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Alignment for radish unigene UN19633

               1      -     51
UN19633        --> AAAAACCCAATTCTCATCTGCGCATTATACTGTTACTTGAAACAAGAAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX898147       <-- ..................................................
EX771617       <-- ..................................................
FD948417       <-- ..................................................
EX772755       <-- ..................................................
EW723051       <-- ..................................................
EX773012       <-- ..................................................
EX775678       --> AAAAACCCAATTCTCATCTGCGCATTATACTGTTACTTGAAACAAGAAAT
EX776861       --> AAAAACCCAATTCTCATCTGCGCATTATACTGTTACTTGAAACAAGAAAT
EX776634       --> .................CTGCGCATTATACTGTTACTTGAAACAAGAAAT

               51     -    101
UN19633        --> CTCGACTTACAATCTTTTCCTGATCTATGCTACTAAGACAAAAGAGTGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX898147       <-- ..................................................
EX771617       <-- ..................................................
FD948417       <-- ..................................................
EX772755       <-- ..................................................
EW723051       <-- ..................................................
EX773012       <-- ..................................................
EX775678       --> CTCGACTTACAATCTTTTCCTGATCTATGCTACTAAGACAAAAGAGTGTT
EX776861       --> CTCGACTTACAATCTTTTCCTGATCTATGCTACTAAGACAAAAGAGTGTT
EX776634       --> CTCAACTTACAATCTTTTCCTGATCTATGCTACTAAAACAAAAGAGTGTT

               101    -    151
UN19633        --> TACATGTAGGCTTAAGCTTTGTCTTGGAAGTAATAAAGAATCTAGATGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX898147       <-- ..................................................
EX771617       <-- ..................................................
FD948417       <-- ..................................................
EX772755       <-- ..................................................
EW723051       <-- ..................................................
EX773012       <-- ..................................................
EX775678       --> TACATGTAGGCTTAAGCTTTGTCTTGGAAGTAATAAAGAATCTAGATGAA
EX776861       --> TACATGTAGGCTTAAGCTTTGTCTTGGAAGTAATAAAGAATCTAGATGAA
EX776634       --> TACATGTAGGCTTAAGCTTTGTCTTGGAAGTAATAAAGAATCTAGATGAA

               151    -    201
UN19633        --> ATCTTTAGAGGAGCAAGAGGTCACACAACTCAAATCTAGTTTCTTTAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX898147       <-- ..................................................
EX771617       <-- ..................................................
FD948417       <-- ..................................................
EX772755       <-- ..................................................
EW723051       <-- ..................................................
EX773012       <-- ..................................................
EX775678       --> ATCTTTAGAGGAGCAAGAGGTCACACAACTCAAATCTAGTTTCTTTAGAA
EX776861       --> ATCTTTAGAGGAGCAAGAGGTCACACAACTCAAATCTAGTTTCTTTAGAA
EX776634       --> ATCTTTAGAGGAGCAAGAGGTCACACAACTCAAATCTAGTTTCTTTAGAA

               201    -    251
UN19633        --> TCTTAATAGGAGCAAGAGTCTCAAACAACTCAACTCAAGGTATATGTGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX898147       <-- ..................................................
EX771617       <-- ..................................................
FD948417       <-- ..................................................
EX772755       <-- ..................................................
EW723051       <-- ..................................................
EX773012       <-- ..................................................
EX775678       --> TCTTAATAGGAGCAAGAGTCTCAAACAACTCAACTCAAGGTATATGTGTT
EX776861       --> TCTTAATAGGAGCAAGAGTCTCAAACAACTCAACTCAAGGTATATGTGTT
EX776634       --> TCTTAATAGGAGCAAGAGTCTCAAACAACTCAACTCAAGGTATATGTGTT

