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Alignment for radish unigene UN19608

               0      -     50
UN19608        --> .GGAAACTACTTCAAACCGACAAGATGGAGAAGATGAAAGTGGTGGCTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD546926       <-- .GGAAACTACTTCAAACCGACAAGATGGAGAAGATGAAAGTGGTGGCTTT
FD943046       <-- .GGAAACTACTTCAAACCGACAAGATGGAGAAGATGAAAGTGGTGGCTTT
FD958540       <-- .GGAAACTACTTCAAACCGACAAGATGGAGAAGATGAAAGTGGTGGCTTT
EX775921       <-- ..GAAACTACTTCAAACCGACAAGATGGAGAAGATGAAAGTGGTGGCTTT
EX752087       <-- gacAAACTACTTCAAACCGACAAGATGGAGGAGATGAAAGTGGTGGCTTT
EW727997       <-- ......ggACTTCAAACCGACAAGATGGAGAAGATGAAAGTGGTGGCTTT
EV536812       <-- ..................................................
EV537942       <-- ..................................................
FD551053       --> .GGAAACTACTTCAAACCGACAAGATGGAGAAGATGAAAGTGGTGGCTTT
FD947036       --> .GGAAACTACTTCAAACCGACAAGATGGAGAAGATGAAAGTGGTGGCTTT
FD961864       --> .GGAAACTACTTCAAACCGACAAGATGGAGAAGATGAAAGTGGTGGCTTT
EX771838       --> ..GAAACTACTTCAAACCGACAAGATGGAGAAGATGAAAGTGGTGGCTTT
EX748031       --> gacAAACTACTTCAAACCGACAAGATGGAGGAGATGAAAGTGGTGGCTTT
EW723930       --> ......ggACTTCAAACCGACAAGATGGAGAAGATGAAAGTGGTGGCTTT
FY454583       --> ..................................................
EX749345       --> ..................................................
EV541176       --> ..................................................
EV542069       --> ..................................................

               50     -    100
UN19608        --> TGTTATGCTCATCTCTCTTCTTCAGCTTTCTCAGGTACTCGCAGATGCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD546926       <-- TGTTATGCTCATCTCTCTTCTTCAGCTTTCTCAGGTACTCGCAGATGCAT
FD943046       <-- TGTTATGCTCATCTCTCTTCTTCAGCTTTCTCAGGTACTCGCAGATGCAT
FD958540       <-- TGTTATGCTCATCTCTCTTCTTCAGCTTTCTCAGGTACTCGCAGATGCAT
EX775921       <-- TGTTATGCTCATCTCTCTTCTTCAGCTTTCTCAGGTACTCGCAGATGCAT
EX752087       <-- TGTTATGCTCATCTCTCTTCTTCAGCTTTCTCAGGTACTCGCAGATGCAT
EW727997       <-- TGTTATGCTCATCTCTCTTCTTCAGCTTTCTCAGGTACTCGCAGATGCAT
EV536812       <-- ..................................................
EV537942       <-- ..................................................
FD551053       --> TGTTATGCTCATCTCTCTTCTTCAGCTTTCTCAGGTACTCGCAGATGCAT
FD947036       --> TGTTATGCTCATCTCTCTTCTTCAGCTTTCTCAGGTACTCGCAGATGCAT
FD961864       --> TGTTATGCTCATCTCTCTTCTTCAGCTTTCTCAGGTACTCGCAGATGCAT
EX771838       --> TGTTATGCTCATCTCTCTTCTTCAGCTTTCTCAGGTACTCGCAGATGCAT
EX748031       --> TGTTATGCTCATCTCTCTTCTTCAGCTTTCTCAGGTACTCGCAGATGCAT
EW723930       --> TGTTATGCTCATCTCTCTTCTTCAGCTTTCTCAGGTACTCGCAGATGCAT
FY454583       --> ......GCTCATCTCTCTTCTTCAGCTTTCTCAGGTACTCGCAGATGCAT
EX749345       --> ..................................................
EV541176       --> ..................................................
EV542069       --> ..................................................

               100    -    150
UN19608        --> CTTCACCCAGCAACGGTGAAACTTCCTCTCTTTCTCAGATTCAGATGAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD546926       <-- CTTCACCCAGCAACGGTGAAACTTCCTCTCTTTCTCAGATTCAGATGAAC
FD943046       <-- CTTCACCCAGCAACGGTGAAACTTCCTCTCTTTCTCAGATTCAGATGAAC
FD958540       <-- CTTCACCCAGCAACGGTGAAACTTCCTCTCTTTCTCAGATTCAGATGAAC
EX775921       <-- CTTCACTCAGCAACGGTGAAACTTCCTCTCTTTCTCAGATTCAGATGAAC
EX752087       <-- CTTCACCCAGCAACGGTGAAACTTCCTCTCTTTCTCAGATTCAGATGAAC
EW727997       <-- CTTCACCCAGCAACGGTGAAACTTCCCCTCTTTCTCAGATTCAGATGAAC
EV536812       <-- ..................................................
EV537942       <-- ..................................................
FD551053       --> CTTCACCCAGCAACGGTGAAACTTCCTCTCTTTCTCAGATTCAGATGAAC
FD947036       --> CTTCACCCAGCAACGGTGAAACTTCCTCTCTTTCTCAGATTCAGATGAAC
FD961864       --> CTTCACCCAGCAACGGTGAAACTTCCTCTCTTTCTCAGATTCAGATGAAC
EX771838       --> CTTCACTCAGCAACGGTGAAACTTCCTCTCTTTCTCAGATTCAGATGAAC
EX748031       --> CTTCACCCAGCAACGGTGAAACTTCCTCTCTTTCTCAGATTCAGATGAAC
EW723930       --> CTTCACCCAGCAACGGTGAAACTTCCCCTCTTTCTCAGATTCAGATGAAC
FY454583       --> CTTCACCCAGCAACGGTGAAACTTCCTCTCTTTCTCAGATTCAGATGAAC
EX749345       --> ..................................................
EV541176       --> ..................................................
EV542069       --> ..................................................

