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Alignment for radish unigene UN19689

               1      -     51
UN19689        --> AGGGGAACACAAACACATACATTTACTTATTAACCATGAAGCTTCATGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV572980       <-- ..................................................
EV540421       <-- ..................................................
EX751945       <-- ..................................................
FD537946       <-- ..................................................
EX753927       <-- ..................................................
FD975793       <-- ..................................................
FD554492       <-- ..................................................
FD959503       <-- ..................................................
EY919427       <-- ..................................................
FD963100       --> AGGGGAACACAAACACATACATTTACTTATTAACCATGAAGCTTCATGGA
FD972722       --> ....GAACACAAACACATACATTTACTTATTAACCATGAAGCTTCATGGA
EX755063       --> ..................................................
EV535844       --> ..................................................
EX747855       --> ..................................................
EV568194       --> ..................................................
EV568299       --> ..................................................
EX750490       --> ..................................................
FD979811       --> ..................................................
FD558631       --> ..................................................
EY923653       --> ..................................................

               51     -    101
UN19689        --> CTAGCCTTGATAGGTTTTCTATTTGCTGCGGCAAGTTGCAAAGCTATTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV572980       <-- ..................................................
EV540421       <-- ..................................................
EX751945       <-- ..................................................
FD537946       <-- ..................................................
EX753927       <-- ..................................................
FD975793       <-- ..................................................
FD554492       <-- ..................................................
FD959503       <-- ..................................................
EY919427       <-- ..................................................
FD963100       --> CTAGCCTTGATAGGTTTTCTATTTGCTGCGGCAAGTTGCAAAGCTATTGA
FD972722       --> CTAGCCTTGATAGGTTTTCTATTTGCTGCGGCAAGTTGCAAAGCTATTGA
EX755063       --> ..................................................
EV535844       --> ..................................................
EX747855       --> ..................................................
EV568194       --> ..................................................
EV568299       --> ..................................................
EX750490       --> ..................................................
FD979811       --> ..................................................
FD558631       --> ..................................................
EY923653       --> ..................................................

               101    -    151
UN19689        --> GGACATTAATTGTCAAGAGAACGAGCCATTCACATGTGGAAACACTGATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV572980       <-- ..................................................
EV540421       <-- ..................................................
EX751945       <-- ..................................................
FD537946       <-- ..................................................
EX753927       <-- ..................................................
FD975793       <-- ..................................................
FD554492       <-- ..................................................
FD959503       <-- ..................................................
EY919427       <-- ..................................................
FD963100       --> GGACATTAATTGTCAAGAGAACGAGCCATTCACATGTGGAAACACTGATC
FD972722       --> GGACATTAATTGTCAAGAGAACGAGCCACTCACATGTGGAAACACTGATC
EX755063       --> ..................................................
EV535844       --> ..................................................
EX747855       --> ..................................................
EV568194       --> ..................................................
EV568299       --> ..................................................
EX750490       --> ..................................................
FD979811       --> ..................................................
FD558631       --> ..................................................
EY923653       --> ..................................................

               151    -    201
UN19689        --> AGTTAAGCAGTAAAAGTTTCCCAAAAGACTTTATCTTCGGTGTTGCTTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV572980       <-- ..................................................
EV540421       <-- ..................................................
EX751945       <-- ..................................................
FD537946       <-- ..................................................
EX753927       <-- ..................................................
FD975793       <-- ..................................................
FD554492       <-- ..................................................
FD959503       <-- ..................................................
EY919427       <-- ..................................................
FD963100       --> AGTTAAGCAGTAAAAGTTTCCCAAAAGACTTTATCTTCGGTGTTGCTTCT
FD972722       --> AGTTAAGCAGTAAAAGTTTCCCAAAAGACTTTATCTTCGGTGTTGCTTCT
EX755063       --> ..................................................
EV535844       --> ..................................................
EX747855       --> ..................................................
EV568194       --> ..................................................
EV568299       --> ..................................................
EX750490       --> ..................................................
FD979811       --> ..................................................
FD558631       --> ..................................................
EY923653       --> ..................................................

               201    -    251
UN19689        --> GCTGCTTACCAGGTGGAAGGGGGCAGAGGACGTGGTCTTAACGTTTGGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV572980       <-- ..................................................
EV540421       <-- ..................................................
EX751945       <-- ..................................................
FD537946       <-- ..................................................
EX753927       <-- ..................................................
FD975793       <-- ..................................................
FD554492       <-- ..................................................
FD959503       <-- ..................................................
EY919427       <-- ..................................................
FD963100       --> GCTGCTTACCAGGTGGAAGGGGGCAGAGGACGTGGTCTTAACGTTTGGGA
FD972722       --> GCTGCTTACCAGGTGGAAGGGGGCAGAGGACGTGGTCTTAACGTTTGGGA
EX755063       --> ..................................................
EV535844       --> ..................................................
EX747855       --> ..................................................
EV568194       --> ..................................................
EV568299       --> ..................................................
EX750490       --> ..................................................
FD979811       --> ..................................................
FD558631       --> ..................................................
EY923653       --> ..................................................

               251    -    301
UN19689        --> TGGCTTCACTCACCGATACCCAGAGAAGGGAGGATCCGATCTTGGGAATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV572980       <-- ..................................................
EV540421       <-- ..................................................
EX751945       <-- ..................................................
FD537946       <-- ..................................................
EX753927       <-- ..................................................
FD975793       <-- ..................................................
FD554492       <-- ..................................................
FD959503       <-- ..................................................
EY919427       <-- ..................................................
FD963100       --> TGGCTTCACTCACCGATACCCAGAGAAGGGAGGATCCGATCTTGGGAATG
FD972722       --> TAGCTTCACTCACCGATACCCAGAGAAGGGAGGATCCGATCTTGGGAATG
EX755063       --> ..................................................
EV535844       --> ..................................................
EX747855       --> ..................................................
EV568194       --> ..................................................
EV568299       --> ..................................................
EX750490       --> ..................................................
FD979811       --> ..................................................
FD558631       --> ..................................................
EY923653       --> ..................................................

               301    -    351
UN19689        --> GAGACACTACTTGTGAGTCATATACGAGATGGCAGAAAGATATAGACATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV572980       <-- ..................................................
EV540421       <-- ..................................................
EX751945       <-- ..................................................
FD537946       <-- ..................................................
EX753927       <-- ..................................................
FD975793       <-- ..................................................
FD554492       <-- ..................................................
FD959503       <-- ..................................................
EY919427       <-- ..................................................
FD963100       --> GAGACACTACTTGTGAGTCATATACGAGATGGCAGAAAGATATAGACATC
FD972722       --> GAGACACTACTTGTGAGTCATATACGAGATGGCAGAAAGATATAGACATC
EX755063       --> ..................................................
EV535844       --> ..................................................
EX747855       --> ..................................................
EV568194       --> ..................................................
EV568299       --> ..................................................
EX750490       --> ..................................................
FD979811       --> ..................................................
FD558631       --> ..................................................
EY923653       --> ..................................................