               251    -    301
UN19633        --> GCCATGAACTAAACAATGTACCGCCGCCACTTCTTGGTTTGTGTCCCTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX898147       <-- ..................................................
EX771617       <-- ..................................................
FD948417       <-- ..................................................
EX772755       <-- ..................................................
EW723051       <-- ..................................................
EX773012       <-- ..................................................
EX775678       --> GCCATGAACTAAACAATGTACCGCCGCCACTTCTTGGTTTGTGTCCCTTA
EX776861       --> GCCATGAACTAGACAATGTACCGCCGCCACTTCTTGGTTTGTGTCCCTTA
EX776634       --> GCCATGAACTAAACAATGTACCGCCGCCACTTCTTGGTTTGTGTCCCTTA

               301    -    351
UN19633        --> GTATCTAATTGGTCCGTCAAGGCTACCTGTAGCAAACTGTTGAACTATTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX898147       <-- ..................................................
EX771617       <-- ..................................................
FD948417       <-- ..................................................
EX772755       <-- ..................................................
EW723051       <-- ..................................................
EX773012       <-- ..................................................
EX775678       --> GTATCTAATTGGTCCGTCAAGGCTACCTGTAGCAAACTGTTGAACTATTG
EX776861       --> GTATCTAATTGGTCCGTCAAGGCTACCTGTAGCAAACTGTTGAACTATTG
EX776634       --> GTATCTAATTGGTCCGTCAAGGCTACCTGTAGCAAACTGTTGAACTATTG

               351    -    401
UN19633        --> GATTAGTTGAGGTTGTAAATTCATGAGTCATGCCTTGCCAGACGATTTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX898147       <-- ..................................................
EX771617       <-- ..................................................
FD948417       <-- ..................................................
EX772755       <-- ..................................................
EW723051       <-- ..................................................
EX773012       <-- ..................................................
EX775678       --> GATTAGTTGAGGTTGTAAATTCATGAGTCATGCCTTGCCAGACGATTTTT
EX776861       --> GATTAGTTGAGGTTGTAAATTCATGAGTCATGCCTTGCCAGACGATTTTT
EX776634       --> GATTAGTTGAGGTTGTAAATTCATGAGTCATGCCTTGCCAAACGATTTTT

               401    -    451
UN19633        --> CCTTTATACAGAAACAATAACCTGTCTACAGCTCTTTGAATGGTGCTATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX898147       <-- ..................................................
EX771617       <-- ..................................................
FD948417       <-- ..................................................
EX772755       <-- ..................................................
EW723051       <-- ..................................................
EX773012       <-- ..................................................
EX775678       --> CCTTTATACAGAAACAATAACCTGTCTACAGCTCTTTGAATGGTGCTATG
EX776861       --> CCTTTATACAGAAACAATAACCTGTCTACAGCTCTTTGAATGGTGCTATG
EX776634       --> CCTTCATACAAAAACAATAACCTGTCTACAGCTCTTTGAATGGTGCTATG

               451    -    501
UN19633        --> TTGATGGGTAACAACCAAATAAGAGGCGATCTTCCCAGGTTTCCCAAGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX898147       <-- ..................................................
EX771617       <-- ..................................................
FD948417       <-- ..................................................
EX772755       <-- ..................................................
EW723051       <-- ..................................................
EX773012       <-- ..................................................
EX775678       --> TTGATGGGTAACAACCAAATAAGAGGCGATCTTCCCAGGTTTCCCAAGTG
EX776861       --> TTGATGGGTAACAACCAAATAAGAGGCGATCTTCCCAGGTTTCCCAAGTG
EX776634       --> TTGATGGGTAACAACCAAATAAAAGGCGATCTTCCCAGGTTTCCCAAGTG

               501    -    551
UN19633        --> AATCCTCCTCCCCCGTCAAGTGAACAGATCGTATAAGATCTTCAACTACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX898147       <-- ..................................................
EX771617       <-- ..................................................
FD948417       <-- ..................................................
EX772755       <-- ..................................................
EW723051       <-- ..................................................
EX773012       <-- ..................................................
EX775678       --> AATCCTCCTCCCCCGTCAAGTGAACAGATCGTATAAGATCTTCAACTACA
EX776861       --> AATCCTCCTCCCCCGTCAAGTGAACAGATCGTATAAGATCTTCAACTACA
EX776634       --> AATCCTCCTCCCCCGTCAAGTGAACAGATCGTATAAGATCTTCAACTACA

