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Alignment for radish unigene UN19607

               1      -     51
UN19607        --> GATTCGGCCCAAAAAACAAAGCAAAATAGATCATACACTGTAACAAAATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV548869       <-- ..................................................
EY929143       <-- ..................................................
EV552442       <-- ..................................................
FD550262       <-- ..................................................
EY939129       <-- ..................................................
EV544465       --> GATTCGGCCCAAAAAACAAAGCAAAATAAATCATACACTGTAACAAAATG
EY935128       --> GATTCGGCCCAAAAA-CAAAGCAAAATAGATCATACACTGTAACAAAATG
FD546232       --> GATTCGGCCCAAAAAACAAAGCAAAATAGATCATACACTGTAACAAAATG
FD975858       --> GATTCGGCCCAAAAAACAAAGCAAAATAGATCATACACTGTAACAAAATG
EY925652       --> .................................................g
EV547360       --> ..................................................

               51     -    101
UN19607        --> AATTAGAAGAAAAACCACAACTTGCAAAATTACAGCAAAGATATCACAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV548869       <-- ..................................................
EY929143       <-- ..................................................
EV552442       <-- ..................................................
FD550262       <-- ..................................................
EY939129       <-- ..................................................
EV544465       --> AATTAAAAGAAAAACCACAACTTGCAAAATTACAGCAAAGATATCACAAG
EY935128       --> AATTAGAAGAAAAACCACAACTTGCAAAATTACAGCAAAGATATCACAAG
FD546232       --> AATTAGAAGAAAAACCACAACTTGCAAAATTACAGCAAAGATATCGCAAG
FD975858       --> GACTAGAAGAAAAACCACAACTTGCAAAATTACAGCAAAGATATCACAAG
EY925652       --> gATTAGAAGAAAAACCACAACTTGCAAAATTACAGCAAAGATATCACAAG
EV547360       --> ..................................................

               101    -    151
UN19607        --> AAACACAAGACGCACACGTACCCATATACAAAATGAACAATATTTAATGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV548869       <-- .AACACAAGACGCACACGTACCCATATACAAAATGAACAATATTTAATGA
EY929143       <-- ..................................................
EV552442       <-- ..................................................
FD550262       <-- ..................................................
EY939129       <-- ..................................................
EV544465       --> AAACACAAGACGCACACGTACCCATATACAAAATGAACAATATTTAATGA
EY935128       --> AAACACAAGACGCACACGTACCCATATACAAAATGAACAATATTTAATGA
FD546232       --> AAACACAAGACGCACACGTACCCATATACAAAATGAACAATATTTAATGA
FD975858       --> AAACACAAGACGCACACGTACCCATATACAAAATGAACAATATTTAATGA
EY925652       --> AAACACAAGACGCACACGTACCCATATACAAAATGAACAATATTTAATGA
EV547360       --> ..................................................

               151    -    201
UN19607        --> ATATAAAACCCCCCAAAGACGCGAGGGGAAAACCAATGAACCACGAGCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV548869       <-- ATATAAAACCCCCCAAAGACGCGAGGGGAAA-CCAATGAACCACGAGCAC
EY929143       <-- ..................................................
EV552442       <-- ..................................................
FD550262       <-- ..................................................
EY939129       <-- ..................................................
EV544465       --> ATATAAAACCCCCCAAAGACGCGAGGGGAAA-CCAATGAACCACGAGCAC
EY935128       --> ATATAAA-CCCCCCAAAGACGCGAGGGGATTACCAATGAACCACGAGCAC
FD546232       --> ATATAAAACCCCCCAAAGACGCGAGGGGAAAACCAATGAACCACGAGCAC
FD975858       --> ATATAAAACCCCCCAAAGACGCGAGGGGAAAACCAATGAACCACGAGCAC
EY925652       --> ATATAAAACCCCCCAAAGACGCGAGGGGAAAACCAATGAACCACGAGCAC
EV547360       --> ..................................................