               150    -    200
UN19608        --> GACGAGAACCAAGAGGAGGCTTTTAAGAGAACATATCACCGTCCACGATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD546926       <-- GACGAGAACCAAGAGGAGGCTTTTAAGAGAACATATCACCGTCCACGATT
FD943046       <-- GACGAGAACCAAGAGGAGGCTTTTAAGAGAACATATCACCGTCCACGATT
FD958540       <-- GACGAGAACCAAGAGGAGGCTTTTAAGAGAACATATCACCGTCCACGATT
EX775921       <-- GACGAGAACCAAGAGGAGGCTTTTAAGAGAACATATCACCGTCCACGATT
EX752087       <-- GACGAGAACCAAGAGGAGGCTTTTAAGAGAACATATCACCGTCCACGATT
EW727997       <-- GACGAGAACCAAGAGGAGGCTTTTAAGAGAACATATCACCGTCCACGATT
EV536812       <-- ..................................................
EV537942       <-- ..................................................
FD551053       --> GACGAGAACCAAGAGGAGGCTTTTAAGAGAACATATCACCGTCCACGATT
FD947036       --> GACGAGAACCAAGAGGAGGCTTTTAAGAGAACATATCACCGTCCACGATT
FD961864       --> GACGAGAACCAAGAGGAGGCTTTTAAGAGAACATATCACCGTCCACGATT
EX771838       --> GACGAGAACCAAGAGGAGGCTTTTAAGAGAACATATCACCGTCCACGATT
EX748031       --> GACGAGAACCAAGAGGAGGCTTTTAAGAGAACATATCACCGTCCACGATT
EW723930       --> GACGAGAACCAAGAGGAGGCTTTTAAGAGAACATATCACCGTCCACGATT
FY454583       --> GACGAGAACCAAGAGGAGGCTTTTAAGAGAACATATCACCGTCCACGATT
EX749345       --> ..................................................
EV541176       --> ..................................................
EV542069       --> ..................................................