               551    -    601
UN19633        --> GTTGATGCAATGGGATCAAGTCCAGCTGTTGGCTCATCGTACAAGAGCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX898147       <-- ..................................................
EX771617       <-- ..................................................
FD948417       <-- ..................................................
EX772755       <-- ..................................................
EW723051       <-- ..................................................
EX773012       <-- ..................................................
EX775678       --> GTTGATGCAATGGGATCAAGTCCAGCTGTTGGCTCATCGTACAAGAGCAC
EX776861       --> GTTGATGCAATGGGATCAAGTCCAGCTGTTGGCTCATCGTACAAGAGCAC
EX776634       --> GTTGATGCAATGGGATCAAGTCCAGCTGTTGGCTCATCGTACAAGAGCAC

               601    -    651
UN19633        --> CTCTGGCTCTATGACCTCCTTTGTTGTATCGAAAACAAGTGAACGAGCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX898147       <-- ............................................GAGCTA
EX771617       <-- ..................................................
FD948417       <-- ..................................................
EX772755       <-- ..................................................
EW723051       <-- ..................................................
EX773012       <-- ..................................................
EX775678       --> CTCTGGCTCTATGACCTCCTTTGTTGTATCGAAAACAAGTGAACGAGCTA
EX776861       --> CTCTGGCTCTATGACCTCCTTTGTTGTATCGAAAACAAGTGAACGAGCTA
EX776634       --> CTCTGGCTCTATGACCTCCTTTGTTGTATCGAAAACAAGTGAACGAGCTA

               651    -    701
UN19633        --> AAGCAACCCTTTTCTTCACCCCACCAGATAGCTCAGAAGGTAGTCGATTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX898147       <-- AAGCA-CCCTTTTCTTCATCCCACCAGATAGATCAGAAGGCAGTCGATTC
EX771617       <-- ...............TCACCCCACCAGATAGCTCAGAAGGTAGTCGATTC
FD948417       <-- ....................CCACCAGATAGCTCAGAAGGCAGTCGATTC
EX772755       <-- ................................................TC
EW723051       <-- ..................................................
EX773012       <-- ..................................................
EX775678       --> AAGCAACCCTTTTCTTCACCCCACCAGATAGCTCAG..............
EX776861       --> AAGCAACCCTTTTCTTCACCCCACCAGATAGCTCAGAAGGTAGTCGATTC
EX776634       --> AAGCAACCCTTTTCTTCATCCCACCAGATAGCTC................

               701    -    751
UN19633        --> TCAACACCCTTCAAACCAACAGCTGCCAAGGTCTGTGTCACAAGCTCAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX898147       <-- TCAACACCCTTCAAACCAACAGCTGCCAAGGTCTGTGTCACAAGCTCAGA
EX771617       <-- TCAACACCCTTCAAACCAACAGCTGCCAAGGTCTGTGTCACAAGCTCAGA
FD948417       <-- TCAACACCCTTCAAACCAACAGCTGCCAAGGTCTGTGTCACAAGCTCAGA
EX772755       <-- TCAACACCCTTCAAACCAACAGCTGCCAAGGTCTGTGTCACAAGCTCAGA
EW723051       <-- .......ctTTCAAACCAACAGCTGCCAAGGTCTGTGTCACAAGCTCCGA
EX773012       <-- ..................................................
EX775678       --> ..................................................
EX776861       --> TCAACACCCTTCAAACCAACAGCTGCCAAGGTCTGTGTCACAAGCTCAGA
EX776634       --> ..................................................