               201    -    251
UN19607        --> AAAGTGGCTCGTTAGGTGTCTGGGTCGATAGGGGCACCGGTTCTAGCCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV548869       <-- AAAGTGGCTCGTTAGGTGTCTGGGTCGATAGGGGCACCGGTTCTAGCCTG
EY929143       <-- ..................................CACCGGTTCTAGCCTG
EV552442       <-- ..................................................
FD550262       <-- ..................................................
EY939129       <-- ..................................................
EV544465       --> AAAGTGGCTCGTTAGGTGTCTGGGTCGATAGGGGCACCGGTTCTAGCCTG
EY935128       --> AAAGTGGCTCGTTAGGTGTCTGGGTCGATAGGGGCACCGGTTCTAGCCTG
FD546232       --> AAAGTGGCTCGTTAGGTGTCTGGGTCGATAGGGGCACCGGTTCTAGCCTG
FD975858       --> AAAGTGGCTCGTTAGGTGTCTGGGTCGATAGGGGCACCGGTTCTAGCCTG
EY925652       --> AAAGTGGCTCGTTAGGTGTCTGGGTCGATAGGGGCACCGGTTCTAGCCTG
EV547360       --> ..................................................

               251    -    301
UN19607        --> TGAGATCCTGTTTGCGTAGATGGTCACTAGGCGAACCTGTGTGCTGTTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV548869       <-- TGAGATCCTGTTTGCGTAGATGGTCACTAGGCGAACCTG-GTGCTGTTTA
EY929143       <-- TGAGATCCTGTTTGCGTAGATGGTCACTAGGCGAACCTGTGTGCTGTTTA
EV552442       <-- ..................................................
FD550262       <-- ..................................................
EY939129       <-- ..................................................
EV544465       --> TGAGATCCTGTTTGCGTAAATGG...........................
EY935128       --> TGAGATCCTGTTTGCGTAGATGGTCACTAGGCGAACCTGTGTGCTGTTTA
FD546232       --> TGAGATCCTGTTTGCGTAGATGGTCACTAGGCGAACCTGTGTGCTGTTTA
FD975858       --> TGAGATCCTGTTTGCGTAGATGGTCACTAGGCGAACCTGTGTGCTGTTTA
EY925652       --> TGAGATCCTGTTTGCGTAGATGGTCACTAGGCGAACCTGTGTGCTGTTTA
EV547360       --> ..................................................

               301    -    351
UN19607        --> GACCTTCCAAATACGGCAAGAATGCTTTCCCAAGCATTATATATATGTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV548869       <-- GACCTTCCAAATACGGCAAGAATGCTTTCCCAAGCATTATATATATGTCT
EY929143       <-- GACCTTCCAAATACGGCAAGGATGCTTTCCCAAGCATTATATATATGTCT
EV552442       <-- .........AATACGGCAAGAATGCTTTCCCAAGCATTATATATATGTCT
FD550262       <-- ...............................................TCT
EY939129       <-- ..................................................
EV544465       --> ..................................................
EY935128       --> GACCTTCCAAATACGGCAAAAATGCTTTCCCAAGCATTATATATATGTCT
FD546232       --> GACCTTCCAAATACGGCAAGAATGCTTTCCCAAGCATTATATATATGTCT
FD975858       --> GACCTTCCAAATACGGCAAGAATGCTTTCCCAAGCATTATATATATGTCT
EY925652       --> GACCTTCCAAATACGGCAAGGATGCTTTCCCAAGCATTATATATATGTCT
EV547360       --> ..................................................

               351    -    401
UN19607        --> ACCAGACAGAACACCACTGTCTTTCGGACATCTGCACTTTGGTTCCCAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV548869       <-- ACCAGACAGAACACCACTGTCTTTCGGACATCTGCACTCTGGTTCCCACA
EY929143       <-- ACCAGACAGAACACCACTGTCTTTCGGGCATCTGCACTTTGGTTCCCAAA
EV552442       <-- ACCAGACAGAACACCACTGTCTTTCGGACATCTGCACTCTGGTTCCCAAA
FD550262       <-- ACCAGACAGAACACCACTGTCTTTCGGACATCTGCACTCTGGTTCCCAAA
EY939129       <-- ..................................................
EV544465       --> ..................................................
EY935128       --> ACCAGACAGAACACCACTGTCTTTCGGACATCTGCACTTTGGTTCCCAAA
FD546232       --> ACCAGACAGAACACCACTGTCTTTCGGACATCTGCACTCTGGTTCCCAAA
FD975858       --> ACCAGACAGAACACCACTGTCTTTCGGACATCTGCACTTTGGTTCCCAAA
EY925652       --> ACCAGACAGAACACCACTGTCTTTCGGGCATCTGCACTTTGGTTCCCAAA
EV547360       --> ..................................................