               200    -    250
UN19608        --> CAATTGTGGGTCTGCCTGCGCTAGGAGATGCAGAGAGACGTCGAGGAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD546926       <-- CAATTGTGGGTCTGCCTGCGCGAGGAGATGCAGAGAGACGTCGAGGAAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD943046       <-- CAATTGTGGGTCTGCCTGCGCGAGGAGATGCAGAGAGACGTCGAGGAAGA  Raphanus sativus cv Early Scarlet Globe
FD958540       <-- CAATTGTGGGTCTGCCTGCGCTAGGAGATGCAGAGAGACGTCGAGGAAGA  Raphanus raphanistrum subsp. maritimus
EX775921       <-- CAATTGTGGGTCTGCCTGCGCTAGGAGATGCAGAGAGACGTCGAGGAAGA  Raphanus raphanistrum subsp. landra
EX752087       <-- CAATTGTGGGTCTGCCTGCGCTAGGAGATGCAGAGAGACGTCGAGGAAGA  Raphanus raphanistrum subsp. maritimus
EW727997       <-- CAATTGTGGGTCTGCCTGCGCTAGGAGATGCAGAGAGACGTCGAGGAAGA  Raphanus sativus cv Early Scarlet Globe
EV536812       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV537942       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD551053       --> CAATTGTGGGTCTGCCTGCGCGAGGAGATGCAGAGAGACGTCGAGGAAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD947036       --> CAATTGTGGGTCTGCCTGCGCGAGGAGATGCAGAGAGACGTCGAGGAAGA  Raphanus sativus cv Early Scarlet Globe
FD961864       --> CAATTGTGGGTCTGCCTGCGCTAGGAGATGCAGAGAGACGTCGAGGAAGA  Raphanus raphanistrum subsp. maritimus
EX771838       --> CAATTGTGGGTCTGCCTGCGCTAGGAGATGCAGAGAGACGTCGAGGAAGA  Raphanus raphanistrum subsp. landra
EX748031       --> CAATTGTGGGTCTGCCTGCGCTAGGAGATGCAGAGAGACGTCGAGGAAGA  Raphanus raphanistrum subsp. maritimus
EW723930       --> CAATTGTGGGTCTGCCTGCGCTAGGAGATGCAGAGAGACGTCGAGGAAGA  Raphanus sativus cv Early Scarlet Globe
FY454583       --> CAATTGTGGGTCTGCCTGCGCTAGGAGATGCAGAGAGACGTCGAGGAAGA  Raphanus sativus cv GSK3-1
EX749345       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV541176       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542069       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               250    -    300
UN19608        --> AAGTGTGTTACAGAGCTTGTGGAAGTTGCTGCGCAAAATGTCAGTGCGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD546926       <-- AAGTGTGTTACAGAGCTTGTGGAAGTTGCTGCGCAAAATGTCAGTGCGTA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD943046       <-- AAGTGTGTTACAGAGCTTGTGGAAGTTGCTGCGCAAAATGTCAGTGCGTG  Raphanus sativus cv Early Scarlet Globe
FD958540       <-- AAGTGTGTTACAGAGCTTGTGGAAGTTGCTGCGCAAAATGTCAGTGCGTA  Raphanus raphanistrum subsp. maritimus
EX775921       <-- AAGTGTGTTACAGAGCTTGTGGAAGTTGCTGCGCAAAATGTCAGTGCGTG  Raphanus raphanistrum subsp. landra
EX752087       <-- AAGTGTGTTACAGAGCTTGTGGAAGTTGCTGCGCAAAATGTCAGTGCGTA  Raphanus raphanistrum subsp. maritimus
EW727997       <-- AAGTGTGTTACAGAGCTTGTGGAAGTTGCTGCGCAAAATGTCAGTGCGTA  Raphanus sativus cv Early Scarlet Globe
EV536812       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV537942       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD551053       --> AAGTGTGTTACAGAGCTTGTGGAAGTTGCTGCGCAAAATGTCAGTGCGTA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD947036       --> AAGTGTGTTACAGAGCTTGTGGAAGTTGCTGCGCAAAATGTCAGTGCGTG  Raphanus sativus cv Early Scarlet Globe
FD961864       --> AAGTGTGTTACAGAGCTTGTGGAAGTTGCTGCGCAAAATGTCAGTGCGTA  Raphanus raphanistrum subsp. maritimus
EX771838       --> AAGTGTGTTACAGAGCTTGTGGAAGTTGCTGCGCAAAATGTCAGTGCGTG  Raphanus raphanistrum subsp. landra
EX748031       --> AAGTGTGTTACAGAGCTTGTGGAAGTTGCTGCGCAAAATGTCAGTGCGTA  Raphanus raphanistrum subsp. maritimus
EW723930       --> AAGTGTGTTACAGAGCTTGTGGAAGTTGCTGCGCAAAATGTCAGTGCGTA  Raphanus sativus cv Early Scarlet Globe
FY454583       --> AAGTGTGTTACAGAGCTTGTGGAAGTTGCTGCGCAAAATGTCAGTGCGTG  Raphanus sativus cv GSK3-1
EX749345       --> ...............CTTGTGGAAGTTGCTGCGCAAAATGTCAGTGCGTA  Raphanus raphanistrum subsp. maritimus
EV541176       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542069       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               300    -    350
UN19608        --> CCGCCGGGGACCTCAGGCAACACAGCATCATGTCCTTGCTACGCTAATCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD546926       <-- CCGCCGGGGACCTCAGGCAACACAGCATCATGTCCTTGCTACGCTAATCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD943046       <-- CCGCCCGGAACCTCAGGCAACACAGCATCATGTCCTTGCTACGCTAATCT  Raphanus sativus cv Early Scarlet Globe
FD958540       <-- CCGCCGGGGACCTCAGGCAACACAGCATCATGTCCTTGCTACGCTAATCT  Raphanus raphanistrum subsp. maritimus
EX775921       <-- CCGCCCGGAACCTCAGGCAACACAGCATCATGTCCTTGCTACGCTAATCT  Raphanus raphanistrum subsp. landra
EX752087       <-- CCGCCGGGGACCTCAGGCAACACAGCATCATGTCCTTGCTACGCTAATCT  Raphanus raphanistrum subsp. maritimus
EW727997       <-- CCGCCGAGGACCTCAGGCAACACAGCATCATGTCCTTGCTACGCTAATCT  Raphanus sativus cv Early Scarlet Globe
EV536812       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV537942       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD551053       --> CCGCCGGGGACCTCAGGCAACACAGCATCATGTCCTTGCTACGCTAATCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD947036       --> CCGCCCGGAACCTCAGGCAACACAGCATCATGTCCTTGCTACGCTAATCT  Raphanus sativus cv Early Scarlet Globe
FD961864       --> CCGCCGGGGACCTCAGGCAACACAGCATCATGTCCTTGCTACGCTAATCT  Raphanus raphanistrum subsp. maritimus
EX771838       --> CCGCCCGGAACCTCAGGCAACACAGCATCATGTCCTTGCTACGCTAATCT  Raphanus raphanistrum subsp. landra
EX748031       --> CCGCCGGGGACCTCAGGCAACACAGCATCATGTCCTTGCTACGCTAATCT  Raphanus raphanistrum subsp. maritimus
EW723930       --> CCGCCGAGGACCTCAGGCAACACAGCATCATGTCCTTGCTACGCTAATCT  Raphanus sativus cv Early Scarlet Globe
FY454583       --> CCGCCCGGAACCTCAGGCAACACAGCATCATGTCCTTGCTACGCTAATCT  Raphanus sativus cv GSK3-1
EX749345       --> CCGCCGGGTACCTCAGGCAACACAGCATCATGTCCTTGCTACGCTAATCT  Raphanus raphanistrum subsp. maritimus
EV541176       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542069       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               350    -    400
UN19608        --> CCGTACACATGGCAATAAGCTCAAGTGTCCTTGAGACTACAAAAAAACCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD546926       <-- CCGTACACATGGCAATAAGCTCAAGTGTCCTTGAGACTACAAAAAAACCT
FD943046       <-- CCGTACACATGGCAATAATCTCAAGTGTCCTTGAGACTACAAAAAAACCT
FD958540       <-- CCGTACACATGGCAATAAGCTCAAGTGTCCTTGAGACTACAAAAAAACCT
EX775921       <-- CCGTACACATGGCAATAAGCTCAAGTGTCCTTGAGACTACAAAAAAACCT
EX752087       <-- CCGTACACATGGCAATAAGCTCAAGTGTCCTTGAGACTACAAAAAAACCT
EW727997       <-- CCGTACACATGGCAATAAGCTCAAGTGTCCTTGAGACTACAAAAAAACCT
EV536812       <-- ..................................................
EV537942       <-- ..................................................
FD551053       --> CCGTACACATGGCAATAAGCTCAAGTGTCCTTGAGACTACAAAAAAACCT
FD947036       --> CCGTACACATGGCAATAATCTCAAGTGTCCTTGAGACTACAAAAAAACCT
FD961864       --> CCGTACACATGGCAATAAGCTCAAGTGTCCTTGAGACTACAAAAAAACCT
EX771838       --> CCGTACACATGGCAATAAGCTCAAGTGTCCTTGAGACTACAAAAAAACCT
EX748031       --> CCGTACACATGGCAATAAGCTCAAGTGTCCTTGAGACTACAAAAAAACCT
EW723930       --> CCGTACACATGGCAATAAGCTCAAGTGTCCTTGAGACTACAAAAAAACCT
FY454583       --> CCGTACACATGGCAATAAGCTCAAGTGTCCTTGAGACTACAAAAAAACCT
EX749345       --> CCGTACACATGGCAATAAGCTCAAGTGTCCTTGAGACTACAAAAAAACCT
EV541176       --> ..................................................
EV542069       --> ..................................................

