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Alignment for radish unigene UN19678

               1      -     51
UN19678        --> GGGGCTAGTCAACAATGTCGACCAAACTTTTCTAATTCTAGAAAGTAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728714       <-- ..................................................
FD984160       <-- ..................................................
FD976599       <-- ..................................................
FD950663       <-- ..................................................
FD956895       --> GGGGCTAGTCAACAATGTCGACCAAACTTTTCTAATTCTAGAAAGTAACA
FD954392       --> ..................................................
FD980755       --> ..................................................
EW723520       --> ..................................................
FD988235       --> ..................................................

               51     -    101
UN19678        --> CAAAGCTTCTTCCTCTTCTTTATTCTTTTTTCATATAAATGCATTACTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728714       <-- ..................................................
FD984160       <-- ..................................................
FD976599       <-- ..................................................
FD950663       <-- ..................................................
FD956895       --> CAAAGCTTCTTCCTCTTCTTTATTCTTTTTTCATATAAATGCATTACTAT
FD954392       --> ..................................................
FD980755       --> ..................................................
EW723520       --> ..................................................
FD988235       --> ..................................................

               101    -    151
UN19678        --> TTTTGACCACTCCACGTTCTTGGTGGAGCGCGCATTACACACTGCGTCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728714       <-- ..................................................
FD984160       <-- ..................................................
FD976599       <-- ..................................................
FD950663       <-- ..................................................
FD956895       --> TTTTGACCACTCCACGTTCTTGGTGGAGCGCGCATTACACACTGCGTCAG
FD954392       --> ...........................ggGCGCATTACACACTGCGTCAG
FD980755       --> ..................................................
EW723520       --> ..................................................
FD988235       --> ..................................................

               151    -    201
UN19678        --> AATCGAATCTCACGCGTCTTTTCTTT-AGCTTTTAGTTCTTCGAGCCCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728714       <-- ..................................................
FD984160       <-- ..................................................
FD976599       <-- ..................................................
FD950663       <-- ..................................................
FD956895       --> AATCGAATCTCACGCGTCTTTTCTTT-AGCTTTTAATTCTTCGAGCCCAC
FD954392       --> AATCGAATCTCACGCGTCTTTTCTTTTAGCTTTTAGTTCTTCGAGCCCAC
FD980755       --> ..................................................
EW723520       --> ..................................................
FD988235       --> ..................................................

               201    -    251
UN19678        --> AAGAATCCCATATCCGATTCGTGGGTCCATCCTTACAGATGTGGTCGGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728714       <-- ..................................................
FD984160       <-- ..................................................
FD976599       <-- ..................................................
FD950663       <-- ..................................................
FD956895       --> AAGAATCCCATATCCGATTCGTGGGTCCATCCTTACAGATGTGGTCGGTG
FD954392       --> AAGAATCCCATATCCGATTCGTGGGTCCATCCTCACAGATGTGGTCAGTG
FD980755       --> .......ggATATCCGATTCGTGGGTCCATCCTTACAGATGTGGTCGGTG
EW723520       --> .........ggATCCGATTCGTGGGTCCATCCTTACAGATGTGGTCGGTG
FD988235       --> ..................................................

               251    -    301
UN19678        --> GTGGGTGGTTTGAGGCGTACGGCGTTTTCCGCCGTGAGTAAAGGTTCTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728714       <-- ..................................................
FD984160       <-- ..................................................
FD976599       <-- ..................................................
FD950663       <-- ..................................................
FD956895       --> GTGGGTGGTTTGAGGCGTACGGCGTTTTCCGCCGTGAGTAAAGGTTCTCC
FD954392       --> GTGGGTGGTTTGAGGCGTACGGCGTTTTCCGCCGTGAGTAAAGGTTCTCC
FD980755       --> GTGGGTGGTTTGAGGCGTACGGCGTTTTCCGCCGTGAGTAAAGGTTCTCC
EW723520       --> GTGGGTGGTTTGAGGCGTACGGCGTTTTCCGCCGTGAGTAAAGGTTCTCC
FD988235       --> ..................................................