               401    -    451
UN19607        --> TGCTTCGAAAACCGCAGGCAAGAAAGAAGACAACTGATCCATTAGTTCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV548869       <-- TGCTTCGAAAACCGCAGGCAAGAAAGAAGACAACTGATCCATTAGTTCCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY929143       <-- TGCTTCGAAAACCGCAGGCAAGAAAGAAGACAACTGATCCATTAGTTCCT  Raphanus sativus var. oleiformis
EV552442       <-- TGCTTCGAAAACCGCAGGCAAGAAAGAAGACAACTGATCCATTAGTTCCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD550262       <-- TGCTTCGAAAACCGCAGGCAAGAAAGAAGACAACTGATCCATTAGTTCCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY939129       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV544465       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY935128       --> TGCTTCGAAAACCGCAGGCAAGAAAGAAGACAACTGATCCATTAGTTCCT  Raphanus sativus cv Early Scarlet Globe
FD546232       --> TGCTTCGAAAACCGCAGGCAAGAAAGAAGACAACTGATCCATTAGTTCCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD975858       --> TGCTTCGAAAACCGCAGGCAAGAAAGAAAACAACTGATCCATTAGTTCCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY925652       --> TGCTTCGAAAACCGCAGGCAAGAAAGAAGACAACTGATCCATTAGTTCCT  Raphanus sativus var. oleiformis
EV547360       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               451    -    501
UN19607        --> GTTGCGAGAGCCTACCCACAAGCTTAGTCAAGCAATTGATGCAAGCGACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV548869       <-- GTTGCGAGAGCCTACCCACAAGCTTAGTCAAGCAATTGATGCAAGCGACG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY929143       <-- CTTGCGAGAGCCTACCCACAAGCTTAGTTAAGCAATTGATGCAAGCGACG  Raphanus sativus var. oleiformis
EV552442       <-- GTTGCGAGAGCCTACCCACAAGCTTAGTCAAGCAATTGATGCAAGCGACG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD550262       <-- GTTGCGAGAGCCTACCCACAAGCTTAGTCAAGCAATTGATGCAAGCGACG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY939129       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV544465       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY935128       --> CTTGCGAGAGCCTACCCACAAGCTTAGTTAAGCAATTGATGCAAGCGACG  Raphanus sativus cv Early Scarlet Globe
FD546232       --> GTTGCGAGAGCCTACCCACAAGCTTAGTCAAGCAATTGATGCAAGCGACG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD975858       --> GTTGCGAGAGCCTACCCACAAGCTTAGTCAAGCAATTGATGCAAGCGACG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY925652       --> CTTGCGAGAGCCTACCCACAAGCTTAGTTAAGCAATTGATGCAAGCGACG  Raphanus sativus var. oleiformis
EV547360       --> .....GAGAGCCTACCCACAAGCTTAGTCAAGCAATTGATGCAAGCGACG  Raphanus raphanistrum subsp. raphanistrum (NY)

               501    -    551
UN19607        --> AGAGTTTTCTCATCTTCTGTAACCAATTGTGGCACAATAACACTTAAGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV548869       <-- AGAGTTTTCTCATCTTCTGTAACCAATTGTGGCACAATAACACTTAAGCA
EY929143       <-- AGAGTTTTCTCATCTTCTGTAACCAATTGTGGCACAATAACACTTAAGCA
EV552442       <-- AGAGTTTTCTCATCTTCTGTAACCAATTGTGGCACAATAACACTTAAGCA
FD550262       <-- AGAGTTTTCTCATCTTCTGTAACCAATTGTGGCACAATAACACTTAAGCA
EY939129       <-- ..................................................
EV544465       --> ..................................................
EY935128       --> AGAGTTTTCTCATCTTCTGTAACCAATTGTGGCACAATAACACTTAAGCA
FD546232       --> AGAGTTTTCTCATCTTCTGTAACCAATTGTGGCACAATAACACTTAAGCA
FD975858       --> AGAGTTTTCTCATCTTCTGTAACCAATTGTGGCACAATAACACTTAAGCA
EY925652       --> AGAGTTTTCTCATCTTCTGTAACCAATTGTGGCACAATAACACTTAAGCA
EV547360       --> AGAGTTTTCTCATCTTCTGTAACCAATTGTGGCACAATAACACTTAAGCA