               400    -    450
UN19608        --> CTATGTTACATGCTCTGATCATCTTCTAGCTAATAAACTATATGTTTGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD546926       <-- CTATGTTACATGCTCTGGTCATCTTCTAGCTAATAAACTATATGTTTGCT
FD943046       <-- CTATGTTACATGCTCTGATCATCTTCTAGCTAATAAACTATATGTTTGCT
FD958540       <-- CTATGTTACATGCTCTGATCATCTTCTAGCTAATAAACTATATGTTTGCT
EX775921       <-- CTATGTTACATGCTCTGATCATCTTCTAGCTAATAAACTATATGTTTGCT
EX752087       <-- CTATGTTACATGCTCTGATCATCTTCTAGCTAATAAACTATATGTTTGCT
EW727997       <-- CTATGTTACATGCTCTGAACATCTTCTAGCTGATAAACTATATGTTTGCT
EV536812       <-- ..................................................
EV537942       <-- ..................................................
FD551053       --> CTATGTTACATGCTCTGGTCATCTTCTAGCTAATAAACTATATGTTTGCT
FD947036       --> CTATGTTACATGCTCTGATCATCTTCTAGCTAATAAACTATATGTTTGCT
FD961864       --> CTATGTTACATGCTCTGATCATCTTCTAGCTAATAAACTATATGTTTGCT
EX771838       --> CTATGTTACATGCTCTGATCATCTTCTAGCTAATAAACTATATGTTTGCT
EX748031       --> CTATGTTACATGCTCTGATCATCTTCTAGCTAATAAACTATATGTTTGCT
EW723930       --> CTATGTTACATGCTCTGAACATCTTCTAGCTGATAAACTATATGTTTGCT
FY454583       --> CTATGTTACATGCTCTGATCATCTTCTAGCTAATAAACTATATGTTTGCT
EX749345       --> CTATGTTACATGCTCTGGTCATCTTCTAGCTAATAAACTATATGTTTGCT
EV541176       --> ..................................................
EV542069       --> ..................................................

               450    -    500
UN19608        --> TCTATTGTATCTTGTGTGAGCTTATATATTTCCCATTATGTTGC--CATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD546926       <-- TCTATTGTATCTTGTGTGAGCTTATATATTTCCCATTATGCTGC--CATT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD943046       <-- TCTATTGTATCTTGTGTGAGCTTATATATTTCCCATTATTCTGC--CATT  Raphanus sativus cv Early Scarlet Globe
FD958540       <-- TCTATTGTATCTTGTGTGAGCTTATATATTTCCCATTATGTTGC--CATT  Raphanus raphanistrum subsp. maritimus
EX775921       <-- TCTATTGTATCTCGTGTGAGCTTATATATATCCTATTATGTTGCGCCATT  Raphanus raphanistrum subsp. landra
EX752087       <-- TCTATTGTATCTTGTGTGAGCTTATATATTTCCCATTATGTTGC--CATT  Raphanus raphanistrum subsp. maritimus
EW727997       <-- TCTATTGTATCTTGTGTGAGCTTATATATTTCCCATTATGTTGC--CATT  Raphanus sativus cv Early Scarlet Globe
EV536812       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV537942       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD551053       --> TCTATTGTATCTTGTGTGAGCTTATATATTTCCCATTATGCTGC--CATT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD947036       --> TCTATTGTATCTTGTGTGAGCTTATATATTTCCCATTATTCTGC--CATT  Raphanus sativus cv Early Scarlet Globe
FD961864       --> TCTATTGTATCTTGTGTGAGCTTATATATTTCCCATTATGTTGC--CATT  Raphanus raphanistrum subsp. maritimus
EX771838       --> TCTATTGTATCTCGTGTGAGCTTATATATATCCTATTATGTTGCGCCATT  Raphanus raphanistrum subsp. landra
EX748031       --> TCTATTGTATCTTGTGTGAGCTTATATATTTCCCATTATGTTGC--CATT  Raphanus raphanistrum subsp. maritimus
EW723930       --> TCTATTGTATCTTGTGTGAGCTTATATATTTCCCATTATGTTGC--CATT  Raphanus sativus cv Early Scarlet Globe
FY454583       --> TCTATTGTATCTCGTGTGAGCTTATATATATCCTATTATGTTGCGCCATT  Raphanus sativus cv GSK3-1
EX749345       --> TCTATTGTATCTTGTGTGAGCTTATATATTTCCCATTATGCTGC--CATT  Raphanus raphanistrum subsp. maritimus
EV541176       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542069       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               500    -    550
UN19608        --> ATTCAAAACATTGTAATCGATTTCC-GAATAATAAGATGAGTGATTTTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD546926       <-- ATTCAAAACATTGTA-TCGATTTCC-GAATAATAAGATGAGTGATTTTAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD943046       <-- ATTCAAAACATTGTA-TCGATTTCC-GAATAATAAGATGAGTGATTTTAT  Raphanus sativus cv Early Scarlet Globe
FD958540       <-- ATTCAAAACATTGTAATCGATTTCC-GAATAATAAGATGAGTGATTT-AT  Raphanus raphanistrum subsp. maritimus
EX775921       <-- ATTCAAAACATTGTAATCGATTTCCCGAATAATAAGATG...........  Raphanus raphanistrum subsp. landra
EX752087       <-- ATTCAAAACATTGTAATCGATTTCC-GAATAATAAGATGAGTGATTT-AT  Raphanus raphanistrum subsp. maritimus
EW727997       <-- ATTCAAAACATTGTAATCGATTTCC-GAATAATAAGATGAGTGATTTatt  Raphanus sativus cv Early Scarlet Globe
EV536812       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV537942       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD551053       --> ATTCAAAACATTGTA-TCGATTTCC-GAATAATAAGATGAGTGATTTTAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD947036       --> ATTCAAAACATTGTA-TCGATTTCC-GAATAATAAGATGAGTGATTTTAT  Raphanus sativus cv Early Scarlet Globe
FD961864       --> ATTCAAAACATTGTAATCGATTTCC-GAATAATAAGATGAGTGATTT-AT  Raphanus raphanistrum subsp. maritimus
EX771838       --> ATTCAAAACATTGTAATCGATTTCCCGAATAATAAGATG...........  Raphanus raphanistrum subsp. landra
EX748031       --> ATTCAAAACATTGTAATCGATTTCC-GAATAATAAGATGAGTGATTT-AT  Raphanus raphanistrum subsp. maritimus
EW723930       --> ATTCAAAACATTGTAATCGATTTCC-GAATAATAAGATGAGTGATTTatt  Raphanus sativus cv Early Scarlet Globe
FY454583       --> ATTCAAAACATTGTAATCGATTTCCCGAATAATAAGATGAGTGATTTTAT  Raphanus sativus cv GSK3-1
EX749345       --> ATTCAAAACATTGTA-TCGATTTCC-GAATAATAAGATGAGTGATTTTAT  Raphanus raphanistrum subsp. maritimus
EV541176       --> ..............AATCGATTTCC-GAATAATAAGATGAGTGATTTTAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542069       --> .......................CC-GAATAATAA--TGAGTGATTTTAT  Raphanus raphanistrum subsp. raphanistrum (MS)