               351    -    401
UN19689        --> ATGGACGAACTCAATGCTACTGGCTACAGATTCTCATTTGCCTGGTCAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV572980       <-- ..................................................
EV540421       <-- ..................................................
EX751945       <-- ..................................................
FD537946       <-- ..................................................
EX753927       <-- ..................................................
FD975793       <-- ..................................................
FD554492       <-- ..................................................
FD959503       <-- ..................................................
EY919427       <-- ..................................................
FD963100       --> ATGGACGAACTCAATGCTACTGGCTACAGATTCTCATTTGCCTGGTCAAG
FD972722       --> ATGGACGAACTCAATGCTACTGGCTACAGATTCTCATTTGCCTGGTCAAG
EX755063       --> ..................................................
EV535844       --> ..................................................
EX747855       --> ..................................................
EV568194       --> ..................................................
EV568299       --> ..................................................
EX750490       --> ..................................................
FD979811       --> ..................................................
FD558631       --> ..................................................
EY923653       --> ..................................................

               401    -    451
UN19689        --> AATCATTCCAAAAGGAAAGGTGAGTAGGGGAGTGAACAAAGGAGGTCTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV572980       <-- ..................................................
EV540421       <-- ..................................................
EX751945       <-- ..................................................
FD537946       <-- ..................................................
EX753927       <-- ..................................................
FD975793       <-- ..................................................
FD554492       <-- ..................................................
FD959503       <-- ..................................................
EY919427       <-- ..................................................
FD963100       --> AATCATTCCAAAAGGAAAGGTGAGTAGGGGAGTGAACAAAGGAGGTCTCG
FD972722       --> AATCATTCCAAAAGGAAAGGTGAGTAGGGGAGTGAACAAAGGAGGTCTCG
EX755063       --> ..................................................
EV535844       --> ..................................................
EX747855       --> ..................................................
EV568194       --> ..................................................
EV568299       --> ..................................................
EX750490       --> ..................................................
FD979811       --> ..................................................
FD558631       --> ..................................................
EY923653       --> ..................................................

               451    -    501
UN19689        --> AATACTACCACAAACTCATAGATGGCCTCATCGCAAAGAATGTAACCCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV572980       <-- ..................................................
EV540421       <-- ..................................................
EX751945       <-- ..................................................
FD537946       <-- ..................................................
EX753927       <-- ..................................................
FD975793       <-- ..................................................
FD554492       <-- ..................................................
FD959503       <-- ..................................................
EY919427       <-- ..................................................
FD963100       --> AATACTACCACAAACTCATAGATGGCCTCATCGCAAAGAATGTAACCCCC
FD972722       --> AATACTACCACAAACTCATAGATGGCCTCATCGCAAAGAATGTAACCCCT
EX755063       --> ..................................................
EV535844       --> ..................................................
EX747855       --> ..................................................
EV568194       --> ..................................................
EV568299       --> ..................................................
EX750490       --> ..................................................
FD979811       --> ..................................................
FD558631       --> ..................................................
EY923653       --> ..................................................

               501    -    551
UN19689        --> TTTGTTACCCTCTTCCACTGGGACCTTCCTCAAACGCTCCAAGATGAGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV572980       <-- ..................................................
EV540421       <-- ..................................................
EX751945       <-- ..................................................
FD537946       <-- ..................................................
EX753927       <-- ..................................................
FD975793       <-- ..................................................
FD554492       <-- ..................................................
FD959503       <-- ..................................................
EY919427       <-- ..................................................
FD963100       --> TTTGTTACCCTCTTCCACTGGGACCTTCCTCAAACGCTCCAAGATGAGTA
FD972722       --> TTTGTTACCCTCTTCCACTGGGACCTTCCTCAAACGCTCCAAGATGAGTA
EX755063       --> ..................................................
EV535844       --> ..................................................
EX747855       --> ..................................................
EV568194       --> ..................................................
EV568299       --> ..................................................
EX750490       --> ..................................................
FD979811       --> ..................................................
FD558631       --> ..................................................
EY923653       --> ..................................................

               551    -    601
UN19689        --> TGAAGGTTTCTTGAACCGCACCATCATAGATGACTTTAGAGATTATGCGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV572980       <-- ..................................................
EV540421       <-- ..................................................
EX751945       <-- ..................................................
FD537946       <-- ..................................................
EX753927       <-- ..................................................
FD975793       <-- ..................................................
FD554492       <-- ..................................................
FD959503       <-- ..................................................
EY919427       <-- ..................................................
FD963100       --> TGAAGGTTTCTTGAACCGCACCATCATAGATGACTTTAGAGATTATGCGG
FD972722       --> TGAAGGTTTCTTGAACCGCACCATCATAGATGACTTTAGAGACTATGCGG
EX755063       --> ..........................gAGATGACTTTAGAGATTATGCGG
EV535844       --> ..................................................
EX747855       --> ..................................................
EV568194       --> ..................................................
EV568299       --> ..................................................
EX750490       --> ..................................................
FD979811       --> ..................................................
FD558631       --> ..................................................
EY923653       --> ..................................................

               601    -    651
UN19689        --> ATCTATGTTTCAAGGAATTTGGTGGAAAGGTGAAGAACTGG-ATCACGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV572980       <-- ..................................................
EV540421       <-- ..................................................
EX751945       <-- ..................................................
FD537946       <-- ..................................................
EX753927       <-- ..................................................
FD975793       <-- ..................................................
FD554492       <-- ..................................................
FD959503       <-- ..................................................
EY919427       <-- ..................................................
FD963100       --> ATCTATGTTTCAAGGAATTTGGTGGAAAGGTGAAGAACTGGGATCACGAT
FD972722       --> ATCTATGTTTCAAGGAATTTGGTG..........................
EX755063       --> ATCTATGTTTCAAGGAATTTGGTGGAAAGGTGAAGAACTGG-ATCACGAT
EV535844       --> ............gGGAATTTGGTGGAAAGGTGAAGAACTGG-ATCACGAT
EX747855       --> ..................................................
EV568194       --> ..................................................
EV568299       --> ..................................................
EX750490       --> ..................................................
FD979811       --> ..................................................
FD558631       --> ..................................................
EY923653       --> ..................................................