               551    -    601
UN19607        --> TCTGAAAGGATCGTATTGGGACAAAACTGTGGTCAAACATTGCTCAGCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV548869       <-- TCTGAAAGGATCGTATTGGGACAAAACTGTGGTCAAACATTGCTCAGCTT
EY929143       <-- TCTGAAAGGATCATATTGGGACAAAACCGTGGTCAAACATTGCTCAGCTT
EV552442       <-- TCTGAAAGGATCGTATTGGGACAAAACTGTGGTCAAACATTGCTCAGCTT
FD550262       <-- TCTGAAAGGATCGTATTGGGACAAAACTGTGGTCAAACATTGCTCAGCTT
EY939129       <-- ..................................................
EV544465       --> ..................................................
EY935128       --> TCTGAAAGGATCATATTGGGACAAAGCCGTGGTCAAACATTGCTCAGCTT
FD546232       --> TCTGAAAGGATCGTATTGGGACAAAACTGTGGTCAAACATTGCTCAGCTT
FD975858       --> TCTGAAAGGATCGTATTGGGACAAAACTGTGGTCAAACATTGCTCAGCTT
EY925652       --> TCTGAAAGGATCATATTGGGACAAAACCGTGGTCAAACATTGCTCAGCTT
EV547360       --> TCTGAAAGGATCGTATTGGGACAAAACTGTGGTCAAACATTGCTCAGCTT

               601    -    651
UN19607        --> CACTGGAAACTTTTGGAATAGAGTCCTTGGAGACATGAAGCAGCTTCTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV548869       <-- CACTGGAAACTTTTGGAATAGAGTCCTTGGAGACATGAAGCAGCTTCTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY929143       <-- CACTGGAAACTTTTGGAATAGAGTCCTTCGAGACATGAAGCAGCTTCTCA  Raphanus sativus var. oleiformis
EV552442       <-- CACTGGAAACTTTTGGAATAGAGTCCTTGGAGACATGAAGCAGCTTCTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD550262       <-- CACTGGAAACTTTTGGAATAGAGTCCTTGGAGACATGAAGCAGCTTCTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY939129       <-- ......................agtCTTCGAGACATGAAGCAGCTTCTCA  Raphanus sativus cv Early Scarlet Globe
EV544465       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY935128       --> CACTGGAAACTTTTGGAATAGAGTCCTTCGAGACATGAAGCAGCTTCTCA  Raphanus sativus cv Early Scarlet Globe
FD546232       --> CACTGGAAACTTTTGGAATAGAGTCCTTGGAGACATGAAGCAGCTTCTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD975858       --> CGCTGGAAACTTTTGGAATAGAGTCCTTGGAGACATGAAGCAGCTTCTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY925652       --> CACTGGAAACTTTTGGAATAGAGTCCTTCGAGACATGAAGCAGCTTCTCA  Raphanus sativus var. oleiformis
EV547360       --> CACTGGAAACTTTTGGAATAGAGTCCTTGGAGACATGAAGCAGCTTCTCA  Raphanus raphanistrum subsp. raphanistrum (NY)