               550    -    600
UN19608        --> TGTTTAAGAGTAAACAAAAGCAGGAAACAAGTTTTCATATTCATAATAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD546926       <-- TGT...............................................
FD943046       <-- TGTT..............................................
FD958540       <-- TGTTT.............................................
EX775921       <-- ..................................................
EX752087       <-- TGTTT.............................................
EW727997       <-- ..................................................
EV536812       <-- ..................................................
EV537942       <-- ..................................................
FD551053       --> TGT...............................................
FD947036       --> TGTTaaaaaa........................................
FD961864       --> TGTTTAAaaaaa......................................
EX771838       --> ..................................................
EX748031       --> TGTTT.............................................
EW723930       --> ..................................................
FY454583       --> TGTTT.............................................
EX749345       --> TGT...............................................
EV541176       --> TGTTTAAGAGTAAACAAAAGCAGGAAACAAGTTTTCATATTCATAATAGT
EV542069       --> TGTTTAAGAGTAAACAAAAGCAGGAAACAAGTTTTCATATTCATAATAGT

               600    -    650
UN19608        --> AACACAAAATGTCCTTACAAAATAACATCACCGTTTATTGGTTTCTTCGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD546926       <-- ..................................................
FD943046       <-- ..................................................
FD958540       <-- ..................................................
EX775921       <-- ..................................................
EX752087       <-- ..................................................
EW727997       <-- ..................................................
EV536812       <-- ..................................................
EV537942       <-- ..................................................
FD551053       --> ..................................................
FD947036       --> ..................................................
FD961864       --> ..................................................
EX771838       --> ..................................................
EX748031       --> ..................................................
EW723930       --> ..................................................
FY454583       --> ..................................................
EX749345       --> ..................................................
EV541176       --> AACACAAAATGTCCTTACAAAATAACATCACCGTTTATTGGTTTCTTCGT
EV542069       --> AACACAAAATGTCCTTACAAAATAACATCACCGTTTATTGGTTTCTTCGT

               650    -    700
UN19608        --> CACCGTTTCTTGGACTTAACCGCCACAACGTCTTTATAGAGCTTAACGCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD546926       <-- ..................................................
FD943046       <-- ..................................................
FD958540       <-- ..................................................
EX775921       <-- ..................................................
EX752087       <-- ..................................................
EW727997       <-- ..................................................
EV536812       <-- ..................................................
EV537942       <-- ..................................................
FD551053       --> ..................................................
FD947036       --> ..................................................
FD961864       --> ..................................................
EX771838       --> ..................................................
EX748031       --> ..................................................
EW723930       --> ..................................................
FY454583       --> ..................................................
EX749345       --> ..................................................
EV541176       --> CACCGTTTCTTGGACTTAACCGCCACAACGTCTTTATAGAGCTTAACGCG
EV542069       --> CACCGTTTCTTGGACTTAACCGCCACAACGTCTTTATAGAGCTTAACGCG

               700    -    750
UN19608        --> ATCCTTCAACGCATCTCTTCGAGGCCGAGCCACCTTGTTGTTCGGATCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD546926       <-- ..................................................
FD943046       <-- ..................................................
FD958540       <-- ..................................................
EX775921       <-- ..................................................
EX752087       <-- ..................................................
EW727997       <-- ..................................................
EV536812       <-- ..................................................
EV537942       <-- ..................................................
FD551053       --> ..................................................
FD947036       --> ..................................................
FD961864       --> ..................................................
EX771838       --> ..................................................
EX748031       --> ..................................................
EW723930       --> ..................................................
FY454583       --> ..................................................
EX749345       --> ..................................................
EV541176       --> ATCCTTCAACGCATCTCTTCGAGGCCGAGCCACCTTGTTGTTCGGATCAA
EV542069       --> ATCCTTCAACGCATCTCTTCGAGGCCGAGCCACCTTGTTGTTCGGATCAA