               651    -    701
UN19689        --> CAACCAGCTGTACACAGTGCCTACGAGAGGCTATGCAATCGGAACAGATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV572980       <-- ..................................................
EV540421       <-- ..................................................
EX751945       <-- ..................................................
FD537946       <-- ..................................................
EX753927       <-- ..................................................
FD975793       <-- ..................................................
FD554492       <-- ..................................................
FD959503       <-- ..................................................
EY919427       <-- ..................................................
FD963100       --> CAACCAGCTGTACACAGTGCCTACGAGAGGCTATGCAATCGGA-CAGATG
FD972722       --> ..................................................
EX755063       --> CAACCAGCTGTACACAGTGCCTACGAGAGGCTATGCAATCGGAACAGATG
EV535844       --> CAACCAGCTGTACACAGTGCCTACGAGAGGCTATGCAATCGGAACAGATG
EX747855       --> ..................................................
EV568194       --> ..................................................
EV568299       --> ..................................................
EX750490       --> ..................................................
FD979811       --> ..................................................
FD558631       --> ..................................................
EY923653       --> ..................................................

               701    -    751
UN19689        --> CACCTGGTCGATGCTCTCCGGAGGTTGATGACAGATGTTACGGCGGAAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV572980       <-- ..................................................
EV540421       <-- ..................................................
EX751945       <-- ..................................................
FD537946       <-- ..................................................
EX753927       <-- ..................................................
FD975793       <-- ..................................................
FD554492       <-- ..................................................
FD959503       <-- ..................................................
EY919427       <-- ..................................................
FD963100       --> CACCTGGTCGATGCTCTCCGGAGGTTGATGACAGATGT............
FD972722       --> ..................................................
EX755063       --> CACCTGGTCGATGCTCTCCGGAGGTTGATGACAGATGTTACGGCGGAAAT
EV535844       --> CACCTGGTCGATGCTCTCCGGAGGTTGATGACAGATGTTACGGCGGAAAT
EX747855       --> ..............................gCAGATGTTACGGCGGAAAT
EV568194       --> ..................................................
EV568299       --> ..................................................
EX750490       --> ..................................................
FD979811       --> ..................................................
FD558631       --> ..................................................
EY923653       --> ..................................................

               751    -    801
UN19689        --> TCTTCAACAGAACCTTATATAGTTGCACATAACCAGCTTCTTGCTCATGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV572980       <-- ..................................................
EV540421       <-- ..................................................
EX751945       <-- ..................................................
FD537946       <-- ..................................................
EX753927       <-- ..................................................
FD975793       <-- ..................................................
FD554492       <-- ..................................................
FD959503       <-- ..................................................
EY919427       <-- ..................................................
FD963100       --> ..................................................
FD972722       --> ..................................................
EX755063       --> TCTTCAACAGAACCTTATATAGTTGCACATAACCAGCTTCTTGCTCATGC
EV535844       --> TCTTCAACAGAACCTTATATAGTTGCACATAACCAGCTTCTTGCTCATGC
EX747855       --> TCTTCAACAGAACCTTATATAGTTGCACATAACCAGCTTCTTGCTCATGC
EV568194       --> ..................................................
EV568299       --> ..................................................
EX750490       --> ..................................................
FD979811       --> ..................................................
FD558631       --> ..................................................
EY923653       --> ..................................................

               801    -    851
UN19689        --> TGCGGCGGTCGATGTTTACAGGACAAAATATAAGTTTCAAAGAGGGAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV572980       <-- ..................................................
EV540421       <-- ..................................................
EX751945       <-- ..................................................
FD537946       <-- ..................................................
EX753927       <-- ..................................................
FD975793       <-- ..................................................
FD554492       <-- ..................................................
FD959503       <-- ..................................................
EY919427       <-- ..................................................
FD963100       --> ..................................................
FD972722       --> ..................................................
EX755063       --> TGCGGCGGTCGATGTTTACAGGACAAAATATAAGTTTCAAAGAGGGAAGA
EV535844       --> TGCGGCGGTCGATGTTTACAGGACAAAATATAAGTTTCAAAGAGGGAAGA
EX747855       --> TGCGGCGGTCGATGTTTACAGGACAAAATATAAGTTCCAAAGAGGGAAGA
EV568194       --> ..........................................gGGGAAGA
EV568299       --> ..................................................
EX750490       --> ..................................................
FD979811       --> ..................................................
FD558631       --> ..................................................
EY923653       --> ..................................................

               851    -    901
UN19689        --> TCGGACCAGTGATGATAACTAGATGGTTTCTTCCATTTGATGCCACTGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV572980       <-- ..................................................
EV540421       <-- ..................................................
EX751945       <-- ..................................................
FD537946       <-- ..................................................
EX753927       <-- ..................................................
FD975793       <-- ..................................................
FD554492       <-- ..................................................
FD959503       <-- ..................................................
EY919427       <-- ..................................................
FD963100       --> ..................................................
FD972722       --> ..................................................
EX755063       --> TCGGACCAGTGACGATAACTAGATGGTTTCTTCCATTTGATGCCACTGAC
EV535844       --> TCGGACCAGTGATGATAACTAGATGGTTTCTTCCGTTTGATGCCACTGAC
EX747855       --> TCGGACCAGTGATGATAACTAGATGGTTTCTTCCATTTGATGCCACTGAC
EV568194       --> TCGGACCAGTGATGATAACTAGATGGTTTCTTCCATTTGATGCTACTGAC
EV568299       --> ..................................................
EX750490       --> ..................................................
FD979811       --> ..................................................
FD558631       --> ..................................................
EY923653       --> ..................................................

               901    -    951
UN19689        --> AAAGCCAGCAAAGATGCAGCTGATAGGATGAAAGAATTCTTCTTGGGATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV572980       <-- ..................................................
EV540421       <-- ..................................................
EX751945       <-- ..................................................
FD537946       <-- ..................................................
EX753927       <-- ..................................................
FD975793       <-- ..................................................
FD554492       <-- ..................................................
FD959503       <-- ..................................................
EY919427       <-- ..................................................
FD963100       --> ..................................................
FD972722       --> ..................................................
EX755063       --> AAAGCCAGCAAAGATGCAGCTGATAGGATGAAAGAATTCTTCTTGGGATG
EV535844       --> AAAGCCAGCAAAGATGCAGCTGATAGGATGAAAGAATTCTTCTTGGGATG
EX747855       --> AAAGCCAGCAAAGATGCAGCTGATAGGATGAAAGAATTCTTCTTGGGATG
EV568194       --> AAAGCCAGCAAAGATGCAGCTGATAGGATGAAAGAATTCTTCTTGGGATG
EV568299       --> ..................................................
EX750490       --> ..................................................
FD979811       --> ..................................................
FD558631       --> ..................................................
EY923653       --> ..................................................