               301    -    351
UN19678        --> GACAAGGTCATTGCTCGGCGGTGGTTACAGATGTCTGACCGTCGAACCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728714       <-- ..................................................
FD984160       <-- ..................................................
FD976599       <-- ..................................................
FD950663       <-- ..................................................
FD956895       --> GACAAGGTCATTGCTCGGCGGTGGTTACAGATGTCTGACCGTCGAACCAA
FD954392       --> GACAAGGTCATTGCTCGGCGGTGGTTACAGATGTCTGACCGTCGAACCAA
FD980755       --> GATAAGGTCATTGCTCGGCGGTGGTTACAGATGTCTGACCGTCGAACCAA
EW723520       --> GACAAGGTCATTGCTCGGCGGTGGTTACAGATGTCTGACCGTCGAACCAA
FD988235       --> ..................................................

               351    -    401
UN19678        --> CAACGGAGAAGGGGGAGGAGATAACTGTAACGGAAGCGAAGAAGCTAATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728714       <-- ..................................................
FD984160       <-- ..................................................
FD976599       <-- ..................................................
FD950663       <-- ..................................................
FD956895       --> CAACGGAGAAGGGGGAGGAGATAACTGTAACGGAAGCGAAGAAGCTAATG
FD954392       --> CAACGGAGAAGGGGGAGGAGATAACTGTAACGGAAGCGAAGAAGCTAATG
FD980755       --> CAACGGAGAAGGGGGAGGAGATAACTGTAACGGAAGCGAAGAAGCTAATG
EW723520       --> CAACGGAGAAGGGGGAGGAGATAACAGTAACGGAAGCGAAGAAGCTAATG
FD988235       --> ..................................................

               401    -    451
UN19678        --> AGGTTAGTGAATGTTGATGAGATGAAGAAGAAGCTCGGTTGTATGGGGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728714       <-- ..................................................
FD984160       <-- ..................................................
FD976599       <-- ..................................................
FD950663       <-- ..................................................
FD956895       --> AGGTTAGTGAATGTTGATGAGATGAAGAAGAAGCTCGGTTGTATGGGGAA
FD954392       --> AGGTTAGTGAATGTTGATGAGATGAAGAAGAAGCTCGGTTGTATGGGGAA
FD980755       --> AGGTTAGTGAATGTTGATGAGATGAAGAAGAAGCTCGGTTGTATGGGGAA
EW723520       --> AGGTTAGTGAATGTTGATGAGATGAAGAAGAAGCTCGGTTGTATGGGGAA
FD988235       --> ..................................................

               451    -    501
UN19678        --> TGAAGAAACTGTCTCTTACACTAAACTCATTGAAGCATCTCAAGGTTTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728714       <-- ..................................................
FD984160       <-- ..................................................
FD976599       <-- ..................................................
FD950663       <-- ..................................................
FD956895       --> TGAAGAAACTGTCTCTTACACTAAACTCATTGAAGCATCTCAAGGTTTAG
FD954392       --> TGAAGAAACTGTCTCTTACACTAAACACATTGAAGCATCTCAAGGTTTAG
FD980755       --> CGAAGAAACTGTCTCTTACACTAAACTCGTTGAAGCGTCTCAAGGTTTAG
EW723520       --> TGAAGAAACTGTCTCTTACACTAAACTCATTGAAGCATCTCAAGGTTTAG
FD988235       --> ..................................................

               501    -    551
UN19678        --> GTATCGCTAGATCTCTCCACGAAGCTCACGCCTTCGCTCGTATTCTCGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728714       <-- ...................................GCTCGTATTCTCGAT
FD984160       <-- ..................................................
FD976599       <-- ..................................................
FD950663       <-- ..................................................
FD956895       --> GTATCGCTAGATCTCTCCACGAAGCTCACGCCTTCGCTCGTATTCTCGAT
FD954392       --> GTATCGCTAGATCTCTCCACGAAGCTCACGCCTTCGCTCGTATTCTCGAT
FD980755       --> GTATCGCTAGATCTCTCCACGAAGCTCACGCCTTCGCTCGTGTACTCGAT
EW723520       --> GTATCGCTAGATCTCTCCACGAAGCTCACGCCTTCGCTCGTATTCTCGAT
FD988235       --> ..................................................