               750    -    800
UN19608        --> ACAACAAAACCTCTTCAAACGCTTTCAACGCCAAAGGCAGCTCCTTCTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD546926       <-- ..................................................
FD943046       <-- ..................................................
FD958540       <-- ..................................................
EX775921       <-- ..................................................
EX752087       <-- ..................................................
EW727997       <-- ..................................................
EV536812       <-- ..............TCAAACGCTT-CAACGCCAAAGGCAGCTC-TTCTTC
EV537942       <-- ................................................TC
FD551053       --> ..................................................
FD947036       --> ..................................................
FD961864       --> ..................................................
EX771838       --> ..................................................
EX748031       --> ..................................................
EW723930       --> ..................................................
FY454583       --> ..................................................
EX749345       --> ..................................................
EV541176       --> ACAACAAAACCTCTTCAAACGCTTTCAACGCCAAAGGCAGCTCCTTCTTC
EV542069       --> ACAACAAAACCTCTTCAAACGCTTTCAACGCCAAAGGCAGCTCCTTCTTC

               800    -    850
UN19608        --> TTCTCGTAAGCATCTCCAAGGTTGTTCCAAGCCGTTACATAA-CCAGGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD546926       <-- ..................................................
FD943046       <-- ..................................................
FD958540       <-- ..................................................
EX775921       <-- ..................................................
EX752087       <-- ..................................................
EW727997       <-- ..................................................
EV536812       <-- TTCTCGTAAGCATCTCCAAGGTTGTTCCAAGCCGTTACATAA-CCAGGCT
EV537942       <-- TTCTCGTAAGCATCTCCAAGGTTGTTCCAAGCCGTTACATAAACCAGGCT
FD551053       --> ..................................................
FD947036       --> ..................................................
FD961864       --> ..................................................
EX771838       --> ..................................................
EX748031       --> ..................................................
EW723930       --> ..................................................
FY454583       --> ..................................................
EX749345       --> ..................................................
EV541176       --> TTCTCGTAAGCATCTCCAAGGTTGTTCCAAGCCGTTACATAA-CCAGGCT
EV542069       --> TTCTCGTAAGCATCTCCAAGGTTGTTCCAAGCCGTTACATAA-CCAGGCT

               850    -    900
UN19608        --> GAATCTTCACCGCC-ATCTCAAACTGAGCGATTCCTTTGTCCAGTTTGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD546926       <-- ..................................................
FD943046       <-- ..................................................
FD958540       <-- ..................................................
EX775921       <-- ..................................................
EX752087       <-- ..................................................
EW727997       <-- ..................................................
EV536812       <-- GAATCTTCACCGCC-ATCTCAAACTGAGCGATTCCTTTGTCCAGTTTGTC
EV537942       <-- GAATCTTCACCGCCCATCTCAAACTGAGCGATTCCTTTGTCCAGTTTGTC
FD551053       --> ..................................................
FD947036       --> ..................................................
FD961864       --> ..................................................
EX771838       --> ..................................................
EX748031       --> ..................................................
EW723930       --> ..................................................
FY454583       --> ..................................................
EX749345       --> ..................................................
EV541176       --> GAATCTTCACCGCC-ATCTCAAACTGAGCGATTCCTTTGTCCAGTTTGTC
EV542069       --> GAATCTTCACCGCC-ATCTCAAACTGAGCGATTCCTTTGTCCAGTTTGTC

               900    -    950
UN19608        --> CTCTCGGACGTAACTCACTCCGAGAGCGTTGTAGACCTGAGCAAGATCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD546926       <-- ..................................................
FD943046       <-- ..................................................
FD958540       <-- ..................................................
EX775921       <-- ..................................................
EX752087       <-- ..................................................
EW727997       <-- ..................................................
EV536812       <-- CTCTCGGACGTAACTCACTCCGAGAGCGTTGTAGACCTGAGCAAGATCTT
EV537942       <-- CTCTCGGACGTAACTCACTCCGAGAGCGTTGTAGACGTGAGCAAGATCTT
FD551053       --> ..................................................
FD947036       --> ..................................................
FD961864       --> ..................................................
EX771838       --> ..................................................
EX748031       --> ..................................................
EW723930       --> ..................................................
FY454583       --> ..................................................
EX749345       --> ..................................................
EV541176       --> CTCTCGGACGTAACTCACTCCGAGAGCGTTGTAGACCTGAGCAAGATCTT
EV542069       --> CTCTCGGACGTAACTCACTCCGAGAGCGTTGTAAACCTGAGCAAGATCTT

               950    -   1000
UN19608        --> GATCGTCACCGTCCC-ATTTCTGGATGGCTTGAAGCAAGAACTTGTTGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD546926       <-- ..................................................
FD943046       <-- ..................................................
FD958540       <-- ..................................................
EX775921       <-- ..................................................
EX752087       <-- ..................................................
EW727997       <-- ..................................................
EV536812       <-- GATCGTCACCGTCCC-ATTTCTGGATGGCTTGAAGCAAGAACTTGTTGGC
EV537942       <-- GATCGTCACCGTCCCCATTTCTGGATGGCTTGAAGCAAGAACTTGTTGGC
FD551053       --> ..................................................
FD947036       --> ..................................................
FD961864       --> ..................................................
EX771838       --> ..................................................
EX748031       --> ..................................................
EW723930       --> ..................................................
FY454583       --> ..................................................
EX749345       --> ..................................................
EV541176       --> GATCGTCACCGTCCC-ATTTCTGGATGGCTTGAAGCAAGAACTTGTTGGC
EV542069       --> GATCGTCACCGTCCC-ATTTCTGGATGGCTTGAAGCAAGAACTTGTTGGC

               1000   -   1050
UN19608        --> TGCTGGATAAAATTTGCGTCTCAGCATCACTGCACCGAGCTCAAAGAGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD546926       <-- ..................................................
FD943046       <-- ..................................................
FD958540       <-- ..................................................
EX775921       <-- ..................................................
EX752087       <-- ..................................................
EW727997       <-- ..................................................
EV536812       <-- TGCTGGATAAAATTTGCGTCTCAGCATCACTGCACCGAGCTCAAAGAGCT
EV537942       <-- TGCTGGATAAAATTTGCGTCTCAGCATCACTGCACCGAGCTCAAAGAGCT
FD551053       --> ..................................................
FD947036       --> ..................................................
FD961864       --> ..................................................
EX771838       --> ..................................................
EX748031       --> ..................................................
EW723930       --> ..................................................
FY454583       --> ..................................................
EX749345       --> ..................................................
EV541176       --> TGCTGGATAAAATTTGCGTCTCAGCATCACTGCACCGAGCTCAAAGAGCT
EV542069       --> TGCTGGATAAAATTTGCGTCTCAGCATCACTGCACCGAGCTCAAAGAGCT