               751    -    801
UN19633        --> TATTTGATTCTCAGACATTTTTGAATTTTCATAGAGTAGAAAACCAACAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX898147       <-- TATTTGATTCTCAGACATTTTTGAATTTTCATAGAGTAGAAAACCAACAT
EX771617       <-- TATTTGATTCTCAGACATTTTTGAATTTTCATAGAGTAGAAAACCAACAT
FD948417       <-- TATTTGATTCTCAGACATTTTTGAATTTTCATAGAGTAGAAAACCAACAT
EX772755       <-- TATTTGATTCTCAGACATTTTTGAATTTTCATAGAGTAGAAAACCAACAT
EW723051       <-- TATTTGATTCTCAGACATTTTTGAATTTTCATAGAGTAGAAAACCAACAT
EX773012       <-- .................TTTTTGAATTTTCATAGAGTAGAAAACCAACAT
EX775678       --> ..................................................
EX776861       --> TATTTGATTCTCAGACATTTTTGA-TTTTCATAGAGTAGAAAACCAACAT
EX776634       --> ..................................................

               801    -    851
UN19633        --> TTTCACGAACTGTAAGAGAATCAAAGAGAGCTGCACTCTGAAAAACAAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX898147       <-- TTTCACGAACTGTAAGAGAATCAAAGAGAGCTGCACTCTGAAAAACAAGG
EX771617       <-- TTTCACGAACTGTAAGAGAATCAAAGAGAGCTGCACTCTGAAAAACAAGG
FD948417       <-- TTTCACGAACTGTAAGAGAATCAAAGAGAGCTGCACTCTGAAAAACAAGG
EX772755       <-- TTTCACGAACTGTAAGAGAATCAAAGAGAGCTGCACTCTGAAAAACAAGG
EW723051       <-- TTTCACGAACTGTAAGAGAATCAAAGAGAGCTGCACTATGAAAAATAAGG
EX773012       <-- TTTCACGAACTGTAAGAGAATCAAAGAGAGCTGCACACTGAAAAACAAGG
EX775678       --> ..................................................
EX776861       --> TTTCACGAACTGTA-GAG-ATCAAAGAGAGCTGCACTCTGAAAAcacgc.
EX776634       --> ..................................................

               851    -    901
UN19633        --> CCAATACGAAGCCCTGATATCTCCTCATCACTTATCAAACCAGCTCGTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX898147       <-- CCAATACGAAGCCCTGATATCTCCTCATCACTTATCAAACCAGCTCGTTT  Raphanus sativus cv Early Scarlet Globe
EX771617       <-- CCAATACGAAGCCCTGATATCTCCTCATCACTTATCAAACCAGCTCGTTT  Raphanus raphanistrum subsp. landra
FD948417       <-- CCAATACGAAGCCCTGATATCTCCTCATCACTTATCAAACCAGCTCGTTT  Raphanus sativus cv Early Scarlet Globe
EX772755       <-- CCAATACGAAGCCCTGATATCTCCTCATCACTTATCAAACCAGCTCGTTT  Raphanus raphanistrum subsp. landra
EW723051       <-- CCAATACGAAGCCCTGATATCTCCTCATCACTTATCAAACCAGCTCGTTT  Raphanus sativus cv Early Scarlet Globe
EX773012       <-- CCAATACGAAGCCCTGATATCTCCTCATCACTTATCAAACCAGCTCGTTT  Raphanus raphanistrum subsp. landra
EX775678       --> ..................................................  Raphanus raphanistrum subsp. landra
EX776861       --> ..................................................  Raphanus raphanistrum subsp. landra
EX776634       --> ..................................................  Raphanus raphanistrum subsp. landra