               551    -    601
UN19678        --> GATGCTGGTGTGATTTTAATTTTCCGTGATAAAGTCTATCTTCATCCTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728714       <-- GATGCTGGTGTGATTTTAATTTTCCGTGATAAAGTCTATCTTCATCCTCA
FD984160       <-- .......GTGTGATTTTGATTTTCCGTGATAAAGTCTATCTTCATCCTCA
FD976599       <-- .................................................A
FD950663       <-- ..................................................
FD956895       --> GACGCCGGTGTGATTTTAATTTTCCGTGATAAAGTCTATCTTCATCCTCA
FD954392       --> GATGCTGGTGTGATTTTAATTTTCCGTGATAAAGTCTATCTTCATCCTCA
FD980755       --> GATGCTGGTGTGATTTTAATTTTCCGTGATAAAGTCTATCTTCATCCTGA
EW723520       --> GATGCTGGTGTGATTTTAATTTTCCGTGATAAAGTCTATCTTCATCCTCA
FD988235       --> .......GTGTGATTTTGATTTTCCGTGATAAAGTCTATCTTCATCCTCA

               601    -    651
UN19678        --> TAAGGTGGTGGAGTTGATTAGAAAGGCAGTGCCTTTAGGTTTAAATCTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728714       <-- TAAGGTGGTGGAGTTGATTAGAAAGGCAGTGCCTTTAGGTTTAAATCTAG
FD984160       <-- TAAGGTGGTGGAGTTGATTAGAAAGGCAGTGCCTTTAGGTTTAAATCTAG
FD976599       <-- TAAGGTGGTGGAGTTGATTAGAAAGGCAGTGCCTTTAGGTTTAAATCCAG
FD950663       <-- ..................................................
FD956895       --> TAAAGTGGTGGAGTTGATTAGAAAGGCAGTGCCTTTAG-TTTAAATCTAG
FD954392       --> TAAGGTGGTGGAGTTGATTAGAAAGGCAGTGCCTTTAGGTTTAAATCTAG
FD980755       --> TAAGGTGGTGGAGTTGATTAGAAAGGCAGTGCCTTTAGGTTTAAATCCAG
EW723520       --> TAAGGTGGTGGAGTTGATTAGAAAGGCAGTGCCTTTAGGTTTAAATCTAG
FD988235       --> TAAGGTGGTGGAGTTGATTAGAAAGGCAGTGCCTTTAGGTTTAAATCTAG

               651    -    701
UN19678        --> AGGATGATCCAGCTAAAGTCGAGTTCGATAAGCTTAGGAGAATGAAGGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728714       <-- AGGATGATCCAGCTAAAGTCGAGTTCGATAAGCTTAGGAGAATGAAGGAA
FD984160       <-- AGGATGATCCAGCGAAAGTCGAGTTCGATAAGCTTAGGAGAATGAAGGAA
FD976599       <-- AGGATGATCCGGCTAAAGTGGAGTTCGATAAGCTTAGGAGAATGAAGGAA
FD950663       <-- ..................................................
FD956895       --> AGGATGATCCAGCTAAAGTCGAGTTCGATAAGC.................
FD954392       --> AGGATGATCCAGCTAAAGTCGAGTTCGATAAGCTTAGGAGAATGAAGGAA
FD980755       --> AGGATGATCCGGCTAAAGTGGAGTTCGATAAGCTTAGGAGAATGAAGGAA
EW723520       --> AGGATGATCCAGCTAAAGTCGAGTTCGATAAGCTTAGGAGAATGAAGGAA
FD988235       --> AGGATGATCCAGCGAAAGTCGAGTTCGATAAGCTTAGGAGAATGAAGGAA

               701    -    751
UN19678        --> GAGATTGATGTGTTAGCACATAAGCAAGTGAGGAAGATTCTGTGGTGTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728714       <-- GAGATTGATGTGTTAGCGCATAAGCAAGTGAGGAAGATTCTGTGGTGTGG  Raphanus sativus cv Early Scarlet Globe
FD984160       <-- GAGATTGATGTGTTAGCACATAAGCAAGTGAGGAAGATTCTGTGGTGTGG  Raphanus raphanistrum subsp. landra
FD976599       <-- GAGATTGATGTGTTAGCACATAAGCAAGTGAGGAAGATTCTGTGGTGTGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD950663       <-- ..........................................TGGTGTGG  Raphanus sativus cv Rat-Tail Radish #3870
FD956895       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD954392       --> GAGATTGATGTGTTAGCGCATAAGCAAGTGAGGAAGATTCTGTGGTGTGG  Raphanus sativus cv Rat-Tail Radish #3870
FD980755       --> GAGATTGATGTGTTAGCACATAAGCAAGTGAGGAAGATTCTGTGGTGTGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW723520       --> GAGATTGATGTGTTAGCGCATAAGCAAGTGAGGAAGATTCTGTGGTGTGG  Raphanus sativus cv Early Scarlet Globe
FD988235       --> GAGATTGATGTGTTAGCACATAAGCAAGTGAGGAAGATTCTGTGGTGTGG  Raphanus raphanistrum subsp. landra