               1050   -   1100
UN19608        --> CTGTTGCACTTGCATCCCCGCTCCTTACTTGTTCCTGTAGTTCTTTGGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD546926       <-- ..................................................
FD943046       <-- ..................................................
FD958540       <-- ..................................................
EX775921       <-- ..................................................
EX752087       <-- ..................................................
EW727997       <-- ..................................................
EV536812       <-- CTGTTGCACTTGCATCCCCGCTCCTTACTTGTTCCTGTAGTTCTTTGGCA
EV537942       <-- CTGTTGCACTTGCATCCCCGCTCCTTACTTGTTCCTGTAGTTCTTTGACA
FD551053       --> ..................................................
FD947036       --> ..................................................
FD961864       --> ..................................................
EX771838       --> ..................................................
EX748031       --> ..................................................
EW723930       --> ..................................................
FY454583       --> ..................................................
EX749345       --> ..................................................
EV541176       --> CTGTTGCACTTGCATCCCCGCTCCTTACTTGTTCCTGTAGTTCTTTGGCA
EV542069       --> CTGTTGCACTTGCATCCCCGCTCCTTACTTGTTCCTGTAGTTCTTTGACA

               1100   -   1150
UN19608        --> GAGAGGTCAAGTTCTCTGCGGACAAGTACTTGGCGGATGACATAGAAAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD546926       <-- ..................................................
FD943046       <-- ..................................................
FD958540       <-- ..................................................
EX775921       <-- ..................................................
EX752087       <-- ..................................................
EW727997       <-- ..................................................
EV536812       <-- GAGAGGTCAAGTTCTCTGCGGACAAGTACTTGGCGGATGACATAGAAAGT
EV537942       <-- GAGAGGTCAAGTTCTCTGCGGACAAGTACTTGGCGGATGACATAGAAAGT
FD551053       --> ..................................................
FD947036       --> ..................................................
FD961864       --> ..................................................
EX771838       --> ..................................................
EX748031       --> ..................................................
EW723930       --> ..................................................
FY454583       --> ..................................................
EX749345       --> ..................................................
EV541176       --> GAGAGGTCAAGTTCTCTGCGGACAAGTACTTGGCGGATGACATAGAAAGT
EV542069       --> GAGAGGTCAAGTTCTCTGCGGACAAGTACTTGGCGGATGACATAGAAAGT

               1150   -   1200
UN19608        --> ACCAACTCCGAGCAAACCAAGTAGCAACAGCAAGTAAGAAAGCTGAATCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD546926       <-- ..................................................
FD943046       <-- ..................................................
FD958540       <-- ..................................................
EX775921       <-- ..................................................
EX752087       <-- ..................................................
EW727997       <-- ..................................................
EV536812       <-- ACCAACTCCGAGCAAACCAAGTAGCAACAGCAAGTAAGAAAGCTGAATCC
EV537942       <-- ACCAACTCCGAGCAAACCAAGTAGCAACAGCAAGTAAGAAAGCTGAATCC
FD551053       --> ..................................................
FD947036       --> ..................................................
FD961864       --> ..................................................
EX771838       --> ..................................................
EX748031       --> ..................................................
EW723930       --> ..................................................
FY454583       --> ..................................................
EX749345       --> ..................................................
EV541176       --> ACCAACTCCGAGCAAACCAAGTAGCAACAGCAAGTAAGAAAGCTGAATCC
EV542069       --> ACCAACTCCGAGCAAACCAAGTAGCAACAGCAAGTAAGAAAGCTGAATCC

               1200   -   1250
UN19608        --> CTAGTTCAAACAACTCTCCAACTTCGTAAATAGGTTCAGGCTTCACGGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD546926       <-- ..................................................
FD943046       <-- ..................................................
FD958540       <-- ..................................................
EX775921       <-- ..................................................
EX752087       <-- ..................................................
EW727997       <-- ..................................................
EV536812       <-- CTAGTTCAAACAACTCTCCAACTTCGTAAATAGGTTCAGGCTTCACGGTT
EV537942       <-- CTAGTTCAAACAACTCTCCAACTTCGTAAATAGGTTCAGGCTTCACGGTT
FD551053       --> ..................................................
FD947036       --> ..................................................
FD961864       --> ..................................................
EX771838       --> ..................................................
EX748031       --> ..................................................
EW723930       --> ..................................................
FY454583       --> ..................................................
EX749345       --> ..................................................
EV541176       --> CTAGTTCAAACAACTCTCCAACTTCGTAAATAGGTTCAGGCTTCACGGTT
EV542069       --> CTAGTTCAAACAACTCTCCAACTTCGTAAATAGGTTCAGGCTTCACGGTT

               1250   -   1300
UN19608        --> TCTGACGCTGCTGCCAGCTGTGGATAAGCAGAGACCATCAACAAGCTCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD546926       <-- ..................................................
FD943046       <-- ..................................................
FD958540       <-- ..................................................
EX775921       <-- ..................................................
EX752087       <-- ..................................................
EW727997       <-- ..................................................
EV536812       <-- TCTGACGCTGCTGCCAGCTGTGGATAAGCAGAGACCATCAACAAGCTCTG
EV537942       <-- TCTGACGCTGCTGCCAGCTGTGGATAAGCAGAGACCATCAACAAGCTCTG
FD551053       --> ..................................................
FD947036       --> ..................................................
FD961864       --> ..................................................
EX771838       --> ..................................................
EX748031       --> ..................................................
EW723930       --> ..................................................
FY454583       --> ..................................................
EX749345       --> ..................................................
EV541176       --> TCTGACGCTGCTGCCAGCTGTGGATAAGCAGAGACCATCAACAAGCTCTG
EV542069       --> TCTGACGCTGCTGCCAGCTGTGGATAAGCAGAGACCATCAACAAGCTCTG

