCCCAGCTCACGTTGATTCAAGTTTTTGTTTTAAT
EW734032       --> CAAGAAGCTCGGCTTTCCCAGCTCACGTTGATTCAATTTTT.........
EX750379       --> CAAGAAGCTCGGCTTTCCCAGCTCACGTTGATTCAAGTTTTTGTTTTAAT

               751    -    801
UN19602        --> CCAACTACTTCCTTTTTGTAGATGTTAAAA-GAACAGATGAAAACAAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX759263       <-- CCAACTACTTCCTTTTTGTAGATGTTAAAA-GAACAGATGAAAACAAGAA
EX759121       <-- CCAACTACTTCCTTTTTGTAGATGTTAAAA-GAACAGATGAAACCAAGAA
EY902003       <-- CCAACTACTTCCTTTTTGTAGATGTTAAAA-GAACAGATGAAAACAAGAA
EW739231       <-- CCAACTACTTCCTTTTTGTAGATGTTAAAA-GAACAAATGAAAACAAGAA
FD975543       <-- CCAACTACTTCCTTTTTGTAGATGTTAAAAAGAACAGATGAAAACAAGAA
EY894499       <-- CCAACTACTTCCTTTTTGTAGATGTTAAAA-GAACAGATGAAAACAAGAA
EY905610       --> CCAACTACTTCCTTTTTGTAGATGTTAAA--GAACAGATGAAAAaa....
EY898438       --> ..................................................
EX754911       --> ..................................................
EX755102       --> CCAACTACTTC-TTTTTGTAGATGT-AAAA-GAACAGATGAAAc......
FD941254       --> ..................................................
FD979515       --> CCAACTACTTCCTTTTTGTAGATGTTAAAA-GA-CAGATGAAA-CA-GA-
EW734032       --> ..................................................
EX750379       --> CCAACTGCTTCCTTTTTGTAGATGTTAAAA-GAACAAATGAAAACAAGAA

               801    -    851
UN19602        --> TCATGTTTCAAAAGTTTT-CCATTCTATGTGTTCTCTCCAATGTGTTTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX759263       <-- TCATGTTTC.........................................
EX759121       <-- TCATGTTTCAAAAGTTTTTCCATTCTATGTGTTCTCTCCAATGTGTTTTA
EY902003       <-- TCATGTTTCAAAAGTTTTTCCATTCTATGTGTTCTCTCC...........
EW739231       <-- TCATGTTTCAAAAGTTTT-CCATTCTATGTGc..................
FD975543       <-- TCATGTTTCAAAAGTTTT-CC.............................
EY894499       <-- TCATGTTTCAAAAGTTTT-CCATTCTATGTGCTCCCTCCAATGTGTTTTA
EY905610       --> ..................................................
EY898438       --> ..................................................
EX754911       --> ..................................................
EX755102       --> ..................................................
FD941254       --> ..................................................
FD979515       --> TCATGTTTCAAAgttt..................................
EW734032       --> ..................................................
EX750379       --> TCATGTTTCAAAAGTTTT-CCATTCTATGTGCTCTCTCC...........

               851    -    901
UN19602        --> GAATGGCCTTTGTCAATTACCTAACAAATGAACTTCTGGATCACGTTTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX759263       <-- ..................................................
EX759121       <-- GAATGGCCTTTGTCAATTACCTAACAAATGAACTTCTGGATCACGTTTCA
EY902003       <-- ..................................................
EW739231       <-- ..................................................
FD975543       <-- ..................................................
EY894499       <-- GAATGGCCTTTGTCAATTACCTAACAAATGAACTTCTGGATCACGTTcc.
EY905610       --> ..................................................
EY898438       --> ..................................................
EX754911       --> ..................................................
EX755102       --> ..................................................
FD941254       --> ..................................................
FD979515       --> ..................................................
EW734032       --> ..................................................
EX750379       --> ..................................................

               901    -    951
UN19602        --> CATTCCC
                   ~~~~~~~
EX759263       <-- .......
EX759121       <-- CATTCCC
EY902003       <-- .......
EW739231       <-- .......
FD975543       <-- .......
EY894499       <-- .......
EY905610       --> .......
EY898438       --> .......
EX754911       --> .......
EX755102       --> .......
FD941254       --> .......
FD979515       --> .......
EW734032       --> .......
EX750379       --> .......