               651    -    701
UN19607        --> ATCACTATCTCAACCGAATCTTCCATGGCATCTTTCTGGCTCTTTAGCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV548869       <-- ATCACTATCTCAACCGAATCTTCCATGGCATCTTTCTGGCTCTTTAGCAT
EY929143       <-- ATCACTATCTCAACCGAATCTTCCAAGGCATCTTTCTGGCTCTTTAGCAT
EV552442       <-- ATCACTATCTCAACCGAATCTTCCATGGCATCTTTCCGGCTCTTTAGCAT
FD550262       <-- ATCACTATCTCAACCGAATCTTCCATGGCATCTTTCTGGCTCTTTAGCAT
EY939129       <-- ATCACTATCTCA-CCGAATCTTCCATGGCATCTTTCTGGCTCTTTAGCAT
EV544465       --> ..................................................
EY935128       --> ATCACTATCTCAACCGAATCTTCCATGGCATCTTTCTGGCTCTTTAGCAT
FD546232       --> ATCACTATCTCAACCGAATCTTCCATGGCATCTTTCTGGCTCTTTAGCAT
FD975858       --> ATCACTATCTCAACCGAATCTTCCATGGCATCTTTCTGGCTCTTTAGCAT
EY925652       --> ATCACTATCTCAACCGAATCTTCCAAGGCATCTTTCTGGCTCTTTAGCAT
EV547360       --> ATCACTATCTCAACCGAATCTTCCATGGCATCTTTCCGGCTCTTTAGCAT

               701    -    751
UN19607        --> TTCAGATATCAGAGAAAGAGCAACTTCTCTGACTGACAAATCTTCGTCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV548869       <-- TTCAGATATCAGAGAAAGAGCAACTTCTCTGACTGACAAATCTTCGTCAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY929143       <-- TTCAGATATCAGCGAAAGAGCAACTTCTCTGACTGACAAATCTTCGTCAT  Raphanus sativus var. oleiformis
EV552442       <-- TTCAGATATCAGAGAAAGAGCAACTTCTCTGACTGACAAATCTTCGTCAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD550262       <-- TTCAGATATCAGAGAAAGAGCAACTTCTCTGACTGACAAATCTTCGTCAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY939129       <-- TTCAGATATCAGCGAAAGAGCAACTTCTCTGACTGACAAATCTTCGTCAT  Raphanus sativus cv Early Scarlet Globe
EV544465       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY935128       --> TTCAGATATCAGCGAAAGAGCAACTTCTCTGACTGACAAATCTTCGTCAT  Raphanus sativus cv Early Scarlet Globe
FD546232       --> TTCAGATATCAGAGAAAGAGCAACTTCTCTGACTGACAAATCTTCGTCAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD975858       --> TTCAGATATCAGAGAAAGAGCAACTTCTCTGACTGACAAATCTTCGTCAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY925652       --> TTCAGATATCAGCGAAAGAGCAACTTCTCTGACTGACAAATCTTCGTCAT  Raphanus sativus var. oleiformis
EV547360       --> TTCAGATATCAGAGAAAGAGCAACTTCTCTGACTGACAAATCTTCGTCAT  Raphanus raphanistrum subsp. raphanistrum (NY)

               751    -    801
UN19607        --> CGACCACTTCAAGAACAACCGTCAATATTTGATTGAAGTACTTGGTCCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV548869       <-- CGACCACTTCAAGAACAACCGTCAATATTTGATTGAAGTACTTAGTCCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY929143       <-- CGACCACTTCAAGAACAACCGTCAATATTTGATTGAAGTACTTGGTCCAA  Raphanus sativus var. oleiformis
EV552442       <-- CGACCACTTCAAGAACAACCGTCAATATTTGATTGAAGTACTTAGTCCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD550262       <-- CGACCACTTCAAGAACAACCGTCAATATTTGATTGAAGTACTTAGTCCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY939129       <-- CGACCACTTCAAGAACAACCGTCAATATTTGATTGAAGTACTTGGTCCAA  Raphanus sativus cv Early Scarlet Globe
EV544465       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY935128       --> CGACCACTTCAAGAACAACCGTCAATATTTGATTGAAGTACTTGGTCCAA  Raphanus sativus cv Early Scarlet Globe
FD546232       --> CGACCACTT.........................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD975858       --> CGACa.............................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY925652       --> CGACCACTTCAAGAACAACCGTCAATATTTGATTGAAGTACTTGGTCCAA  Raphanus sativus var. oleiformis
EV547360       --> CGACCACTTCAAGAACAACCGTCAATATTTGATTGAAGTACTTAGTCCAA  Raphanus raphanistrum subsp. raphanistrum (NY)