               951    -   1001
UN19689        --> GTTCATGGAGCCGCTAACAAAGGGTAGATACCCAGACATCATGAGACAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV572980       <-- .................CAAAGGGTAGATACCCAGACATCATGAGACAAA
EV540421       <-- ..................................................
EX751945       <-- ..................................................
FD537946       <-- ..................................................
EX753927       <-- ..................................................
FD975793       <-- ..................................................
FD554492       <-- ..................................................
FD959503       <-- ..................................................
EY919427       <-- ..................................................
FD963100       --> ..................................................
FD972722       --> ..................................................
EX755063       --> GTTCATGGAGCCGCTAACAAAGGGTAGATACCCAGACATCATGAGACAAA
EV535844       --> GTTCATGGAGCCGCTAACAAAGGGTAGATACCCAGACATCATGAGACAAA
EX747855       --> GTTCATGGAGCCGCTAACAAAGGGTAGATACCCAGACATCATGAGACAAA
EV568194       --> GTTCATGGAGCCGCTAACAAAGGGTAGATACCCAGACATCATGAGACAAA
EV568299       --> ..................................................
EX750490       --> ..................................................
FD979811       --> ..................................................
FD558631       --> ..................................................
EY923653       --> ..................................................

               1001   -   1051
UN19689        --> TTGTGGGTAGTCGGCTTCCCAATTTCACGGAAGCAGAAGCGGAACTCGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV572980       <-- TTGTGGGTAGTCGGCTTCCCAATTTCACGGAAGCAGAAGCGGAACTCGTT  Raphanus raphanistrum subsp. landra
EV540421       <-- ...........................................ACTCGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX751945       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD537946       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX753927       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD975793       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD554492       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD959503       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY919427       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD963100       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD972722       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX755063       --> TTGTGGGTAGTCGGCTTCCCAATTTCACGGAAGCAGAAGCAGAACTCGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV535844       --> TTGTGGGTAGTCGGCTTCCCAATTTCACGGAAGCAGAAGCAGAACTCGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX747855       --> TTGTGGGTAGTCGGCTTCCCAATTTCACGGAAGCAGAAGCAGAACTCGTT  Raphanus raphanistrum subsp. maritimus
EV568194       --> TTGTGGGTAGTCGGCTTCCCAATTTCACGGAAGCAGAAGCGGAACTCGTT  Raphanus raphanistrum subsp. landra
EV568299       --> ..................................gGAAGCGGAACTCGTT  Raphanus raphanistrum subsp. landra
EX750490       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD979811       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD558631       --> ..................................................  Raphanus raphanistrum subsp. landra
EY923653       --> ..................................................  Raphanus raphanistrum subsp. landra

               1051   -   1101
UN19689        --> GCGGGTTCATATGATTTTCTTGGTCTCAATTACTACACCACTCAGTACGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV572980       <-- GCGGGTTCATATGATTTTCTTGGTCTCAATTACTACACCACTCAGTACGC
EV540421       <-- GCGGGTTCATATGATTTTCTTGGTCTCAATTACTACACCACTCAGTACGC
EX751945       <-- ................TTCTTGGTCTCAATTACTACACCACTCAGTACGC
FD537946       <-- ..................................................
EX753927       <-- ..................................................
FD975793       <-- ..................................................
FD554492       <-- ..................................................
FD959503       <-- ..................................................
EY919427       <-- ..................................................
FD963100       --> ..................................................
FD972722       --> ..................................................
EX755063       --> GCGGGTTCATATGATTTTCTTGGTCTCAATTACTACACCACTCAGTACGC
EV535844       --> GCGGGTTCATATGATTTTCTTGGTCTCAATTACTACACCACTCAGTACGC
EX747855       --> GCGGGTTCATATTATTTTCTTGGTCTCAATTACTACACCACTCAGTACGC
EV568194       --> GCGGGTTCATATGATTTTCTTGGTCTCAATTACTACACCACTCAGTACGC
EV568299       --> GCGGGTTCATATGATTTTCTTGGTCTCAATTACTACACCACTCAGTACGC
EX750490       --> ..................................................
FD979811       --> ..................................................
FD558631       --> ..................................................
EY923653       --> ..................................................

               1101   -   1151
UN19689        --> CCAGCAAAAACCTAACCCAGTTACATGGGCAAATCACACTGCCATGATGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV572980       <-- CCAGCAAAAACCTAACCCAGTTACATGGGCAAATCACACTGCCATGATGG
EV540421       <-- CCAGCAAAAACCTAACCCAGTTTCATGGGCAAATCACACTGCTATGATGG
EX751945       <-- CCAGCAAAAACCTAACCCAGTTACATGGGCAAATCACACTGCCATGATGG
FD537946       <-- ...............CCCAGTTACATGGGCAAATCACACTGCCATGATGG
EX753927       <-- ..................................................
FD975793       <-- ..................................................
FD554492       <-- ..................................................
FD959503       <-- ..................................................
EY919427       <-- ..................................................
FD963100       --> ..................................................
FD972722       --> ..................................................
EX755063       --> CCAGCAAAAACCTAACCCAGTTACATGGGCAAATCACACTGCCATGATGG
EV535844       --> CCAGCAAAAACCTAACCCAGTTTCATGGGCAAATCACACTGCTATGATGG
EX747855       --> CCAGCAAAAACCTAACCCAGTTACATGGGCAAATCACACTGCCATGATGG
EV568194       --> CCAGCAAAAACCTAACCCAGTTACATGGGCAAATCACACTGCCATGATGG
EV568299       --> CCAGCAAAAACCTAACCCAGTTACATGAGCAAATCACACTGCCATGATGG
EX750490       --> ..................................................
FD979811       --> ..................................................
FD558631       --> ..................................................
EY923653       --> ..................................................

               1151   -   1201
UN19689        --> ACCCAGGCGTAAAGCTCACATATAACAATTCACGTGGTGAAAATCTTGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV572980       <-- ACCCAGGCGTAAAGCTCACATATGACAATTCACGTGGTGAAAATCTTGGT
EV540421       <-- ACCCAGGCGTAAAGCTCACATATAACAATTCACGTGGTGAAAATCTTGGT
EX751945       <-- ACCCAGGCGTAAAGCTCACATATAACAATTCACGTGGTGAAAATCTTGGT
FD537946       <-- ACCCAGGCGTAAAGCTCACATATAACAATTCACGTGGTGAAAATCTTGGT
EX753927       <-- ......................gAACAATTCACGTGGTGAAAATCTTGGT
FD975793       <-- ...............................................GGT
FD554492       <-- ..................................................
FD959503       <-- ..................................................
EY919427       <-- ..................................................
FD963100       --> ..................................................
FD972722       --> ..................................................
EX755063       --> ACCCAGGCGTAAAGCTCACATATAACAATTCACGTGGTGAAAATCTTGGT
EV535844       --> ACCCAGGCGTAAAGCTCACATATAACAATTCACGTGGTGAAAATCTTGGT
EX747855       --> ACCCAGGCGTAAAGCTCACATATAACAATTCACGTGGTGAAAATCTTGGT
EV568194       --> ACCCAGGCGTAAAGCTCACATATGACAATTCACGTGGTGAAAATCTTGGT
EV568299       --> ACCCAGGCGTAAAGCTCACATATGACAATTCACGTGGTGAAAATCTTGGT
EX750490       --> .........................CAATTCACGTGGTGAAAATCTTGGT
FD979811       --> ...............................................GGT
FD558631       --> ..................................................
EY923653       --> ..................................................