               751    -    801
UN19678        --> TCTTGGTTACTCTGTGGTTCAGATCGGTCTGTTTTTCAGGCTAACTTTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728714       <-- TCTTGGTTACTCTGTGGTTCAGATCGGTCTGTTTTTCAGGCTAACTTTCT
FD984160       <-- TCTTGGTTACTCTGTGGTTCAGATCGGTCTGTTTTTCAGGCTAACTTTCT
FD976599       <-- TCTTGGTTACTCTGTGGTTCAGATCGGTCTGTTTTTCAGGCTAACTTTCT
FD950663       <-- TCTTGGTTACTCTGTGGTTCAGATCGGTCTGTTTTTCAGGCTAACTTTCT
FD956895       --> ..................................................
FD954392       --> TCTTGGTTACTCTGTGGTTCAGATCGGTCTGTTTTTCAG-CTAACTTTCT
FD980755       --> TCTTGGTTACTCTGTGGTTCAGATCGGTCTGTTTTTCAGGCTAACTTTCT
EW723520       --> TCTTGGTTACTCTGTGGTTCAGATCGGTCTGTTTTTCAGGCTAACTTTCT
FD988235       --> TCTTGGTTACTCTGTGGTTCAGATCGGTCTGTTTTTCAGGCTAACTTTCT

               801    -    851
UN19678        --> GGGAGTTTTCATGGGATGTGATGGAACCCATTACGTTTTTCACTACAGCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728714       <-- GGGAGTTTTCATGGGATGTGATGGAACCCATTTCGTTTTTCACTACAGCG
FD984160       <-- GGGAGTTTTCGTGGGATGTGATGGAACCCATTACGTTTTTCACTACAGCG
FD976599       <-- GGGAGTTTTCATGGGATGTGATGGAACCCATTACGTTTTTCACTACAGCG
FD950663       <-- GGGAGTTTTCATGGGATGTGATGGAACCCATTACGTTTTTCACTACAGCG
FD956895       --> ..................................................
FD954392       --> GGGAGTTTTCATGGGATGTGATGGAACCCATTACGTTTTTCACTACAGCG
FD980755       --> GGGAGTTTTCATGGGATGTGATGGAACCCATTACGTTTTTCACTACAGCG
EW723520       --> GGGAGTTTTCATGGGATGTGATGGAACCCATTTCGTTTTTCACTACAGCG
FD988235       --> GGGAGTTTTCGTGGGATGTGATGGAACCCATTACGTTTTTCACTACAGCG

               851    -    901
UN19678        --> ACTGGGATTATTGTTGGTTATGCTTATTTCTTGATGACTTCGAGGGACCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728714       <-- ACTGGGATTATTGTTGGTTATGCTTATTTCTTGATGACTTCGAGGGACCC
FD984160       <-- ACTGGGATTATTGTTGGTTATGCTTATTTCTTGATGACTTCGAGGGACCC
FD976599       <-- ACTGGGATTATTGTTGGTTATGCTTATTTCTTGATGACTTCGAGGGACCC
FD950663       <-- ACTGGGATTATTGTTGGTTATGCTTATTTCTTGATGACTTCGAGGGACCC
FD956895       --> ..................................................
FD954392       --> ACTGGGATTATTGTTGGTTATGCTTATTTCTTGATGACTT..........
FD980755       --> ACTGGGATTATTGTTGGTTATGCTTATTTCTTGATGACTTCGAGGGACCC
EW723520       --> ACTGGGATTATTGTTGGTTATGCTTATTTCTTGATGACTTCGAGGGACCC
FD988235       --> ACTGGGATTATTGTTGGTTATGCTTATTTCTTGATGACTTCGAGGGACCC