               801    -    851
UN19607        --> ACTGATTCTTCGTTAGCTACAGAGGCTTCAATTAGTTGCTGGAGTCCAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV548869       <-- ACTGATTCTTCGTTAGCTACAGAGGCTTCAATTAGTTGCTGGAGTCCAGA
EY929143       <-- ACTGATTCTTCGTTAGCTACAGAGGCTTCAATTAGTTGCTGGAGTCCAGA
EV552442       <-- ACTGATTCTTCGTTAGCTACAGAG-CTTCAATTAGTTGCTGGAGTCCAGA
FD550262       <-- ACTGATTCTTCGTTAGCTACAGGGGCTTCAATTAGTTGCTGGAGTCCAGA
EY939129       <-- ACTGATTCTTCGTTAGCTACAGAGGCTTCAATTAGTTGCTGGAGTCCAGA
EV544465       --> ..................................................
EY935128       --> ACTGATTCTTCGTTAGCTACAGAG-CTTCAAT-AGTTGCTGGAGTC....
FD546232       --> ..................................................
FD975858       --> ..................................................
EY925652       --> ACTGATTCTTCGTTAGCTACAGAGctt.......................
EV547360       --> ACTGATTCTTCGTTAGCTACAGA...........................

               851    -    901
UN19607        --> TATCTTGCTTGAAGAAGGGCTTCCATCACTCGCATTGATCATATGTAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV548869       <-- TATCTTGCTTGAAGAAGGGCTTCCATCACTCGCATTGATCATc.......
EY929143       <-- TATCTTGCTTGAAGAAGGGCTTCCAc........................
EV552442       <-- TATCTTGCTTGAAGAAGGGCTTCCATCACTCGCATTGATCATATGTAGAA
FD550262       <-- TATCTTGCTTGAAGAAGGGCTTCCATCACTCGCATTGATCATATGTAGAA
EY939129       <-- TATCTTGCTTGAAGAAGGGCTTCCATCACTCGCATTGATCATATGTAGAA
EV544465       --> ..................................................
EY935128       --> ..................................................
FD546232       --> ..................................................
FD975858       --> ..................................................
EY925652       --> ..................................................
EV547360       --> ..................................................

               901    -    951
UN19607        --> TCTGAGGAATGCTAGGTCCAGATTCCGGTGTTGGGCTAACCTTAATAGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV548869       <-- ..................................................
EY929143       <-- ..................................................
EV552442       <-- TCTGAGGAATGCTAAGTCCAGATTCCAGTGTTGGGCTAACCTTAATAGAT
FD550262       <-- TCTGAGGAATGCTAGGTCCAGATTCCGGTGTTGGGCTAACCTTAATAGAT
EY939129       <-- TCTGAGGAATGCTAGGTCCAGATTCCGGTGTTGGACTAACCTTAATAGAT
EV544465       --> ..................................................
EY935128       --> ..................................................
FD546232       --> ..................................................
FD975858       --> ..................................................
EY925652       --> ..................................................
EV547360       --> ..................................................

               951    -   1001
UN19607        --> GAGAGTATGTATTGACTCAAATCTAATTCGCGGGAAACCTCATTTTCATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV548869       <-- ..................................................
EY929143       <-- ..................................................
EV552442       <-- GAGAGTATGTATTGACTCAAATCTAATTCGCGGGAA..............
FD550262       <-- GAGAGTATGTATTGACTCAAATCTAATTCGCGGGAAACCTCATTTTCATG
EY939129       <-- GAGAGCATGTAATGACTCAAATCTAATTCGCGGGAAACCTCATTTTCATG
EV544465       --> ..................................................
EY935128       --> ..................................................
FD546232       --> ..................................................
FD975858       --> ..................................................
EY925652       --> ..................................................
EV547360       --> ..................................................

               1001   -   1051
UN19607        --> TCTTTCTTCCATGGAATCAGCGTTTGTCATATTCATACCATTCTTCTCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV548869       <-- ..................................................
EY929143       <-- ..................................................
EV552442       <-- ..................................................
FD550262       <-- TCTTTCTTCCATGGAATCAGCGTTTGTCATATTCAGACCATTCTTCTCTc
EY939129       <-- TCTTTCTTCCATGGAATCAGCGTTTGTCATATTCATACCATTCTTCTCTA
EV544465       --> ..................................................
EY935128       --> ..................................................
FD546232       --> ..................................................
FD975858       --> ..................................................
EY925652       --> ..................................................
EV547360       --> ..................................................