               1300   -   1350
UN19608        --> ACCCAGCAGAAAGGTAGATCCTTTGCTCGGTAGCTTCTTCAGAAGCGGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD546926       <-- ..................................................
FD943046       <-- ..................................................
FD958540       <-- ..................................................
EX775921       <-- ..................................................
EX752087       <-- ..................................................
EW727997       <-- ..................................................
EV536812       <-- ACCCAGCAGAAAGGTAGATCCTTTGCTCGGTAGCTTCTTCAGAAGCGGTA
EV537942       <-- ACCCAGCAGAAAGGTAGATCCTTTGCTCGGTAGCTTCTTCAGAAGCGGTA
FD551053       --> ..................................................
FD947036       --> ..................................................
FD961864       --> ..................................................
EX771838       --> ..................................................
EX748031       --> ..................................................
EW723930       --> ..................................................
FY454583       --> ..................................................
EX749345       --> ..................................................
EV541176       --> ACCCAGCAGAAAGGTAGATCCTTTGCTCGGTAGCTTCTTCAGAAGCGGTA
EV542069       --> ACCCAGC...........................................

               1350   -   1400
UN19608        --> AGCCTCTAGCAGCAAGTTCTGCAGATCGAAAAGCCAAAATCCTGCCATGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD546926       <-- ..................................................
FD943046       <-- ..................................................
FD958540       <-- ..................................................
EX775921       <-- ..................................................
EX752087       <-- ..................................................
EW727997       <-- ..................................................
EV536812       <-- AGCCTCTAGCAGCAAGTTCTGCAGATCGAAAAGCCAAAATCCTGCCATGT
EV537942       <-- AGCCTCTAGCAGCAAGTTCTGCAGATCGAAAAGCCAAAATCCTGCCATGT
FD551053       --> ..................................................
FD947036       --> ..................................................
FD961864       --> ..................................................
EX771838       --> ..................................................
EX748031       --> ..................................................
EW723930       --> ..................................................
FY454583       --> ..................................................
EX749345       --> ..................................................
EV541176       --> AGCCTCTAGCAGCAAGTTCTGCAGATCGAAA-GCCAAA-TCCTGCCATGT
EV542069       --> ..................................................

               1400   -   1450
UN19608        --> ATCTGTAAAGATATCGTTTTGGGATGGAGCTTGAGCGACAGAGGAGAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD546926       <-- ..................................................
FD943046       <-- ..................................................
FD958540       <-- ..................................................
EX775921       <-- ..................................................
EX752087       <-- ..................................................
EW727997       <-- ..................................................
EV536812       <-- ATCTGTAAAAATATCGTTTTGGGATGGAGCTTGAGCGACAGAGGAGAAGA
EV537942       <-- ATCTGTAAAGATATCGTTTTGGGATGGAGCTTGAGCGACAGAGGAGAAGA
FD551053       --> ..................................................
FD947036       --> ..................................................
FD961864       --> ..................................................
EX771838       --> ..................................................
EX748031       --> ..................................................
EW723930       --> ..................................................
FY454583       --> ..................................................
EX749345       --> ..................................................
EV541176       --> ATCTGT............................................
EV542069       --> ..................................................

               1450   -   1500
UN19608        --> AGGGAGAATCTGAGAGTGATGGAGATAGAGGCGGTGAATGGGAGGAGACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD546926       <-- ..................................................
FD943046       <-- ..................................................
FD958540       <-- ..................................................
EX775921       <-- ..................................................
EX752087       <-- ..................................................
EW727997       <-- ..................................................
EV536812       <-- AGGGAGAATCTGAGAGTGATGGAGATAGAGGCGGTGAATGGGAGGAGACG
EV537942       <-- AGGGAGAATCTGAGAGTGATGGAGATAGAGGCGGTGAATGGGAGGAGACG
FD551053       --> ..................................................
FD947036       --> ..................................................
FD961864       --> ..................................................
EX771838       --> ..................................................
EX748031       --> ..................................................
EW723930       --> ..................................................
FY454583       --> ..................................................
EX749345       --> ..................................................
EV541176       --> ..................................................
EV542069       --> ..................................................

               1500   -   1550
UN19608        --> ATGGAGATAGCGTATGGAGTAGCGTGCTCGATGGGATTACTCGGAAAGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD546926       <-- ..................................................
FD943046       <-- ..................................................
FD958540       <-- ..................................................
EX775921       <-- ..................................................
EX752087       <-- ..................................................
EW727997       <-- ..................................................
EV536812       <-- ATGGAGATAGCGTATGGAGTAGCATGCTCGATGGGATTACTCc.......
EV537942       <-- ATGGAGATAGCGTATGGAGTAGCGTGCTCGATGAGATTACTCGGAAAGTC
FD551053       --> ..................................................
FD947036       --> ..................................................
FD961864       --> ..................................................
EX771838       --> ..................................................
EX748031       --> ..................................................
EW723930       --> ..................................................
FY454583       --> ..................................................
EX749345       --> ..................................................
EV541176       --> ..................................................
EV542069       --> ..................................................

               1550   -   1600
UN19608        --> TGAAAA
                   ~~~~~~
FD546926       <-- ......
FD943046       <-- ......
FD958540       <-- ......
EX775921       <-- ......
EX752087       <-- ......
EW727997       <-- ......
EV536812       <-- ......
EV537942       <-- TGAAAA
FD551053       --> ......
FD947036       --> ......
FD961864       --> ......
EX771838       --> ......
EX748031       --> ......
EW723930       --> ......
FY454583       --> ......
EX749345       --> ......
EV541176       --> ......
EV542069       --> ......