               1201   -   1251
UN19689        --> CCACTGTTCGTAAAAGACGCAAAAAA-CGGCAATGCCTATTACTACCCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV572980       <-- CCACTGTTCGTAAAAGACGCAAAAAA-CGGCATTGCCTATTACTACCCAA
EV540421       <-- CCACTGTTCGTAAAAGACGCAAAAAA-CGGCAATGCCTATTACTACCCAA
EX751945       <-- CCACTGTTCGTAAAAGACGCAAAAAA-CGGCAATGCGTATTACTACCCAA
FD537946       <-- CCACTGTTCGTAAAAGACGCAAAAAAACGGCAATGCCTATTACTACCCAA
EX753927       <-- CCACTGTTCGTAAAAGACGCAAAAAA-CGGCAATGCCTATTACTACCCAA
FD975793       <-- CCACTGTTCGTAAAAGACGCAAAAAA-CGGCAATGCCTATTACTACCCAA
FD554492       <-- ..................................................
FD959503       <-- ..................................................
EY919427       <-- ..................................................
FD963100       --> ..................................................
FD972722       --> ..................................................
EX755063       --> CCACTGTTCGTAAAAGACGCAAAAA--CGGCAATGCCTATTACTACCCAA
EV535844       --> CCACTGTTCGTAAAAGACGCAAAAAA-CGGCAATGCCTATTACTACCCAA
EX747855       --> CCACTGTTCGTAAAAGACGCAAAAAA-CGGCAATGCGTATTACTACCCAA
EV568194       --> CCACTGTTCGTAAAAGACGCAAAAAA-CGGCATTGCCTATTACTACCCAA
EV568299       --> CCACTGTTCGTAAAAGACGCAAAAAA-CGGCAATGCCTATTACTACCCAA
EX750490       --> CCACTGTTCGTAAAAGACGCAAAAAA-CGGCAATGCCTATTACTACCCAA
FD979811       --> CCACTGTTCGTAAAAGACGCAAAAAA-CGGCAATGCCTATTACTACCCAA
FD558631       --> ..................................................
EY923653       --> ..................................................

               1251   -   1301
UN19689        --> AAGGCATTTATTACGTTATGGACTACTTCAAAACCAAATACAATAACCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV572980       <-- AAGGCATTTATTACGTTATGGACTACTTCAAAACCAAATACAATAACCCT
EV540421       <-- AAGGCATTTATTACGTTATGGACTACTTCAAAACCAAATACAATAACCCT
EX751945       <-- AAGGCATTTATTACGTTATGGACTACTTCAAAACCAAATACAATAACCCT
FD537946       <-- AAGGCATTTATTACGTTATGGACTACTTCAAAACCAAATACAATAACCCT
EX753927       <-- AAGGCATTTATTACGTTATGGACTACTTCAAAACCAAATACAATAACCCT
FD975793       <-- AAGGCATTTATTACGTTATGGACTACTTCAAAACCAAATACAATAACCCT
FD554492       <-- .............gGTTATGGACTACTTCAAAACCAAATACAATAACCCT
FD959503       <-- ..................................................
EY919427       <-- ..................................................
FD963100       --> ..................................................
FD972722       --> ..................................................
EX755063       --> AAG-CATTTATTACGTTATGGACTACTTCAAA-CC-AATAC-ATAACCCT
EV535844       --> AAGGCATTTATTACGTTATGGACTACTTCAAAACCAAATACAATAACCCT
EX747855       --> AAGGCATTTATTACGTTATGGACTACTTCAAAACCAAATACAATAACCCT
EV568194       --> AAGGCATTTATTACGTTATGGACTACTTCAAAACCAAATACAATAACCCT
EV568299       --> AAGGCATTTATTACGTTATGGACTACTTCAAAACCAAATACAATAACCCT
EX750490       --> AAGGCATTTATTACGTTATGGACTACTTCAAAACCAAATACAATAACCCT
FD979811       --> AAGGCATTTATTACGTTATGGACTACTTCAAAACCAAATACAATAACCCT
FD558631       --> .............gGTTATGGACTACTTCAAAACCAAATACAATAACCCT
EY923653       --> ..................................................

               1301   -   1351
UN19689        --> TTGATCTATATCACTGAGAACGGATTCAGTACTCCCGGTGAAGAAACCCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV572980       <-- TTGATCTATATCACTGAGAACGGATTCAGTACTCCCGGTGATGGAACCCG  Raphanus raphanistrum subsp. landra
EV540421       <-- TTGATCTATATCACTGAGAATGGATTCAGTACTCCCGGTGAAGAAACCCG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX751945       <-- TTGATCTATATCACTGAGAACGGATTCAGTACTCCCGGTGAAGAAACCCG  Raphanus raphanistrum subsp. maritimus
FD537946       <-- TTGATCTATATCACTGAGAACGGATTCAGTACTCCCGGTGAAGAAACCCG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX753927       <-- TTGATCTATATCACTGAGAACGGATTCAGTACTCCCGGTGATGAAACCCG  Raphanus raphanistrum subsp. maritimus
FD975793       <-- TTGATCTATATCACTGAGAACGGATTCAGTACTCCCGGTGAAGAAACCCG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD554492       <-- TTGATCTATATCACTGAGAACGGATTCAGTACTCCCGGTGATGAAACCCG  Raphanus raphanistrum subsp. landra
FD959503       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY919427       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD963100       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD972722       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX755063       --> TTGATCTATATCACTGAGAACGG-GTCAGTACTCC--GTGAAGAA-CCCG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV535844       --> TTGATCTATATCACTGAGAATGGATTCAGTACTCCCGGTGAAGAAACCCG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX747855       --> TTGATCTATATCACTGAGAACGGATTCAGTACTCCCGGTGAAGAAACCCG  Raphanus raphanistrum subsp. maritimus
EV568194       --> TTGATCTATATCACTGAGAACGGATTCAGTACTCCCGGTGATGGAACCCG  Raphanus raphanistrum subsp. landra
EV568299       --> TTGATCTATATCACTGAGAACGGATTCAGTACTCCCGGTGATGAAACCCG  Raphanus raphanistrum subsp. landra
EX750490       --> TTGATCTATATCACTGAGAACGGATTCAGTACTCCCGGTGATGAAACCCG  Raphanus raphanistrum subsp. maritimus
FD979811       --> TTGATCTATATCACTGAGAACGGATTCAGTACTCCCGGTGAAGAAACCCG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD558631       --> TTGATCTATATCACTGAGAACGGATTCAGTACTCCCGGTGATGAAACCCG  Raphanus raphanistrum subsp. landra
EY923653       --> ..................................................  Raphanus raphanistrum subsp. landra