               1051   -   1101
UN19607        --> AACGTGGTGGAGATAAGCTATCAAAGTTTTCAACCTTGTCTGAGCTTCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV548869       <-- ..................................................
EY929143       <-- ..................................................
EV552442       <-- ..................................................
FD550262       <-- ..................................................
EY939129       <-- AACGTGGTGGAGATAAGCTATCAAAGTTTTCAACCTTGTCTGAGCTTCCA
EV544465       --> ..................................................
EY935128       --> ..................................................
FD546232       --> ..................................................
FD975858       --> ..................................................
EY925652       --> ..................................................
EV547360       --> ..................................................

               1101   -   1151
UN19607        --> TTAGGGCTAGTTCTTGATATCAAATTCTGACCAGCTGAAGTAAACGTGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV548869       <-- ..................................................
EY929143       <-- ..................................................
EV552442       <-- ..................................................
FD550262       <-- ..................................................
EY939129       <-- TTAGGGCTAGTTCTTGATATCAAATTCTGACCAGCTGAAGTAAACGTGTA
EV544465       --> ..................................................
EY935128       --> ..................................................
FD546232       --> ..................................................
FD975858       --> ..................................................
EY925652       --> ..................................................
EV547360       --> ..................................................

               1151   -   1201
UN19607        --> ATCAGAATCCTTTTGGTTCAACACATCACTAGCAGAACTTATCCCACTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV548869       <-- ..................................................
EY929143       <-- ..................................................
EV552442       <-- ..................................................
FD550262       <-- ..................................................
EY939129       <-- ATCAGAATCCTTTTGGTTCAACACATCACTAGCAGAACTTATCCCACTTC
EV544465       --> ..................................................
EY935128       --> ..................................................
FD546232       --> ..................................................
FD975858       --> ..................................................
EY925652       --> ..................................................
EV547360       --> ..................................................

               1201   -   1251
UN19607        --> TGAAGTTGTGATACAGCTTTTCCTGAGTTCCACTGTAAACACTTTGACCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV548869       <-- ..................................................
EY929143       <-- ..................................................
EV552442       <-- ..................................................
FD550262       <-- ..................................................
EY939129       <-- TGAAGTTGTGATACAGCTTTTCCTGAGTTCCACTGTAAACACTTTGACCA
EV544465       --> ..................................................
EY935128       --> ..................................................
FD546232       --> ..................................................
FD975858       --> ..................................................
EY925652       --> ..................................................
EV547360       --> ..................................................

               1251   -   1301
UN19607        --> ACAACACCACCAGTGACCGTTGTTGGCTCCTGTGAAGAACTCCACTTCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV548869       <-- ..................................................
EY929143       <-- ..................................................
EV552442       <-- ..................................................
FD550262       <-- ..................................................
EY939129       <-- ACAACACCACCAGTGACCGTTGTTGGCTCCTGTGAAGAACTCCACTTCCT
EV544465       --> ..................................................
EY935128       --> ..................................................
FD546232       --> ..................................................
FD975858       --> ..................................................
EY925652       --> ..................................................
EV547360       --> ..................................................

               1301   -   1351
UN19607        --> ACCACTATCACTGTCAACGGAACCCCCAGAATACCTGCCAAGGAACATAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV548869       <-- ..................................................
EY929143       <-- ..................................................
EV552442       <-- ..................................................
FD550262       <-- ..................................................
EY939129       <-- ACCACTATCACTGTCAACGGAACCCCCAGAATACCTGCCAAGGAACATAT
EV544465       --> ..................................................
EY935128       --> ..................................................
FD546232       --> ..................................................
FD975858       --> ..................................................
EY925652       --> ..................................................
EV547360       --> ..................................................

               1351   -   1401
UN19607        --> TCTTCC
                   ~~~~~~
EV548869       <-- ......
EY929143       <-- ......
EV552442       <-- ......
FD550262       <-- ......
EY939129       <-- TCTTCC
EV544465       --> ......
EY935128       --> ......
FD546232       --> ......
FD975858       --> ......
EY925652       --> ......
EV547360       --> ......