               901    -    951
UN19678        --> AACTTATCAAGATTTCATGAAGAGGTTGTTTCTTTCTAGGCAGAGGAAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728714       <-- AACTTATCGAGATTTCATGAAGAGGTTGTTTCTTTCTAGGCAGAGGAAGT
FD984160       <-- AACTTATCAAGATTTCATGAAGAGGTTGTTTCTTTCTAGGCAGAGGAAGT
FD976599       <-- AACTTATCAAGATTTCATGAAGAGGTTGTTTCTTTCTAGGCAGAGGAAGT
FD950663       <-- AACTTATCAAGATTTCATGAAGAGGTTGTTTCTTTCTAGGCAGAGGAAGT
FD956895       --> ..................................................
FD954392       --> ..................................................
FD980755       --> AACTTATCAAGATTTCATGAAGAGGTTGTTTCTTT...............
EW723520       --> AACTTATCGAGATTTCATGAAGAGGTTGTTTCTTTCTAGcaga.......
FD988235       --> AACTTATCAAGATTTCATGAAGAGGTTGTTTCTTTCTAGGCAGAGGAAGT

               951    -   1001
UN19678        --> TGCTCAAGAGTCGCAACTTCGATGTTGAGAGGTTTAAGGAACTTGAGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728714       <-- TGCTCAAGAGTCGCAACTTCGATGTTGAGAGGTTTAAGGAACTTGAGAAG
FD984160       <-- TGCTCAAGACTCGCAACTTCGATGTTGAGAGGTTTAAGGAACTTGAGAAG
FD976599       <-- TGCTCAAGAGTCGCAAGTTCGATGTTGCGAGGTTTAAGGAACTTGAGAAG
FD950663       <-- TGCTCAAGAGTCGCAACTTCGATGTTGAGAGGTTTAAGGAACTTGAGAAG
FD956895       --> ..................................................
FD954392       --> ..................................................
FD980755       --> ..................................................
EW723520       --> ..................................................
FD988235       --> TGCTCAAGACTCGCAACTTCGATGTTGAGAGGTTTAAGGAACTTGAGAAG

               1001   -   1051
UN19678        --> AAGTCGTCTTGCTCTTCTTCTTCTTCCCATCACTCGTGCCACGCCAACGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728714       <-- AAGTCGTCTTGCTCTTCTTCT---TCCCATCACTCGTGCCACGCCAACGC
FD984160       <-- AAGTCGTCTTGCTCTTCTTCTTCTTCCCATCACTCGTGCCACGCCAACGC
FD976599       <-- AAGTCGTCTTGCTCTTCTTCTTCTTCCCGTCACTCGTGCCACGCCAACGC
FD950663       <-- AAGTCGTCTTGCTCTTCTTCT---TCCCATCACTCGTGCCACGCCAACGC
FD956895       --> ..................................................
FD954392       --> ..................................................
FD980755       --> ..................................................
EW723520       --> ..................................................
FD988235       --> AAGTCGTCTTGCTCTTCTTCTTCTTCCCATCACTCGTGCCACGCCAACGC

               1051   -   1101
UN19678        --> ATCGATTCGGAAATGTGTTGGGGTTGATCTTGATTTAGAGGATTCTTTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728714       <-- ATCGATTCGGAAATGTGTTGGGGTTGATCTTGATTTAGAGGATTCTTTGC
FD984160       <-- ATCGATTCGGAAATATGTTGGGGTTGATCTTGATTTAGAGGATTCTTTGC
FD976599       <-- ATCGATTCGGAAATGTGTTGGGGTTGATCTTGATTTAGAGGATTCTTTGC
FD950663       <-- ATCGATTCGGAAATGTGTTGGGGTTGATCTTGATTTAGAGGATTCTTTGC
FD956895       --> ..................................................
FD954392       --> ..................................................
FD980755       --> ..................................................
EW723520       --> ..................................................
FD988235       --> ATCGATTCGGAAATATGTTGGGGTTGATCTTGATTTAGAGGATTCTTTGC

               1101   -   1151
UN19678        --> ATAGTCGCAGGGACTGATTCACTCGGTTTCTGGTTTTCTAACCATTATTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728714       <-- ATAGTCGCAGGGACTGATTCATTCGGTTTCTGGTTTTCTAACCATTATTC
FD984160       <-- ATAGTCGCAGGGACTGATTCACTCGGTTTCTGGTTTTCTAACCATTATTC
FD976599       <-- ATAGTCGCAGGGACTGATTCACTCGGTTTCTGGTTTTCTAACCATTATTC
FD950663       <-- ATAGTCGCAGGGACTGATTCATTCGGTTTCTGGTTTTCTAACCATTATTC
FD956895       --> ..................................................
FD954392       --> ..................................................
FD980755       --> ..................................................
EW723520       --> ..................................................
FD988235       --> ATAGTCGCAGGGACTGATTCACTCGGTTTCTGGTTTTCTAACCATTATTC