               1351   -   1401
UN19689        --> TGAGGAAGCTATTGCCGATTCCAAGCGGATCGATTATCTCTGCAGTCATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV572980       <-- TGAGGAAGCTATTGCCGATTCCAAGCGGATCGATTATCTCTGCAGTCATC
EV540421       <-- TGAGGAAGCTATTGCCGATTCCAAGCGGATCGATTATCTCTGCAGTCATC
EX751945       <-- TGGGGAAGCTATTTCCGATTCCAAGCGGATCGATTATCTCTGCAGTCATC
FD537946       <-- TGAGGAAGCTATTGCCGATTCCAAGCGGATCGATTATCTCTGCAGTCATC
EX753927       <-- TGAGGAAGCTATTGCCGATTCCAAGCGGATCGATTATCTCTGCAGTCATC
FD975793       <-- TGAGGAAGCTATTGCCGATTCCAAGCGGATCGATTATCTCTGCAGTCATC
FD554492       <-- TGAGGAAGCTATTGCCGATTCCAAGCGGATCGATTATCTCTGCAGTCATC
FD959503       <-- ..................................................
EY919427       <-- ..................................................
FD963100       --> ..................................................
FD972722       --> ..................................................
EX755063       --> TGA...............................................
EV535844       --> TGAGGAAGCTATT.....................................
EX747855       --> TGGGGAAGCTATTTCCGATTCCAAGCGGATCGATTATCTCTGCAGTCATC
EV568194       --> TGAGGAAGCTATTGCCGATTCCAAGCGGATCGATTATCTCTGCAGTCATC
EV568299       --> TGAGGAAGCTATTGCCGATTCCAAGCGGATCGATTATCTCTGCAGTCATC
EX750490       --> TGAGGAAGCTATTGCCGATTCCAAGCGGATCGATTATCTCTGCAGTCATC
FD979811       --> TGAGGAAGCTATTGCCGATTCCAAGCGGATCGATTATCTCTGCAGTCATC
FD558631       --> TGAGGAAGCTATTGCCGATTCCAAGCGGATCGATTATCTCTGCAGTCATC
EY923653       --> ..................................................

               1401   -   1451
UN19689        --> TATGTTTTCTCCGTAAGGTCATCAGGGAGAAGGGTGTCAACATAAAAGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV572980       <-- TATGTTTTCTCCGTAAGGTCATCAGGGAGAAGGGTGTCAACATAAAAGGA
EV540421       <-- TATGTTTTCTCCGTAAGGTCATCAGGGAGAAGGGTGTCAACATAAAAGGA
EX751945       <-- TATGTTTTCTCCGTAAGGTCATCAGGGAAAAGGGTGTCAACATAAAAGGA
FD537946       <-- TATGTTTTCTCCGTAAGGTCATCAGGGAGAAGGGTGTCAACATAAAAGGA
EX753927       <-- TATGTTTTCTCCGTAAGGTCATCAGGGAGAAGGGTGTCAACATAAAAGGA
FD975793       <-- TATGTTTTCTCCGTAAGGTCATCAGGGAGAAGGGTGTCAACATAAAAGGA
FD554492       <-- TATGTTTTCTCCGTAAGGTCATCAGGGAGAAGGGTGTCAACATAGAAGGA
FD959503       <-- .....................................CAACATAAAAGGA
EY919427       <-- ..................................................
FD963100       --> ..................................................
FD972722       --> ..................................................
EX755063       --> ..................................................
EV535844       --> ..................................................
EX747855       --> TATGTTTTCTCCGTAAGtcat.............................
EV568194       --> TATGTTTTCTCCGTAAGGTCA.............................
EV568299       --> TATGTTTTCTCCGTAAGGTCATCAGGGAGAAGGGTGTCAACATAAAAGGA
EX750490       --> TATGTTTTCTCCGTAAGGTCATCAGGGAGAAGGGTGTCAACATAAAAGGA
FD979811       --> TATGTTTTCTCCGTAAGGTCATCAGGGAGAAGGGTGTCAACATAAAAGGA
FD558631       --> TATGTTTTCTCCGTAAGGTCATCAGGGAGAAGGGTGTCAACATAGAAGGA
EY923653       --> ..................................................

               1451   -   1501
UN19689        --> TACTTTGCATGGGCCCTTGGAGACAATTATGAATTCTGCAAAGGTTTTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV572980       <-- TACTTTGCATGGGCCCTTGGAGACAATTATGAATTCTGCAAAGGTTTTAC  Raphanus raphanistrum subsp. landra
EV540421       <-- TACTTTGCATGGGCTCTTGGAGACAATTATGAATTCTGCAAAGGTTTTAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX751945       <-- TACTTTGCATGGGCTCTTGGAGACAATTATGAATTCTGCAAAGGTTTTAC  Raphanus raphanistrum subsp. maritimus
FD537946       <-- TACTTTGCATGGGCTCTTGGAGACAATTATGAATTCTGCAAAGGTTTTAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX753927       <-- TACTTTGCATGGGCCCTTGGAGACAATTATGAATTCTGCAAAGGTTTTAC  Raphanus raphanistrum subsp. maritimus
FD975793       <-- TACTTTGCATGGGCTCTTGGAGACAATTATGAATTCTGCAAAGGTTTTAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD554492       <-- TACTTTGCATGGGCCCTTGGAGACAATTATGAATTCTGCAAAGGTTTTAC  Raphanus raphanistrum subsp. landra
FD959503       <-- TACTTTGCATGGGCCCTTGGAGACAATTATGAATTTTGCAAAGGTTTTAC  Raphanus raphanistrum subsp. maritimus
EY919427       <-- .................gGGAGACAATTATGAATTCTGCAAAGGTTTTAC  Raphanus raphanistrum subsp. landra
FD963100       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD972722       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX755063       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV535844       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX747855       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV568194       --> ..................................................  Raphanus raphanistrum subsp. landra
EV568299       --> TACTTTGCATGGGCCCTTGGAGACAATTATGAATTCTGCAAAGGTTTTAC  Raphanus raphanistrum subsp. landra
EX750490       --> TACTTTGCATGGGCCCTTGGAGACAATTATGAATTCTGCAAAGGTTTTAC  Raphanus raphanistrum subsp. maritimus
FD979811       --> TACTTTGCATGGGCTCTTGGAGACAATTATGAATTCTGCAAAGGTTTTAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD558631       --> TACTTTGCATGGGCCCTTGGAGACAATTATGAATTCTGCAAAGGTTTTAC  Raphanus raphanistrum subsp. landra
EY923653       --> .................gGGAGACAATTATGAATTCTGCAAAGGTTTTAC  Raphanus raphanistrum subsp. landra