               901    -    951
UN19633        --> CTTTCCCTCGTATATAAACCTCTCCCTTGTCTGGAGCAAGAAGACCAGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX898147       <-- -TTTCCCTCGTATATAAACCTCTCCCTTGTCTGGAGCAAGAAGACCAGCC  Raphanus sativus cv Early Scarlet Globe
EX771617       <-- CTTTCC-TCGTATATAAACCTCTCCCTTGTCGGGAGCAAGAAGACCAGCC  Raphanus raphanistrum subsp. landra
FD948417       <-- -TTTCCCTCGTATATAAACCTCTCCCTTGTCTGGAGCAAGAAGACCAGCC  Raphanus sativus cv Early Scarlet Globe
EX772755       <-- CTTTCC-TCGTATATAAACCTCTCCCTTGTCGGGAGCAAGAAGACCAGCC  Raphanus raphanistrum subsp. landra
EW723051       <-- -TTTCCCTCGTATATAAACCTCTCCCTTGTCTGGAGCAAGAAGACCAGCC  Raphanus sativus cv Early Scarlet Globe
EX773012       <-- CTTTCC-TCGTATATAAACCTCTCCCTTGTCGGGAGCAAGAAGACCAGCC  Raphanus raphanistrum subsp. landra
EX775678       --> ..................................................  Raphanus raphanistrum subsp. landra
EX776861       --> ..................................................  Raphanus raphanistrum subsp. landra
EX776634       --> ..................................................  Raphanus raphanistrum subsp. landra

               951    -   1001
UN19633        --> ATGATCTTTAAAATGGTTGATTTTCCAGTCCCAGAAGGACCAATCACCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX898147       <-- ATGATCTTTAAAATGGTTGATTTTCCAGTCCCAGAAGGACCAATCACCCC
EX771617       <-- ATGATCTTTAAAATGGTTGATTTTCCAGTCCCAGAAGGACCAATCACCCC
FD948417       <-- ATGATCTTTAAAATGGTTGATTTTCCAGTCCCAGAAGGACCAATCACCCC
EX772755       <-- ATGATCTTTAAAATGGTTGATTTTCCAGTCCCAGAAGGACCAATCACCCC
EW723051       <-- ATGATCTTTAAAATGGTTGATTTTCCAGTCCCAGAAGGACCAATCACCCC
EX773012       <-- ATGATCTTTAAAATGGTTGATTTTCCAGTCCCAGAAGGACCAATCACCCC
EX775678       --> ..................................................
EX776861       --> ..................................................
EX776634       --> ..................................................

               1001   -   1051
UN19633        --> AACAGCTTCGCCATGTCTAATCTTAAAGGAAACACCTTTCAAGATATGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX898147       <-- AACAGCTTCCCCATGTCTAATCTTAAAGGAAACACCTTTCAAGATATGTT  Raphanus sativus cv Early Scarlet Globe
EX771617       <-- AACAGCTTCGCCATGTCTAATCTTAAAGGAAACACCTTTCAAGATATGTT  Raphanus raphanistrum subsp. landra
FD948417       <-- AACAGCTTCCCCATGTCTAATCTTAAAGGAAACACCTTTCAAGATATGTT  Raphanus sativus cv Early Scarlet Globe
EX772755       <-- AACAGCTTCGCCATGTCTAATCTTAAAGGAAACACCTTTCAAGATATGTC  Raphanus raphanistrum subsp. landra
EW723051       <-- AACAGCTTCCCCATGTCTAATCTTAAAGGAAACACCTTTCAAGATATGTT  Raphanus sativus cv Early Scarlet Globe
EX773012       <-- AACAGCTTCGCCATGTCTAATCTTAAAGGAAACACCTTTCAAGATATGTT  Raphanus raphanistrum subsp. landra
EX775678       --> ..................................................  Raphanus raphanistrum subsp. landra
EX776861       --> ..................................................  Raphanus raphanistrum subsp. landra
EX776634       --> ..................................................  Raphanus raphanistrum subsp. landra