               1151   -   1201
UN19678        --> ACTTTTGATTCTATATACTTGAACCAATGTTACTGGAGGTTCTTCTTCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728714       <-- ACTTTTGATTCTATATACTTGAACCAATGTCACTGGAGGTTCTTCTTCAT
FD984160       <-- ACTTTTGATTCTATATACTTGAACCAATGTTACTGGAGGTTCTTCTTCAT
FD976599       <-- ACTTTTGATTCTATATACTTGAACCAATGTTACTGGAGGTTCTTCTTCAT
FD950663       <-- ACTTTTGATTCTATATACTTGAACCAATGTCACTGGAGGTTCTTCTTCAT
FD956895       --> ..................................................
FD954392       --> ..................................................
FD980755       --> ..................................................
EW723520       --> ..................................................
FD988235       --> ACTTTTGATTCTATATACTTGAACCAATGTTACTGGAGGTTCTTCTTCAT

               1201   -   1251
UN19678        --> GTTTAATTCTTTTGGTGTTCGCAGAAAAAGGA-TCCAAATGATGTTTTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728714       <-- GTTTAATTCTTTTGGTGTTCGCAGAAAAAGGA-TCCAAATGATGTTTTAC
FD984160       <-- GTTTAATTCTTTTGGTGTTCGCAGAAAAAGGAATCCAAATGAg.......
FD976599       <-- GTTTAATTCTTTTGGTGTTCGCAGAAAAAGGA-TCCAAATGATGTTTTAC
FD950663       <-- GTTTAATTCTTTTGGTGTTCGCAGAAAAAGGA-TCCAAATGATGTTTTAC
FD956895       --> ..................................................
FD954392       --> ..................................................
FD980755       --> ..................................................
EW723520       --> ..................................................
FD988235       --> GTTTAATTCTTTTGGTGTTCGCAGAAAAA.....................

               1251   -   1301
UN19678        --> TTTTGCAAGTAGTCAATCGAGATGGATAAAGAAACTTAGGGGGGTGTATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728714       <-- TTTTGCAAGTAGTCAATCGAGATGGATAAAGAAACTTAGGGGGGTGTATT
FD984160       <-- ..................................................
FD976599       <-- TTTTGCAAGTAGTCAATCGAGATGGATAAAGAAACTT.............
FD950663       <-- TTTTGCAAGTAGTCAATCGAGATGGATAAAGAAACTTAGGGGGGTGTATT
FD956895       --> ..................................................
FD954392       --> ..................................................
FD980755       --> ..................................................
EW723520       --> ..................................................
FD988235       --> ..................................................

               1301   -   1351
UN19678        --> CAACCGAGAGTTTCAGATGATTTGTATTAAAACGATAAATTCAATGTTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728714       <-- CAACCGAGAGTTTCAGATGATTTGTATTAAAACAATAAATTCAATGTTAT
FD984160       <-- ..................................................
FD976599       <-- ..................................................
FD950663       <-- CAACCGAGAGTTTCAGATGATTTGTATTAAAACGATAAATTCAATGTTAT
FD956895       --> ..................................................
FD954392       --> ..................................................
FD980755       --> ..................................................
EW723520       --> ..................................................
FD988235       --> ..................................................

               1351   -   1401
UN19678        --> TCAAACATGAATTTTAAAAACCTATTTAAAATCTACTGTTATTGAACTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728714       <-- TCAAACATGAATTTTAAAAACCTATTTAAAATCTACTGTTATTGAACTTG
FD984160       <-- ..................................................
FD976599       <-- ..................................................
FD950663       <-- TCAAACATGAATTTTAAAAACCTATTTAAAATCTACTGTTATTGAACTTG
FD956895       --> ..................................................
FD954392       --> ..................................................
FD980755       --> ..................................................
EW723520       --> ..................................................
FD988235       --> ..................................................

               1401   -   1451
UN19678        --> ACATTTCGG
                   ~~~~~~~~~
EW728714       <-- ACATTTCGG
FD984160       <-- .........
FD976599       <-- .........
FD950663       <-- ACATTT...
FD956895       --> .........
FD954392       --> .........
FD980755       --> .........
EW723520       --> .........
FD988235       --> .........