               1501   -   1551
UN19689        --> CGTTAGATTCGGACTTAGTTACGTTAACTGGACAAACCTCGATGATAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV572980       <-- CGTTAGATTCGGACTTAGTTACGTTAACTGGACAAACCTCGATGATAGAA
EV540421       <-- CTTTAGATTCGGGCTTAGTTACGTTAACTGGACAAACCTCGATGATAGAA
EX751945       <-- CGTTAGATTCGGACTTAGTTACGTTAACTGGACAAACCTCGATGATAGAA
FD537946       <-- CGTTAGATTCGGACTTAGTTACGTTAACTGGACAAACCTCGATGATAGAA
EX753927       <-- CGTTAGATTCGGACTTAGTTACGTTAACTGGACAAACCTCGATGATAGAA
FD975793       <-- CGTTAGATTCGGACTTAGTTACGTTAACTAGACAAACCTCGATTATAGAA
FD554492       <-- CGTTAGATTCGGACTTAGTTACGTTAACTGGACAAACCTCGATGATAGAA
FD959503       <-- CGTTAGATTCGGACTTAGTTACGTTAACTGGACAAACCTCGATGATAGAA
EY919427       <-- CGTTAGATTCGGACTTAGTTACGTTAACTGGACAAACCTCGATGATAGAA
FD963100       --> ..................................................
FD972722       --> ..................................................
EX755063       --> ..................................................
EV535844       --> ..................................................
EX747855       --> ..................................................
EV568194       --> ..................................................
EV568299       --> CGTTAGATTCGGACTTAGTTACGTTAACTGGACAAACCTCGATGATAGAA
EX750490       --> CGTTAGATTCGGACTTAGTTACGTTAACTGGACAAACCTCGATGATAGAA
FD979811       --> CGTTAGATTCGGACTTAGTTACGTTAACTAGACAAACCTCGATTATAGAA
FD558631       --> CGTTAGATTCGGACTTAGTTACGTTAACTGGACAAACCTCGATGATAGAA
EY923653       --> CGTTAGATTCGGACTTAGTTACGTTAACTGGACAAACCTCGATGATAGAA

               1551   -   1601
UN19689        --> ATCTCAAAGAATCTGGCAAATGGTACCAAAGCTTTATTAACGGTACTACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV572980       <-- ATCTCAAAGAATCTGGCAAATGGTACCAAAGCTTTATTAACGGTACTACA
EV540421       <-- ATCTCAAAGAATCTGGCAAATGGTACCAAAGCTTTATTAACGGTACTACA
EX751945       <-- ATCTCAAAGAATTTGGCAAATGGTACCAAACCTTTATTAACGGTACTACA
FD537946       <-- ATCTCAAAGAATCTGGCAAATGGTACCAAAGCTTTATTAACGGTACTACA
EX753927       <-- ATCTCAAAGAATCTGGCAAATGGTACCAAAGCTTTATTAACGGTACTACA
FD975793       <-- ATCTCAAAGAATCTGGCAAATGGTACCAAAGCTTTATTAACGGTACTACA
FD554492       <-- ATCTCAAAGAATCTGGCAAATGGTACCAAAGCTTTATTAACGGTACTACA
FD959503       <-- ATTTCAA...........................................
EY919427       <-- ATCTCAAAGAATCTGGCAAATGGTACCAAAGCTTTATTAACGGTACTACA
FD963100       --> ..................................................
FD972722       --> ..................................................
EX755063       --> ..................................................
EV535844       --> ..................................................
EX747855       --> ..................................................
EV568194       --> ..................................................
EV568299       --> ATCTCAAAGAATCTGGCAAATGGTACCAAAGCTTTATTAACGGTACTACA
EX750490       --> ATCTCAAAGAATCTGGCAAATGGTACCAAAGCTTTATTAACGGTACTACA
FD979811       --> ATCTCAAAGAATCTGGCAAATGGTACCAAAGCTTTATTAACGGTACTACA
FD558631       --> ATCTCAAAGAATCTGGCAAATGGTACCAAAGCTTTATTAACGGTACTACA
EY923653       --> ATCTCAAAGAATCTGGCAAATGGTACCAAAGCTTTATTAACGGTACTACA

               1601   -   1651
UN19689        --> AAGAACCCTGCCAAACAAGATTTCCGCCGCCCAAACCTCTCATTCCAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV572980       <-- AAGAACCCTGCCAAACAAGATTTCCGCCGCCCAAACCTCTCATTCCAGAA
EV540421       <-- AAGAACCCTGCCAAACAAGATTTCCGCCGCCCAAACCTCTCATTCCAGAA
EX751945       <-- AAGAACCCTGCCAAACAAGATTTCCGCCGCCCAAACCTCTCATTCCAGAA
FD537946       <-- AAGAACCCTGCCAAACGATATTTCCGCCGCCCAAACCTCTCATTCCAGAA
EX753927       <-- AAGAACCCTGCCTAACAAGATTTCCGCCGCCCAAACCTCCCATTCCAGAA
FD975793       <-- AAGAACCCTGCCAAACAAGATTTCCGCCGCCCAAACCTCTCATTCCAGAA
FD554492       <-- AAGAACCCTGCCAAACAAGATTTCCGCCGCCCAAACCTCTCATTCCAGAA
FD959503       <-- ..................................................
EY919427       <-- AAGAACCCTGCCAAACAAGATTTCCGCCGCCCAAACCTCTCATTCCAGAA
FD963100       --> ..................................................
FD972722       --> ..................................................
EX755063       --> ..................................................
EV535844       --> ..................................................
EX747855       --> ..................................................
EV568194       --> ..................................................
EV568299       --> AAGAACCCTGCCAAACAAGATTTCCGCCGCCCAAACCTCTCATTCCAGAA
EX750490       --> AAGAACCCTGCCTAACAAGATTTCCGCCGCCCAAACCTCCCATTCCAGAA
FD979811       --> AAGAACCCTGCCAAACAAGATTTCCGCCGCCCAAACCTCTCATTCCAGAA
FD558631       --> AAGAACCCTGCCAAACAAGATTTCCGCCGCCCAAACCTCTCATTCCAGAA
EY923653       --> AAGAACCCTGCCAAACAAGATTTCCGCCGCCCAAACCTCTCATTCCAGAA