               1051   -   1101
UN19633        --> TATCCCCAAATGATTTGTAGACATCTCGACATTCTATTAGAACATCAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX898147       <-- TATCCCCAAATGATTTGTAGACATCTCGACATTCTATTAGAACATCAGAA  Raphanus sativus cv Early Scarlet Globe
EX771617       <-- TATCCCCAAATGATTTGTAGACATCACGACATTCTATTAGAACATCAGAA  Raphanus raphanistrum subsp. landra
FD948417       <-- TATCCCCAAATGATTTGTAGACATCTCGACATTCTATTAGAACATCAGAA  Raphanus sativus cv Early Scarlet Globe
EX772755       <-- TATCCCCAAATGATTTGTAGACATCACGACATTCTATTAGAACATCAGAA  Raphanus raphanistrum subsp. landra
EW723051       <-- TATCCCCAAATGATTTGTAGACATCTCGACATTCTATTAGAACATCAGAA  Raphanus sativus cv Early Scarlet Globe
EX773012       <-- TATCCCCAAATGATTTGTAGACATCACGACATTCTATTAGAACATCAGAA  Raphanus raphanistrum subsp. landra
EX775678       --> ..................................................  Raphanus raphanistrum subsp. landra
EX776861       --> ..................................................  Raphanus raphanistrum subsp. landra
EX776634       --> ..................................................  Raphanus raphanistrum subsp. landra

               1101   -   1151
UN19633        --> TCATCCCCAGGCTCACGCAAACCTCCTCCTGACTTTGATAGACTATTGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX898147       <-- TCATCCCCAGGCTCACGCAAACCTCCTCCTGACTTTGATAGACTATTGAA
EX771617       <-- TCATCCCCAGGCTCACGCAAACCTCCTCCTGACTTTGATAGACTATTGAA
FD948417       <-- TCATCCCCAGGCTCACGCAAACCTCCTCCTGACTTTGATAGACTATTGAA
EX772755       <-- TCATCCCCAGGCTCACGCAAACCTCCTCCTGACTTTGATAGACTATTGAA
EW723051       <-- TCATCCCCAGGCTCACGCAAACCTCCTCCTGACTTTGATAGACTATTGAA
EX773012       <-- TCATCCCCAGGCTCACGCAAACCTCCTCCTGACTTTGATAGACTATTGAA
EX775678       --> ..................................................
EX776861       --> ..................................................
EX776634       --> ..................................................

               1151   -   1201
UN19633        --> TTTGGTGGCGGTGGAACAGCAAAAGACTTTCCGACTAATACTTCTTCTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX898147       <-- TTTGGTGGCGGTGGAACAGCAAAAGACTTTCCGACTAATACTTCTTCTTC  Raphanus sativus cv Early Scarlet Globe
EX771617       <-- TTTGGTGGCGATGGAAAAGCAAAAGACTTTCCGACTAATACTTCTTCTTC  Raphanus raphanistrum subsp. landra
FD948417       <-- TTTGGTGGCGGTGGAACAGCAAAAGACTTTCCGACTAATACTTCTTCTTC  Raphanus sativus cv Early Scarlet Globe
EX772755       <-- TTTGGTGGCGGTGGAAAAGCAAAAGACTTTCCGACTAATACTTCTTCTTC  Raphanus raphanistrum subsp. landra
EW723051       <-- TTTGGTGGCGGTGGAACAGCAAAAGACTTTCCGACTAATACTTCTTCTTC  Raphanus sativus cv Early Scarlet Globe
EX773012       <-- TTTGGTGGCGATGGAAAAGCAAAAGACTTTCCGACTAATACTTCTTCTTC  Raphanus raphanistrum subsp. landra
EX775678       --> ..................................................  Raphanus raphanistrum subsp. landra
EX776861       --> ..................................................  Raphanus raphanistrum subsp. landra
EX776634       --> ..................................................  Raphanus raphanistrum subsp. landra