               1651   -   1701
UN19689        --> CCAGAAGAAGAAGCTCGCAGATGCATGAAACACTTTTTCCCACCATCATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV572980       <-- CCAGAAGAAGAAGCTCGCAGATGCATGAAACACTTTTTCCCACCATCATG
EV540421       <-- CCAGAAGAAGAAGCTCGCAGATGCATGAAACACTTTTTCCCACCATCATG
EX751945       <-- CCAGAACAAGAAGCTCGCAGATGCATGAAACACTTTTTCCCACCATCATG
FD537946       <-- CCAGAAGAAGAAGCTCGCAGATGCATGAAACACTTTTTCCCACCATCATG
EX753927       <-- CCAGAAGAAGAAGCTCGCAGATGCATGAAACACTTTTTCCCACCATCATG
FD975793       <-- CCAGAAGAAGAAGCTCGCAGATGCATGAAACACTTTTTCCCACCATCATG
FD554492       <-- CCAGAAGAAGAAGCTCGCAGATGCATGAAACACTTTTTCCCACCATCATG
FD959503       <-- ..................................................
EY919427       <-- CCAGAAGAAGAAGCTCGCAGATGCATGAAACACTTTTTCCCACCATCATG
FD963100       --> ..................................................
FD972722       --> ..................................................
EX755063       --> ..................................................
EV535844       --> ..................................................
EX747855       --> ..................................................
EV568194       --> ..................................................
EV568299       --> CCAGAAGAAGAAGCTCGCAGATGCATGAAACACTTTTTCCCACCATCATG
EX750490       --> CCAGAAGAAGAAGCTCGCAGATGCATGAAACACTTTTTCCCACCATCATG
FD979811       --> CCAGAAGAAGAAGCTCGCAGATGCATGAAACACTTTTTCCCACCATCATG
FD558631       --> CCAGAAGAAGAAGCTCGCAGATGCATGAAACACTTTTTCCCACCATCATG
EY923653       --> CCAGAAGAAGAAGCTCGCAGATGCATGAAACACTTTTTCCCACCATCATG

               1701   -   1751
UN19689        --> ATCATCTTCATATCTCTACTACTTGCGTCATAGATAAGGAGCTTGTTCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV572980       <-- ATCATCTTCATATCTCTACTACTTGCGTCATAGATAAGGAGCTTGTTCTA  Raphanus raphanistrum subsp. landra
EV540421       <-- ATCATCTTCATATCTCTACTACTTGCTTCATAGATAAGGAGCTTGTTCTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX751945       <-- ATCATCTTTATATCTCTACTACTTGCTTCATAGATAAGGAGCTTGTTCTA  Raphanus raphanistrum subsp. maritimus
FD537946       <-- ATCATCTTCATATCTCTACTACTTGCTTCATAGATAAGGAGCGTGTTCTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX753927       <-- ATCATCTTCATATCTCTACTACTTGCGTCATAGATAAGGAGCTTGTTCTA  Raphanus raphanistrum subsp. maritimus
FD975793       <-- ATCATCTTCATATCTCTACTACTTGCTTCATAGATAAGGAGCTTGTTCTA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD554492       <-- ATCATCTTCATATCTCTACTACTTGCGTCATAGATAAGGAGCTTGTTCTA  Raphanus raphanistrum subsp. landra
FD959503       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY919427       <-- ATCATCTTCATATCTCTACTACTTGCGTCATAGATAAGGAGCTTGTTCTA  Raphanus raphanistrum subsp. landra
FD963100       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD972722       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX755063       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV535844       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX747855       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV568194       --> ..................................................  Raphanus raphanistrum subsp. landra
EV568299       --> ATCATCTTCATATCTCTACTACTTGCGTCATAGATAAGGAGCTTGTTCTA  Raphanus raphanistrum subsp. landra
EX750490       --> ATCATCTTCATATCTCTACTACTTGCGTCATAGATAAGGAGCTTGTTCTA  Raphanus raphanistrum subsp. maritimus
FD979811       --> ATCATCTTCATATCTCTACTACTTGCTTCATAGATAAGGAGCTTGTTCTA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD558631       --> ATCATCTTCATATCTCTACTACTTGCGTCATAGATAAGGAGCTTGTTCTA  Raphanus raphanistrum subsp. landra
EY923653       --> ATCATCTTCATATCTCTACTACTTGCGTCATAGATAAGGAGCTTGTTCTA  Raphanus raphanistrum subsp. landra

               1751   -   1801
UN19689        --> TCTATATTGTACTAAATAAGTATTCCAATAAAAGATGATCATTTACTAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV572980       <-- TCTATATTGTACTAAATAAGTATTCCAATAAAAGATGATCATTTACTAt.
EV540421       <-- TCTATATTGTACTAAATAAGTATT..........................
EX751945       <-- TCTATATTGTACTAAATAAGTATTCCAATAAAAGATGATCATTTACaact
FD537946       <-- TCTATATTGTACTAAATAAGTATTCCAATAAAAGATGATCATTTACc...
EX753927       <-- TCTATATTGTACTAAATAAGTATTCCAATAAAAGATGATCATTTACTAAT
FD975793       <-- TCTATA............................................
FD554492       <-- TCTATATTGTACTAAATAAGTATTCCAATAAAAGATGATCATTTACTgt.
FD959503       <-- ..................................................
EY919427       <-- TCTATATTGTACTAAATAAGTATTCCAATAAAAGATGATCATTTACTAAT
FD963100       --> ..................................................
FD972722       --> ..................................................
EX755063       --> ..................................................
EV535844       --> ..................................................
EX747855       --> ..................................................
EV568194       --> ..................................................
EV568299       --> TCTATATTGTACTAAATAAGTATTCCAATAAAAGATGATCATTTACTAAT
EX750490       --> TCTATATTGTACTAAATAAGTATTCCAATAAAAGATGATCATTTACTAAT
FD979811       --> TCTATATTGTACTAAATAAGTAT...........................
FD558631       --> TCTATATTGTACTAAATAAGTATTCCAATAAAAGATGATCATTTACTgt.
EY923653       --> TCTATATTGTACTAAATAAGTATTCCAATAAAAGATGATCATTTACTAAT

               1801   -   1851
UN19689        --> GAATAGTTTCGTTTGAGT
                   ~~~~~~~~~~~~~~~~~~
EV572980       <-- ..................
EV540421       <-- ..................
EX751945       <-- tt................
FD537946       <-- ..................
EX753927       <-- G.................
FD975793       <-- ..................
FD554492       <-- ..................
FD959503       <-- ..................
EY919427       <-- G.................
FD963100       --> ..................
FD972722       --> ..................
EX755063       --> ..................
EV535844       --> ..................
EX747855       --> ..................
EV568194       --> ..................
EV568299       --> GAATAGTTTCGTTTGAGT
EX750490       --> G.................
FD979811       --> ..................
FD558631       --> ..................
EY923653       --> G.................