               1201   -   1251
UN19633        --> TGGACATAGCGATGGATTGGTGGGAAGAAGCATGGAAGTGTAAACTTGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX898147       <-- TGGACATAGCGATGGATTGGTGGGAAGAAGAATGGAAGTGTAAACTTGGA  Raphanus sativus cv Early Scarlet Globe
EX771617       <-- TGGACATAGCGATGGATTGGTGGGAAGAAGCATGGAAGTGTAAACTTGGA  Raphanus raphanistrum subsp. landra
FD948417       <-- TGGACATAGCGATGGATTGGTGGGAAGAAGAATGGAAGTGTAAACTTGGA  Raphanus sativus cv Early Scarlet Globe
EX772755       <-- TGGACATAGCGATGGATTGGTGGGAAGAAGCATGGAAGTGTAAACTTGGA  Raphanus raphanistrum subsp. landra
EW723051       <-- TGGACATAGCGATGGATTGGTGGGAAGAAGAATGGAAGTGTAAACTTGGA  Raphanus sativus cv Early Scarlet Globe
EX773012       <-- TGGACATAGCGATGGATTGGTGGGAAGAAGCATGGAAGTGTAAACTTGGA  Raphanus raphanistrum subsp. landra
EX775678       --> ..................................................  Raphanus raphanistrum subsp. landra
EX776861       --> ..................................................  Raphanus raphanistrum subsp. landra
EX776634       --> ..................................................  Raphanus raphanistrum subsp. landra

               1251   -   1301
UN19633        --> CGAAGCAAAGAAGAAGAAGAGGATAAAGAAAGCATGATTCT-GGGGGGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX898147       <-- CGAAGCAAAGAAGAAGAAGAGGATAAAGAAAGCATGATTCT-GGGGGGTT
EX771617       <-- CGAAGCA...........................................
FD948417       <-- CGAAGCAAAGAAGAAGAAGAGGATAAAGAAAGCATGATTCT-GGGGGGTT
EX772755       <-- CGAAGCAAAGAAGAA---GAGGATAAAGAAAGCATGATTCTTGGGGGGTT
EW723051       <-- CGAAGCAAAGAAGAAGAAGAGGATAAAGAAAGCATGATTCT-GGGGGGTT
EX773012       <-- CGAAGCA...........................................
EX775678       --> ..................................................
EX776861       --> ..................................................
EX776634       --> ..................................................

               1301   -   1351
UN19633        --> TGAGATCTTTGAAGAATGGGATCGAAGATGCACCAATTCGGTGCCGATTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX898147       <-- TGAGATCTTTGAAGAATGGGATCGAAGATGCACCAATTCGGTGCCGATTT
EX771617       <-- ..................................................
FD948417       <-- TGAGATCTTTGAAGAATGGGATCGAAGATGCACCAATTCGGTGCCGATTT
EX772755       <-- TGAGATCTTTGAAGAATGGGATCGAAGATGCACCAATTCGGTGCCGATTT
EW723051       <-- TGAGATCTTTGAAGAATGGGATCGAAGATGCACCAATTCGGTGCCGATTT
EX773012       <-- ..................................................
EX775678       --> ..................................................
EX776861       --> ..................................................
EX776634       --> ..................................................

               1351   -   1401
UN19633        --> GGAGAAATTGACACAGAAGAATCCAAAGTGTGGGCTTTGCAGCGTCACAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX898147       <-- GGAGAAATTGACACAGAAGAATCCc.........................
EX771617       <-- ..................................................
FD948417       <-- GGAGAAATTGACACAGAAGAATCCgc........................
EX772755       <-- GGAGAAATTGACACAGAAGAATCAAAAGTGTGGGCTTTcc..........
EW723051       <-- GGAGAAATTGACACAGAAGAATCAAAAGTGTGGCCTTTGCAGCGTCACAC
EX773012       <-- ..................................................
EX775678       --> ..................................................
EX776861       --> ..................................................
EX776634       --> ..................................................

               1401   -   1451
UN19633        --> TTCTTTGCTGGGAAATATTAGCTTTTTTTTTTCTGCTTCCCTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX898147       <-- ............................................
EX771617       <-- ............................................
FD948417       <-- ............................................
EX772755       <-- ............................................
EW723051       <-- TTCTTTGCTGGGAAATATTAGCTTTTTTTTTTCTGCTTCCCTCC
EX773012       <-- ............................................
EX775678       --> ............................................
EX776861       --> ............................................
EX776634       --> ............................................